Pregenerated sensors for OLFR380 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072709Ensembl transcript IDs: ENSMUST00000121209.3, ENSMUST00000127789.3
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCCCAGCAGAAACACACATTTAAGGCAGAGGATGGCATCATTGGATCTCCAAGGACTCCCTTTTGCAGATaGGAATATTATGTAGTATGT | + |
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Preference number: 2 (lower is better) Translates to: AQQKHTFKAEDGIIGSPRTPFCR*EYYVVC Trigger: ACATACTACATAATATTCCCATCTGCAAAAGGGAGT...CCTTGGAGATCCAATGATGCCATCCTCTGCCTTAAATGTGTGTTTCTGCTGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCTTCGAACTCAGAGATCTGCCTaGCTCTGCCTTCCAAGTGCTGGGATTAAAGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: CRPGWLRTQRSA*LCLPSAGIKGV Trigger: CACACCTTTAATCCCAGCACTTGGAAGGCAGAGGCAGGCAGATCTCTGAGTTCGAAGCCAGCCTGGTCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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| 3UTR-3UTR CAA 90 bp | GCCCAGCAGAAACACACATTTAAGGCAGAGGATGGCATCATTGGATCTCCAAGGAGTATGTTCTTGTATTaGGGTTCCCTAGGAAGGATA | + |
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Preference number: 3 (lower is better) Translates to: AQQKHTFKAEDGIIGSPRSMFLY*GSLGRI Trigger: TATCCTTCCTAGGGAACCCAAATACAAGAACATACT...CCTTGGAGATCCAATGATGCCATCCTCTGCCTTAAATGTGTGTTTCTGCTGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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| 3UTR-3UTR CAA 90 bp | GTGTGTGCCACTATGCCCAGCAGAAACACACATTTAAGGCAGAGGATGGCATCATTATGTAGTATGTTCTaGTATTTGGGTTCCCTAGGA | + |
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Preference number: 3 (lower is better) Translates to: VCATMPSRNTHLRQRMASLCSMF*YLGSLG Trigger: TCCTAGGGAACCCAAATACAAGAACATACTACATAA...TGATGCCATCCTCTGCCTTAAATGTGTGTTTCTGCTGGGCATAGTGGCACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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| 3UTR-3UTR CAA 90 bp | GCCCAGCAGAAACACACATTTAAGGCAGAGGATGGCATCATTGGATCTCCAAGGTTATGTAGTATGTTCTaGTATTTGGGTTCCCTAGGA | + |
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Preference number: 3 (lower is better) Translates to: AQQKHTFKAEDGIIGSPRLCSMF*YLGSLG Trigger: TCCTAGGGAACCCAAATACAAGAACATACTACATAA...CCTTGGAGATCCAATGATGCCATCCTCTGCCTTAAATGTGTGTTTCTGCTGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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| CDS-3UTR TCA 90 bp | GTGTGTGCCACTATGCCCAGCAGAAACACACATTTAAGGCAGAGGATGGCATCAGGCAGCCTGCATAGGTaGTGGATGTGTCCTGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VCATMPSRNTHLRQRMASGSLHR*WMCPGS Trigger: AGAGCCAGGACACATCCATCACCTATGCAGGCTGCC...TGATGCCATCCTCTGCCTTAAATGTGTGTTTCTGCTGGGCATAGTGGCACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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| CDS-3UTR TCA 90 bp | GCCCAGCAGAAACACACATTTAAGGCAGAGGATGGCATCATTGGATCTCCAAGGGGCAGCCTGCATAGGTaGTGGATGTGTCCTGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: AQQKHTFKAEDGIIGSPRGSLHR*WMCPGS Trigger: AGAGCCAGGACACATCCATCACCTATGCAGGCTGCC...CCTTGGAGATCCAATGATGCCATCCTCTGCCTTAAATGTGTGTTTCTGCTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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| CDS-3UTR TCA 90 bp | GTGTGTGCCACTATGCCCAGCAGAAACACACATTTAAGGCAGAGGATGGCATCACAGAGCAGGCCAACTTaGGCAGGGCAGACATGTCAC | + |
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Preference number: 4 (lower is better) Translates to: VCATMPSRNTHLRQRMASQSRPT*AGQTCH Trigger: GTGACATGTCTGCCCTGCTCAAGTTGGCCTGCTCTG...TGATGCCATCCTCTGCCTTAAATGTGTGTTTCTGCTGGGCATAGTGGCACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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| CDS-3UTR CCA 90 bp | GTGTGTGCCACTATGCCCAGCAGAAACACACATTTAAGGCAGAGGATGGCATCAGCAAAGAACAGTTGCTaGTGCTCTGCAGGGATCGGC | + |
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Preference number: 4 (lower is better) Translates to: VCATMPSRNTHLRQRMASAKNSC*CSAGIG Trigger: GCCGATCCCTGCAGAGCACCAGCAACTGTTCTTTGC...TGATGCCATCCTCTGCCTTAAATGTGTGTTTCTGCTGGGCATAGTGGCACACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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| CDS-3UTR GCA 90 bp | GTGTGTGCCACTATGCCCAGCAGAAACACACATTTAAGGCAGAGGATGGCATCAAGGGCAAAGAACAGTTaGTGGTGCTCTGCAGGGATC | + |
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Preference number: 4 (lower is better) Translates to: VCATMPSRNTHLRQRMASRAKNS*WCSAGI Trigger: GATCCCTGCAGAGCACCAGCAACTGTTCTTTGCCCT...TGATGCCATCCTCTGCCTTAAATGTGTGTTTCTGCTGGGCATAGTGGCACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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| CDS-3UTR CCA 90 bp | GCCCAGCAGAAACACACATTTAAGGCAGAGGATGGCATCATTGGATCTCCAAGGCCCAGGAGGAGGAACTaGTTGAAGAGAGTTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AQQKHTFKAEDGIIGSPRPRRRN*LKRVWL Trigger: CAACCAAACTCTCTTCAACCAGTTCCTCCTCCTGGG...CCTTGGAGATCCAATGATGCCATCCTCTGCCTTAAATGTGTGTTTCTGCTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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| CDS-3UTR TCA 90 bp | GCCCAGCAGAAACACACATTTAAGGCAGAGGATGGCATCATTGGATCTCCAAGGGGAGGAGGAACTGGTTaGAGAGAGTTTGGTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: AQQKHTFKAEDGIIGSPRGGGTG*REFGCS Trigger: AGAACAACCAAACTCTCTTCAACCAGTTCCTCCTCC...CCTTGGAGATCCAATGATGCCATCCTCTGCCTTAAATGTGTGTTTCTGCTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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| CDS-3UTR CCA 90 bp | CTTTTGCAGATGGGAATATTATGTAGTATGTTCTTGTATTTGGGTTCCCTAGGAGCAAAGAACAGTTGCTaGTGCTCTGCAGGGATCGGC | + |
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Preference number: 4 (lower is better) Translates to: LLQMGILCSMFLYLGSLGAKNSC*CSAGIG Trigger: GCCGATCCCTGCAGAGCACCAGCAACTGTTCTTTGC...TCCTAGGGAACCCAAATACAAGAACATACTACATAATATTCCCATCTGCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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| CDS-3UTR GCA 90 bp | CTTTTGCAGATGGGAATATTATGTAGTATGTTCTTGTATTTGGGTTCCCTAGGAAGGGCAAAGAACAGTTaGTGGTGCTCTGCAGGGATC | + |
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Preference number: 4 (lower is better) Translates to: LLQMGILCSMFLYLGSLGRAKNS*WCSAGI Trigger: GATCCCTGCAGAGCACCAGCAACTGTTCTTTGCCCT...TCCTAGGGAACCCAAATACAAGAACATACTACATAATATTCCCATCTGCAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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| CDS-3UTR CCA 90 bp | CTTTTGCAGATGGGAATATTATGTAGTATGTTCTTGTATTTGGGTTCCCTAGGACCCAGGAGGAGGAACTaGTTGAAGAGAGTTTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: LLQMGILCSMFLYLGSLGPRRRN*LKRVWL Trigger: CAACCAAACTCTCTTCAACCAGTTCCTCCTCCTGGG...TCCTAGGGAACCCAAATACAAGAACATACTACATAATATTCCCATCTGCAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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| CDS-3UTR TCA 90 bp | CTTTTGCAGATGGGAATATTATGTAGTATGTTCTTGTATTTGGGTTCCCTAGGAGGAGGAGGAACTGGTTaGAGAGAGTTTGGTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LLQMGILCSMFLYLGSLGGGGTG*REFGCS Trigger: AGAACAACCAAACTCTCTTCAACCAGTTCCTCCTCC...TCCTAGGGAACCCAAATACAAGAACATACTACATAATATTCCCATCTGCAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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| CDS-3UTR CAA 90 bp | GCCCAGCAGAAACACACATTTAAGGCAGAGGATGGCATCATTGGATCTCCAAGGTCAGAGCAGGCCAACTaGAGCAGGGCAGACATGTCA | + |
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Preference number: 5 (lower is better) Translates to: AQQKHTFKAEDGIIGSPRSEQAN*SRADMS Trigger: TGACATGTCTGCCCTGCTCAAGTTGGCCTGCTCTGA...CCTTGGAGATCCAATGATGCCATCCTCTGCCTTAAATGTGTGTTTCTGCTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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| CDS-3UTR CAA 90 bp | GTGTGTGCCACTATGCCCAGCAGAAACACACATTTAAGGCAGAGGATGGCATCAAGACACACACAGAGCTaGAGACTCATGATGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: VCATMPSRNTHLRQRMASRHTQS*RLMMLV Trigger: CACCAGCATCATGAGTCTCAAGCTCTGTGTGTGTCT...TGATGCCATCCTCTGCCTTAAATGTGTGTTTCTGCTGGGCATAGTGGCACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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| CDS-3UTR CAA 90 bp | GTGTGTGCCACTATGCCCAGCAGAAACACACATTTAAGGCAGAGGATGGCATCAAGGAGGAGGAACTGGTaGAAGAGAGTTTGGTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: VCATMPSRNTHLRQRMASRRRNW*KRVWLF Trigger: GAACAACCAAACTCTCTTCAACCAGTTCCTCCTCCT...TGATGCCATCCTCTGCCTTAAATGTGTGTTTCTGCTGGGCATAGTGGCACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121209.3 ENSMUST00000127789.3 |
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