Pregenerated sensors for OLFR376 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063881Ensembl transcript IDs: ENSMUST00000078952.9, ENSMUST00000120401.9, ENSMUST00000170592.4
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCAATAGCTATACTCTAACCCTAATCAGAGATTCTTCTGAGCCCTaGAAACACTGTCCAGTTGGGAATTGGATGGCCAGATGTGCTGTA | + |
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Preference number: 1 (lower is better) Translates to: INSYTLTLIRDSSEP*KHCPVGNWMARCAV Trigger: TACAGCACATCTGGCCATCCAATTCCCAACTGGACAGTGTTTGCAGGGCTCAGAAGAATCTCTGATTAGGGTTAGAGTATAGCTATTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR CCA 90 bp | TATGCCTGTACATATGAATCAGTGCATTGCAGATATGAGCTCTTGTaGGCTGCTTCTCAGAATCATTGGTTCAAGTATTATTTATGCTAC | + |
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Preference number: 1 (lower is better) Translates to: YACTYESVHCRYELL*AASQNHWFKYYLCY Trigger: GTAGCATAAATAATACTTGAACCAATGATTCTGAGAAGCAGCCCACAAGAGCTCATATCTGCAATGCACTGATTCATATGTACAGGCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGCAAAGATTCCCTTTCCTCCACATAATCAACATCAGACAAGGCATGTCTAGTGCATTGCAGATATaGGCTCTTGTGGGCTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LLQRFPFLHIINIRQGMSSALQI*ALVGCF Trigger: GAAGCAGCCCACAAGAGCTCATATCTGCAATGCACT...AGACATGCCTTGTCTGATGTTGATTATGTGGAGGAAAGGGAATCTTTGCAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR-3UTR GCA 90 bp | CTTCTGCAAAGATTCCCTTTCCTCCACATAATCAACATCAGACAAGGCATGTCTCAGGGTCTGGAAAACTaGCCCAGAATGTTATTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LLQRFPFLHIINIRQGMSQGLEN*PRMLLG Trigger: TCCCAATAACATTCTGGGGCAGTTTTCCAGACCCTG...AGACATGCCTTGTCTGATGTTGATTATGTGGAGGAAAGGGAATCTTTGCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTTTCCATGATCCTACTATATTAGACAGTAAGTTTGACACAGACTTGACGCAAACACTGTCCAGTTaGGAATTGGATGGCCAGATG | + |
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Preference number: 2 (lower is better) Translates to: LAFHDPTILDSKFDTDLTQTLSS*ELDGQM Trigger: CATCTGGCCATCCAATTCCCAACTGGACAGTGTTTG...CGTCAAGTCTGTGTCAAACTTACTGTCTAATATAGTAGGATCATGGAAAGCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR-3UTR CCA 90 bp | CTTGTGGGCTGCTTCTCAGAATCATTGGTTCAAGTATTATTTATGCTACTTCATCAAACACTGTCCAGTTaGGAATTGGATGGCCAGATG | + |
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Preference number: 2 (lower is better) Translates to: LVGCFSESLVQVLFMLLHQTLSS*ELDGQM Trigger: CATCTGGCCATCCAATTCCCAACTGGACAGTGTTTG...ATGAAGTAGCATAAATAATACTTGAACCAATGATTCTGAGAAGCAGCCCACAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR-3UTR CCA 90 bp | CTTGTGGGCTGCTTCTCAGAATCATTGGTTCAAGTATTATTTATGCTACTTCATATGATGACCAGGGTCTaGAAAACTGCCCCAGAATGT | + |
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Preference number: 2 (lower is better) Translates to: LVGCFSESLVQVLFMLLHMMTRV*KTAPEC Trigger: ACATTCTGGGGCAGTTTTCCAGACCCTGGTCATCAT...ATGAAGTAGCATAAATAATACTTGAACCAATGATTCTGAGAAGCAGCCCACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR CAA 90 bp | GTATATGCCTGTACATATGAATCAGTGCATTGCAGATATGAGCTCTaGTGGGCTGCTTCTCAGAATCATTGGTTCAAGTATTATTTATGC | + |
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Preference number: 2 (lower is better) Translates to: VYACTYESVHCRYEL*WAASQNHWFKYYLC Trigger: GCATAAATAATACTTGAACCAATGATTCTGAGAAGCAGCCCACAAGAGCTCATATCTGCAATGCACTGATTCATATGTACAGGCATATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR-3UTR TCA 90 bp | CATAAATGGTTGTATATGCCTGTACATATGAATCAGTGCATTGCAGATATGAGCGAATCTGGCTTTCCATaGTCCTACTATATTAGACAG | + |
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Preference number: 2 (lower is better) Translates to: HKWLYMPVHMNQCIADMSESGFP*SYYIRQ Trigger: CTGTCTAATATAGTAGGATCATGGAAAGCCAGATTC...GCTCATATCTGCAATGCACTGATTCATATGTACAGGCATATACAACCATTTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR-3UTR TCA 90 bp | CTTGTGGGCTGCTTCTCAGAATCATTGGTTCAAGTATTATTTATGCTACTTCATGAATCTGGCTTTCCATaGTCCTACTATATTAGACAG | + |
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Preference number: 2 (lower is better) Translates to: LVGCFSESLVQVLFMLLHESGFP*SYYIRQ Trigger: CTGTCTAATATAGTAGGATCATGGAAAGCCAGATTC...ATGAAGTAGCATAAATAATACTTGAACCAATGATTCTGAGAAGCAGCCCACAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR-3UTR GCA 90 bp | CATAAATGGTTGTATATGCCTGTACATATGAATCAGTGCATTGCAGATATGAGCACCCTACCTGGAATTTaGACTAGCCATCAAAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: HKWLYMPVHMNQCIADMSTLPGI*TSHQKN Trigger: ATTCTTTTGATGGCTAGTGCAAATTCCAGGTAGGGT...GCTCATATCTGCAATGCACTGATTCATATGTACAGGCATATACAACCATTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR-3UTR GCA 90 bp | CTTGTGGGCTGCTTCTCAGAATCATTGGTTCAAGTATTATTTATGCTACTTCATACCCTACCTGGAATTTaGACTAGCCATCAAAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: LVGCFSESLVQVLFMLLHTLPGI*TSHQKN Trigger: ATTCTTTTGATGGCTAGTGCAAATTCCAGGTAGGGT...ATGAAGTAGCATAAATAATACTTGAACCAATGATTCTGAGAAGCAGCCCACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR-3UTR CCA 90 bp | CTTGTGGGCTGCTTCTCAGAATCATTGGTTCAAGTATTATTTATGCTACTTCATAAAGTCGTCAGAATCTaGCTTTCCATGATCCTACTA | + |
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Preference number: 2 (lower is better) Translates to: LVGCFSESLVQVLFMLLHKVVRI*LSMILL Trigger: TAGTAGGATCATGGAAAGCCAGATTCTGACGACTTT...ATGAAGTAGCATAAATAATACTTGAACCAATGATTCTGAGAAGCAGCCCACAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR-3UTR CCA 90 bp | CATAAATGGTTGTATATGCCTGTACATATGAATCAGTGCATTGCAGATATGAGCAAAGTCGTCAGAATCTaGCTTTCCATGATCCTACTA | + |
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Preference number: 2 (lower is better) Translates to: HKWLYMPVHMNQCIADMSKVVRI*LSMILL Trigger: TAGTAGGATCATGGAAAGCCAGATTCTGACGACTTT...GCTCATATCTGCAATGCACTGATTCATATGTACAGGCATATACAACCATTTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR-3UTR TCA 90 bp | CTTGTGGGCTGCTTCTCAGAATCATTGGTTCAAGTATTATTTATGCTACTTCATTGTCACGTATTGAGTTaGATTTTCCTAAAGTCGTCA | + |
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Preference number: 2 (lower is better) Translates to: LVGCFSESLVQVLFMLLHCHVLS*IFLKSS Trigger: TGACGACTTTAGGAAAATTCAACTCAATACGTGACA...ATGAAGTAGCATAAATAATACTTGAACCAATGATTCTGAGAAGCAGCCCACAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR GCA 72 bp | TATACTCTAACCCTAATCAGAGATTCTTCTGAGCCCTaGAAACACTGTCCAGTTGGGAATTGGATGGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: YTLTLIRDSSEP*KHCPVGNWMAR Trigger: TCTGGCCATCCAATTCCCAACTGGACAGTGTTTGCAGGGCTCAGAAGAATCTCTGATTAGGGTTAGAGTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR GCA 72 bp | CAAACACTGTCCAGTTGGGAATTGGATGGCCAGATGTaGTGTATCTATCACACCAAACATCTAACAACAACT | + |
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Preference number: 3 (lower is better) Translates to: QTLSSWELDGQM*CIYHTKHLTTT Trigger: AGTTGTTGTTAGATGTTTGGTGTGATAGATACAGCACATCTGGCCATCCAATTCCCAACTGGACAGTGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR-3UTR CAA 90 bp | CTTCTGCAAAGATTCCCTTTCCTCCACATAATCAACATCAGACAAGGCATGTCTTGCCCCAGAATGTTATaGGGAATCACTTTTCCATCA | + |
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Preference number: 3 (lower is better) Translates to: LLQRFPFLHIINIRQGMSCPRML*GITFPS Trigger: TGATGGAAAAGTGATTCCCAATAACATTCTGGGGCA...AGACATGCCTTGTCTGATGTTGATTATGTGGAGGAAAGGGAATCTTTGCAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR CCA 72 bp | ACAATGATGTTCATGCAGCTAAGACTAAATAATGAATaGCCATTCACCCTATTTCTCAGGCTGCAAGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: TMMFMQLRLNNE*PFTLFLRLQEV Trigger: AACTTCTTGCAGCCTGAGAAATAGGGTGAATGGCCATTCATTATTTAGTCTTAGCTGCATGAACATCATTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR-3UTR CAA 90 bp | CATAAATGGTTGTATATGCCTGTACATATGAATCAGTGCATTGCAGATATGAGCATGTCACGTATTGAGTaGAATTTTCCTAAAGTCGTC | + |
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Preference number: 3 (lower is better) Translates to: HKWLYMPVHMNQCIADMSMSRIE*NFPKVV Trigger: GACGACTTTAGGAAAATTCAACTCAATACGTGACAT...GCTCATATCTGCAATGCACTGATTCATATGTACAGGCATATACAACCATTTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR TCA 72 bp | ATCAAAAGAATAACTCTTTCATGTCACGTATTGAGTTaGATTTTCCTAAAGTCGTCAGAATCTGGCTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: IKRITLSCHVLS*IFLKSSESGFP Trigger: TGGAAAGCCAGATTCTGACGACTTTAGGAAAATTCAACTCAATACGTGACATGAAAGAGTTATTCTTTTGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| CDS-3UTR TCA 90 bp | CTTCTGCAAAGATTCCCTTTCCTCCACATAATCAACATCAGACAAGGCATGTCTTCCCCAGGACGGTGGTaGGGTACATGGCCAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: LLQRFPFLHIINIRQGMSSPGRW*GTWPGT Trigger: TGTTCCTGGCCATGTACCTCACCACCGTCCTGGGGA...AGACATGCCTTGTCTGATGTTGATTATGTGGAGGAAAGGGAATCTTTGCAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| CDS-3UTR TCA 90 bp | CATAAATGGTTGTATATGCCTGTACATATGAATCAGTGCATTGCAGATATGAGCTCCCCAGGACGGTGGTaGGGTACATGGCCAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: HKWLYMPVHMNQCIADMSSPGRW*GTWPGT Trigger: TGTTCCTGGCCATGTACCTCACCACCGTCCTGGGGA...GCTCATATCTGCAATGCACTGATTCATATGTACAGGCATATACAACCATTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| CDS-3UTR TCA 90 bp | CATAAATGGTTGTATATGCCTGTACATATGAATCAGTGCATTGCAGATATGAGCTGGGAGATGGCAGTTTaGTTCCTTTCTGTGGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: HKWLYMPVHMNQCIADMSWEMAV*FLSVVP Trigger: GGGCACCACAGAAAGGAATCAAACTGCCATCTCCCA...GCTCATATCTGCAATGCACTGATTCATATGTACAGGCATATACAACCATTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| CDS-3UTR TCA 90 bp | CTTGTGGGCTGCTTCTCAGAATCATTGGTTCAAGTATTATTTATGCTACTTCATTGGGAGATGGCAGTTTaGTTCCTTTCTGTGGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LVGCFSESLVQVLFMLLHWEMAV*FLSVVP Trigger: GGGCACCACAGAAAGGAATCAAACTGCCATCTCCCA...ATGAAGTAGCATAAATAATACTTGAACCAATGATTCTGAGAAGCAGCCCACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| CDS-3UTR TCA 90 bp | CTTGTGGGCTGCTTCTCAGAATCATTGGTTCAAGTATTATTTATGCTACTTCATATGACAATCTGGCCATaGGCAGGGTATGCAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: LVGCFSESLVQVLFMLLHMTIWP*AGYAAW Trigger: CCATGCTGCATACCCTGCTCATGGCCAGATTGTCAT...ATGAAGTAGCATAAATAATACTTGAACCAATGATTCTGAGAAGCAGCCCACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| CDS-3UTR CCA 90 bp | CTTCTGCAAAGATTCCCTTTCCTCCACATAATCAACATCAGACAAGGCATGTCTAAGGATGAGCACAAATaGAATGACAAGGATCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LLQRFPFLHIINIRQGMSKDEHK*NDKDQA Trigger: AGCCTGATCCTTGTCATTCCATTTGTGCTCATCCTT...AGACATGCCTTGTCTGATGTTGATTATGTGGAGGAAAGGGAATCTTTGCAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| CDS-3UTR CCA 90 bp | CTTGTGGGCTGCTTCTCAGAATCATTGGTTCAAGTATTATTTATGCTACTTCATGGAGGAACTGGGAGATaGCAGTTTGATTCCTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LVGCFSESLVQVLFMLLHGGTGR*QFDSFL Trigger: CAGAAAGGAATCAAACTGCCATCTCCCAGTTCCTCC...ATGAAGTAGCATAAATAATACTTGAACCAATGATTCTGAGAAGCAGCCCACAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| CDS-3UTR CCA 90 bp | CTTGTGGGCTGCTTCTCAGAATCATTGGTTCAAGTATTATTTATGCTACTTCATAAGGATGAGCACAAATaGAATGACAAGGATCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LVGCFSESLVQVLFMLLHKDEHK*NDKDQA Trigger: AGCCTGATCCTTGTCATTCCATTTGTGCTCATCCTT...ATGAAGTAGCATAAATAATACTTGAACCAATGATTCTGAGAAGCAGCCCACAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR CAA 72 bp | CATCAAAAGAATAACTCTTTCATGTCACGTATTGAGTaGAATTTTCCTAAAGTCGTCAGAATCTGGCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: HQKNNSFMSRIE*NFPKVVRIWLS Trigger: GGAAAGCCAGATTCTGACGACTTTAGGAAAATTCAACTCAATACGTGACATGAAAGAGTTATTCTTTTGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| 3UTR CAA 72 bp | GATCCTACTATATTAGACAGTAAGTTTGACACAGACTaGACGCAAACCTTAATTCAGAGAATTATCTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: DPTILDSKFDTD*TQTLIQRIICD Trigger: ATCACAGATAATTCTCTGAATTAAGGTTTGCGTCAAGTCTGTGTCAAACTTACTGTCTAATATAGTAGGATC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| CDS-3UTR CAA 90 bp | CTTCTGCAAAGATTCCCTTTCCTCCACATAATCAACATCAGACAAGGCATGTCTGGCATAGAACAGGTGTaGATGCTCTGTGGGGATGGG | + |
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Preference number: 5 (lower is better) Translates to: LLQRFPFLHIINIRQGMSGIEQV*MLCGDG Trigger: CCCATCCCCACAGAGCATCAACACCTGTTCTATGCC...AGACATGCCTTGTCTGATGTTGATTATGTGGAGGAAAGGGAATCTTTGCAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| CDS-3UTR CAA 90 bp | CTGGCTTTCCATGATCCTACTATATTAGACAGTAAGTTTGACACAGACTTGACGGGCATAGAACAGGTGTaGATGCTCTGTGGGGATGGG | + |
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Preference number: 5 (lower is better) Translates to: LAFHDPTILDSKFDTDLTGIEQV*MLCGDG Trigger: CCCATCCCCACAGAGCATCAACACCTGTTCTATGCC...CGTCAAGTCTGTGTCAAACTTACTGTCTAATATAGTAGGATCATGGAAAGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| CDS-3UTR CAA 90 bp | CTGGCTTTCCATGATCCTACTATATTAGACAGTAAGTTTGACACAGACTTGACGCTGGGAGATGGCAGTTaGATTCCTTTCTGTGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: LAFHDPTILDSKFDTDLTLGDGS*IPFCGA Trigger: GGCACCACAGAAAGGAATCAAACTGCCATCTCCCAG...CGTCAAGTCTGTGTCAAACTTACTGTCTAATATAGTAGGATCATGGAAAGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| CDS-3UTR CAA 90 bp | CTTCTGCAAAGATTCCCTTTCCTCCACATAATCAACATCAGACAAGGCATGTCTCAGGAAAAAGTACATTaGTGCCAGGCAGCCTGCATA | + |
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Preference number: 5 (lower is better) Translates to: LLQRFPFLHIINIRQGMSQEKVH*CQAACI Trigger: TATGCAGGCTGCCTGGCACAAATGTACTTTTTCCTG...AGACATGCCTTGTCTGATGTTGATTATGTGGAGGAAAGGGAATCTTTGCAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| CDS CCA 90 bp | AATGGAGGACACAATTCGTGCATAGGACACAAGGATGAGCACAAATaGAATGACAAGGATCAGGCTTCCCATGACAAATATCACCAATTC | + |
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Preference number: 5 (lower is better) Translates to: NGGHNSCIGHKDEHK*NDKDQASHDKYHQF Trigger: GAATTGGTGATATTTGTCATGGGAAGCCTGATCCTTGTCATTCCATTTGTGCTCATCCTTGTGTCCTATGCACGAATTGTGTCCTCCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078952.9 ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| CDS-3UTR CAA 90 bp | CATAAATGGTTGTATATGCCTGTACATATGAATCAGTGCATTGCAGATATGAGCCTGGGAGATGGCAGTTaGATTCCTTTCTGTGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: HKWLYMPVHMNQCIADMSLGDGS*IPFCGA Trigger: GGCACCACAGAAAGGAATCAAACTGCCATCTCCCAG...GCTCATATCTGCAATGCACTGATTCATATGTACAGGCATATACAACCATTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| CDS-3UTR CAA 90 bp | CATAAATGGTTGTATATGCCTGTACATATGAATCAGTGCATTGCAGATATGAGCAGCCTGCATAGGGAATaGATGGATCCTGGCTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: HKWLYMPVHMNQCIADMSSLHRE*MDPGSA Trigger: TGCAGAGCCAGGATCCATCAATTCCCTATGCAGGCT...GCTCATATCTGCAATGCACTGATTCATATGTACAGGCATATACAACCATTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| CDS-3UTR CAA 90 bp | CTGGCTTTCCATGATCCTACTATATTAGACAGTAAGTTTGACACAGACTTGACGCAGGAAAAAGTACATTaGTGCCAGGCAGCCTGCATA | + |
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Preference number: 5 (lower is better) Translates to: LAFHDPTILDSKFDTDLTQEKVH*CQAACI Trigger: TATGCAGGCTGCCTGGCACAAATGTACTTTTTCCTG...CGTCAAGTCTGTGTCAAACTTACTGTCTAATATAGTAGGATCATGGAAAGCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120401.9 ENSMUST00000170592.4 |
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| CDS CCA 72 bp | CACAATTCGTGCATAGGACACAAGGATGAGCACAAATaGAATGACAAGGATCAGGCTTCCCATGACAAATAT | + |
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Preference number: 6 (lower is better) Translates to: HNSCIGHKDEHK*NDKDQASHDKY Trigger: ATATTTGTCATGGGAAGCCTGATCCTTGTCATTCCATTTGTGCTCATCCTTGTGTCCTATGCACGAATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078952.9 ENSMUST00000120401.9 ENSMUST00000170592.4 |
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