RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR374 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000046881

Ensembl transcript IDs: ENSMUST00000209675.2, ENSMUST00000210435.4

Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGTCAGGCTTGGTGCCTGCCGGGGCTTTATCTGCTGAGTCAAGGTaGCAGCCATGTTGGTCTTGGTGGAGACTTAGGAGGACGATGCAA +
Preference number: 1 (lower is better)
Translates to: QSGLVPAGALSAESR*QPCWSWWRLRRTMQ
Trigger: TTGCATCGTCCTCCTAAGTCTCCACCAAGACCAACATGGCTGGCACCTTGACTCAGCAGATAAAGCCCCGGCAGGCACCAAGCCTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 90 bp CAGATACAGGGGGACACAGAGCACTCTTCTGGCCCCCATGGGTACTaGACCTATGTGGTGGTCAGGCACACATGTAGGCAAATGCTCACA +
Preference number: 1 (lower is better)
Translates to: QIQGDTEHSSGPHGY*TYVVVRHTCRQMLT
Trigger: TGTGAGCATTTGCCTACATGTGTGCCTGACCACCACATAGGTGCAGTACCCATGGGGGCCAGAAGAGTGCTCTGTGTCCCCCTGTATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 90 bp GGCCTTCCAAGGCCTGTCACAGTCCTGAGCCTCAGCTGCTCTTCATaGCTCTTTCAGGCCTTCAAAACCAGTACCACCTGGGTGACTTAC +
Preference number: 1 (lower is better)
Translates to: GLPRPVTVLSLSCSS*LFQAFKTSTTWVTY
Trigger: GTAAGTCACCCAGGTGGTACTGGTTTTGAAGGCCTGAAAGAGTCATGAAGAGCAGCTGAGGCTCAGGACTGTGACAGGCCTTGGAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 90 bp GAGGCTGCACCTTCATCAGTGGCCTTCCAAGGCCTGTCACAGTCCTaGGCCTCAGCTGCTCTTCATGACTCTTTCAGGCCTTCAAAACCA +
Preference number: 1 (lower is better)
Translates to: EAAPSSVAFQGLSQS*ASAALHDSFRPSKP
Trigger: TGGTTTTGAAGGCCTGAAAGAGTCATGAAGAGCAGCTGAGGCTCAGGACTGTGACAGGCCTTGGAAGGCCACTGATGAAGGTGCAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 90 bp GGAGGGATGTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTaGTCTCTTTTAGAACCCAAGACTACCAGCCCAGGGATGGCACCA +
Preference number: 1 (lower is better)
Translates to: GGMLLTGLLPLACSA*SLLEPKTTSPGMAP
Trigger: TGGTGCCATCCCTGGGCTGGTAGTCTTGGGTTCTAAAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 90 bp TCAGTCCTGGGTCATAAATTGCAACTGAGGCTGCACCTTCATCAGTaGCCTTCCAAGGCCTGTCACAGTCCTGAGCCTCAGCTGCTCTTC +
Preference number: 1 (lower is better)
Translates to: SVLGHKLQLRLHLHQ*PSKACHSPEPQLLF
Trigger: GAAGAGCAGCTGAGGCTCAGGACTGTGACAGGCCTTGGAAGGCCACTGATGAAGGTGCAGCCTCAGTTGCAATTTATGACCCAGGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 90 bp ATACAGAGGTCATGGAGGGATGTTCCTGGCTTGCTTTCCCTGGCTTaGTCAGCCTGTTCTCTTATAGAACCCAAGACTACCAGCCCAGGG +
Preference number: 1 (lower is better)
Translates to: IQRSWRDVPGLLSLA*SACSLIEPKTTSPG
Trigger: CCCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAACAGGCTGAGCAAGCCAGGGAAAGCAAGCCAGGAACATCCCTCCATGACCTCTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 90 bp GGCCAGGATTTAGGAGCTGATACAGAGGTCATGGAGGGATGTTCCTaGCTTGCTTTCCCTGGCTTGCTCAGCCTGTTCTCTTATAGAACC +
Preference number: 1 (lower is better)
Translates to: GQDLGADTEVMEGCS*LAFPGLLSLFSYRT
Trigger: GGTTCTATAAGAGAACAGGCTGAGCAAGCCAGGGAAAGCAAGCCAGGAACATCCCTCCATGACCTCTGTATCAGCTCCTAAATCCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 90 bp AGGACTTGGTGGAAAAACAAGACAGGAGAAAGTTGGAACCCCCAGTaGACCTGCAAGAAAGCTGTGGCCAATGAGCGGTGGTCAGGTTAT +
Preference number: 1 (lower is better)
Translates to: RTWWKNKTGESWNPQ*TCKKAVANERWSGY
Trigger: ATAACCTGACCACCGCTCATTGGCCACAGCTTTCTTGCAGGTGCACTGGGGGTTCCAACTTTCTCCTGTCTTGTTTTTCCACCAAGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 90 bp TGGAGGTCACAGGACAAGTATGTGAATAGCTTCACTTCTATCGTGTaGGTTCTGAGGATCCAACCTAGACAGTCAGGCTTGGTGCCTGCC +
Preference number: 1 (lower is better)
Translates to: WRSQDKYVNSFTSIV*VLRIQPRQSGLVPA
Trigger: GGCAGGCACCAAGCCTGACTGTCTAGGTTGGATCCTCAGAACTCACACGATAGAAGTGAAGCTATTCACATACTTGTCCTGTGACCTCCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 90 bp AGAAAGCTGTGGCCAATGAGCGGTGGTCAGGTTATAAGACTAGCATaGATAATTGATTCTGCCCTGGAGGCTGGAGAGATGGTTCAGTGG +
Preference number: 1 (lower is better)
Translates to: RKLWPMSGGQVIRLA*IIDSALEAGEMVQW
Trigger: CCACTGAACCATCTCTCCAGCCTCCAGGGCAGAATCAATTATCCATGCTAGTCTTATAACCTGACCACCGCTCATTGGCCACAGCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 90 bp CCAAAACCAAACCCAAAGAGCATCATGGTGCATTTCTTGTTTAGGTaGCATGGTCCCATTTGGGACTGTGTGCCCCATGGCCACTTGTCT +
Preference number: 1 (lower is better)
Translates to: PKPNPKSIMVHFLFR*HGPIWDCVPHGHLS
Trigger: AGACAAGTGGCCATGGGGCACACAGTCCCAAATGGGACCATGTCACCTAAACAAGAAATGCACCATGATGCTCTTTGGGTTTGGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 90 bp AGTTACAACTACCTGTACCCAAAGCTCCAAAGGACCTGTGCCATCTaGGGCATCTGTGGATATAACCCACACACACACAAACACACACAC +
Preference number: 1 (lower is better)
Translates to: SYNYLYPKLQRTCAI*GICGYNPHTHKHTH
Trigger: GTGTGTGTGTTTGTGTGTGTGTGGGTTATATCCACAGATGCCTCAGATGGCACAGGTCCTTTGGAGCTTTGGGTACAGGTAGTTGTAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 90 bp GTGCATGTGAGTGTCTCTGGGGTATTATACAGCACAGCACCCATGTaGAGGTCACAGGACAAGTATGTGAATAGCTTCACTTCTATCGTG +
Preference number: 1 (lower is better)
Translates to: VHVSVSGVLYSTAPM*RSQDKYVNSFTSIV
Trigger: CACGATAGAAGTGAAGCTATTCACATACTTGTCCTGTGACCTCCACATGGGTGCTGTGCTGTATAATACCCCAGAGACACTCACATGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 90 bp GGCCTCCATCTTCTGCACTGTTCTCAACATTATCTTCCAAGCTTCTaGACATCCTGTAGAGCTCTTAACGTCCCAATGGGTCATCTAGCT +
Preference number: 1 (lower is better)
Translates to: GLHLLHCSQHYLPSF*TSCRALNVPMGHLA
Trigger: AGCTAGATGACCCATTGGGACGTTAAGAGCTCTACAGGATGTTCAGAAGCTTGGAAGATAATGTTGAGAACAGTGCAGAAGATGGAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 90 bp TTGTATCAAATTGACACACAAAACCAGCCAGTTCATGTGGGTGTTTaGGGAGACCTGAAAGGATGTTTGATCCCCTGGAGCTGGAGTTAC +
Preference number: 1 (lower is better)
Translates to: LYQIDTQNQPVHVGV*GDLKGCLIPWSWSY
Trigger: GTAACTCCAGCTCCAGGGGATCAAACATCCTTTCAGGTCTCCTCAAACACCCACATGAACTGGCTGGTTTTGTGTGTCAATTTGATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 90 bp AGCAAGTTTGGGAGGAAAGGTTTTATTCAGTTTACATTTCCACTCTaGTGTTCATCACCAAAGGAAGTCAGGACTGGAACTAAGCAGGCC +
Preference number: 1 (lower is better)
Translates to: SKFGRKGFIQFTFPL*CSSPKEVRTGTKQA
Trigger: GGCCTGCTTAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAGAGTGGAAATGTAAACTGAATAAAACCTTTCCTCCCAAACTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 90 bp CTTCAAAACCAGTACCACCTGGGTGACTTACAAATTATCAAGTCCTaGTTCAGCACAAGGTATAACCTTGGCTATCTCTGGAACATAGCC +
Preference number: 1 (lower is better)
Translates to: LQNQYHLGDLQIIKS*FSTRYNLGYLWNIA
Trigger: GGCTATGTTCCAGAGATAGCCAAGGTTATACCTTGTGCTGAAGCAGGACTTGATAATTTGTAAGTCACCCAGGTGGTACTGGTTTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 90 bp CTTAGACTCAGCAGTAAAGAACACTGGCTGCTCTTCCAGAGGTACTaGGTTCAATTCCTAGAAACCACATGTAGCCAACATCAAAGTAAA +
Preference number: 1 (lower is better)
Translates to: LRLSSKEHWLLFQRY*VQFLETTCSQHQSK
Trigger: TTTACTTTGATGTTGGCTACATGTGGTTTCTAGGAATTGAACTCAGTACCTCTGGAAGAGCAGCCAGTGTTCTTTACTGCTGAGTCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 90 bp AGGAAGAAAGATGGCTCAGTGGTTAAGAACATTTGCTATTTTTCCTaGAGATCTGAGTCTGATTCCCAGCAACCACATCAAGTAGCTCAC +
Preference number: 1 (lower is better)
Translates to: RKKDGSVVKNICYFS*RSESDSQQPHQVAH
Trigger: GTGAGCTACTTGATGTGGTTGCTGGGAATCAGACTCAGATCTTCAGGAAAAATAGCAAATGTTCTTAACCACTGAGCCATCTTTCTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 90 bp GATAAAATGCCTTACAGCTGGATCTCATGGAGGCATTCCCTCACCTaGAGCTCCTTTGTTTGTGATAACTCCAGTTTGTATCAAATTGAC +
Preference number: 1 (lower is better)
Translates to: DKMPYSWISWRHSLT*SSFVCDNSSLYQID
Trigger: GTCAATTTGATACAAACTGGAGTTATCACAAACAAAGGAGCTTCAGGTGAGGGAATGCCTCCATGAGATCCAGCTGTAAGGCATTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 90 bp ACTCCAGTTTGTGTCAAGTTGACACACAAAACCAGCCAGTTCAATTaGCCCCTTGTCAACTTGACACATAAACACATCACTATTAAGCCT +
Preference number: 1 (lower is better)
Translates to: TPVCVKLTHKTSQFN*PLVNLTHKHITIKP
Trigger: AGGCTTAATAGTGATGTGTTTATGTGTCAAGTTGACAAGGGGTCAATTGAACTGGCTGGTTTTGTGTGTCAACTTGACACAAACTGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 90 bp CATGGTAGTTCACAACCATCTATAATGGAGTCTGTGGCCCTTTCCTaGTGTGAAGGCATATATTCAGTTAGAGCACTCATACACATAAAA +
Preference number: 1 (lower is better)
Translates to: HGSSQPSIMESVALS*CEGIYSVRALIHIK
Trigger: TTTTATGTGTATGAGTGCTCTAACTGAATATATGCCTTCACACCAGGAAAGGGCCACAGACTCCATTATAGATGGTTGTGAACTACCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 90 bp GCATGGATAATTGATTCTGCCCTGGAGGCTGGAGAGATGGTTCAGTaGTTAAATAAAGAACATTTACTGTTCTTAAAGAGGAAACGAGAA +
Preference number: 1 (lower is better)
Translates to: AWIIDSALEAGEMVQ*LNKEHLLFLKRKRE
Trigger: TTCTCGTTTCCTCTTTAAGAACAGTAAATGTTCTTTATTTAACCACTGAACCATCTCTCCAGCCTCCAGGGCAGAATCAATTATCCATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 90 bp TGGTACCAATTTGTCTTAGGGTTTCTATTCCTGCACAAAACATCATaGCCAAGAAGCAAGTTTGGGAGGAAAGGTTTTATTCAGTTTACA +
Preference number: 1 (lower is better)
Translates to: WYQFVLGFLFLHKTS*PRSKFGRKGFIQFT
Trigger: TGTAAACTGAATAAAACCTTTCCTCCCAAACTTGCTTCTTGGTCATGATGTTTTGTGCAGGAATAGAAACCCTAAGACAAATTGGTACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 90 bp GAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATaGATTGGCAGGATAAACATTGTAAAAATGGCTATCTTGCCAAAA +
Preference number: 1 (lower is better)
Translates to: EIKEDLRRWKDLPCS*IGRINIVKMAILPK
Trigger: TTTTGGCAAGATAGCCATTTTTACAATGTTTATCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR TCA 90 bp CTAGACAGTCAGGCTTGGTGCCTGCCGGGGCTTTATCTGCTGAGTCAAGGTGCCAGTGCTAGGATGATGTaGCAGATGTGTGTCAGCATG +
Preference number: 2 (lower is better)
Translates to: LDSQAWCLPGLYLLSQGASARMM*QMCVSM
Trigger: CATGCTGACACACATCTGTCACATCATCCTAGCACT...GGCACCTTGACTCAGCAGATAAAGCCCCGGCAGGCACCAAGCCTGACTGTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR TCA 90 bp GGCCAGGAAGCAGGAGCTGATGCAGAGACCATGGAGGGATGTTACTTACTGGCTCCCCCAGTGCTAGGATaGTGTGACAGATGTGTGTCA +
Preference number: 2 (lower is better)
Translates to: GQEAGADAETMEGCYLLAPPVLG*CDRCVS
Trigger: TGACACACATCTGTCACATCATCCTAGCACTGGGGG...AGCCAGTAAGTAACATCCCTCCATGGTCTCTGCATCAGCTCCTGCTTCCTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp GGCCAGGAAGCAGGAGCTGATGCAGAGACCATGGAGGGATGTTACTTACTGGCTAGTTGGAACCCCCAGTaGACCTGCAAGAAAGCTGTG +
Preference number: 2 (lower is better)
Translates to: GQEAGADAETMEGCYLLASWNPQ*TCKKAV
Trigger: CACAGCTTTCTTGCAGGTGCACTGGGGGTTCCAACT...AGCCAGTAAGTAACATCCCTCCATGGTCTCTGCATCAGCTCCTGCTTCCTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp GGCCAGGAAGCAGGAGCTGATGCAGAGACCATGGAGGGATGTTACTTACTGGCTGGGATTAAAGACCTGTaGCACCATTGCCGAGCAAGC +
Preference number: 2 (lower is better)
Translates to: GQEAGADAETMEGCYLLAGIKDL*HHCRAS
Trigger: GCTTGCTCGGCAATGGTGGCACAGGTCTTTAATCCC...AGCCAGTAAGTAACATCCCTCCATGGTCTCTGCATCAGCTCCTGCTTCCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 90 bp GATACAGAGGTCATGGAGGGATGTTCCTGGCTTGCTTTCCCTGGCTaGCTCAGCCTGTTCTCTTATAGAACCCAAGACTACCAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: DTEVMEGCSWLAFPG*LSLFSYRTQDYQPR
Trigger: CCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAACAGGCTGAGCAAGCCAGGGAAAGCAAGCCAGGAACATCCCTCCATGACCTCTGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp CTAGACAGTCAGGCTTGGTGCCTGCCGGGGCTTTATCTGCTGAGTCAAGGTGCCATGACACAGGTGCACTaGCACACAGTCACACATATA +
Preference number: 2 (lower is better)
Translates to: LDSQAWCLPGLYLLSQGAMTQVH*HTVTHI
Trigger: TATATGTGTGACTGTGTGGCAGTGCACCTGTGTCAT...GGCACCTTGACTCAGCAGATAAAGCCCCGGCAGGCACCAAGCCTGACTGTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp GGCCAGGAAGCAGGAGCTGATGCAGAGACCATGGAGGGATGTTACTTACTGGCTAAGCCTCAACTCCTTTaGATGACCCCTTCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: GQEAGADAETMEGCYLLAKPQLL*MTPSVL
Trigger: CAGGACTGAAGGGGTCATGCAAAGGAGTTGAGGCTT...AGCCAGTAAGTAACATCCCTCCATGGTCTCTGCATCAGCTCCTGCTTCCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp CTAGACAGTCAGGCTTGGTGCCTGCCGGGGCTTTATCTGCTGAGTCAAGGTGCCCTTAGCTTCCAAGACTaGACAAGATTTGGTGTGTCC +
Preference number: 2 (lower is better)
Translates to: LDSQAWCLPGLYLLSQGALSFQD*TRFGVS
Trigger: GGACACACCAAATCTTGTCCAGTCTTGGAAGCTAAG...GGCACCTTGACTCAGCAGATAAAGCCCCGGCAGGCACCAAGCCTGACTGTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 90 bp AAGCCTCAACTCCTTTGCATGACCCCTTCAGTCCTGGGTCATAAATaGCAACTGAGGCTGCACCTTCATCAGTGGCCTTCCAAGGCCTGT +
Preference number: 2 (lower is better)
Translates to: KPQLLCMTPSVLGHK*QLRLHLHQWPSKAC
Trigger: ACAGGCCTTGGAAGGCCACTGATGAAGGTGCAGCCTCAGTTGCAATTTATGACCCAGGACTGAAGGGGTCATGCAAAGGAGTTGAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp CTAGACAGTCAGGCTTGGTGCCTGCCGGGGCTTTATCTGCTGAGTCAAGGTGCCGATCTCCCATGCTCATaGATTGGCAGGATAAACATT +
Preference number: 2 (lower is better)
Translates to: LDSQAWCLPGLYLLSQGADLPCS*IGRINI
Trigger: AATGTTTATCCTGCCAATCCATGAGCATGGGAGATC...GGCACCTTGACTCAGCAGATAAAGCCCCGGCAGGCACCAAGCCTGACTGTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR TCA 90 bp GGCCAGGAAGCAGGAGCTGATGCAGAGACCATGGAGGGATGTTACTTACTGGCTGAGCAGAGAGAACCATaGGAAGAAGCAGCCAAAATA +
Preference number: 2 (lower is better)
Translates to: GQEAGADAETMEGCYLLAEQREP*EEAAKI
Trigger: TATTTTGGCTGCTTCTTCTCATGGTTCTCTCTGCTC...AGCCAGTAAGTAACATCCCTCCATGGTCTCTGCATCAGCTCCTGCTTCCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp CTAGACAGTCAGGCTTGGTGCCTGCCGGGGCTTTATCTGCTGAGTCAAGGTGCCCTGATGATCTCACTTTaGAGGAGAGATTCAATACCA +
Preference number: 2 (lower is better)
Translates to: LDSQAWCLPGLYLLSQGALMISL*RRDSIP
Trigger: TGGTATTGAATCTCTCCTCCAAAGTGAGATCATCAG...GGCACCTTGACTCAGCAGATAAAGCCCCGGCAGGCACCAAGCCTGACTGTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 90 bp GGCTCAGTAGGTGCGGGGCTTGCTGTCAAGCCTGATGATCTCACTTaGGAGGAGAGATTCAATACCACAAGTTATCCTCTACCTCTACAC +
Preference number: 2 (lower is better)
Translates to: GSVGAGLAVKPDDLT*EERFNTTSYPLPLH
Trigger: GTGTAGAGGTAGAGGATAACTTGTGGTATTGAATCTCTCCTCCAAAGTGAGATCATCAGGCTTGACAGCAAGCCCCGCACCTACTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp GAGGAGGAGCCCCACCCACTCTTTGGTTTACAGTTTGAAATATACAGTCCACACGGGACTAGACAAGGCTaGCCACTTTCTCCCTACCTT +
Preference number: 2 (lower is better)
Translates to: EEEPHPLFGLQFEIYSPHGTRQG*PLSPYL
Trigger: AAGGTAGGGAGAAAGTGGGCAGCCTTGTCTAGTCCC...GTGTGGACTGTATATTTCAAACTGTAAACCAAAGAGTGGGTGGGGCTCCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp GGTAGTTCACAACCATCTATAATGGAGTCTGTGGCCCTTTCCTGGTGTGAAGGCCAGCACCATTTCAGGTaGCTAACAGCCACCTGTAAC +
Preference number: 2 (lower is better)
Translates to: GSSQPSIMESVALSWCEGQHHFR*LTATCN
Trigger: GTTACAGGTGGCTGTTAGCCACCTGAAATGGTGCTG...GCCTTCACACCAGGAAAGGGCCACAGACTCCATTATAGATGGTTGTGAACTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp GAGGAGGAGCCCCACCCACTCTTTGGTTTACAGTTTGAAATATACAGTCCACACAAGACAGGAGAAAGTTaGAACCCCCAGTGCACCTGC +
Preference number: 2 (lower is better)
Translates to: EEEPHPLFGLQFEIYSPHKTGES*NPQCTC
Trigger: GCAGGTGCACTGGGGGTTCCAACTTTCTCCTGTCTT...GTGTGGACTGTATATTTCAAACTGTAAACCAAAGAGTGGGTGGGGCTCCTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp GATGTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTCTCTTTTAGAACAGGCCAGAGGAGCTaGAGGAAGAAAGATGGCTCA +
Preference number: 2 (lower is better)
Translates to: DVTYWLASPGLLSLLSFRTGQRS*RKKDGS
Trigger: TGAGCCATCTTTCTTCCTCCAGCTCCTCTGGCCTGT...TCTAAAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp AGGGCACAGTCACAGTCAAAAGCAGAATCAAACTCCAACCATCCAATGTCTAGAACAGGCTCCATCTGCTaGAGGAAGAAGCCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: RAQSQSKAESNSNHPMSRTGSIC*RKKPLL
Trigger: CAGCAAGGGCTTCTTCCTGCAGCAGATGGAGCCTGT...TCTAGACATTGGATGGTTGGAGTTTGATTCTGCTTTTGACTGTGACTGTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp AGGGCACAGTCACAGTCAAAAGCAGAATCAAACTCCAACCATCCAATGTCTAGACCTGCAAGAAAGCTGTaGCCAATGAGCGGTGGTCAG +
Preference number: 2 (lower is better)
Translates to: RAQSQSKAESNSNHPMSRPARKL*PMSGGQ
Trigger: CTGACCACCGCTCATTGGCCACAGCTTTCTTGCAGG...TCTAGACATTGGATGGTTGGAGTTTGATTCTGCTTTTGACTGTGACTGTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp AGGGCACAGTCACAGTCAAAAGCAGAATCAAACTCCAACCATCCAATGTCTAGACTGCACCTTCATCAGTaGCCTTCCAAGGCCTGTCAC +
Preference number: 2 (lower is better)
Translates to: RAQSQSKAESNSNHPMSRLHLHQ*PSKACH
Trigger: GTGACAGGCCTTGGAAGGCCACTGATGAAGGTGCAG...TCTAGACATTGGATGGTTGGAGTTTGATTCTGCTTTTGACTGTGACTGTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp GATGTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTCTCTTTTAGAAGCAGTAAAGAACACTaGCTGCTCTTCCAGAGGTAC +
Preference number: 2 (lower is better)
Translates to: DVTYWLASPGLLSLLSFRSSKEH*LLFQRY
Trigger: GTACCTCTGGAAGAGCAGCCAGTGTTCTTTACTGCT...TCTAAAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp ACATCCTGTAGAGCTCTTAACGTCCCAATGGGTCATCTAGCTCAAAGTTCCAAATTCTGCCCTGGAGGCTaGAGAGATGGTTCAGTGGTT +
Preference number: 2 (lower is better)
Translates to: TSCRALNVPMGHLAQSSKFCPGG*RDGSVV
Trigger: AACCACTGAACCATCTCTCCAGCCTCCAGGGCAGAA...TTTGGAACTTTGAGCTAGATGACCCATTGGGACGTTAAGAGCTCTACAGGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp CCACATGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAGGGACGAGGCTGTTCTaGAGAGATGGTTCAGTAGTT +
Preference number: 2 (lower is better)
Translates to: PHVANIKVNGEKLEAIPLGTRLF*RDGSVV
Trigger: AACTACTGAACCATCTCTGCAGAACAGCCTCGTCCC...TAGTGGGATTGCTTCCAGCTTCTCTCCATTTACTTTGATGTTGGCTACATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp GATGTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTCTCTTTTAGAATGCAAGCCAGGTGGTaGTGGCACATACTTTTAATC +
Preference number: 2 (lower is better)
Translates to: DVTYWLASPGLLSLLSFRMQARW*WHILLI
Trigger: GATTAAAAGTATGTGCCACCACCACCTGGCTTGCAT...TCTAAAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 90 bp AAGAATGTCACTAGACATGGTGGTACACACATGCAATCTCAGCTTTaGGAAAGCCTAGATGAGGGATGTGGGTTGCTGCTGAATGAAGTG +
Preference number: 2 (lower is better)
Translates to: KNVTRHGGTHMQSQL*ESLDEGCGLLLNEV
Trigger: CACTTCATTCAGCAGCAACCCACATCCCTCATCTAGGCTTTCCAAAAGCTGAGATTGCATGTGTGTACCACCATGTCTAGTGACATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR TCA 90 bp AGGGCACAGTCACAGTCAAAAGCAGAATCAAACTCCAACCATCCAATGTCTAGAAGTTACAGGTGGTTGTaGACCATCCAAGTGGTTCTG +
Preference number: 2 (lower is better)
Translates to: RAQSQSKAESNSNHPMSRSYRWL*TIQVVL
Trigger: CAGAACCACTTGGATGGTTCACAACCACCTGTAACT...TCTAGACATTGGATGGTTGGAGTTTGATTCTGCTTTTGACTGTGACTGTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR TCA 90 bp AGGGCACAGTCACAGTCAAAAGCAGAATCAAACTCCAACCATCCAATGTCTAGAATTTTCTCTCCCCTCTaGAATTTCACAAGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: RAQSQSKAESNSNHPMSRIFSPL*NFTSQA
Trigger: GGCCTGGCTTGTGAAATTTCAGAGGGGAGAGAAAAT...TCTAGACATTGGATGGTTGGAGTTTGATTCTGCTTTTGACTGTGACTGTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR TCA 90 bp GGGTTTATTCAGTTTACACTTCCATATTGCTGTTCATCAACAAAGGAAATCAGGGGCCTGTCACAGTCCTaGGCCTCAGCTGCTCTTCAT +
Preference number: 2 (lower is better)
Translates to: GFIQFTLPYCCSSTKEIRGLSQS*ASAALH
Trigger: ATGAAGAGCAGCTGAGGCTCAGGACTGTGACAGGCC...CCTGATTTCCTTTGTTGATGAACAGCAATATGGAAGTGTAAACTGAATAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp GTTATCCTCTACCTCTACACAGGGGTCATGACACAGGTGCACTGCCACACAGTCACTCACACACAAACATaGACACTCTTTTCTAGAATA +
Preference number: 2 (lower is better)
Translates to: VILYLYTGVMTQVHCHTVTHTQT*TLFSRI
Trigger: TATTCTAGAAAAGAGTGTGCATGTTTGTGTGTGAGT...GACTGTGTGGCAGTGCACCTGTGTCATGACCCCTGTGTAGAGGTAGAGGATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp ACATCCTGTAGAGCTCTTAACGTCCCAATGGGTCATCTAGCTCAAAGTTCCAAAATGAATTTGGCAGTCTaGAAGAGCAGCCAGTGCTCT +
Preference number: 2 (lower is better)
Translates to: TSCRALNVPMGHLAQSSKMNLAV*KSSQCS
Trigger: AGAGCACTGGCTGCTCTTGCAGACTGCCAAATTCAT...TTTGGAACTTTGAGCTAGATGACCCATTGGGACGTTAAGAGCTCTACAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp GATTCAATACCACAAGTTATCCTCTACCTCTACACAGGGGTCATGACACAGGTGGTGACTCCATCACTGTaGAAGTGTGGTCGTTATAAG +
Preference number: 2 (lower is better)
Translates to: DSIPQVILYLYTGVMTQVVTPSL*KCGRYK
Trigger: CTTATAACGACCACACTTCCACAGTGATGGAGTCAC...CACCTGTGTCATGACCCCTGTGTAGAGGTAGAGGATAACTTGTGGTATTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp ATTCAAAGTCTCTTAACTGTAGGCTCCACTAAAATACTTCCTTCAAGAGGGAACCTAGACAGTCAGGCTTaGTGCCTGCCGGGGCTTTAT +
Preference number: 2 (lower is better)
Translates to: IQSLLTVGSTKILPSRGNLDSQA*CLPGLY
Trigger: ATAAAGCCCCGGCAGGCACCAAGCCTGACTGTCTAG...GTTCCCTCTTGAAGGAAGTATTTTAGTGGAGCCTACAGTTAAGAGACTTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR TCA 90 bp ATTCAAAGTCTCTTAACTGTAGGCTCCACTAAAATACTTCCTTCAAGAGGGAACAAGAAGCCCTTGCTGTaGCAGGGGAGGGCTACATTT +
Preference number: 2 (lower is better)
Translates to: IQSLLTVGSTKILPSRGNKKPLL*QGRATF
Trigger: AAATGTAGCCCTCCCCTGTCACAGCAAGGGCTTCTT...GTTCCCTCTTGAAGGAAGTATTTTAGTGGAGCCTACAGTTAAGAGACTTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp ATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAAATTGGAAAGCCTCCATACACGTGTaGATGCATGCATGCGTGTGT +
Preference number: 2 (lower is better)
Translates to: ISQSNSTTKGDQGDTNWKASIHV*MHACVC
Trigger: ACACACGCATGCATGCATGCACACGTGTATGGAGGC...TTTCCAATTTGTATCCCCTTGATCTCCTTTTGTTGTCGAATTGCTCTGGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp TTCTCCATGTTACTTATCCAATCCTTGACCTTCATAACTTTCATCTGTTCTTTGGCAGGAAGAAGCCCTTaGTGTGACAGGGGAGGGCTA +
Preference number: 2 (lower is better)
Translates to: FSMLLIQSLTFITFICSLAGRSP*CDRGGL
Trigger: TAGCCCTCCCCTGTCACAGCAAGGGCTTCTTCCTGC...CAAAGAACAGATGAAAGTTATGAAGGTCAAGGATTGGATAAGTAACATGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp GATGTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTCTCTTTTAGACAAAGAGCATCATGGTaGATTTCTTGTTTAGGTGAC +
Preference number: 2 (lower is better)
Translates to: DVTYWLASPGLLSLLSFRQRASW*ISCLGD
Trigger: GTCACCTAAACAAGAAATGCACCATGATGCTCTTTG...TCTAAAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp ATTCAAAGTCTCTTAACTGTAGGCTCCACTAAAATACTTCCTTCAAGAGGGAACTCTGCTGAGTCAAGGTaGCAGCCATGTTGGTCTTGG +
Preference number: 2 (lower is better)
Translates to: IQSLLTVGSTKILPSRGNSAESR*QPCWSW
Trigger: CCAAGACCAACATGGCTGGCACCTTGACTCAGCAGA...GTTCCCTCTTGAAGGAAGTATTTTAGTGGAGCCTACAGTTAAGAGACTTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp GATGTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTCTCTTTTAGAATGGTGGTACACACATaGAATCTCAGCTTTTGGAAA +
Preference number: 2 (lower is better)
Translates to: DVTYWLASPGLLSLLSFRMVVHT*NLSFWK
Trigger: TTTCCAAAAGCTGAGATTGCATGTGTGTACCACCAT...TCTAAAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp GGGTTTATTCAGTTTACACTTCCATATTGCTGTTCATCAACAAAGGAAATCAGGGGGATGTTCCTGGCTTaGTTTCCCTGGCTTGCTCAG +
Preference number: 2 (lower is better)
Translates to: GFIQFTLPYCCSSTKEIRGMFLA*FPWLAQ
Trigger: CTGAGCAAGCCAGGGAAAGCAAGCCAGGAACATCCC...CCTGATTTCCTTTGTTGATGAACAGCAATATGGAAGTGTAAACTGAATAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp GATGTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTCTCTTTTAGACCCATGCTCATGGATTaGCAGGATAAACATTGTAAA +
Preference number: 2 (lower is better)
Translates to: DVTYWLASPGLLSLLSFRPMLMD*QDKHCK
Trigger: TTTACAATGTTTATCCTGCCAATCCATGAGCATGGG...TCTAAAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp TTCTCCATGTTACTTATCCAATCCTTGACCTTCATAACTTTCATCTGTTCTTTGCACAGAGCACTCTTCTaGCCCCCATGGGTACTGCAC +
Preference number: 2 (lower is better)
Translates to: FSMLLIQSLTFITFICSLHRALF*PPWVLH
Trigger: GTGCAGTACCCATGGGGGCCAGAAGAGTGCTCTGTG...CAAAGAACAGATGAAAGTTATGAAGGTCAAGGATTGGATAAGTAACATGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp GATGTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTCTCTTTTAGAACTGTGTTACCATATTaGTTTTGCCCATCTCAGGAT +
Preference number: 2 (lower is better)
Translates to: DVTYWLASPGLLSLLSFRTVLPY*FCPSQD
Trigger: ATCCTGAGATGGGCAAAACCAATATGGTAACACAGT...TCTAAAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 90 bp TCACCTGAAGCTCCTTTGTTTGTGATAACTCCAGTTTGTATCAAATaGACACACAAAACCAGCCAGTTCATGTGGGTGTTTGAGGAGACC +
Preference number: 2 (lower is better)
Translates to: SPEAPLFVITPVCIK*THKTSQFMWVFEET
Trigger: GGTCTCCTCAAACACCCACATGAACTGGCTGGTTTTGTGTGTCAATTTGATACAAACTGGAGTTATCACAAACAAAGGAGCTTCAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp GATGTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTCTCTTTTAGAAGATTTAGGACTTGGTaGAAAAACAAGACAGGAGAA +
Preference number: 2 (lower is better)
Translates to: DVTYWLASPGLLSLLSFRRFRTW*KNKTGE
Trigger: TTCTCCTGTCTTGTTTTTCCACCAAGTCCTAAATCT...TCTAAAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp ACATCCTGTAGAGCTCTTAACGTCCCAATGGGTCATCTAGCTCAAAGTTCCAAAAGCTTTAGTCAAATGTaGGCACTGATTGTTAAGGCC +
Preference number: 2 (lower is better)
Translates to: TSCRALNVPMGHLAQSSKSFSQM*ALIVKA
Trigger: GGCCTTAACAATCAGTGCCCACATTTGACTAAAGCT...TTTGGAACTTTGAGCTAGATGACCCATTGGGACGTTAAGAGCTCTACAGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp GATGTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTCTCTTTTAGAGATGGGATGTTGGGATaGTATCTGAATATATACATA +
Preference number: 2 (lower is better)
Translates to: DVTYWLASPGLLSLLSFRDGMLG*YLNIYI
Trigger: TATGTATATATTCAGATAGCATCCCAACATCCCATC...TCTAAAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp TTCTCCATGTTACTTATCCAATCCTTGACCTTCATAACTTTCATCTGTTCTTTGTTTCAGGCCAGCTGCTaGTACACAGAGAGACCCTGT +
Preference number: 2 (lower is better)
Translates to: FSMLLIQSLTFITFICSLFQASC*YTERPC
Trigger: ACAGGGTCTCTCTGTGTAGCAGCAGCTGGCCTGAAA...CAAAGAACAGATGAAAGTTATGAAGGTCAAGGATTGGATAAGTAACATGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp GAGGAGGAGCCCCACCCACTCTTTGGTTTACAGTTTGAAATATACAGTCCACACAGAAAGATGGCTCAGTaGTTAAGAACATTTGCTATT +
Preference number: 2 (lower is better)
Translates to: EEEPHPLFGLQFEIYSPHRKMAQ*LRTFAI
Trigger: AATAGCAAATGTTCTTAACCACTGAGCCATCTTTCT...GTGTGGACTGTATATTTCAAACTGTAAACCAAAGAGTGGGTGGGGCTCCTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 90 bp GACAGATGTGTGTCAGCATGCTTAGCTTCTAACTGTGTTACCATATaGGTTTTGCCCATCTCAGGATATCAGGAGATGATAGAATGCTTA +
Preference number: 2 (lower is better)
Translates to: DRCVSACLASNCVTI*VLPISGYQEMIECL
Trigger: TAAGCATTCTATCATCTCCTGATATCCTGAGATGGGCAAAACCAATATGGTAACACAGTTAGAAGCTAAGCATGCTGACACACATCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR TCA 90 bp GGGTTTATTCAGTTTACACTTCCATATTGCTGTTCATCAACAAAGGAAATCAGGGTTCATGTGGGTGTTTaGGGAGACCTGAAAGGATGT +
Preference number: 2 (lower is better)
Translates to: GFIQFTLPYCCSSTKEIRVHVGV*GDLKGC
Trigger: ACATCCTTTCAGGTCTCCTCAAACACCCACATGAAC...CCTGATTTCCTTTGTTGATGAACAGCAATATGGAAGTGTAAACTGAATAAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp TGCTCATGGATTGGCAGGATAAACATTGTAAAAATGGCTATCTTGCCAAAAGCATCTGTGGCCCTTTCCTaGTGTGAAGGCATATATTCA +
Preference number: 2 (lower is better)
Translates to: CSWIGRINIVKMAILPKASVALS*CEGIYS
Trigger: TGAATATATGCCTTCACACCAGGAAAGGGCCACAGA...TGCTTTTGGCAAGATAGCCATTTTTACAATGTTTATCCTGCCAATCCATGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp TTCTCCATGTTACTTATCCAATCCTTGACCTTCATAACTTTCATCTGTTCTTTGTCCAATGTCTTGTTCTaGCCTCCATACACGTGTGCA +
Preference number: 2 (lower is better)
Translates to: FSMLLIQSLTFITFICSLSNVLF*PPYTCA
Trigger: TGCACACGTGTATGGAGGCCAGAACAAGACATTGGA...CAAAGAACAGATGAAAGTTATGAAGGTCAAGGATTGGATAAGTAACATGGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp GGGTTTATTCAGTTTACACTTCCATATTGCTGTTCATCAACAAAGGAAATCAGGTTGATGCAAGCCAGGTaGTGGTGGCACATACTTTTA +
Preference number: 2 (lower is better)
Translates to: GFIQFTLPYCCSSTKEIRLMQAR*WWHILL
Trigger: TAAAAGTATGTGCCACCACCACCTGGCTTGCATCAA...CCTGATTTCCTTTGTTGATGAACAGCAATATGGAAGTGTAAACTGAATAAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 90 bp TGTGCTCTCAGTAAACACTTCCCAGAAGATTTCACCTTGATGATATaGGTCTCTTCTTATTCACCACTAATTTCTTACTTCCAGCTAACC +
Preference number: 2 (lower is better)
Translates to: CALSKHFPEDFTLMI*VSSYSPLISYFQLT
Trigger: GGTTAGCTGGAAGTAAGAAATTAGTGGTGAATAAGAAGAGACCAATATCATCAAGGTGAAATCTTCTGGGAAGTGTTTACTGAGAGCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp GGGTTTATTCAGTTTACACTTCCATATTGCTGTTCATCAACAAAGGAAATCAGGAGACTGGACAAGATTTaGTGTGTCCAGGATAGTACA +
Preference number: 2 (lower is better)
Translates to: GFIQFTLPYCCSSTKEIRRLDKI*CVQDST
Trigger: TGTACTATCCTGGACACACCAAATCTTGTCCAGTCT...CCTGATTTCCTTTGTTGATGAACAGCAATATGGAAGTGTAAACTGAATAAACCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 90 bp GAGGAGGGACTATCATCAATGTGTGCTAGAGTCTTAACTGTGTCCTaGACCTTGTTCTTTGAATGTGTTAATTACTTTTCTCATTACTCT +
Preference number: 2 (lower is better)
Translates to: EEGLSSMCARVLTVS*TLFFECVNYFSHYS
Trigger: AGAGTAATGAGAAAAGTAATTAACACATTCAAAGAACAAGGTCAAGGACACAGTTAAGACTCTAGCACACATTGATGATAGTCCCTCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp GGGTTTATTCAGTTTACACTTCCATATTGCTGTTCATCAACAAAGGAAATCAGGCAGGAGATGATAGAATaGTTATGTGATCATAGGAGC +
Preference number: 2 (lower is better)
Translates to: GFIQFTLPYCCSSTKEIRQEMIE*LCDHRS
Trigger: GCTCCTATGATCACATAAGCATTCTATCATCTCCTG...CCTGATTTCCTTTGTTGATGAACAGCAATATGGAAGTGTAAACTGAATAAACCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp GGGTTTATTCAGTTTACACTTCCATATTGCTGTTCATCAACAAAGGAAATCAGGTTACCATATTGGTTTTaGCCATCTCAGGATATCAGG +
Preference number: 2 (lower is better)
Translates to: GFIQFTLPYCCSSTKEIRLPYWF*PSQDIR
Trigger: CCTGATATCCTGAGATGGGCAAAACCAATATGGTAA...CCTGATTTCCTTTGTTGATGAACAGCAATATGGAAGTGTAAACTGAATAAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CCA 90 bp TCAATTATCCATTCTAGTCTTATGATCTGTGGAGCTTGCAGTATAAACAAGCCCCAACATCAAAGTAAATaGAGAGAAGCTGGAAGCAAT +
Preference number: 2 (lower is better)
Translates to: SIIHSSLMICGACSINKPQHQSK*REAGSN
Trigger: ATTGCTTCCAGCTTCTCTCCATTTACTTTGATGTTG...GGGCTTGTTTATACTGCAAGCTCCACAGATCATAAGACTAGAATGGATAATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR GCA 90 bp GGGTTTATTCAGTTTACACTTCCATATTGCTGTTCATCAACAAAGGAAATCAGGCAAATTATCAAGTCCTaGTTCAGCACAAGGTATAAC +
Preference number: 2 (lower is better)
Translates to: GFIQFTLPYCCSSTKEIRQIIKS*FSTRYN
Trigger: GTTATACCTTGTGCTGAAGCAGGACTTGATAATTTG...CCTGATTTCCTTTGTTGATGAACAGCAATATGGAAGTGTAAACTGAATAAACCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR TCA 90 bp TTCTCCATGTTACTTATCCAATCCTTGACCTTCATAACTTTCATCTGTTCTTTGATTTGCTATTTTTCCTaGAGATCTGAGTCTGATTCC +
Preference number: 2 (lower is better)
Translates to: FSMLLIQSLTFITFICSLICYFS*RSESDS
Trigger: GGAATCAGACTCAGATCTTCAGGAAAAATAGCAAAT...CAAAGAACAGATGAAAGTTATGAAGGTCAAGGATTGGATAAGTAACATGGAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 72 bp GGGGACACAGAGCACTCTTCTGGCCCCCATGGGTACTaGACCTATGTGGTGGTCAGGCACACATGTAGGCAA +
Preference number: 3 (lower is better)
Translates to: GDTEHSSGPHGY*TYVVVRHTCRQ
Trigger: TTGCCTACATGTGTGCCTGACCACCACATAGGTGCAGTACCCATGGGGGCCAGAAGAGTGCTCTGTGTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp GATACAGGGGGACACAGAGCACTCTTCTGGCCCCCATaGGTACTGCACCTATGTGGTGGTCAGGCACACATG +
Preference number: 3 (lower is better)
Translates to: DTGGHRALFWPP*VLHLCGGQAHM
Trigger: CATGTGTGCCTGACCACCACATAGGTGCAGTACCCATGGGGGCCAGAAGAGTGCTCTGTGTCCCCCTGTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 72 bp TTGGTGCCTGCCGGGGCTTTATCTGCTGAGTCAAGGTaGCAGCCATGTTGGTCTTGGTGGAGACTTAGGAGG +
Preference number: 3 (lower is better)
Translates to: LVPAGALSAESR*QPCWSWWRLRR
Trigger: CCTCCTAAGTCTCCACCAAGACCAACATGGCTGGCACCTTGACTCAGCAGATAAAGCCCCGGCAGGCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 72 bp CCTTCATCAGTGGCCTTCCAAGGCCTGTCACAGTCCTaGGCCTCAGCTGCTCTTCATGACTCTTTCAGGCCT +
Preference number: 3 (lower is better)
Translates to: PSSVAFQGLSQS*ASAALHDSFRP
Trigger: AGGCCTGAAAGAGTCATGAAGAGCAGCTGAGGCTCAGGACTGTGACAGGCCTTGGAAGGCCACTGATGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 72 bp ACAGGCTCCATCTGCTGCAGGAAGAAGCCCTTGCTGTaGCAGGGGAGGGCTACATTTACCAAGAGCTTGCAA +
Preference number: 3 (lower is better)
Translates to: TGSICCRKKPLL*QGRATFTKSLQ
Trigger: TTGCAAGCTCTTGGTAAATGTAGCCCTCCCCTGTCACAGCAAGGGCTTCTTCCTGCAGCAGATGGAGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 72 bp AGGCCTGTCACAGTCCTGAGCCTCAGCTGCTCTTCATaGCTCTTTCAGGCCTTCAAAACCAGTACCACCTGG +
Preference number: 3 (lower is better)
Translates to: RPVTVLSLSCSS*LFQAFKTSTTW
Trigger: CCAGGTGGTACTGGTTTTGAAGGCCTGAAAGAGTCATGAAGAGCAGCTGAGGCTCAGGACTGTGACAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp AGCACTCTTCTGGCCCCCATGGGTACTGCACCTATGTaGTGGTCAGGCACACATGTAGGCAAATGCTCACAT +
Preference number: 3 (lower is better)
Translates to: STLLAPMGTAPM*WSGTHVGKCSH
Trigger: ATGTGAGCATTTGCCTACATGTGTGCCTGACCACCACATAGGTGCAGTACCCATGGGGGCCAGAAGAGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp GGTCATAAATTGCAACTGAGGCTGCACCTTCATCAGTaGCCTTCCAAGGCCTGTCACAGTCCTGAGCCTCAG +
Preference number: 3 (lower is better)
Translates to: GHKLQLRLHLHQ*PSKACHSPEPQ
Trigger: CTGAGGCTCAGGACTGTGACAGGCCTTGGAAGGCCACTGATGAAGGTGCAGCCTCAGTTGCAATTTATGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CAA 90 bp GATGTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTCTCTTTTAGAGGCTCCTCCAAGGGCTaGGGTCACTTCTCCAGCTCT +
Preference number: 3 (lower is better)
Translates to: DVTYWLASPGLLSLLSFRGSSKG*GHFSSS
Trigger: AGAGCTGGAGAAGTGACCCAAGCCCTTGGAGGAGCC...TCTAAAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 72 bp TCCACAGTCTCCCACCCCAATCCCCCAGTGCTAGGATaGTGTGACAGATGTGTGTCAGCATGCTTAGCTTCT +
Preference number: 3 (lower is better)
Translates to: STVSHPNPPVLG*CDRCVSACLAS
Trigger: AGAAGCTAAGCATGCTGACACACATCTGTCACATCATCCTAGCACTGGGGGATTGGGGTGGGAGACTGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 72 bp TGGAAAAACAAGACAGGAGAAAGTTGGAACCCCCAGTaGACCTGCAAGAAAGCTGTGGCCAATGAGCGGTGG +
Preference number: 3 (lower is better)
Translates to: WKNKTGESWNPQ*TCKKAVANERW
Trigger: CCACCGCTCATTGGCCACAGCTTTCTTGCAGGTGCACTGGGGGTTCCAACTTTCTCCTGTCTTGTTTTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 72 bp GGTCAACCTGGTCTACAGAATGCGTTTCAGGCCAGCTaGTGCTACACAGAGAGACCCTGTCTTGAGAAAACC +
Preference number: 3 (lower is better)
Translates to: GQPGLQNAFQAS*CYTERPCLEKT
Trigger: GGTTTTCTCAAGACAGGGTCTCTCTGTGTAGCAGCAGCTGGCCTGAAACGCATTCTGTAGACCAGGTTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 72 bp TTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTaGTCTCTTTTAGAACCCAAGACTACCAGCCCAGGG +
Preference number: 3 (lower is better)
Translates to: LLTGLLPLACSA*SLLEPKTTSPG
Trigger: CCCTGGGCTGGTAGTCTTGGGTTCTAAAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp ACTCTTCTGGCCCCCATGGGTACTGCACCTATGTGGTaGTCAGGCACACATGTAGGCAAATGCTCACATACA +
Preference number: 3 (lower is better)
Translates to: TLLAPMGTAPMW*SGTHVGKCSHT
Trigger: TGTATGTGAGCATTTGCCTACATGTGTGCCTGACCACCACATAGGTGCAGTACCCATGGGGGCCAGAAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp TCTGCTGAGTCAAGGTGCCAGCCATGTTGGTCTTGGTaGAGACTTAGGAGGACGATGCAATGGAGGATCAAC +
Preference number: 3 (lower is better)
Translates to: SAESRCQPCWSW*RLRRTMQWRIN
Trigger: GTTGATCCTCCATTGCATCGTCCTCCTAAGTCTCCACCAAGACCAACATGGCTGGCACCTTGACTCAGCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp TTAGGAGCTGATACAGAGGTCATGGAGGGATGTTCCTaGCTTGCTTTCCCTGGCTTGCTCAGCCTGTTCTCT +
Preference number: 3 (lower is better)
Translates to: LGADTEVMEGCS*LAFPGLLSLFS
Trigger: AGAGAACAGGCTGAGCAAGCCAGGGAAAGCAAGCCAGGAACATCCCTCCATGACCTCTGTATCAGCTCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 72 bp TCATGGAGGGATGTTCCTGGCTTGCTTTCCCTGGCTTaGTCAGCCTGTTCTCTTATAGAACCCAAGACTACC +
Preference number: 3 (lower is better)
Translates to: SWRDVPGLLSLA*SACSLIEPKTT
Trigger: GGTAGTCTTGGGTTCTATAAGAGAACAGGCTGAGCAAGCCAGGGAAAGCAAGCCAGGAACATCCCTCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 72 bp GGAGGGATGTTACTTACTGGCTTGCTTCCCCTGGCTTaGTCAGCTTGCTCTCTTTTAGAACCCAAGACTACC +
Preference number: 3 (lower is better)
Translates to: GGMLLTGLLPLA*SACSLLEPKTT
Trigger: GGTAGTCTTGGGTTCTAAAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp CAGAAGCCCCAACTTTGTTTCCAGCACCATTTCAGGTaGCTAACAGCCACCTGTAACTCCAGCCCTGAAGAT +
Preference number: 3 (lower is better)
Translates to: QKPQLCFQHHFR*LTATCNSSPED
Trigger: ATCTTCAGGGCTGGAGTTACAGGTGGCTGTTAGCCACCTGAAATGGTGCTGGAAACAAAGTTGGGGCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp CATGGCCACTTGTCTGAATTTGATCAGTTGTGGGTCTaGATAACAGGCTCCATCTGCTGCAGGAAGAAGCCC +
Preference number: 3 (lower is better)
Translates to: HGHLSEFDQLWV*ITGSICCRKKP
Trigger: GGGCTTCTTCCTGCAGCAGATGGAGCCTGTTATCCAGACCCACAACTGATCAAATTCAGACAAGTGGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CAA 90 bp GTTATCCTCTACCTCTACACAGGGGTCATGACACAGGTGCACTGCCACACAGTCTATGATCTGTGGAGCTaGCAGTATAAACAAGCCCAG +
Preference number: 3 (lower is better)
Translates to: VILYLYTGVMTQVHCHTVYDLWS*QYKQAQ
Trigger: CTGGGCTTGTTTATACTGCAAGCTCCACAGATCATA...GACTGTGTGGCAGTGCACCTGTGTCATGACCCCTGTGTAGAGGTAGAGGATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CAA 90 bp AGGGCACAGTCACAGTCAAAAGCAGAATCAAACTCCAACCATCCAATGTCTAGAGTGACATGGTCCCATTaGGGACTGTGTGCCCCATGG +
Preference number: 3 (lower is better)
Translates to: RAQSQSKAESNSNHPMSRVTWSH*GLCAPW
Trigger: CCATGGGGCACACAGTCCCAAATGGGACCATGTCAC...TCTAGACATTGGATGGTTGGAGTTTGATTCTGCTTTTGACTGTGACTGTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CAA 90 bp GATGTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTCTCTTTTAGAGACCTGAAAGGATGTTaGATCCCCTGGAGCTGGAGT +
Preference number: 3 (lower is better)
Translates to: DVTYWLASPGLLSLLSFRDLKGC*IPWSWS
Trigger: ACTCCAGCTCCAGGGGATCAAACATCCTTTCAGGTC...TCTAAAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 72 bp GAGCGGTGGTCAGGTTATAAGACTAGCATGGATAATTaGTTCTGCCCTGGAGGCTGGAGAGATGGTTCAGTG +
Preference number: 3 (lower is better)
Translates to: ERWSGYKTSMDN*FCPGGWRDGSV
Trigger: CACTGAACCATCTCTCCAGCCTCCAGGGCAGAATCAATTATCCATGCTAGTCTTATAACCTGACCACCGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 72 bp TCTCTCAAAATAGTGCTAGAGTGCACTAGAGTCTGGTaGGCACCAGGAATCCAGACCTACAAACCTGTGGGG +
Preference number: 3 (lower is better)
Translates to: SLKIVLECTRVW*APGIQTYKPVG
Trigger: CCCCACAGGTTTGTAGGTCTGGATTCCTGGTGCTCACCAGACTCTAGTGCACTCTAGCACTATTTTGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 72 bp CAACCTGGTCTACAGAATGCGTTTCAGGCCAGCTGCTaGTACACAGAGAGACCCTGTCTTGAGAAAACCAAA +
Preference number: 3 (lower is better)
Translates to: QPGLQNAFQASC*YTERPCLEKTK
Trigger: TTTGGTTTTCTCAAGACAGGGTCTCTCTGTGTAGCAGCAGCTGGCCTGAAACGCATTCTGTAGACCAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 72 bp ACCATCCAAGTGGTTCTGGGAATGAATTTGGCAGTCTaGAAGAGCAGCCAGTGCTCTCATTCACTGAGCTGT +
Preference number: 3 (lower is better)
Translates to: TIQVVLGMNLAV*KSSQCSHSLSC
Trigger: ACAGCTCAGTGAATGAGAGCACTGGCTGCTCTTGCAGACTGCCAAATTCATTCCCAGAACCACTTGGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp TGGCCAATGAGCGGTGGTCAGGTTATAAGACTAGCATaGATAATTGATTCTGCCCTGGAGGCTGGAGAGATG +
Preference number: 3 (lower is better)
Translates to: WPMSGGQVIRLA*IIDSALEAGEM
Trigger: CATCTCTCCAGCCTCCAGGGCAGAATCAATTATCCATGCTAGTCTTATAACCTGACCACCGCTCATTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp TTTAGGACTTGGTGGAAAAACAAGACAGGAGAAAGTTaGAACCCCCAGTGCACCTGCAAGAAAGCTGTGGCC +
Preference number: 3 (lower is better)
Translates to: FRTWWKNKTGES*NPQCTCKKAVA
Trigger: GGCCACAGCTTTCTTGCAGGTGCACTGGGGGTTCCAACTTTCTCCTGTCTTGTTTTTCCACCAAGTCCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp TCTGGTGAGCACCAGGAATCCAGACCTACAAACCTGTaGGGAACACTGCACATTCAAACGGCAACAGAATCT +
Preference number: 3 (lower is better)
Translates to: SGEHQESRPTNL*GTLHIQTATES
Trigger: AGATTCTGTTGCCGTTTGAATGTGCAGTGTTCCCCACAGGTTTGTAGGTCTGGATTCCTGGTGCTCACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp ACTCCACTGCTGCTGCTTTTCTTGGTGGTCATCTCATaGTACTGGCATCTCCAAAACACTGCTGTCTTCTGC +
Preference number: 3 (lower is better)
Translates to: TPLLLLFLVVIS*YWHLQNTAVFC
Trigger: GCAGAAGACAGCAGTGTTTTGGAGATGCCAGTACCATGAGATGACCACCAAGAAAAGCAGCAGCAGTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 72 bp TACCTGTACCCAAAGCTCCAAAGGACCTGTGCCATCTaGGGCATCTGTGGATATAACCCACACACACACAAA +
Preference number: 3 (lower is better)
Translates to: YLYPKLQRTCAI*GICGYNPHTHK
Trigger: TTTGTGTGTGTGTGGGTTATATCCACAGATGCCTCAGATGGCACAGGTCCTTTGGAGCTTTGGGTACAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 72 bp ATTGACACACAAAACCAGCCAGTTCATGTGGGTGTTTaGGGAGACCTGAAAGGATGTTTGATCCCCTGGAGC +
Preference number: 3 (lower is better)
Translates to: IDTQNQPVHVGV*GDLKGCLIPWS
Trigger: GCTCCAGGGGATCAAACATCCTTTCAGGTCTCCTCAAACACCCACATGAACTGGCTGGTTTTGTGTGTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 72 bp GCTTCACTAATAGTCTCTCATAGGCTCTCTTCATGGTaGCAAGCCTCAACTCCTTTGCATGACCCCTTCAGT +
Preference number: 3 (lower is better)
Translates to: ASLIVSHRLSSW*QASTPLHDPFS
Trigger: ACTGAAGGGGTCATGCAAAGGAGTTGAGGCTTGGCACCATGAAGAGAGCCTATGAGAGACTATTAGTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp GTGCGGGGCTTGCTGTCAAGCCTGATGATCTCACTTTaGAGGAGAGATTCAATACCACAAGTTATCCTCTAC +
Preference number: 3 (lower is better)
Translates to: VRGLLSSLMISL*RRDSIPQVILY
Trigger: GTAGAGGATAACTTGTGGTATTGAATCTCTCCTCCAAAGTGAGATCATCAGGCTTGACAGCAAGCCCCGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp TGTTGGTCTTGGTGGAGACTTAGGAGGACGATGCAATaGAGGATCAACTTAGGCTCAGAGTTGCAGAGCTAT +
Preference number: 3 (lower is better)
Translates to: CWSWWRLRRTMQ*RINLGSELQSY
Trigger: ATAGCTCTGCAACTCTGAGCCTAAGTTGATCCTCCATTGCATCGTCCTCCTAAGTCTCCACCAAGACCAACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CAA 90 bp AGGGCACAGTCACAGTCAAAAGCAGAATCAAACTCCAACCATCCAATGTCTAGAGATGAGGGATGTGGGTaGCTGCTGAATGAAGTGAGG +
Preference number: 3 (lower is better)
Translates to: RAQSQSKAESNSNHPMSRDEGCG*LLNEVR
Trigger: CCTCACTTCATTCAGCAGCAACCCACATCCCTCATC...TCTAGACATTGGATGGTTGGAGTTTGATTCTGCTTTTGACTGTGACTGTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CAA 90 bp ACATCCTGTAGAGCTCTTAACGTCCCAATGGGTCATCTAGCTCAAAGTTCCAAAGTGCCCCATGGCCACTaGTCTGAATTTGATCAGTTG +
Preference number: 3 (lower is better)
Translates to: TSCRALNVPMGHLAQSSKVPHGH*SEFDQL
Trigger: CAACTGATCAAATTCAGACAAGTGGCCATGGGGCAC...TTTGGAACTTTGAGCTAGATGACCCATTGGGACGTTAAGAGCTCTACAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 72 bp CCTTACAGCTGGATCTCATGGAGGCATTCCCTCACCTaGAGCTCCTTTGTTTGTGATAACTCCAGTTTGTGT +
Preference number: 3 (lower is better)
Translates to: PYSWISWRHSLT*SSFVCDNSSLC
Trigger: ACACAAACTGGAGTTATCACAAACAAAGGAGCTTCAGGTGAGGGAATGCCTCCATGAGATCCAGCTGTAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 72 bp GGTGGTCATCTCATGGTACTGGCATCTCCAAAACACTaGTGTCTTCTGCAACTAGGCTTCACTAATAGTCTC +
Preference number: 3 (lower is better)
Translates to: GGHLMVLASPKH*CLLQLGFTNSL
Trigger: GAGACTATTAGTGAAGCCTAGTTGCAGAAGACAGCAGTGTTTTGGAGATGCCAGTACCATGAGATGACCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp TGTAAACAGAATGTCTTGATGCAAGCCAGGTGGTGGTaGCACATACTTTTAATCCCAGCACTTGAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: CKQNVLMQARWW*HILLIPALERQ
Trigger: CTGCCTCTCAAGTGCTGGGATTAAAAGTATGTGCCACCACCACCTGGCTTGCATCAAGACATTCTGTTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp CTGTGTAAACAGAATGTCTTGATGCAAGCCAGGTGGTaGTGGCACATACTTTTAATCCCAGCACTTGAGAGG +
Preference number: 3 (lower is better)
Translates to: LCKQNVLMQARW*WHILLIPALER
Trigger: CCTCTCAAGTGCTGGGATTAAAAGTATGTGCCACCACCACCTGGCTTGCATCAAGACATTCTGTTTACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp AGTGTCTCTGGGGTATTATACAGCACAGCACCCATGTaGAGGTCACAGGACAAGTATGTGAATAGCTTCACT +
Preference number: 3 (lower is better)
Translates to: SVSGVLYSTAPM*RSQDKYVNSFT
Trigger: AGTGAAGCTATTCACATACTTGTCCTGTGACCTCCACATGGGTGCTGTGCTGTATAATACCCCAGAGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CAA 90 bp GGTAGTTCACAACCATCTATAATGGAGTCTGTGGCCCTTTCCTGGTGTGAAGGCACACAAGTACTAACTTaGTTCATCCTGCTTAGCTTC +
Preference number: 3 (lower is better)
Translates to: GSSQPSIMESVALSWCEGTQVLT*FILLSF
Trigger: GAAGCTAAGCAGGATGAACAAAGTTAGTACTTGTGT...GCCTTCACACCAGGAAAGGGCCACAGACTCCATTATAGATGGTTGTGAACTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 72 bp CAGGACAAGTATGTGAATAGCTTCACTTCTATCGTGTaGGTTCTGAGGATCCAACCTAGACAGTCAGGCTTG +
Preference number: 3 (lower is better)
Translates to: QDKYVNSFTSIV*VLRIQPRQSGL
Trigger: CAAGCCTGACTGTCTAGGTTGGATCCTCAGAACTCACACGATAGAAGTGAAGCTATTCACATACTTGTCCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 72 bp CCTTACAGCTGGATCTCATGGAGGCATTCCCTCACCTaGAGCTCCTTTGTTTGTGATAACTCCAGTTTGTAT +
Preference number: 3 (lower is better)
Translates to: PYSWISWRHSLT*SSFVCDNSSLY
Trigger: ATACAAACTGGAGTTATCACAAACAAAGGAGCTTCAGGTGAGGGAATGCCTCCATGAGATCCAGCTGTAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 72 bp GACTCTTTCAGGCCTTCAAAACCAGTACCACCTGGGTaGCTTACAAATTATCAAGTCCTGCTTCAGCACAAG +
Preference number: 3 (lower is better)
Translates to: DSFRPSKPVPPG*LTNYQVLLQHK
Trigger: CTTGTGCTGAAGCAGGACTTGATAATTTGTAAGTCACCCAGGTGGTACTGGTTTTGAAGGCCTGAAAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 72 bp GGAAGCAATCCCACTAAATCAGGGACTAGACAAGGCTaGCCACTTTCTCCCTACCTTTTCAACATAGTACTT +
Preference number: 3 (lower is better)
Translates to: GSNPTKSGTRQG*PLSPYLFNIVL
Trigger: AAGTACTATGTTGAAAAGGTAGGGAGAAAGTGGGCAGCCTTGTCTAGTCCCTGATTTAGTGGGATTGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 72 bp CAGTACCACCTGGGTGACTTACAAATTATCAAGTCCTaGTTCAGCACAAGGTATAACCTTGGCTATCTCTGG +
Preference number: 3 (lower is better)
Translates to: QYHLGDLQIIKS*FSTRYNLGYLW
Trigger: CCAGAGATAGCCAAGGTTATACCTTGTGCTGAAGCAGGACTTGATAATTTGTAAGTCACCCAGGTGGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 72 bp AGCAGTAAAGAACACTGGCTGCTCTTCCAGAGGTACTaGGTTCAATTCCTAGAAACCACATGTAGCCAACAT +
Preference number: 3 (lower is better)
Translates to: SSKEHWLLFQRY*VQFLETTCSQH
Trigger: ATGTTGGCTACATGTGGTTTCTAGGAATTGAACTCAGTACCTCTGGAAGAGCAGCCAGTGTTCTTTACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp GTACTAACTTTGTTCATCCTGCTTAGCTTCCAAGACTaGACAAGATTTGGTGTGTCCAGGATAGTACAGCCA +
Preference number: 3 (lower is better)
Translates to: VLTLFILLSFQD*TRFGVSRIVQP
Trigger: TGGCTGTACTATCCTGGACACACCAAATCTTGTCCAGTCTTGGAAGCTAAGCAGGATGAACAAAGTTAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 72 bp GCAGAAATGATGAATTCTTTACCTAGACTGAAGGAGTaGCTCCATCACTGTGGAAGTGTGGTCGTTATAAGG +
Preference number: 3 (lower is better)
Translates to: AEMMNSLPRLKE*LHHCGSVVVIR
Trigger: CCTTATAACGACCACACTTCCACAGTGATGGAGTCACTCCTTCAGTCTAGGTAAAGAATTCATCATTTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 72 bp GGGAGGAAAGGTTTTATTCAGTTTACATTTCCACTCTaGTGTTCATCACCAAAGGAAGTCAGGACTGGAACT +
Preference number: 3 (lower is better)
Translates to: GRKGFIQFTFPL*CSSPKEVRTGT
Trigger: AGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAGAGTGGAAATGTAAACTGAATAAAACCTTTCCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp TCACAACCATCTATAATGGAGTCTGTGGCCCTTTCCTaGTGTGAAGGCATATATTCAGTTAGAGCACTCATA +
Preference number: 3 (lower is better)
Translates to: SQPSIMESVALS*CEGIYSVRALI
Trigger: TATGAGTGCTCTAACTGAATATATGCCTTCACACCAGGAAAGGGCCACAGACTCCATTATAGATGGTTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp TTGGTTTACAGTTTGAAATATACAGTCCACACATCATaGAAGGCATGGAGGAGTGTCTTGTTCTGGGTGGTA +
Preference number: 3 (lower is better)
Translates to: LVYSLKYTVHTS*KAWRSVLFWVV
Trigger: TACCACCCAGAACAAGACACTCCTCCATGCCTTCCATGATGTGTGGACTGTATATTTCAAACTGTAAACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp AAACATGGTCAGGTTGTCACAAGAATACCCCACTTCTaGTACCAATTTGTCTTAGGGTTTCTATTCCTGCAC +
Preference number: 3 (lower is better)
Translates to: KHGQVVTRIPHF*YQFVLGFLFLH
Trigger: GTGCAGGAATAGAAACCCTAAGACAAATTGGTACCAGAAGTGGGGTATTCTTGTGACAACCTGACCATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CAA 90 bp GATTCAATACCACAAGTTATCCTCTACCTCTACACAGGGGTCATGACACAGGTGGTAAAAATGGCTATCTaGCCAAAAGCAATCTACAGA +
Preference number: 3 (lower is better)
Translates to: DSIPQVILYLYTGVMTQVVKMAI*PKAIYR
Trigger: TCTGTAGATTGCTTTTGGCAAGATAGCCATTTTTAC...CACCTGTGTCATGACCCCTGTGTAGAGGTAGAGGATAACTTGTGGTATTGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CAA 90 bp GGGTTTATTCAGTTTACACTTCCATATTGCTGTTCATCAACAAAGGAAATCAGGCTTGCTTTCCCTGGCTaGCTCAGCCTGTTCTCTTAT +
Preference number: 3 (lower is better)
Translates to: GFIQFTLPYCCSSTKEIRLAFPG*LSLFSY
Trigger: ATAAGAGAACAGGCTGAGCAAGCCAGGGAAAGCAAG...CCTGATTTCCTTTGTTGATGAACAGCAATATGGAAGTGTAAACTGAATAAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 72 bp CTGCCCACTTTCTCCCTACCTTTTCAACATAGTACTTaGAGTATTAGCCAGAGCAATTCGACAACAAAAGGA +
Preference number: 3 (lower is better)
Translates to: LPTFSLPFQHST*SISQSNSTTKG
Trigger: TCCTTTTGTTGTCGAATTGCTCTGGCTAATACTTCAAGTACTATGTTGAAAAGGTAGGGAGAAAGTGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CAA 90 bp GGGTTTATTCAGTTTACACTTCCATATTGCTGTTCATCAACAAAGGAAATCAGGCCAGTTTGTGTCAAGTaGACACACAAAACCAGCCAG +
Preference number: 3 (lower is better)
Translates to: GFIQFTLPYCCSSTKEIRPVCVK*THKTSQ
Trigger: CTGGCTGGTTTTGTGTGTCAACTTGACACAAACTGG...CCTGATTTCCTTTGTTGATGAACAGCAATATGGAAGTGTAAACTGAATAAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CAA 90 bp TTCTCCATGTTACTTATCCAATCCTTGACCTTCATAACTTTCATCTGTTCTTTGTGTAAACAGAATGTCTaGATGCAAGCCAGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: FSMLLIQSLTFITFICSLCKQNV*MQARWW
Trigger: CCACCACCTGGCTTGCATCAAGACATTCTGTTTACA...CAAAGAACAGATGAAAGTTATGAAGGTCAAGGATTGGATAAGTAACATGGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 72 bp ACAAAACCAGCCAGTTCAATTGACCCCTTGTCAACTTaGCACATAAACACATCACTATTAAGCCTCAATCCT +
Preference number: 3 (lower is better)
Translates to: TKPASSIDPLST*HINTSLLSLNP
Trigger: AGGATTGAGGCTTAATAGTGATGTGTTTATGTGTCAAGTTGACAAGGGGTCAATTGAACTGGCTGGTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CCA 72 bp ATTGATTCTGCCCTGGAGGCTGGAGAGATGGTTCAGTaGTTAAATAAAGAACATTTACTGTTCTTAAAGAGG +
Preference number: 3 (lower is better)
Translates to: IDSALEAGEMVQ*LNKEHLLFLKR
Trigger: CCTCTTTAAGAACAGTAAATGTTCTTTATTTAACCACTGAACCATCTCTCCAGCCTCCAGGGCAGAATCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CAA 90 bp TTCTCCATGTTACTTATCCAATCCTTGACCTTCATAACTTTCATCTGTTCTTTGACATTTACCAAGAGCTaGCAAATGCCCCTTAGCCAT +
Preference number: 3 (lower is better)
Translates to: FSMLLIQSLTFITFICSLTFTKS*QMPLSH
Trigger: ATGGCTAAGGGGCATTTGCAAGCTCTTGGTAAATGT...CAAAGAACAGATGAAAGTTATGAAGGTCAAGGATTGGATAAGTAACATGGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR TCA 72 bp GATACAGGCACTGAGATGGGATGTTGGGATGCTATCTaGATATATACATATAAGGATGTAAGCTTGATGTCA +
Preference number: 3 (lower is better)
Translates to: DTGTEMGCWDAI*IYTYKDVSLMS
Trigger: TGACATCAAGCTTACATCCTTATATGTATATATTCAGATAGCATCCCAACATCCCATCTCAGTGCCTGTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 72 bp TGCACACAGTCAAACACACACACTCACACACAAACATaGACACTCTTTTCTAGAATATATACTCTCAAATAC +
Preference number: 3 (lower is better)
Translates to: CTQSNTHTHTQT*TLFSRIYTLKY
Trigger: GTATTTGAGAGTATATATTCTAGAAAAGAGTGTGCATGTTTGTGTGTGAGTGTGTGTGTTTGACTGTGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR-3UTR CAA 90 bp TTCTCCATGTTACTTATCCAATCCTTGACCTTCATAACTTTCATCTGTTCTTTGACTGTGTCCTTGACCTaGTTCTTTGAATGTGTTAAT +
Preference number: 3 (lower is better)
Translates to: FSMLLIQSLTFITFICSLTVSLT*FFECVN
Trigger: ATTAACACATTCAAAGAACAAGGTCAAGGACACAGT...CAAAGAACAGATGAAAGTTATGAAGGTCAAGGATTGGATAAGTAACATGGAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR GCA 72 bp ATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATaGTCATGGATTGGCAGGATAAACATTGTAAAAATG +
Preference number: 3 (lower is better)
Translates to: IKEDLRRWKDLP*SWIGRINIVKM
Trigger: CATTTTTACAATGTTTATCCTGCCAATCCATGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR TCA 90 bp GTTATCCTCTACCTCTACACAGGGGTCATGACACAGGTGCACTGCCACACAGTCAGGCCCAGGATGCAGTaGCCAGGAAGCCACACAGCC +
Preference number: 4 (lower is better)
Translates to: VILYLYTGVMTQVHCHTVRPRMQ*PGSHTA
Trigger: GGCTGTGTGGCTTCCTGGTCACTGCATCCTGGGCCT...GACTGTGTGGCAGTGCACCTGTGTCATGACCCCTGTGTAGAGGTAGAGGATAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR CCA 90 bp GTTATCCTCTACCTCTACACAGGGGTCATGACACAGGTGCACTGCCACACAGTCTGGGGGTGTGCAGCCTaGGATCAGCAGCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: VILYLYTGVMTQVHCHTVWGCAA*DQQQWP
Trigger: TGGCCATTGCTGCTGATCCCAGGCTGCACACCCCCA...GACTGTGTGGCAGTGCACCTGTGTCATGACCCCTGTGTAGAGGTAGAGGATAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR CCA 90 bp CTAGACAGTCAGGCTTGGTGCCTGCCGGGGCTTTATCTGCTGAGTCAAGGTGCCTTGTGTCCTGACACATaGTTGGCCAGCATCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LDSQAWCLPGLYLLSQGALCPDT*LASILG
Trigger: CCCCAAGATGCTGGCCAACCATGTGTCAGGACACAA...GGCACCTTGACTCAGCAGATAAAGCCCCGGCAGGCACCAAGCCTGACTGTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR GCA 90 bp CTAGACAGTCAGGCTTGGTGCCTGCCGGGGCTTTATCTGCTGAGTCAAGGTGCCCACAGTGTACATCACTaGAGCTGCTGTGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LDSQAWCLPGLYLLSQGAHSVHH*SCCVLL
Trigger: CAGAAGGACACAGCAGCTGCAGTGATGTACACTGTG...GGCACCTTGACTCAGCAGATAAAGCCCCGGCAGGCACCAAGCCTGACTGTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR GCA 90 bp GGCCAGGAAGCAGGAGCTGATGCAGAGACCATGGAGGGATGTTACTTACTGGCTGGTGATGATGGGCAATaGGCCCACAGTGTATACCAT +
Preference number: 4 (lower is better)
Translates to: GQEAGADAETMEGCYLLAGDDGQ*AHSVYH
Trigger: ATGGTATACACTGTGGGCGCATTGCCCATCATCACC...AGCCAGTAAGTAACATCCCTCCATGGTCTCTGCATCAGCTCCTGCTTCCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp GTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTaGCTCTCTTTTAGAACCCAAGACTACCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VTYWLASPGLLS*LSFRTQDYQPR
Trigger: CCTGGGCTGGTAGTCTTGGGTTCTAAAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR CCA 90 bp GAGGAGGAGCCCCACCCACTCTTTGGTTTACAGTTTGAAATATACAGTCCACACGCAGCTGCTGCTGTCTaGGGTCCTGTGACAAGCCTA +
Preference number: 4 (lower is better)
Translates to: EEEPHPLFGLQFEIYSPHAAAAV*GPVTSL
Trigger: TAGGCTTGTCACAGGACCCCAGACAGCAGCAGCTGC...GTGTGGACTGTATATTTCAAACTGTAAACCAAAGAGTGGGTGGGGCTCCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp GAGCTGATACAGAGGTCATGGAGGGATGTTCCTGGCTaGCTTTCCCTGGCTTGCTCAGCCTGTTCTCTTATA +
Preference number: 4 (lower is better)
Translates to: ELIQRSWRDVPG*LSLACSACSLI
Trigger: TATAAGAGAACAGGCTGAGCAAGCCAGGGAAAGCAAGCCAGGAACATCCCTCCATGACCTCTGTATCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp GCTCTAGCTGCCTGTACTCCACTGCTGCTGCTTTTCTaGGTGGTCATCTCATGGTACTGGCATCTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: ALAACTPLLLLF*VVISWYWHLQN
Trigger: GTTTTGGAGATGCCAGTACCATGAGATGACCACCAAGAAAAGCAGCAGCAGTGGAGTACAGGCAGCTAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp GAATCCACTCAATATCTTCTAGGCTCCTCCAAGGGCTaGGGTCACTTCTCCAGCTCTGCCCTTTGTAGCACA +
Preference number: 4 (lower is better)
Translates to: ESTQYLLGSSKG*GHFSSSALCST
Trigger: TGTGCTACAAAGGGCAGAGCTGGAGAAGTGACCCAAGCCCTTGGAGGAGCCTAGAAGATATTGAGTGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp GGCATGGAGGAGTGTCTTGTTCTGGGTGGTATGAGCTaGCGGCTGCTACTTATTACATGTAGGCAGATTAGG +
Preference number: 4 (lower is better)
Translates to: GMEECLVLGGMS*RLLLITCRQIR
Trigger: CCTAATCTGCCTACATGTAATAAGTAGCAGCCGCAAGCTCATACCACCCAGAACAAGACACTCCTCCATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR TCA 90 bp GATTCAATACCACAAGTTATCCTCTACCTCTACACAGGGGTCATGACACAGGTGGGATGGTGGTGGAGGTaGAGCAGACATCTACAAAGG +
Preference number: 4 (lower is better)
Translates to: DSIPQVILYLYTGVMTQVGWWWR*SRHLQR
Trigger: CCTTTGTAGATGTCTGCTTCACCTCCACCACCATCC...CACCTGTGTCATGACCCCTGTGTAGAGGTAGAGGATAACTTGTGGTATTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR TCA 90 bp GATGTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTCTCTTTTAGAGATTCCTTTGTGTCCTaGCACATGGTTGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: DVTYWLASPGLLSLLSFRDSFVS*HMVGQH
Trigger: ATGCTGGCCAACCATGTGTCAGGACACAAAGGAATC...TCTAAAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR GCA 90 bp GAGGAGGAGCCCCACCCACTCTTTGGTTTACAGTTTGAAATATACAGTCCACACGCCACAGGTGGAGAATaGTTTCCATTTCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: EEEPHPLFGLQFEIYSPHATGGE*FPFPSC
Trigger: ACAGGAGGGAAATGGAAAGCATTCTCCACCTGTGGC...GTGTGGACTGTATATTTCAAACTGTAAACCAAAGAGTGGGTGGGGCTCCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR CCA 90 bp AGGGCACAGTCACAGTCAAAAGCAGAATCAAACTCCAACCATCCAATGTCTAGATCCTTCTGGGCTGTGTaGGAGGATGTGGGACTGAAG +
Preference number: 4 (lower is better)
Translates to: RAQSQSKAESNSNHPMSRSFWAV*EDVGLK
Trigger: CTTCAGTCCCACATCCTCCCACACAGCCCAGAAGGA...TCTAGACATTGGATGGTTGGAGTTTGATTCTGCTTTTGACTGTGACTGTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp GGTGCGGGGCTTGCTGTCAAGCCTGATGATCTCACTTaGGAGGAGAGATTCAATACCACAAGTTATCCTCTA +
Preference number: 4 (lower is better)
Translates to: GAGLAVKPDDLT*EERFNTTSYPL
Trigger: TAGAGGATAACTTGTGGTATTGAATCTCTCCTCCAAAGTGAGATCATCAGGCTTGACAGCAAGCCCCGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp ACTAGACATGGTGGTACACACATGCAATCTCAGCTTTaGGAAAGCCTAGATGAGGGATGTGGGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TRHGGTHMQSQL*ESLDEGCGLLL
Trigger: CAGCAGCAACCCACATCCCTCATCTAGGCTTTCCAAAAGCTGAGATTGCATGTGTGTACCACCATGTCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR CCA 90 bp CCACATGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAAAGAAGTGGGGGACCTaGTTGTGGCCACAGAACAAG +
Preference number: 4 (lower is better)
Translates to: PHVANIKVNGEKLEAIPLKKWGT*LWPQNK
Trigger: CTTGTTCTGTGGCCACAACCAGGTCCCCCACTTCTT...TAGTGGGATTGCTTCCAGCTTCTCTCCATTTACTTTGATGTTGGCTACATGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR CCA 90 bp TGCTCATGGATTGGCAGGATAAACATTGTAAAAATGGCTATCTTGCCAAAAGCAGCTGCTGTGTCCTTCTaGGCTGTGTGGGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: CSWIGRINIVKMAILPKAAAVSF*AVWEDV
Trigger: CACATCCTCCCACACAGCCCAGAAGGACACAGCAGC...TGCTTTTGGCAAGATAGCCATTTTTACAATGTTTATCCTGCCAATCCATGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp GTTACAAGCACTTCCACTTTTTCAGAAGCCCCAACTTaGTTTCCAGCACCATTTCAGGTGGCTAACAGCCAC +
Preference number: 4 (lower is better)
Translates to: VTSTSTFSEAPT*FPAPFQVANSH
Trigger: GTGGCTGTTAGCCACCTGAAATGGTGCTGGAAACAAAGTTGGGGCTTCTGAAAAAGTGGAAGTGCTTGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp ATGAGGAGGAGCCCCACCCACTCTTTGGTTTACAGTTaGAAATATACAGTCCACACATCATGGAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: MRRSPTHSLVYS*KYTVHTSWKAW
Trigger: CCATGCCTTCCATGATGTGTGGACTGTATATTTCAAACTGTAAACCAAAGAGTGGGTGGGGCTCCTCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR GCA 90 bp ATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAAATTGGAAAGAAAAGAGCAGCTGCTaGTGTCTGGGGTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: ISQSNSTTKGDQGDTNWKEKSSC*CLGSCD
Trigger: GTCACAGGACCCCAGACAGCAGCAGCTGCTCTTTTC...TTTCCAATTTGTATCCCCTTGATCTCCTTTTGTTGTCGAATTGCTCTGGCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR GCA 90 bp TGCTCATGGATTGGCAGGATAAACATTGTAAAAATGGCTATCTTGCCAAAAGCAGCAGAAAAGAGCAGCTaGTGCTGTCTGGGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: CSWIGRINIVKMAILPKAAEKSS*CCLGSC
Trigger: ACAGGACCCCAGACAGCAGCAGCTGCTCTTTTCTGC...TGCTTTTGGCAAGATAGCCATTTTTACAATGTTTATCCTGCCAATCCATGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR CCA 90 bp TGCTCATGGATTGGCAGGATAAACATTGTAAAAATGGCTATCTTGCCAAAAGCAGTCCTGACACATGGTTaGCCAGCATCTTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: CSWIGRINIVKMAILPKAVLTHG*PASWGW
Trigger: CCATCCCCAAGATGCTGGCCAACCATGTGTCAGGAC...TGCTTTTGGCAAGATAGCCATTTTTACAATGTTTATCCTGCCAATCCATGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp CCACCATTGCCGAGCAAGCCAATGACATTTCTATGCTaGAAAGTTGTTTGTCTGCCTGAGAACTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PPLPSKPMTFLC*KVVCLPENCVC
Trigger: ACACACACAGTTCTCAGGCAGACAAACAACTTTCAAGCATAGAAATGTCATTGGCTTGCTCGGCAATGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp ATGATCACTTGGCTCTACCTGTGTAAACAGAATGTCTaGATGCAAGCCAGGTGGTGGTGGCACATACTTTTA +
Preference number: 4 (lower is better)
Translates to: MITWLYLCKQNV*MQARWWWHILL
Trigger: TAAAAGTATGTGCCACCACCACCTGGCTTGCATCAAGACATTCTGTTTACACAGGTAGAGCCAAGTGATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR TCA 90 bp TTCTCCATGTTACTTATCCAATCCTTGACCTTCATAACTTTCATCTGTTCTTTGGGTTCCCTAGGCCTGTaGGAAGGTACATGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: FSMLLIQSLTFITFICSLGSLGL*EGTCSG
Trigger: TCCTGAGCATGTACCTTCTCACAGGCCTAGGGAACC...CAAAGAACAGATGAAAGTTATGAAGGTCAAGGATTGGATAAGTAACATGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR GCA 90 bp GGGTTTATTCAGTTTACACTTCCATATTGCTGTTCATCAACAAAGGAAATCAGGGTACATCACTGCAGCTaGTGTGTCCTTCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GFIQFTLPYCCSSTKEIRVHHCS*CVLLGC
Trigger: ACAGCCCAGAAGGACACAGCAGCTGCAGTGATGTAC...CCTGATTTCCTTTGTTGATGAACAGCAATATGGAAGTGTAAACTGAATAAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp GGATCTCATGGAGGCATTCCCTCACCTGAAGCTCCTTaGTTTGTGATAACTCCAGTTTGTATCAAATTGACA +
Preference number: 4 (lower is better)
Translates to: GSHGGIPSPEAP*FVITPVCIKLT
Trigger: TGTCAATTTGATACAAACTGGAGTTATCACAAACAAAGGAGCTTCAGGTGAGGGAATGCCTCCATGAGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR CCA 90 bp GGGTTTATTCAGTTTACACTTCCATATTGCTGTTCATCAACAAAGGAAATCAGGGTCAGAAGGACTGTGTaGGTCAGGGCATTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: GFIQFTLPYCCSSTKEIRVRRTV*VRAFAK
Trigger: CTTTGCAAATGCCCTGACCCACACAGTCCTTCTGAC...CCTGATTTCCTTTGTTGATGAACAGCAATATGGAAGTGTAAACTGAATAAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp GCATGCTTAGCTTCTAACTGTGTTACCATATTGGTTTaGCCCATCTCAGGATATCAGGAGATGATAGAATGC +
Preference number: 4 (lower is better)
Translates to: ACLASNCVTILV*PISGYQEMIEC
Trigger: GCATTCTATCATCTCCTGATATCCTGAGATGGGCAAAACCAATATGGTAACACAGTTAGAAGCTAAGCATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp GTGTCAGCATGCTTAGCTTCTAACTGTGTTACCATATaGGTTTTGCCCATCTCAGGATATCAGGAGATGATA +
Preference number: 4 (lower is better)
Translates to: VSACLASNCVTI*VLPISGYQEMI
Trigger: TATCATCTCCTGATATCCTGAGATGGGCAAAACCAATATGGTAACACAGTTAGAAGCTAAGCATGCTGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp GCTCCTTTGTTTGTGATAACTCCAGTTTGTATCAAATaGACACACAAAACCAGCCAGTTCATGTGGGTGTTT +
Preference number: 4 (lower is better)
Translates to: APLFVITPVCIK*THKTSQFMWVF
Trigger: AAACACCCACATGAACTGGCTGGTTTTGTGTGTCAATTTGATACAAACTGGAGTTATCACAAACAAAGGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp GTAATGCAAAGGTTTTGCTTTAGTAGTTCTGGTATGTaGTTAATCACAGCTGATTCTTCAGCCCCAGCTAAC +
Preference number: 4 (lower is better)
Translates to: VMQRFCFSSSGM*LITADSSAPAN
Trigger: GTTAGCTGGGGCTGAAGAATCAGCTGTGATTAACAACATACCAGAACTACTAAAGCAAAACCTTTGCATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp TCACTGAGCTGTTTCTCCATGTTACTTATCCAATCCTaGACCTTCATAACTTTCATCTGTTCTTTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: SLSCFSMLLIQS*TFITFICSLLL
Trigger: TAGCAACAAAGAACAGATGAAAGTTATGAAGGTCAAGGATTGGATAAGTAACATGGAGAAACAGCTCAGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp TATTCCTGCACAAAACATCATGACCAAGAAGCAAGTTaGGGAGGAAAGGTTTTATTCAGTTTACATTTCCAC +
Preference number: 4 (lower is better)
Translates to: YSCTKHHDQEAS*GGKVLFSLHFH
Trigger: GTGGAAATGTAAACTGAATAAAACCTTTCCTCCCAAACTTGCTTCTTGGTCATGATGTTTTGTGCAGGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp CTATCATCAATGTGTGCTAGAGTCTTAACTGTGTCCTaGACCTTGTTCTTTGAATGTGTTAATTACTTTTCT +
Preference number: 4 (lower is better)
Translates to: LSSMCARVLTVS*TLFFECVNYFS
Trigger: AGAAAAGTAATTAACACATTCAAAGAACAAGGTCAAGGACACAGTTAAGACTCTAGCACACATTGATGATAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
3UTR CAA 72 bp AGTAAACACTTCCCAGAAGATTTCACCTTGATGATATaGGTCTCTTCTTATTCACCACTAATTTCTTACTTC +
Preference number: 4 (lower is better)
Translates to: SKHFPEDFTLMI*VSSYSPLISYF
Trigger: GAAGTAAGAAATTAGTGGTGAATAAGAAGAGACCAATATCATCAAGGTGAAATCTTCTGGGAAGTGTTTACT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS GCA 90 bp AGGCCTGTGAGAAGGTACATGCTCAGGAAGGCAGAAAAGAGCAGCTaGTGCTGTCTGGGGTCCTGTGACAAGCCTAGCAGCAAGAACTCG +
Preference number: 5 (lower is better)
Translates to: RPVRRYMLRKAEKSS*CCLGSCDKPSSKNS
Trigger: CGAGTTCTTGCTGCTAGGCTTGTCACAGGACCCCAGACAGCAGCAGCTGCTCTTTTCTGCCTTCCTGAGCATGTACCTTCTCACAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209675.2
ENSMUST00000210435.4
CDS-3UTR CAA 90 bp AGGGCACAGTCACAGTCAAAAGCAGAATCAAACTCCAACCATCCAATGTCTAGATGTGGGTCAGGGCATTaGCAAAGGCTGAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: RAQSQSKAESNSNHPMSRCGSGH*QRLRPR
Trigger: CCTGGGCCTCAGCCTTTGCAAATGCCCTGACCCACA...TCTAGACATTGGATGGTTGGAGTTTGATTCTGCTTTTGACTGTGACTGTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR CAA 90 bp TCAATTATCCATTCTAGTCTTATGATCTGTGGAGCTTGCAGTATAAACAAGCCCTGTCCTGACACATGGTaGGCCAGCATCTTGGGGATG +
Preference number: 5 (lower is better)
Translates to: SIIHSSLMICGACSINKPCPDTW*ASILGM
Trigger: CATCCCCAAGATGCTGGCCAACCATGTGTCAGGACA...GGGCTTGTTTATACTGCAAGCTCCACAGATCATAAGACTAGAATGGATAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS-3UTR CAA 90 bp ATTCAAAGTCTCTTAACTGTAGGCTCCACTAAAATACTTCCTTCAAGAGGGAACTATACCATGATGTCATaGAGAGAGGTATCTGAACAG +
Preference number: 5 (lower is better)
Translates to: IQSLLTVGSTKILPSRGNYTMMS*REVSEQ
Trigger: CTGTTCAGATACCTCTCTCAATGACATCATGGTATA...GTTCCCTCTTGAAGGAAGTATTTTAGTGGAGCCTACAGTTAAGAGACTTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210435.4
CDS CCA 72 bp TGGCCACAGAACAAGAGGCGAGTCAGAAGGACTGTGTaGGTCAGGGCATTTGCAAAGGCTGAGGCCCAGGAT +
Preference number: 6 (lower is better)
Translates to: WPQNKRRVRRTV*VRAFAKAEAQD
Trigger: ATCCTGGGCCTCAGCCTTTGCAAATGCCCTGACCCACACAGTCCTTCTGACTCGCCTCTTGTTCTGTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209675.2
ENSMUST00000210435.4
CDS GCA 72 bp GGTCAAGATGCCCACAAAGGGGGTGATGATGGGCAATaGGCCCACAGTGTATACCATGATGTCATTGAGAGA +
Preference number: 6 (lower is better)
Translates to: GQDAHKGGDDGQ*AHSVYHDVIER
Trigger: TCTCTCAATGACATCATGGTATACACTGTGGGCGCATTGCCCATCATCACCCCCTTTGTGGGCATCTTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000209675.2
ENSMUST00000210435.4