Pregenerated sensors for OLFR384 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060335Ensembl transcript IDs: ENSMUST00000072993.2, ENSMUST00000214228.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCCATCCTATCAACTAAGCAAAGCTCTCATAGGATTACAAGAATaGAATGCCAGGAGGAGTTTGGACTACATGAGTCTGCATCAGGTC | + |
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Preference number: 1 (lower is better) Translates to: GPSYQLSKALIGLQE*NARRSLDYMSLHQV Trigger: GACCTGATGCAGACTCATGTAGTCCAAACTCCTCCTGGCATTTCATTCTTGTAATCCTATGAGAGCTTTGCTTAGTTGATAGGATGGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR GCA 90 bp | TATATTTCAGTAGTCTTGTCCAGCTTAATATGGGGGCTTTTGCCTTaGATTATTGTATCCTCTTTGTCAAGTTTGGCTGTCACCTCTAGA | + |
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Preference number: 1 (lower is better) Translates to: YISVVLSSLIWGLLP*IIVSSLSSLAVTSR Trigger: TCTAGAGGTGACAGCCAAACTTGACAAAGAGGATACAATAATGCAAGGCAAAAGCCCCCATATTAAGCTGGACAAGACTACTGAAATATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR CCA 90 bp | CAGGCTGATACTAGGACAGAGATTAGCTCTCTGAAAATTGAAAGTTaGACCACATTACCAAACAAACTATATATCTCACTGAACATAGAA | + |
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Preference number: 1 (lower is better) Translates to: QADTRTEISSLKIES*TTLPNKLYISLNIE Trigger: TTCTATGTTCAGTGAGATATATAGTTTGTTTGGTAATGTGGTCCAACTTTCAATTTTCAGAGAGCTAATCTCTGTCCTAGTATCAGCCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCTGCCTGCCAGACAAGTGCTGGAGGAATGGTAGTGCAGAACTTGTGGGAGGAGCTCAGAGAACATaGGCCATCCTATCAACTAAG | + |
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Preference number: 2 (lower is better) Translates to: VSCLPDKCWRNGSAELVGGAQRT*AILSTK Trigger: CTTAGTTGATAGGATGGCCCATGTTCTCTGAGCTCC...TCCCACAAGTTCTGCACTACCATTCCTCCAGCACTTGTCTGGCAGGCAGGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR-3UTR GCA 90 bp | GTACCCTCCACTGCCCAAATAACCAGGAACCAGGGACCAGCTCAGACTCCTAGGTGGGGGCTTTTGCCTTaGATTATTGTATCCTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: VPSTAQITRNQGPAQTPRWGLLP*IIVSSL Trigger: CAAAGAGGATACAATAATGCAAGGCAAAAGCCCCCA...CCTAGGAGTCTGAGCTGGTCCCTGGTTCCTGGTTATTTGGGCAGTGGAGGGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCTGCCAGACAAGTGCTGGAGGAATGGTAGTGCAGAACTTGTGGGAGGGACCATAGGATTACAAGAATaGAATGCCAGGAGGAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: CLPDKCWRNGSAELVGGTIGLQE*NARRSL Trigger: CAAACTCCTCCTGGCATTTCATTCTTGTAATCCTAT...GGTCCCTCCCACAAGTTCTGCACTACCATTCCTCCAGCACTTGTCTGGCAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTCCTGCCTGCCAGACAAGTGCTGGAGGAATGGTAGTGCAGAACTTGTGGGAATACTAATAGATCAGTaGCTTGTCCAGTCATCATCA | + |
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Preference number: 2 (lower is better) Translates to: VSCLPDKCWRNGSAELVGILIDQ*LVQSSS Trigger: TGATGATGACTGGACAAGGCACTGATCTATTAGTAT...TCCCACAAGTTCTGCACTACCATTCCTCCAGCACTTGTCTGGCAGGCAGGACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR-3UTR CCA 90 bp | ATAACCAGGAACCAGGGACCAGCTCAGACTCCTAGGTTAAAACCAAACACGACTGGCAGTATATTAAAGTaGTTTCAGGGATACACAGCC | + |
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Preference number: 2 (lower is better) Translates to: ITRNQGPAQTPRLKPNTTGSILK*FQGYTA Trigger: GGCTGTGTATCCCTGAAACCACTTTAATATACTGCC...AGTCGTGTTTGGTTTTAACCTAGGAGTCTGAGCTGGTCCCTGGTTCCTGGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR-3UTR GCA 90 bp | ATAACCAGGAACCAGGGACCAGCTCAGACTCCTAGGTTAAAACCAAACACGACTATTACAAGAATGAAATaGCAGGAGGAGTTTGGACTA | + |
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Preference number: 2 (lower is better) Translates to: ITRNQGPAQTPRLKPNTTITRMK*QEEFGL Trigger: TAGTCCAAACTCCTCCTGGCATTTCATTCTTGTAAT...AGTCGTGTTTGGTTTTAACCTAGGAGTCTGAGCTGGTCCCTGGTTCCTGGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGTGTGTGTGTAATTTAGAGATCTCTATCATATCCCTCCCCTCAAAGAAATTGTCCAGCTTAATATaGGGGCTTTTGCCTTGCATT | + |
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Preference number: 2 (lower is better) Translates to: CVCVCNLEISIISLPSKKLSSLI*GLLPCI Trigger: AATGCAAGGCAAAAGCCCCCATATTAAGCTGGACAA...TTTCTTTGAGGGGAGGGATATGATAGAGATCTCTAAATTACACACACACACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR CAA 90 bp | TTTTGTTATATTTCAGTAGTCTTGTCCAGCTTAATATGGGGGCTTTaGCCTTGCATTATTGTATCCTCTTTGTCAAGTTTGGCTGTCACC | + |
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Preference number: 2 (lower is better) Translates to: FCYISVVLSSLIWGL*PCIIVSSLSSLAVT Trigger: GGTGACAGCCAAACTTGACAAAGAGGATACAATAATGCAAGGCAAAAGCCCCCATATTAAGCTGGACAAGACTACTGAAATATAACAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR-3UTR CCA 90 bp | CATAGAAAGATCAGGTTAGCAAGGGATGGGAGTCTCCTACATTTTAGTCTCTTTAGGGGTTGTATTACATaGCTTGGTGGTATTATATGT | + |
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Preference number: 2 (lower is better) Translates to: HRKIRLARDGSLLHFSLFRGCIT*LGGIIC Trigger: ACATATAATACCACCAAGCCATGTAATACAACCCCT...AAAGAGACTAAAATGTAGGAGACTCCCATCCCTTGCTAACCTGATCTTTCTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR CCA 72 bp | TCCACCTACAATGTGTCCTGCCTGCCAGACAAGTGCTaGAGGAATGGTAGTGCAGAACTTGTGGGAGGGACC | + |
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Preference number: 3 (lower is better) Translates to: STYNVSCLPDKC*RNGSAELVGGT Trigger: GGTCCCTCCCACAAGTTCTGCACTACCATTCCTCCAGCACTTGTCTGGCAGGCAGGACACATTGTAGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR-3UTR CAA 90 bp | GTACCCTCCACTGCCCAAATAACCAGGAACCAGGGACCAGCTCAGACTCCTAGGGGAGTGGATAAGGGGTaGTATTACATGGCTTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: VPSTAQITRNQGPAQTPRGVDKG*YYMAWW Trigger: CCACCAAGCCATGTAATACAACCCCTTATCCACTCC...CCTAGGAGTCTGAGCTGGTCCCTGGTTCCTGGTTATTTGGGCAGTGGAGGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR GCA 72 bp | AAGCTCAGTTCACAAGGGGAACTATGTACCCTCCACTaGCCAAATAACCAGGAACCAGGGACCAGCTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: KLSSQGELCTLH*PNNQEPGTSSD Trigger: GTCTGAGCTGGTCCCTGGTTCCTGGTTATTTGGGCAGTGGAGGGTACATAGTTCCCCTTGTGAACTGAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR GCA 72 bp | ATTTCCACCTACAATGTGTCCTGCCTGCCAGACAAGTaGTGGAGGAATGGTAGTGCAGAACTTGTGGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: ISTYNVSCLPDK*WRNGSAELVGG Trigger: CCCTCCCACAAGTTCTGCACTACCATTCCTCCAGCACTTGTCTGGCAGGCAGGACACATTGTAGGTGGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCTGCCAGACAAGTGCTGGAGGAATGGTAGTGCAGAACTTGTGGGAGGGACCATTATTGTATCCTCTTaGTCAAGTTTGGCTGTCACC | + |
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Preference number: 3 (lower is better) Translates to: CLPDKCWRNGSAELVGGTIIVSS*SSLAVT Trigger: GGTGACAGCCAAACTTGACAAAGAGGATACAATAAT...GGTCCCTCCCACAAGTTCTGCACTACCATTCCTCCAGCACTTGTCTGGCAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR CCA 72 bp | CAGACAAGTGCTGGAGGAATGGTAGTGCAGAACTTGTaGGAGGGACCAACCAATGACTGGTTAAACTTGAAG | + |
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Preference number: 3 (lower is better) Translates to: QTSAGGMVVQNL*EGPTNDWLNLK Trigger: CTTCAAGTTTAACCAGTCATTGGTTGGTCCCTCCCACAAGTTCTGCACTACCATTCCTCCAGCACTTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR TCA 72 bp | AATGGTAGTGCAGAACTTGTGGGAGGGACCAACCAATaGCTGGTTAAACTTGAAGCTCAGTTCACAAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: NGSAELVGGTNQ*LVKLEAQFTRG Trigger: TCCCCTTGTGAACTGAGCTTCAAGTTTAACCAGTCATTGGTTGGTCCCTCCCACAAGTTCTGCACTACCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR CCA 72 bp | GTTATAGGAGTCAGAGATGGAGGAGCTCAGAGAACATaGGCCATCCTATCAACTAAGCAAAGCTCTCATAGG | + |
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Preference number: 3 (lower is better) Translates to: VIGVRDGGAQRT*AILSTKQSSHR Trigger: CCTATGAGAGCTTTGCTTAGTTGATAGGATGGCCCATGTTCTCTGAGCTCCTCCATCTCTGACTCCTATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR CCA 72 bp | TTGAGATATTTGTGGATTGGTGAGAAGCTGGTGCACTaGAAACTTTCAGGAATCTATGAGGATGACCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: LRYLWIGEKLVH*KLSGIYEDDPR Trigger: CCTTGGGTCATCCTCATAGATTCCTGAAAGTTTCCAGTGCACCAGCTTCTCACCAATCCACAAATATCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR GCA 72 bp | GTAGTCTTGTCCAGCTTAATATGGGGGCTTTTGCCTTaGATTATTGTATCCTCTTTGTCAAGTTTGGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: VVLSSLIWGLLP*IIVSSLSSLAV Trigger: GACAGCCAAACTTGACAAAGAGGATACAATAATGCAAGGCAAAAGCCCCCATATTAAGCTGGACAAGACTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR TCA 72 bp | CAACCCAGGCTGATACTAGGACAGAGATTAGCTCTCTaGAAATTGAAAGTTGGACCACATTACCAAACAAAC | + |
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Preference number: 3 (lower is better) Translates to: QPRLILGQRLAL*KLKVGPHYQTN Trigger: GTTTGTTTGGTAATGTGGTCCAACTTTCAATTTTCAGAGAGCTAATCTCTGTCCTAGTATCAGCCTGGGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR GCA 72 bp | ACTAAGCAAAGCTCTCATAGGATTACAAGAATGAAATaGCAGGAGGAGTTTGGACTACATGAGTCTGCATCA | + |
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Preference number: 3 (lower is better) Translates to: TKQSSHRITRMK*QEEFGLHESAS Trigger: TGATGCAGACTCATGTAGTCCAAACTCCTCCTGGCATTTCATTCTTGTAATCCTATGAGAGCTTTGCTTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR CCA 72 bp | AGTGCCTTGTCCAGTCATCATCAGAAAGGATTTATCTaGCAGTATATTAAAGTGGTTTCAGGGATACACAGC | + |
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Preference number: 3 (lower is better) Translates to: SALSSHHQKGFI*QYIKVVSGIHS Trigger: GCTGTGTATCCCTGAAACCACTTTAATATACTGCCAGATAAATCCTTTCTGATGATGACTGGACAAGGCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR-3UTR CAA 90 bp | GTCTCCTACATTTTAGTCTCTTTAGTGCAAAAAGTTACTCTACAGTCTTCAGAAAATGCCAGGAGGAGTTaGGACTACATGAGTCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: VSYILVSLVQKVTLQSSENARRS*DYMSLH Trigger: ATGCAGACTCATGTAGTCCAAACTCCTCCTGGCATT...TTCTGAAGACTGTAGAGTAACTTTTTGCACTAAAGAGACTAAAATGTAGGAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR TCA 72 bp | TATCAACTAAGCAAAGCTCTCATAGGATTACAAGAATaGAATGCCAGGAGGAGTTTGGACTACATGAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: YQLSKALIGLQE*NARRSLDYMSL Trigger: CAGACTCATGTAGTCCAAACTCCTCCTGGCATTTCATTCTTGTAATCCTATGAGAGCTTTGCTTAGTTGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| CDS-3UTR CCA 90 bp | GTGTCCTGCCTGCCAGACAAGTGCTGGAGGAATGGTAGTGCAGAACTTGTGGGAACCCGGCATAGGAGATaGATGGGTCCTGGCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: VSCLPDKCWRNGSAELVGTRHRR*MGPGSE Trigger: TTCAGAGCCAGGACCCATCCATCTCCTATGCCGGGT...TCCCACAAGTTCTGCACTACCATTCCTCCAGCACTTGTCTGGCAGGCAGGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| CDS-3UTR CCA 90 bp | GTACCCTCCACTGCCCAAATAACCAGGAACCAGGGACCAGCTCAGACTCCTAGGGGCATAGGAGATGGATaGGTCCTGGCTCTGAATGTT | + |
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Preference number: 4 (lower is better) Translates to: VPSTAQITRNQGPAQTPRGIGDG*VLALNV Trigger: AACATTCAGAGCCAGGACCCATCCATCTCCTATGCC...CCTAGGAGTCTGAGCTGGTCCCTGGTTCCTGGTTATTTGGGCAGTGGAGGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR CAA 72 bp | TGCCAGACAAGTGCTGGAGGAATGGTAGTGCAGAACTaGTGGGAGGGACCAACCAATGACTGGTTAAACTTG | + |
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Preference number: 4 (lower is better) Translates to: CQTSAGGMVVQN*WEGPTNDWLNL Trigger: CAAGTTTAACCAGTCATTGGTTGGTCCCTCCCACAAGTTCTGCACTACCATTCCTCCAGCACTTGTCTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| CDS-3UTR TCA 90 bp | TTTAGAGATCTCTATCATATCCCTCCCCTCAAAGAAAAGAGAATGCCACAGAAAGCAGGCCCAGGAGGATaGACTGAGGGATGGCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: FRDLYHIPPLKEKRMPQKAGPGG*TEGWQS Trigger: AGACTGCCATCCCTCAGTTCATCCTCCTGGGCCTGC...TTTCTGTGGCATTCTCTTTTCTTTGAGGGGAGGGATATGATAGAGATCTCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| CDS-3UTR TCA 90 bp | CATAGAAAGATCAGGTTAGCAAGGGATGGGAGTCTCCTACATTTTAGTCTCTTTCAGAGCAGGCCAACTTaGGCAGGGCAGATATGTCAC | + |
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Preference number: 4 (lower is better) Translates to: HRKIRLARDGSLLHFSLFQSRPT*AGQICH Trigger: GTGACATATCTGCCCTGCTCAAGTTGGCCTGCTCTG...AAAGAGACTAAAATGTAGGAGACTCCCATCCCTTGCTAACCTGATCTTTCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR CAA 72 bp | AACTTGTGGGAGGGACCAACCAATGACTGGTTAAACTaGAAGCTCAGTTCACAAGGGGAACTATGTACCCTC | + |
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Preference number: 4 (lower is better) Translates to: NLWEGPTNDWLN*KLSSQGELCTL Trigger: GAGGGTACATAGTTCCCCTTGTGAACTGAGCTTCAAGTTTAACCAGTCATTGGTTGGTCCCTCCCACAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| CDS-3UTR TCA 90 bp | TTTAGAGATCTCTATCATATCCCTCCCCTCAAAGAAAAGAGAATGCCACAGAAACATAGGAAACAACAATaGGTAAGAATGGCACCACAG | + |
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Preference number: 4 (lower is better) Translates to: FRDLYHIPPLKEKRMPQKHRKQQ*VRMAPQ Trigger: CTGTGGTGCCATTCTTACTCATTGTTGTTTCCTATG...TTTCTGTGGCATTCTCTTTTCTTTGAGGGGAGGGATATGATAGAGATCTCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTAATTTAGAGATCTCTATCATATCCCTCCCCTCAAAGAAATCTTACATAGGACTCTaGTCAGGGCCTCTTTTATAT | + |
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Preference number: 4 (lower is better) Translates to: CVCVCNLEISIISLPSKKSYIGL*SGPLLY Trigger: ATATAAAAGAGGCCCTGATCAGAGTCCTATGTAAGA...TTTCTTTGAGGGGAGGGATATGATAGAGATCTCTAAATTACACACACACACACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| 3UTR CAA 72 bp | ATATGGGGGCTTTTGCCTTGCATTATTGTATCCTCTTaGTCAAGTTTGGCTGTCACCTCTAGAAGAATTTTT | + |
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Preference number: 4 (lower is better) Translates to: IWGLLPCIIVSS*SSLAVTSRRIF Trigger: AAAAATTCTTCTAGAGGTGACAGCCAAACTTGACAAAGAGGATACAATAATGCAAGGCAAAAGCCCCCATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| CDS-3UTR CAA 90 bp | TGCCTGCCAGACAAGTGCTGGAGGAATGGTAGTGCAGAACTTGTGGGAGGGACCCAGGGCATAGAACATTaGCTGCTGCTCTGGGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: CLPDKCWRNGSAELVGGTQGIEH*LLLWED Trigger: ATCCTCCCAGAGCAGCAGCAAATGTTCTATGCCCTG...GGTCCCTCCCACAAGTTCTGCACTACCATTCCTCCAGCACTTGTCTGGCAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| CDS-3UTR CAA 90 bp | GTGTCCTGCCTGCCAGACAAGTGCTGGAGGAATGGTAGTGCAGAACTTGTGGGACATGAAAAAGTACATTaGTGTCAGGCACCCGGCATA | + |
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Preference number: 5 (lower is better) Translates to: VSCLPDKCWRNGSAELVGHEKVH*CQAPGI Trigger: TATGCCGGGTGCCTGACACAAATGTACTTTTTCATG...TCCCACAAGTTCTGCACTACCATTCCTCCAGCACTTGTCTGGCAGGCAGGACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| CDS-3UTR CAA 90 bp | CATAGAAAGATCAGGTTAGCAAGGGATGGGAGTCTCCTACATTTTAGTCTCTTTCACAGAATGACAATCTaGCCAAGAGTAGGGTGTGTA | + |
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Preference number: 5 (lower is better) Translates to: HRKIRLARDGSLLHFSLFHRMTI*PRVGCV Trigger: TACACACCCTACTCTTGGCAAGATTGTCATTCTGTG...AAAGAGACTAAAATGTAGGAGACTCCCATCCCTTGCTAACCTGATCTTTCTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| CDS-3UTR CAA 90 bp | GTCTCCTACATTTTAGTCTCTTTAGTGCAAAAAGTTACTCTACAGTCTTCAGAACAGGTGGAAAAGACCTaGGCTATGCCCTGTTTAGTT | + |
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Preference number: 5 (lower is better) Translates to: VSYILVSLVQKVTLQSSEQVEKT*AMPCLV Trigger: AACTAAACAGGGCATAGCCAAGGTCTTTTCCACCTG...TTCTGAAGACTGTAGAGTAACTTTTTGCACTAAAGAGACTAAAATGTAGGAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214228.2 |
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| CDS TCA 72 bp | GAATGGAGCAGACAATTTGTACATAGGAAACAACAATaGGTAAGAATGGCACCACAGTATCAAGTGTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: EWSRQFVHRKQQ*VRMAPQYQVFP Trigger: TGGGAACACTTGATACTGTGGTGCCATTCTTACTCATTGTTGTTTCCTATGTACAAATTGTCTGCTCCATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072993.2 ENSMUST00000214228.2 |
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