Pregenerated sensors for OLFR372 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069998Ensembl transcript IDs: ENSMUST00000093434.5, ENSMUST00000215324.2
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GCATCCTGGAGGAGGCAGCTGGCCAGTTGCCTCAAACCCTGCATGTaGCCAGCCATAAAGGAGGCTCCTAGGGAAAACCAGGATCGAAGG | + |
Preference number: 1 (lower is better) Translates to: ASWRRQLASCLKPCM*PAIKEAPRENQDRR Trigger: CCTTCGATCCTGGTTTTCCCTAGGAGCCTCCTTTATGGCTGGGCACATGCAGGGTTTGAGGCAACTGGCCAGCTGCCTCCTCCAGGATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR GCA 90 bp | AGAGTTGCATCCTGGAGGAGGCAGCTGGCCAGTTGCCTCAAACCCTaGATGTGCCCAGCCATAAAGGAGGCTCCTAGGGAAAACCAGGAT | + |
Preference number: 1 (lower is better) Translates to: RVASWRRQLASCLKP*MCPAIKEAPRENQD Trigger: ATCCTGGTTTTCCCTAGGAGCCTCCTTTATGGCTGGGCACATGCAGGGTTTGAGGCAACTGGCCAGCTGCCTCCTCCAGGATGCAACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR GCA 90 bp | CACACAGAAATGAGAGTTGCATCCTGGAGGAGGCAGCTGGCCAGTTaGCTCAAACCCTGCATGTGCCCAGCCATAAAGGAGGCTCCTAGG | + |
Preference number: 1 (lower is better) Translates to: HTEMRVASWRRQLAS*LKPCMCPAIKEAPR Trigger: CCTAGGAGCCTCCTTTATGGCTGGGCACATGCAGGGTTTGAGGCAACTGGCCAGCTGCCTCCTCCAGGATGCAACTCTCATTTCTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR TCA 90 bp | ATGCAGGGACAGGTTTGTAGCATTTGTGCCAAGGTTTCAGGAGACTaGGTTTCAGTGAAACTCTTTTTCTTAGGACTACCTCCAAGCCTT | + |
Preference number: 1 (lower is better) Translates to: MQGQVCSICAKVSGD*VSVKLFFLGLPPSL Trigger: AAGGCTTGGAGGTAGTCCTAAGAAAAAGAGTTTCACTGAAACTCAGTCTCCTGAAACCTTGGCACAAATGCTACAAACCTGTCCCTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR TCA 90 bp | GTGAGCACCAGACTTATAATACCAAAGAAAAACAGGAAAGCTAGGTaGTACATCAGCCAAGGCACATCAAGATGCATAATGGTTCTGTAT | + |
Preference number: 1 (lower is better) Translates to: VSTRLIIPKKNRKAR*YISQGTSRCIMVLY Trigger: ATACAGAACCATTATGCATCTTGATGTGCCTTGGCTGATGTATCACCTAGCTTTCCTGTTTTTCTTTGGTATTATAAGTCTGGTGCTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR CCA 90 bp | TCCTTTGAGTCAAGGTCTCTCAGTAAAACTCAGGTGGCTAGTCTAGCTAGCCATCCTGGAGGAGGCAGCTaGCCAGTTGCCTCAAACCCT | + |
Preference number: 2 (lower is better) Translates to: SFESRSLSKTQVASLASHPGGGS*PVASNP Trigger: AGGGTTTGAGGCAACTGGCCAGCTGCCTCCTCCAGG...ATGGCTAGCTAGACTAGCCACCTGAGTTTTACTGAGAGACCTTGACTCAAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR TCA 90 bp | CTGTCAGCACTGGGGCATTTCATCTGGATGAATGACATTCTTACCAAATTCCAAGGCAGTTGTGAGCCGTaGGACATGGGTGCTGGGAAC | + |
Preference number: 2 (lower is better) Translates to: LSALGHFIWMNDILTKFQGSCEP*DMGAGN Trigger: GTTCCCAGCACCCATGTCTCACGGCTCACAACTGCC...TTGGAATTTGGTAAGAATGTCATTCATCCAGATGAAATGCCCCAGTGCTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR GCA 90 bp | AGTTGTCCTGGAACTTCCTCGGTAAACCAGGGTGGCCTTAAACTCACAGAACATCTCAAACCCTGCATGTaGCCAGCCATAAAGGAGGCT | + |
Preference number: 2 (lower is better) Translates to: SCPGTSSVNQGGLKLTEHLKPCM*PAIKEA Trigger: AGCCTCCTTTATGGCTGGGCACATGCAGGGTTTGAG...ATGTTCTGTGAGTTTAAGGCCACCCTGGTTTACCGAGGAAGTTCCAGGACAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR GCA 90 bp | CTTAGGGTTTCTGGAAGGGCAGCAGGTGCTCTAAACAACCAAAACATCTGCCCTAGTTGCCTCAAACCCTaGATGTGCCCAGCCATAAAG | + |
Preference number: 2 (lower is better) Translates to: LRVSGRAAGALNNQNICPSCLKP*MCPAIK Trigger: CTTTATGGCTGGGCACATGCAGGGTTTGAGGCAACT...AGGGCAGATGTTTTGGTTGTTTAGAGCACCTGCTGCCCTTCCAGAAACCCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR GCA 90 bp | CTTAGGGTTTCTGGAAGGGCAGCAGGTGCTCTAAACAACCAAAACATCTGCCCTCACAGAAATGAGAGTTaGATCCTGGAGGAGGCAGCT | + |
Preference number: 2 (lower is better) Translates to: LRVSGRAAGALNNQNICPHRNES*ILEEAA Trigger: AGCTGCCTCCTCCAGGATGCAACTCTCATTTCTGTG...AGGGCAGATGTTTTGGTTGTTTAGAGCACCTGCTGCCCTTCCAGAAACCCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR TCA 90 bp | TCCTTTGAGTCAAGGTCTCTCAGTAAAACTCAGGTGGCTAGTCTAGCTAGCCATGTGGCTCTGGGAATCTaGACCCAAGTCTCTGGCTTA | + |
Preference number: 2 (lower is better) Translates to: SFESRSLSKTQVASLASHVALGI*TQVSGL Trigger: TAAGCCAGAGACTTGGGTTCAGATTCCCAGAGCCAC...ATGGCTAGCTAGACTAGCCACCTGAGTTTTACTGAGAGACCTTGACTCAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR GCA 90 bp | ATGAATGACATTCTTACCAAATTCCAAGCCCTGGGTCATCTCAAGGACTGCCTAGTGTGTGTGGATGCATaGACATGTGGAGGCCAGAGG | + |
Preference number: 2 (lower is better) Translates to: MNDILTKFQALGHLKDCLVCVDA*TCGGQR Trigger: CCTCTGGCCTCCACATGTGCATGCATCCACACACAC...TAGGCAGTCCTTGAGATGACCCAGGGCTTGGAATTTGGTAAGAATGTCATTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR CCA 90 bp | ATGAATGACATTCTTACCAAATTCCAAGCCCTGGGTCATCTCAAGGACTGCCTAATGAGAGTTGCATCCTaGAGGAGGCAGCTGGCCAGT | + |
Preference number: 2 (lower is better) Translates to: MNDILTKFQALGHLKDCLMRVAS*RRQLAS Trigger: ACTGGCCAGCTGCCTCCTCCAGGATGCAACTCTCAT...TAGGCAGTCCTTGAGATGACCCAGGGCTTGGAATTTGGTAAGAATGTCATTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR CCA 90 bp | ATGAATGACATTCTTACCAAATTCCAAGCCCTGGGTCATCTCAAGGACTGCCTAGGATGCATGCACATGTaGAGGCCAGAGGCTGAAGTC | + |
Preference number: 2 (lower is better) Translates to: MNDILTKFQALGHLKDCLGCMHM*RPEAEV Trigger: GACTTCAGCCTCTGGCCTCCACATGTGCATGCATCC...TAGGCAGTCCTTGAGATGACCCAGGGCTTGGAATTTGGTAAGAATGTCATTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR TCA 90 bp | CTCCCTTGTGCTAGTGCAGGGAAGACATGCATCCACTCTAAGCTGGGGTATAATAAATGCACACAGAAATaGGAGTTGCATCCTGGAGGA | + |
Preference number: 2 (lower is better) Translates to: LPCASAGKTCIHSKLGYNKCTQK*ELHPGG Trigger: TCCTCCAGGATGCAACTCTCATTTCTGTGTGCATTT...ATTATACCCCAGCTTAGAGTGGATGCATGTCTTCCCTGCACTAGCACAAGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR TCA 90 bp | AGTTGTCCTGGAACTTCCTCGGTAAACCAGGGTGGCCTTAAACTCACAGAACATGTATCCCATGCTGGCTaGAAGCTTGAGGTAAACTTC | + |
Preference number: 2 (lower is better) Translates to: SCPGTSSVNQGGLKLTEHVSHAG*KLEVNF Trigger: GAAGTTTACCTCAAGCTTTCAGCCAGCATGGGATAC...ATGTTCTGTGAGTTTAAGGCCACCCTGGTTTACCGAGGAAGTTCCAGGACAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR TCA 90 bp | TCCTTTGAGTCAAGGTCTCTCAGTAAAACTCAGGTGGCTAGTCTAGCTAGCCATGGCATTTGCTCTCCTTaGGCTAGAGTTACAGGCAGT | + |
Preference number: 2 (lower is better) Translates to: SFESRSLSKTQVASLASHGICSP*ARVTGS Trigger: ACTGCCTGTAACTCTAGCTCAAGGAGAGCAAATGCC...ATGGCTAGCTAGACTAGCCACCTGAGTTTTACTGAGAGACCTTGACTCAAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR GCA 90 bp | AGTTGTCCTGGAACTTCCTCGGTAAACCAGGGTGGCCTTAAACTCACAGAACATCAAGTCTCTGGCTTATaGAGCAAGCACTTAAGGGCA | + |
Preference number: 2 (lower is better) Translates to: SCPGTSSVNQGGLKLTEHQVSGL*SKHLRA Trigger: TGCCCTTAAGTGCTTGCTGCATAAGCCAGAGACTTG...ATGTTCTGTGAGTTTAAGGCCACCCTGGTTTACCGAGGAAGTTCCAGGACAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR TCA 90 bp | ATGAATGACATTCTTACCAAATTCCAAGCCCTGGGTCATCTCAAGGACTGCCTACCAACTGTGAAATCTTaGTCCTCCTGCCTCTACCTC | + |
Preference number: 2 (lower is better) Translates to: MNDILTKFQALGHLKDCLPTVKS*SSCLYL Trigger: GAGGTAGAGGCAGGAGGATCAAGATTTCACAGTTGG...TAGGCAGTCCTTGAGATGACCCAGGGCTTGGAATTTGGTAAGAATGTCATTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR TCA 90 bp | CCCTATCTAAAATCAGCTATTCACAGGAGCAAGGTGAAAGGTCTGATGCAATGCTCTGAAGGCCAACTGTaGAATCTTGATCCTCCTGCC | + |
Preference number: 2 (lower is better) Translates to: PYLKSAIHRSKVKGLMQCSEGQL*NLDPPA Trigger: GGCAGGAGGATCAAGATTTCACAGTTGGCCTTCAGA...GCATTGCATCAGACCTTTCACCTTGCTCCTGTGAATAGCTGATTTTAGATAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR CCA 90 bp | AGTTGTCCTGGAACTTCCTCGGTAAACCAGGGTGGCCTTAAACTCACAGAACATTATTGCATGTGGCTCTaGGAATCTGAACCCAAGTCT | + |
Preference number: 2 (lower is better) Translates to: SCPGTSSVNQGGLKLTEHYCMWL*ESEPKS Trigger: AGACTTGGGTTCAGATTCCCAGAGCCACATGCAATA...ATGTTCTGTGAGTTTAAGGCCACCCTGGTTTACCGAGGAAGTTCCAGGACAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR GCA 90 bp | TCCTTTGAGTCAAGGTCTCTCAGTAAAACTCAGGTGGCTAGTCTAGCTAGCCATTGGAAGGGCAGCAGGTaGTCTAAACAACCAAAACAT | + |
Preference number: 2 (lower is better) Translates to: SFESRSLSKTQVASLASHWKGSR*SKQPKH Trigger: ATGTTTTGGTTGTTTAGAGCACCTGCTGCCCTTCCA...ATGGCTAGCTAGACTAGCCACCTGAGTTTTACTGAGAGACCTTGACTCAAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR CCA 90 bp | GTGATACATCAGCCAAGGCACATCAAGATGCATAATGGTTCTGTATACAAAACATCCTGTCTGTGCCTTTaGAGGCTGATATTGCATGTG | + |
Preference number: 2 (lower is better) Translates to: VIHQPRHIKMHNGSVYKTSCLCL*RLILHV Trigger: CACATGCAATATCAGCCTCCAAAGGCACAGACAGGA...TGTTTTGTATACAGAACCATTATGCATCTTGATGTGCCTTGGCTGATGTATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR GCA 72 bp | AGGAGGCAGCTGGCCAGTTGCCTCAAACCCTGCATGTaGCCAGCCATAAAGGAGGCTCCTAGGGAAAACCAG | + |
Preference number: 3 (lower is better) Translates to: RRQLASCLKPCM*PAIKEAPRENQ Trigger: CTGGTTTTCCCTAGGAGCCTCCTTTATGGCTGGGCACATGCAGGGTTTGAGGCAACTGGCCAGCTGCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR GCA 72 bp | ATGAGAGTTGCATCCTGGAGGAGGCAGCTGGCCAGTTaGCTCAAACCCTGCATGTGCCCAGCCATAAAGGAG | + |
Preference number: 3 (lower is better) Translates to: MRVASWRRQLAS*LKPCMCPAIKE Trigger: CTCCTTTATGGCTGGGCACATGCAGGGTTTGAGGCAACTGGCCAGCTGCCTCCTCCAGGATGCAACTCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR CAA 90 bp | AGTTGTCCTGGAACTTCCTCGGTAAACCAGGGTGGCCTTAAACTCACAGAACATGAGGCAGCTGGCCAGTaGCCTCAAACCCTGCATGTG | + |
Preference number: 3 (lower is better) Translates to: SCPGTSSVNQGGLKLTEHEAAGQ*PQTLHV Trigger: CACATGCAGGGTTTGAGGCAACTGGCCAGCTGCCTC...ATGTTCTGTGAGTTTAAGGCCACCCTGGTTTACCGAGGAAGTTCCAGGACAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR TCA 72 bp | CCATCTTTCTGGGATCCTGTCTGTGCCTTTGGAGGCTaGTATTGCATGTGGCTCTGGGAATCTGAACCCAAG | + |
Preference number: 3 (lower is better) Translates to: PSFWDPVCAFGG*YCMWLWESEPK Trigger: CTTGGGTTCAGATTCCCAGAGCCACATGCAATATCAGCCTCCAAAGGCACAGACAGGATCCCAGAAAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR TCA 72 bp | TTTGAGGCAAGGTCTTGTTATGTATCCCATGCTGGCTaGAAGCTTGAGGTAAACTTCCTGCCTTGGTCTCCC | + |
Preference number: 3 (lower is better) Translates to: FEARSCYVSHAG*KLEVNFLPWSP Trigger: GGGAGACCAAGGCAGGAAGTTTACCTCAAGCTTTCAGCCAGCATGGGATACATAACAAGACCTTGCCTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR CAA 90 bp | CCCTATCTAAAATCAGCTATTCACAGGAGCAAGGTGAAAGGTCTGATGCAATGCGCCAACTGTGAAATCTaGATCCTCCTGCCTCTACCT | + |
Preference number: 3 (lower is better) Translates to: PYLKSAIHRSKVKGLMQCANCEI*ILLPLP Trigger: AGGTAGAGGCAGGAGGATCAAGATTTCACAGTTGGC...GCATTGCATCAGACCTTTCACCTTGCTCCTGTGAATAGCTGATTTTAGATAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR TCA 72 bp | AAGGTCTTGTTATGTATCCCATGCTGGCTGAAAGCTTaGGGTAAACTTCCTGCCTTGGTCTCCCTTGTGCTA | + |
Preference number: 3 (lower is better) Translates to: KVLLCIPCWLKA*GKLPALVSLVL Trigger: TAGCACAAGGGAGACCAAGGCAGGAAGTTTACCTCAAGCTTTCAGCCAGCATGGGATACATAACAAGACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR TCA 72 bp | CAGGTTTGTAGCATTTGTGCCAAGGTTTCAGGAGACTaGGTTTCAGTGAAACTCTTTTTCTTAGGACTACCT | + |
Preference number: 3 (lower is better) Translates to: QVCSICAKVSGD*VSVKLFFLGLP Trigger: AGGTAGTCCTAAGAAAAAGAGTTTCACTGAAACTCAGTCTCCTGAAACCTTGGCACAAATGCTACAAACCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR-3UTR CAA 90 bp | CTGTCAGCACTGGGGCATTTCATCTGGATGAATGACATTCTTACCAAATTCCAAAAGTCATCTAATCCTTaGAGTCAAGGTCTCTCAGTA | + |
Preference number: 3 (lower is better) Translates to: LSALGHFIWMNDILTKFQKSSNP*SQGLSV Trigger: TACTGAGAGACCTTGACTCAAAGGATTAGATGACTT...TTGGAATTTGGTAAGAATGTCATTCATCCAGATGAAATGCCCCAGTGCTGACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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CDS-3UTR TCA 90 bp | TCTGGCTTATGCAGCAAGCACTTAAGGGCAGCAGGCATCTCTGAAGGCCAACTGTGCCACCAAGGCACCTaGGAACCAGGATGCACCCAC | + |
Preference number: 4 (lower is better) Translates to: SGLCSKHLRAAGISEGQLCHQGT*EPGCTH Trigger: GTGGGTGCATCCTGGTTCTCAGGTGCCTTGGTGGCA...CAGTTGGCCTTCAGAGATGCCTGCTGCCCTTAAGTGCTTGCTGCATAAGCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR CAA 72 bp | AATGAGAGTTGCATCCTGGAGGAGGCAGCTGGCCAGTaGCCTCAAACCCTGCATGTGCCCAGCCATAAAGGA | + |
Preference number: 4 (lower is better) Translates to: NESCILEEAAGQ*PQTLHVPSHKG Trigger: TCCTTTATGGCTGGGCACATGCAGGGTTTGAGGCAACTGGCCAGCTGCCTCCTCCAGGATGCAACTCTCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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CDS-3UTR TCA 90 bp | AGTTGTCCTGGAACTTCCTCGGTAAACCAGGGTGGCCTTAAACTCACAGAACATCTGCACATGACAGCTTaGGGAGAGCTGGCAGCTCAC | + |
Preference number: 4 (lower is better) Translates to: SCPGTSSVNQGGLKLTEHLHMTA*GELAAH Trigger: GTGAGCTGCCAGCTCTCCTCAAGCTGTCATGTGCAG...ATGTTCTGTGAGTTTAAGGCCACCCTGGTTTACCGAGGAAGTTCCAGGACAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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CDS-3UTR CCA 90 bp | CTTAGGGTTTCTGGAAGGGCAGCAGGTGCTCTAAACAACCAAAACATCTGCCCTAGCTCACAGAAGAAGTaGTCCACGGTGTGTGAGGCA | + |
Preference number: 4 (lower is better) Translates to: LRVSGRAAGALNNQNICPSSQKK*STVCEA Trigger: TGCCTCACACACCGTGGACCACTTCTTCTGTGAGCT...AGGGCAGATGTTTTGGTTGTTTAGAGCACCTGCTGCCCTTCCAGAAACCCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR CAA 72 bp | CTAGCTAGCCATCTTTCTGGGATCCTGTCTGTGCCTTaGGAGGCTGATATTGCATGTGGCTCTGGGAATCTG | + |
Preference number: 4 (lower is better) Translates to: LASHLSGILSVP*EADIACGSGNL Trigger: CAGATTCCCAGAGCCACATGCAATATCAGCCTCCAAAGGCACAGACAGGATCCCAGAAAGATGGCTAGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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CDS-3UTR TCA 90 bp | CTCCCTTGTGCTAGTGCAGGGAAGACATGCATCCACTCTAAGCTGGGGTATAATACACTTGGTTTCTCATaGGCACCTGGTAATGCAGGG | + |
Preference number: 4 (lower is better) Translates to: LPCASAGKTCIHSKLGYNTLGFS*APGNAG Trigger: CCCTGCATTACCAGGTGCTCATGAGAAACCAAGTGT...ATTATACCCCAGCTTAGAGTGGATGCATGTCTTCCCTGCACTAGCACAAGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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CDS-3UTR GCA 90 bp | TCCTTTGAGTCAAGGTCTCTCAGTAAAACTCAGGTGGCTAGTCTAGCTAGCCATTCAGCTGACCGCATGTaGAGTACAGCTCCCAGAACG | + |
Preference number: 4 (lower is better) Translates to: SFESRSLSKTQVASLASHSADRM*STAPRT Trigger: CGTTCTGGGAGCTGTACTGCACATGCGGTCAGCTGA...ATGGCTAGCTAGACTAGCCACCTGAGTTTTACTGAGAGACCTTGACTCAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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CDS-3UTR GCA 90 bp | CTTAGGGTTTCTGGAAGGGCAGCAGGTGCTCTAAACAACCAAAACATCTGCCCTGTACATGAATACAGCTaGCCCATAAAAGAGACCCAC | + |
Preference number: 4 (lower is better) Translates to: LRVSGRAAGALNNQNICPVHEYS*PIKETH Trigger: GTGGGTCTCTTTTATGGGGCAGCTGTATTCATGTAC...AGGGCAGATGTTTTGGTTGTTTAGAGCACCTGCTGCCCTTCCAGAAACCCTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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CDS-3UTR TCA 90 bp | GTGATACATCAGCCAAGGCACATCAAGATGCATAATGGTTCTGTATACAAAACAGTGGTCCACGGTGTGTaGGGCACAGTAAGGGAACTG | + |
Preference number: 4 (lower is better) Translates to: VIHQPRHIKMHNGSVYKTVVHGV*GTVREL Trigger: CAGTTCCCTTACTGTGCCTCACACACCGTGGACCAC...TGTTTTGTATACAGAACCATTATGCATCTTGATGTGCCTTGGCTGATGTATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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CDS-3UTR CCA 90 bp | CCCTATCTAAAATCAGCTATTCACAGGAGCAAGGTGAAAGGTCTGATGCAATGCAACGTTATCCTGTTTTaGGCTGTGGTAGCTGCCTGG | + |
Preference number: 4 (lower is better) Translates to: PYLKSAIHRSKVKGLMQCNVILF*AVVAAW Trigger: CCAGGCAGCTACCACAGCCCAAAACAGGATAACGTT...GCATTGCATCAGACCTTTCACCTTGCTCCTGTGAATAGCTGATTTTAGATAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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3UTR CAA 72 bp | ACATGTGGAGGCCAGAGGCTGAAGTCATCTAATCCTTaGAGTCAAGGTCTCTCAGTAAAACTCAGGTGGCTA | + |
Preference number: 4 (lower is better) Translates to: TCGGQRLKSSNP*SQGLSVKLRWL Trigger: TAGCCACCTGAGTTTTACTGAGAGACCTTGACTCAAAGGATTAGATGACTTCAGCCTCTGGCCTCCACATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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CDS-3UTR TCA 90 bp | CTGTCAGCACTGGGGCATTTCATCTGGATGAATGACATTCTTACCAAATTCCAACTGGGACCATGTACATaGATACAGCTGCCCCATAAA | + |
Preference number: 4 (lower is better) Translates to: LSALGHFIWMNDILTKFQLGPCT*IQLPHK Trigger: TTTATGGGGCAGCTGTATTCATGTACATGGTCCCAG...TTGGAATTTGGTAAGAATGTCATTCATCCAGATGAAATGCCCCAGTGCTGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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CDS TCA 90 bp | AGAAGTGGTCCACGGTGTGTGAGGCACAGTAAGGGAACTGCAGGGTaGTGGAGGTCTGGATGGATGCCACCAAGGCACCTGAGAACCAGG | + |
Preference number: 5 (lower is better) Translates to: RSGPRCVRHSKGTAG*WRSGWMPPRHLRTR Trigger: CCTGGTTCTCAGGTGCCTTGGTGGCATCCATCCAGACCTCCATCACCCTGCAGTTCCCTTACTGTGCCTCACACACCGTGGACCACTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093434.5 ENSMUST00000215324.2 |
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CDS TCA 90 bp | AGAAGGACACCCTCAGAGACACCCATGAGCATGAGGAAGAACATCTaGGTGGCACATCCCCCAAAGCTTATGACATTCTGTCCTTGCAGG | + |
Preference number: 5 (lower is better) Translates to: RRTPSETPMSMRKNI*VAHPPKLMTFCPCR Trigger: CCTGCAAGGACAGAATGTCATAAGCTTTGGGGGATGTGCCACTCAGATGTTCTTCCTCATGCTCATGGGTGTCTCTGAGGGTGTCCTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093434.5 ENSMUST00000215324.2 |
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CDS-3UTR CAA 90 bp | CTTAGGGTTTCTGGAAGGGCAGCAGGTGCTCTAAACAACCAAAACATCTGCCCTCATCACCAGACACACTaGGTTTCTCATGAGCACCTG | + |
Preference number: 5 (lower is better) Translates to: LRVSGRAAGALNNQNICPHHQTH*VSHEHL Trigger: CAGGTGCTCATGAGAAACCAAGTGTGTCTGGTGATG...AGGGCAGATGTTTTGGTTGTTTAGAGCACCTGCTGCCCTTCCAGAAACCCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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CDS-3UTR CAA 90 bp | CCCTATCTAAAATCAGCTATTCACAGGAGCAAGGTGAAAGGTCTGATGCAATGCAACTCAGCCACCACTTaGGGGATGGTAACCAGTGGG | + |
Preference number: 5 (lower is better) Translates to: PYLKSAIHRSKVKGLMQCNSATT*GMVTSG Trigger: CCCACTGGTTACCATCCCCAAAGTGGTGGCTGAGTT...GCATTGCATCAGACCTTTCACCTTGCTCCTGTGAATAGCTGATTTTAGATAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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CDS-3UTR CAA 90 bp | CTGTCAGCACTGGGGCATTTCATCTGGATGAATGACATTCTTACCAAATTCCAATCTGCACATGACAGCTaGAGGAGAGCTGGCAGCTCA | + |
Preference number: 5 (lower is better) Translates to: LSALGHFIWMNDILTKFQSAHDS*RRAGSS Trigger: TGAGCTGCCAGCTCTCCTCAAGCTGTCATGTGCAGA...TTGGAATTTGGTAAGAATGTCATTCATCCAGATGAAATGCCCCAGTGCTGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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CDS-3UTR CAA 90 bp | ATGAATGACATTCTTACCAAATTCCAAGCCCTGGGTCATCTCAAGGACTGCCTACACGTGGTGAAAGCCTaGTGTCTAGCTTCAGCTGAC | + |
Preference number: 5 (lower is better) Translates to: MNDILTKFQALGHLKDCLHVVKA*CLASAD Trigger: GTCAGCTGAAGCTAGACACAAGGCTTTCACCACGTG...TAGGCAGTCCTTGAGATGACCCAGGGCTTGGAATTTGGTAAGAATGTCATTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215324.2 |
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CDS CAA 72 bp | CTGGAGTCTGTGGCAATCAGAAAAAGCAGGGTGGTGTaGCCTAGCAGGCCAATGATGAACACGGTGGCCATG | + |
Preference number: 6 (lower is better) Translates to: LESVAIRKSRVV*PSRPMMNTVAM Trigger: CATGGCCACCGTGTTCATCATTGGCCTGCTAGGCAACACCACCCTGCTTTTTCTGATTGCCACAGACTCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093434.5 ENSMUST00000215324.2 |
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CDS CAA 72 bp | ATGACATTCTGTCCTTGCAGGAACTCAGCCACCACTTaGGGGATGGTAACCAGTGGGAAGCCGACATCCAGA | + |
Preference number: 6 (lower is better) Translates to: MTFCPCRNSATT*GMVTSGKPTSR Trigger: TCTGGATGTCGGCTTCCCACTGGTTACCATCCCCAAAGTGGTGGCTGAGTTCCTGCAAGGACAGAATGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093434.5 ENSMUST00000215324.2 |
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CDS CAA 90 bp | CCAAAGCTTATGACATTCTGTCCTTGCAGGAACTCAGCCACCACTTaGGGGATGGTAACCAGTGGGAAGCCGACATCCAGAAGTGAGAGT | + |
Preference number: 6 (lower is better) Translates to: PKLMTFCPCRNSATT*GMVTSGKPTSRSES Trigger: ACTCTCACTTCTGGATGTCGGCTTCCCACTGGTTACCATCCCCAAAGTGGTGGCTGAGTTCCTGCAAGGACAGAATGTCATAAGCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093434.5 ENSMUST00000215324.2 |
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CDS CCA 72 bp | GAGGCTATAGAAAAGGGATACAACGTTATCCTGTTTTaGGCTGTGGTAGCTGCCTGGGACCATGTACATGAA | + |
Preference number: 6 (lower is better) Translates to: EAIEKGYNVILF*AVVAAWDHVHE Trigger: TTCATGTACATGGTCCCAGGCAGCTACCACAGCCCAAAACAGGATAACGTTGTATCCCTTTTCTATAGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093434.5 ENSMUST00000215324.2 |