Pregenerated sensors for OLFR378 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055971Ensembl transcript IDs: ENSMUST00000069790.5
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGAGTAAATTAAGATATAGAACCATGGTGATTAGAGATATGACTTaGATTCTACACTACTGTTTCCAGGATCACCTGGACAAGACAAAG | + |
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Preference number: 1 (lower is better) Translates to: WSKLRYRTMVIRDMT*ILHYCFQDHLDKTK Trigger: CTTTGTCTTGTCCAGGTGATCCTGGAAACAGTAGTGTAGAATTCAAGTCATATCTCTAATCACCATGGTTCTATATCTTAATTTACTCCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| 3UTR GCA 72 bp | CACTACTGTTTCCAGGATCACCTGGACAAGACAAAGTaGACATATTCAGGTCCCCCAAATTCAGGTCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: HYCFQDHLDKTK*TYSGPPNSGPS Trigger: GGAAGGACCTGAATTTGGGGGACCTGAATATGTGCACTTTGTCTTGTCCAGGTGATCCTGGAAACAGTAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| 3UTR TCA 72 bp | TTAAGATATAGAACCATGGTGATTAGAGATATGACTTaGATTCTACACTACTGTTTCCAGGATCACCTGGAC | + |
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Preference number: 3 (lower is better) Translates to: LRYRTMVIRDMT*ILHYCFQDHLD Trigger: GTCCAGGTGATCCTGGAAACAGTAGTGTAGAATTCAAGTCATATCTCTAATCACCATGGTTCTATATCTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS-3UTR TCA 90 bp | CTGGACAAGACAAAGTGCACATATTCAGGTCCCCCAAATTCAGGTCCTTCCAAATCCCCAGGACAGTGGTaGGATACATGGACAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LDKTKCTYSGPPNSGPSKSPGQW*DTWTGA Trigger: TGCTCCTGTCCATGTATCTCACCACTGTCCTGGGGA...TTTGGAAGGACCTGAATTTGGGGGACCTGAATATGTGCACTTTGTCTTGTCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS-3UTR TCA 90 bp | GGACAAGACAAAGTGCACATATTCAGGTCCCCCAAATTCAGGTCCTTCCAAAATATGACAATCTGGCCATaGGCAAGGTGTGCAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: GQDKVHIFRSPKFRSFQNMTIWP*ARCAAW Trigger: CCATGCTGCACACCTTGCTCATGGCCAGATTGTCAT...ATTTTGGAAGGACCTGAATTTGGGGGACCTGAATATGTGCACTTTGTCTTGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS-3UTR CCA 90 bp | CAGGATCACCTGGACAAGACAAAGTGCACATATTCAGGTCCCCCAAATTCAGGTCCCAGGAGAAGGAACTaGGAGATGACAGTTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: QDHLDKTKCTYSGPPNSGPRRRN*EMTVWF Trigger: AAACCAAACTGTCATCTCCCAGTTCCTTCTCCTGGG...ACCTGAATTTGGGGGACCTGAATATGTGCACTTTGTCTTGTCCAGGTGATCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS-3UTR CCA 90 bp | AGATATGACTTGAATTCTACACTACTGTTTCCAGGATCACCTGGACAAGACAAACAGTTGCTGGTGCTCTaGGGGAATAGGCAGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: RYDLNSTLLFPGSPGQDKQLLVL*GNRQTQ Trigger: CTGGGTCTGCCTATTCCCCCAGAGCACCAGCAACTG...TTTGTCTTGTCCAGGTGATCCTGGAAACAGTAGTGTAGAATTCAAGTCATATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS-3UTR GCA 90 bp | CTGGACAAGACAAAGTGCACATATTCAGGTCCCCCAAATTCAGGTCCTTCCAAATTGTGCCAGGCAACCTaGATAAGGAATAGATGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LDKTKCTYSGPPNSGPSKLCQAT*IRNRWN Trigger: GTTCCATCTATTCCTTATGCAGGTTGCCTGGCACAA...TTTGGAAGGACCTGAATTTGGGGGACCTGAATATGTGCACTTTGTCTTGTCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS-3UTR TCA 90 bp | CCAGGATCACCTGGACAAGACAAAGTGCACATATTCAGGTCCCCCAAATTCAGGTGTACATTAAAGACATaGTGGTCTCCTTCACATAAG | + |
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Preference number: 4 (lower is better) Translates to: PGSPGQDKVHIFRSPKFRCTLKT*WSPSHK Trigger: CTTATGTGAAGGAGACCATCATGTCTTTAATGTACA...CCTGAATTTGGGGGACCTGAATATGTGCACTTTGTCTTGTCCAGGTGATCCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS-3UTR GCA 90 bp | CAGGATCACCTGGACAAGACAAAGTGCACATATTCAGGTCCCCCAAATTCAGGTAAAAGGCTTTACGGATaGCTTGAAAAGAAGGGAACT | + |
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Preference number: 4 (lower is better) Translates to: QDHLDKTKCTYSGPPNSGKRLYG*LEKKGT Trigger: AGTTCCCTTCTTTTCAAGGCATCCGTAAAGCCTTTT...ACCTGAATTTGGGGGACCTGAATATGTGCACTTTGTCTTGTCCAGGTGATCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS-3UTR CCA 90 bp | CAGGATCACCTGGACAAGACAAAGTGCACATATTCAGGTCCCCCAAATTCAGGTGCTAATTCATTATCATaGGTGTCAGAACAAGCCACT | + |
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Preference number: 4 (lower is better) Translates to: QDHLDKTKCTYSGPPNSGANSLS*VSEQAT Trigger: AGTGGCTTGTTCTGACACCCATGATAATGAATTAGC...ACCTGAATTTGGGGGACCTGAATATGTGCACTTTGTCTTGTCCAGGTGATCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS-3UTR GCA 90 bp | GGACAAGACAAAGTGCACATATTCAGGTCCCCCAAATTCAGGTCCTTCCAAAATAAAGAAGTATATTTGTaGCAGGCAACCTGCATAAGG | + |
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Preference number: 4 (lower is better) Translates to: GQDKVHIFRSPKFRSFQNKEVYL*QATCIR Trigger: CCTTATGCAGGTTGCCTGGCACAAATATACTTCTTT...ATTTTGGAAGGACCTGAATTTGGGGGACCTGAATATGTGCACTTTGTCTTGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS-3UTR TCA 90 bp | AGATATGACTTGAATTCTACACTACTGTTTCCAGGATCACCTGGACAAGACAAAATTGTCTTCACAGAATaGCAATCTGGCCATGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: RYDLNSTLLFPGSPGQDKIVFTE*QSGHEQ Trigger: TTGCTCATGGCCAGATTGTCATTCTGTGAAGACAAT...TTTGTCTTGTCCAGGTGATCCTGGAAACAGTAGTGTAGAATTCAAGTCATATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS-3UTR GCA 90 bp | TATGACTTGAATTCTACACTACTGTTTCCAGGATCACCTGGACAAGACAAAGTGGGAGGAAACAATTCTTaGATAAGATACAATGATGAG | + |
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Preference number: 4 (lower is better) Translates to: YDLNSTLLFPGSPGQDKVGGNNS*IRYNDE Trigger: CTCATCATTGTATCTTATGCAAGAATTGTTTCCTCC...CACTTTGTCTTGTCCAGGTGATCCTGGAAACAGTAGTGTAGAATTCAAGTCATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS-3UTR CCA 90 bp | CACATATTCAGGTCCCCCAAATTCAGGTCCTTCCAAAATTCAACTGATCATATATGCATAAGGAATAGATaGAACTTTGCTTTGCATGTT | + |
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Preference number: 4 (lower is better) Translates to: HIFRSPKFRSFQNSTDHICIRNR*NFALHV Trigger: AACATGCAAAGCAAAGTTCCATCTATTCCTTATGCA...TATATGATCAGTTGAATTTTGGAAGGACCTGAATTTGGGGGACCTGAATATGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS CCA 90 bp | GAGATACATGGACAGGAGCAGGGCATAGTACAGTTGCTGGTGCTCTaGGGGAATAGGCAGACCCAGGAGAAGGAACTGGGAGATGACAGT | + |
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Preference number: 5 (lower is better) Translates to: EIHGQEQGIVQLLVL*GNRQTQEKELGDDS Trigger: ACTGTCATCTCCCAGTTCCTTCTCCTGGGTCTGCCTATTCCCCCAGAGCACCAGCAACTGTACTATGCCCTGCTCCTGTCCATGTATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS GCA 90 bp | GAGGAAGTTTCCAAGGTCTCCAAAATACAGAAAGAAGTATATTTGTaGCAGGCAACCTGCATAAGGAATAGATGGAACTTTGCTTTGCAT | + |
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Preference number: 5 (lower is better) Translates to: EEVSKVSKIQKEVYL*QATCIRNRWNFALH Trigger: ATGCAAAGCAAAGTTCCATCTATTCCTTATGCAGGTTGCCTGGCACAAATATACTTCTTTCTGTATTTTGGAGACCTTGGAAACTTCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS-3UTR CAA 90 bp | CACATATTCAGGTCCCCCAAATTCAGGTCCTTCCAAAATTCAACTGATCATATAGGAATAGATGGAACTTaGCTTTGCATGTTCTGCAAC | + |
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Preference number: 5 (lower is better) Translates to: HIFRSPKFRSFQNSTDHIGIDGT*LCMFCN Trigger: GTTGCAGAACATGCAAAGCAAAGTTCCATCTATTCC...TATATGATCAGTTGAATTTTGGAAGGACCTGAATTTGGGGGACCTGAATATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS CCA 72 bp | GGACAGGAGCAGGGCATAGTACAGTTGCTGGTGCTCTaGGGGAATAGGCAGACCCAGGAGAAGGAACTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GQEQGIVQLLVL*GNRQTQEKELG Trigger: TCCCAGTTCCTTCTCCTGGGTCTGCCTATTCCCCCAGAGCACCAGCAACTGTACTATGCCCTGCTCCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS CAA 90 bp | CAGGACAGTGGTGAGATACATGGACAGGAGCAGGGCATAGTACAGTaGCTGGTGCTCTGGGGGAATAGGCAGACCCAGGAGAAGGAACTG | + |
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Preference number: 6 (lower is better) Translates to: QDSGEIHGQEQGIVQ*LVLWGNRQTQEKEL Trigger: CAGTTCCTTCTCCTGGGTCTGCCTATTCCCCCAGAGCACCAGCAACTGTACTATGCCCTGCTCCTGTCCATGTATCTCACCACTGTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS CAA 90 bp | AAGGAGGAAGTTTCCAAGGTCTCCAAAATACAGAAAGAAGTATATTaGTGCCAGGCAACCTGCATAAGGAATAGATGGAACTTTGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: KEEVSKVSKIQKEVY*CQATCIRNRWNFAL Trigger: CAAAGCAAAGTTCCATCTATTCCTTATGCAGGTTGCCTGGCACAAATATACTTCTTTCTGTATTTTGGAGACCTTGGAAACTTCCTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS CAA 72 bp | GTTTCCAAGGTCTCCAAAATACAGAAAGAAGTATATTaGTGCCAGGCAACCTGCATAAGGAATAGATGGAAC | + |
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Preference number: 6 (lower is better) Translates to: VSKVSKIQKEVY*CQATCIRNRWN Trigger: GTTCCATCTATTCCTTATGCAGGTTGCCTGGCACAAATATACTTCTTTCTGTATTTTGGAGACCTTGGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS GCA 72 bp | TCCAAGGTCTCCAAAATACAGAAAGAAGTATATTTGTaGCAGGCAACCTGCATAAGGAATAGATGGAACTTT | + |
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Preference number: 6 (lower is better) Translates to: SKVSKIQKEVYL*QATCIRNRWNF Trigger: AAAGTTCCATCTATTCCTTATGCAGGTTGCCTGGCACAAATATACTTCTTTCTGTATTTTGGAGACCTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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| CDS GCA 72 bp | AAAATACAGAAAGAAGTATATTTGTGCCAGGCAACCTaGATAAGGAATAGATGGAACTTTGCTTTGCATGTT | + |
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Preference number: 6 (lower is better) Translates to: KIQKEVYLCQAT*IRNRWNFALHV Trigger: AACATGCAAAGCAAAGTTCCATCTATTCCTTATGCAGGTTGCCTGGCACAAATATACTTCTTTCTGTATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069790.5 |
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