RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR372 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000069998

Ensembl transcript IDs: ENSMUST00000093434.5, ENSMUST00000215324.2

Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCATCCTGGAGGAGGCAGCTGGCCAGTTGCCTCAAACCCTGCATGTaGCCAGCCATAAAGGAGGCTCCTAGGGAAAACCAGGATCGAAGG +
Preference number: 1 (lower is better)
Translates to: ASWRRQLASCLKPCM*PAIKEAPRENQDRR
Trigger: CCTTCGATCCTGGTTTTCCCTAGGAGCCTCCTTTATGGCTGGGCACATGCAGGGTTTGAGGCAACTGGCCAGCTGCCTCCTCCAGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR GCA 90 bp AGAGTTGCATCCTGGAGGAGGCAGCTGGCCAGTTGCCTCAAACCCTaGATGTGCCCAGCCATAAAGGAGGCTCCTAGGGAAAACCAGGAT +
Preference number: 1 (lower is better)
Translates to: RVASWRRQLASCLKP*MCPAIKEAPRENQD
Trigger: ATCCTGGTTTTCCCTAGGAGCCTCCTTTATGGCTGGGCACATGCAGGGTTTGAGGCAACTGGCCAGCTGCCTCCTCCAGGATGCAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR GCA 90 bp CACACAGAAATGAGAGTTGCATCCTGGAGGAGGCAGCTGGCCAGTTaGCTCAAACCCTGCATGTGCCCAGCCATAAAGGAGGCTCCTAGG +
Preference number: 1 (lower is better)
Translates to: HTEMRVASWRRQLAS*LKPCMCPAIKEAPR
Trigger: CCTAGGAGCCTCCTTTATGGCTGGGCACATGCAGGGTTTGAGGCAACTGGCCAGCTGCCTCCTCCAGGATGCAACTCTCATTTCTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR TCA 90 bp ATGCAGGGACAGGTTTGTAGCATTTGTGCCAAGGTTTCAGGAGACTaGGTTTCAGTGAAACTCTTTTTCTTAGGACTACCTCCAAGCCTT +
Preference number: 1 (lower is better)
Translates to: MQGQVCSICAKVSGD*VSVKLFFLGLPPSL
Trigger: AAGGCTTGGAGGTAGTCCTAAGAAAAAGAGTTTCACTGAAACTCAGTCTCCTGAAACCTTGGCACAAATGCTACAAACCTGTCCCTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR TCA 90 bp GTGAGCACCAGACTTATAATACCAAAGAAAAACAGGAAAGCTAGGTaGTACATCAGCCAAGGCACATCAAGATGCATAATGGTTCTGTAT +
Preference number: 1 (lower is better)
Translates to: VSTRLIIPKKNRKAR*YISQGTSRCIMVLY
Trigger: ATACAGAACCATTATGCATCTTGATGTGCCTTGGCTGATGTATCACCTAGCTTTCCTGTTTTTCTTTGGTATTATAAGTCTGGTGCTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR CCA 90 bp TCCTTTGAGTCAAGGTCTCTCAGTAAAACTCAGGTGGCTAGTCTAGCTAGCCATCCTGGAGGAGGCAGCTaGCCAGTTGCCTCAAACCCT +
Preference number: 2 (lower is better)
Translates to: SFESRSLSKTQVASLASHPGGGS*PVASNP
Trigger: AGGGTTTGAGGCAACTGGCCAGCTGCCTCCTCCAGG...ATGGCTAGCTAGACTAGCCACCTGAGTTTTACTGAGAGACCTTGACTCAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR TCA 90 bp CTGTCAGCACTGGGGCATTTCATCTGGATGAATGACATTCTTACCAAATTCCAAGGCAGTTGTGAGCCGTaGGACATGGGTGCTGGGAAC +
Preference number: 2 (lower is better)
Translates to: LSALGHFIWMNDILTKFQGSCEP*DMGAGN
Trigger: GTTCCCAGCACCCATGTCTCACGGCTCACAACTGCC...TTGGAATTTGGTAAGAATGTCATTCATCCAGATGAAATGCCCCAGTGCTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR GCA 90 bp AGTTGTCCTGGAACTTCCTCGGTAAACCAGGGTGGCCTTAAACTCACAGAACATCTCAAACCCTGCATGTaGCCAGCCATAAAGGAGGCT +
Preference number: 2 (lower is better)
Translates to: SCPGTSSVNQGGLKLTEHLKPCM*PAIKEA
Trigger: AGCCTCCTTTATGGCTGGGCACATGCAGGGTTTGAG...ATGTTCTGTGAGTTTAAGGCCACCCTGGTTTACCGAGGAAGTTCCAGGACAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR GCA 90 bp CTTAGGGTTTCTGGAAGGGCAGCAGGTGCTCTAAACAACCAAAACATCTGCCCTAGTTGCCTCAAACCCTaGATGTGCCCAGCCATAAAG +
Preference number: 2 (lower is better)
Translates to: LRVSGRAAGALNNQNICPSCLKP*MCPAIK
Trigger: CTTTATGGCTGGGCACATGCAGGGTTTGAGGCAACT...AGGGCAGATGTTTTGGTTGTTTAGAGCACCTGCTGCCCTTCCAGAAACCCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR GCA 90 bp CTTAGGGTTTCTGGAAGGGCAGCAGGTGCTCTAAACAACCAAAACATCTGCCCTCACAGAAATGAGAGTTaGATCCTGGAGGAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: LRVSGRAAGALNNQNICPHRNES*ILEEAA
Trigger: AGCTGCCTCCTCCAGGATGCAACTCTCATTTCTGTG...AGGGCAGATGTTTTGGTTGTTTAGAGCACCTGCTGCCCTTCCAGAAACCCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR TCA 90 bp TCCTTTGAGTCAAGGTCTCTCAGTAAAACTCAGGTGGCTAGTCTAGCTAGCCATGTGGCTCTGGGAATCTaGACCCAAGTCTCTGGCTTA +
Preference number: 2 (lower is better)
Translates to: SFESRSLSKTQVASLASHVALGI*TQVSGL
Trigger: TAAGCCAGAGACTTGGGTTCAGATTCCCAGAGCCAC...ATGGCTAGCTAGACTAGCCACCTGAGTTTTACTGAGAGACCTTGACTCAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR GCA 90 bp ATGAATGACATTCTTACCAAATTCCAAGCCCTGGGTCATCTCAAGGACTGCCTAGTGTGTGTGGATGCATaGACATGTGGAGGCCAGAGG +
Preference number: 2 (lower is better)
Translates to: MNDILTKFQALGHLKDCLVCVDA*TCGGQR
Trigger: CCTCTGGCCTCCACATGTGCATGCATCCACACACAC...TAGGCAGTCCTTGAGATGACCCAGGGCTTGGAATTTGGTAAGAATGTCATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR CCA 90 bp ATGAATGACATTCTTACCAAATTCCAAGCCCTGGGTCATCTCAAGGACTGCCTAATGAGAGTTGCATCCTaGAGGAGGCAGCTGGCCAGT +
Preference number: 2 (lower is better)
Translates to: MNDILTKFQALGHLKDCLMRVAS*RRQLAS
Trigger: ACTGGCCAGCTGCCTCCTCCAGGATGCAACTCTCAT...TAGGCAGTCCTTGAGATGACCCAGGGCTTGGAATTTGGTAAGAATGTCATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR CCA 90 bp ATGAATGACATTCTTACCAAATTCCAAGCCCTGGGTCATCTCAAGGACTGCCTAGGATGCATGCACATGTaGAGGCCAGAGGCTGAAGTC +
Preference number: 2 (lower is better)
Translates to: MNDILTKFQALGHLKDCLGCMHM*RPEAEV
Trigger: GACTTCAGCCTCTGGCCTCCACATGTGCATGCATCC...TAGGCAGTCCTTGAGATGACCCAGGGCTTGGAATTTGGTAAGAATGTCATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR TCA 90 bp CTCCCTTGTGCTAGTGCAGGGAAGACATGCATCCACTCTAAGCTGGGGTATAATAAATGCACACAGAAATaGGAGTTGCATCCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: LPCASAGKTCIHSKLGYNKCTQK*ELHPGG
Trigger: TCCTCCAGGATGCAACTCTCATTTCTGTGTGCATTT...ATTATACCCCAGCTTAGAGTGGATGCATGTCTTCCCTGCACTAGCACAAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR TCA 90 bp AGTTGTCCTGGAACTTCCTCGGTAAACCAGGGTGGCCTTAAACTCACAGAACATGTATCCCATGCTGGCTaGAAGCTTGAGGTAAACTTC +
Preference number: 2 (lower is better)
Translates to: SCPGTSSVNQGGLKLTEHVSHAG*KLEVNF
Trigger: GAAGTTTACCTCAAGCTTTCAGCCAGCATGGGATAC...ATGTTCTGTGAGTTTAAGGCCACCCTGGTTTACCGAGGAAGTTCCAGGACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR TCA 90 bp TCCTTTGAGTCAAGGTCTCTCAGTAAAACTCAGGTGGCTAGTCTAGCTAGCCATGGCATTTGCTCTCCTTaGGCTAGAGTTACAGGCAGT +
Preference number: 2 (lower is better)
Translates to: SFESRSLSKTQVASLASHGICSP*ARVTGS
Trigger: ACTGCCTGTAACTCTAGCTCAAGGAGAGCAAATGCC...ATGGCTAGCTAGACTAGCCACCTGAGTTTTACTGAGAGACCTTGACTCAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR GCA 90 bp AGTTGTCCTGGAACTTCCTCGGTAAACCAGGGTGGCCTTAAACTCACAGAACATCAAGTCTCTGGCTTATaGAGCAAGCACTTAAGGGCA +
Preference number: 2 (lower is better)
Translates to: SCPGTSSVNQGGLKLTEHQVSGL*SKHLRA
Trigger: TGCCCTTAAGTGCTTGCTGCATAAGCCAGAGACTTG...ATGTTCTGTGAGTTTAAGGCCACCCTGGTTTACCGAGGAAGTTCCAGGACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR TCA 90 bp ATGAATGACATTCTTACCAAATTCCAAGCCCTGGGTCATCTCAAGGACTGCCTACCAACTGTGAAATCTTaGTCCTCCTGCCTCTACCTC +
Preference number: 2 (lower is better)
Translates to: MNDILTKFQALGHLKDCLPTVKS*SSCLYL
Trigger: GAGGTAGAGGCAGGAGGATCAAGATTTCACAGTTGG...TAGGCAGTCCTTGAGATGACCCAGGGCTTGGAATTTGGTAAGAATGTCATTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR TCA 90 bp CCCTATCTAAAATCAGCTATTCACAGGAGCAAGGTGAAAGGTCTGATGCAATGCTCTGAAGGCCAACTGTaGAATCTTGATCCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: PYLKSAIHRSKVKGLMQCSEGQL*NLDPPA
Trigger: GGCAGGAGGATCAAGATTTCACAGTTGGCCTTCAGA...GCATTGCATCAGACCTTTCACCTTGCTCCTGTGAATAGCTGATTTTAGATAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR CCA 90 bp AGTTGTCCTGGAACTTCCTCGGTAAACCAGGGTGGCCTTAAACTCACAGAACATTATTGCATGTGGCTCTaGGAATCTGAACCCAAGTCT +
Preference number: 2 (lower is better)
Translates to: SCPGTSSVNQGGLKLTEHYCMWL*ESEPKS
Trigger: AGACTTGGGTTCAGATTCCCAGAGCCACATGCAATA...ATGTTCTGTGAGTTTAAGGCCACCCTGGTTTACCGAGGAAGTTCCAGGACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR GCA 90 bp TCCTTTGAGTCAAGGTCTCTCAGTAAAACTCAGGTGGCTAGTCTAGCTAGCCATTGGAAGGGCAGCAGGTaGTCTAAACAACCAAAACAT +
Preference number: 2 (lower is better)
Translates to: SFESRSLSKTQVASLASHWKGSR*SKQPKH
Trigger: ATGTTTTGGTTGTTTAGAGCACCTGCTGCCCTTCCA...ATGGCTAGCTAGACTAGCCACCTGAGTTTTACTGAGAGACCTTGACTCAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR CCA 90 bp GTGATACATCAGCCAAGGCACATCAAGATGCATAATGGTTCTGTATACAAAACATCCTGTCTGTGCCTTTaGAGGCTGATATTGCATGTG +
Preference number: 2 (lower is better)
Translates to: VIHQPRHIKMHNGSVYKTSCLCL*RLILHV
Trigger: CACATGCAATATCAGCCTCCAAAGGCACAGACAGGA...TGTTTTGTATACAGAACCATTATGCATCTTGATGTGCCTTGGCTGATGTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR GCA 72 bp AGGAGGCAGCTGGCCAGTTGCCTCAAACCCTGCATGTaGCCAGCCATAAAGGAGGCTCCTAGGGAAAACCAG +
Preference number: 3 (lower is better)
Translates to: RRQLASCLKPCM*PAIKEAPRENQ
Trigger: CTGGTTTTCCCTAGGAGCCTCCTTTATGGCTGGGCACATGCAGGGTTTGAGGCAACTGGCCAGCTGCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR GCA 72 bp ATGAGAGTTGCATCCTGGAGGAGGCAGCTGGCCAGTTaGCTCAAACCCTGCATGTGCCCAGCCATAAAGGAG +
Preference number: 3 (lower is better)
Translates to: MRVASWRRQLAS*LKPCMCPAIKE
Trigger: CTCCTTTATGGCTGGGCACATGCAGGGTTTGAGGCAACTGGCCAGCTGCCTCCTCCAGGATGCAACTCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR CAA 90 bp AGTTGTCCTGGAACTTCCTCGGTAAACCAGGGTGGCCTTAAACTCACAGAACATGAGGCAGCTGGCCAGTaGCCTCAAACCCTGCATGTG +
Preference number: 3 (lower is better)
Translates to: SCPGTSSVNQGGLKLTEHEAAGQ*PQTLHV
Trigger: CACATGCAGGGTTTGAGGCAACTGGCCAGCTGCCTC...ATGTTCTGTGAGTTTAAGGCCACCCTGGTTTACCGAGGAAGTTCCAGGACAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR TCA 72 bp CCATCTTTCTGGGATCCTGTCTGTGCCTTTGGAGGCTaGTATTGCATGTGGCTCTGGGAATCTGAACCCAAG +
Preference number: 3 (lower is better)
Translates to: PSFWDPVCAFGG*YCMWLWESEPK
Trigger: CTTGGGTTCAGATTCCCAGAGCCACATGCAATATCAGCCTCCAAAGGCACAGACAGGATCCCAGAAAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR TCA 72 bp TTTGAGGCAAGGTCTTGTTATGTATCCCATGCTGGCTaGAAGCTTGAGGTAAACTTCCTGCCTTGGTCTCCC +
Preference number: 3 (lower is better)
Translates to: FEARSCYVSHAG*KLEVNFLPWSP
Trigger: GGGAGACCAAGGCAGGAAGTTTACCTCAAGCTTTCAGCCAGCATGGGATACATAACAAGACCTTGCCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR CAA 90 bp CCCTATCTAAAATCAGCTATTCACAGGAGCAAGGTGAAAGGTCTGATGCAATGCGCCAACTGTGAAATCTaGATCCTCCTGCCTCTACCT +
Preference number: 3 (lower is better)
Translates to: PYLKSAIHRSKVKGLMQCANCEI*ILLPLP
Trigger: AGGTAGAGGCAGGAGGATCAAGATTTCACAGTTGGC...GCATTGCATCAGACCTTTCACCTTGCTCCTGTGAATAGCTGATTTTAGATAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR TCA 72 bp AAGGTCTTGTTATGTATCCCATGCTGGCTGAAAGCTTaGGGTAAACTTCCTGCCTTGGTCTCCCTTGTGCTA +
Preference number: 3 (lower is better)
Translates to: KVLLCIPCWLKA*GKLPALVSLVL
Trigger: TAGCACAAGGGAGACCAAGGCAGGAAGTTTACCTCAAGCTTTCAGCCAGCATGGGATACATAACAAGACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR TCA 72 bp CAGGTTTGTAGCATTTGTGCCAAGGTTTCAGGAGACTaGGTTTCAGTGAAACTCTTTTTCTTAGGACTACCT +
Preference number: 3 (lower is better)
Translates to: QVCSICAKVSGD*VSVKLFFLGLP
Trigger: AGGTAGTCCTAAGAAAAAGAGTTTCACTGAAACTCAGTCTCCTGAAACCTTGGCACAAATGCTACAAACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR-3UTR CAA 90 bp CTGTCAGCACTGGGGCATTTCATCTGGATGAATGACATTCTTACCAAATTCCAAAAGTCATCTAATCCTTaGAGTCAAGGTCTCTCAGTA +
Preference number: 3 (lower is better)
Translates to: LSALGHFIWMNDILTKFQKSSNP*SQGLSV
Trigger: TACTGAGAGACCTTGACTCAAAGGATTAGATGACTT...TTGGAATTTGGTAAGAATGTCATTCATCCAGATGAAATGCCCCAGTGCTGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
CDS-3UTR TCA 90 bp TCTGGCTTATGCAGCAAGCACTTAAGGGCAGCAGGCATCTCTGAAGGCCAACTGTGCCACCAAGGCACCTaGGAACCAGGATGCACCCAC +
Preference number: 4 (lower is better)
Translates to: SGLCSKHLRAAGISEGQLCHQGT*EPGCTH
Trigger: GTGGGTGCATCCTGGTTCTCAGGTGCCTTGGTGGCA...CAGTTGGCCTTCAGAGATGCCTGCTGCCCTTAAGTGCTTGCTGCATAAGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR CAA 72 bp AATGAGAGTTGCATCCTGGAGGAGGCAGCTGGCCAGTaGCCTCAAACCCTGCATGTGCCCAGCCATAAAGGA +
Preference number: 4 (lower is better)
Translates to: NESCILEEAAGQ*PQTLHVPSHKG
Trigger: TCCTTTATGGCTGGGCACATGCAGGGTTTGAGGCAACTGGCCAGCTGCCTCCTCCAGGATGCAACTCTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
CDS-3UTR TCA 90 bp AGTTGTCCTGGAACTTCCTCGGTAAACCAGGGTGGCCTTAAACTCACAGAACATCTGCACATGACAGCTTaGGGAGAGCTGGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: SCPGTSSVNQGGLKLTEHLHMTA*GELAAH
Trigger: GTGAGCTGCCAGCTCTCCTCAAGCTGTCATGTGCAG...ATGTTCTGTGAGTTTAAGGCCACCCTGGTTTACCGAGGAAGTTCCAGGACAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
CDS-3UTR CCA 90 bp CTTAGGGTTTCTGGAAGGGCAGCAGGTGCTCTAAACAACCAAAACATCTGCCCTAGCTCACAGAAGAAGTaGTCCACGGTGTGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LRVSGRAAGALNNQNICPSSQKK*STVCEA
Trigger: TGCCTCACACACCGTGGACCACTTCTTCTGTGAGCT...AGGGCAGATGTTTTGGTTGTTTAGAGCACCTGCTGCCCTTCCAGAAACCCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR CAA 72 bp CTAGCTAGCCATCTTTCTGGGATCCTGTCTGTGCCTTaGGAGGCTGATATTGCATGTGGCTCTGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: LASHLSGILSVP*EADIACGSGNL
Trigger: CAGATTCCCAGAGCCACATGCAATATCAGCCTCCAAAGGCACAGACAGGATCCCAGAAAGATGGCTAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
CDS-3UTR TCA 90 bp CTCCCTTGTGCTAGTGCAGGGAAGACATGCATCCACTCTAAGCTGGGGTATAATACACTTGGTTTCTCATaGGCACCTGGTAATGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPCASAGKTCIHSKLGYNTLGFS*APGNAG
Trigger: CCCTGCATTACCAGGTGCTCATGAGAAACCAAGTGT...ATTATACCCCAGCTTAGAGTGGATGCATGTCTTCCCTGCACTAGCACAAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
CDS-3UTR GCA 90 bp TCCTTTGAGTCAAGGTCTCTCAGTAAAACTCAGGTGGCTAGTCTAGCTAGCCATTCAGCTGACCGCATGTaGAGTACAGCTCCCAGAACG +
Preference number: 4 (lower is better)
Translates to: SFESRSLSKTQVASLASHSADRM*STAPRT
Trigger: CGTTCTGGGAGCTGTACTGCACATGCGGTCAGCTGA...ATGGCTAGCTAGACTAGCCACCTGAGTTTTACTGAGAGACCTTGACTCAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
CDS-3UTR GCA 90 bp CTTAGGGTTTCTGGAAGGGCAGCAGGTGCTCTAAACAACCAAAACATCTGCCCTGTACATGAATACAGCTaGCCCATAAAAGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: LRVSGRAAGALNNQNICPVHEYS*PIKETH
Trigger: GTGGGTCTCTTTTATGGGGCAGCTGTATTCATGTAC...AGGGCAGATGTTTTGGTTGTTTAGAGCACCTGCTGCCCTTCCAGAAACCCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
CDS-3UTR TCA 90 bp GTGATACATCAGCCAAGGCACATCAAGATGCATAATGGTTCTGTATACAAAACAGTGGTCCACGGTGTGTaGGGCACAGTAAGGGAACTG +
Preference number: 4 (lower is better)
Translates to: VIHQPRHIKMHNGSVYKTVVHGV*GTVREL
Trigger: CAGTTCCCTTACTGTGCCTCACACACCGTGGACCAC...TGTTTTGTATACAGAACCATTATGCATCTTGATGTGCCTTGGCTGATGTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
CDS-3UTR CCA 90 bp CCCTATCTAAAATCAGCTATTCACAGGAGCAAGGTGAAAGGTCTGATGCAATGCAACGTTATCCTGTTTTaGGCTGTGGTAGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PYLKSAIHRSKVKGLMQCNVILF*AVVAAW
Trigger: CCAGGCAGCTACCACAGCCCAAAACAGGATAACGTT...GCATTGCATCAGACCTTTCACCTTGCTCCTGTGAATAGCTGATTTTAGATAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
3UTR CAA 72 bp ACATGTGGAGGCCAGAGGCTGAAGTCATCTAATCCTTaGAGTCAAGGTCTCTCAGTAAAACTCAGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: TCGGQRLKSSNP*SQGLSVKLRWL
Trigger: TAGCCACCTGAGTTTTACTGAGAGACCTTGACTCAAAGGATTAGATGACTTCAGCCTCTGGCCTCCACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
CDS-3UTR TCA 90 bp CTGTCAGCACTGGGGCATTTCATCTGGATGAATGACATTCTTACCAAATTCCAACTGGGACCATGTACATaGATACAGCTGCCCCATAAA +
Preference number: 4 (lower is better)
Translates to: LSALGHFIWMNDILTKFQLGPCT*IQLPHK
Trigger: TTTATGGGGCAGCTGTATTCATGTACATGGTCCCAG...TTGGAATTTGGTAAGAATGTCATTCATCCAGATGAAATGCCCCAGTGCTGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
CDS TCA 90 bp AGAAGTGGTCCACGGTGTGTGAGGCACAGTAAGGGAACTGCAGGGTaGTGGAGGTCTGGATGGATGCCACCAAGGCACCTGAGAACCAGG +
Preference number: 5 (lower is better)
Translates to: RSGPRCVRHSKGTAG*WRSGWMPPRHLRTR
Trigger: CCTGGTTCTCAGGTGCCTTGGTGGCATCCATCCAGACCTCCATCACCCTGCAGTTCCCTTACTGTGCCTCACACACCGTGGACCACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093434.5
ENSMUST00000215324.2
CDS TCA 90 bp AGAAGGACACCCTCAGAGACACCCATGAGCATGAGGAAGAACATCTaGGTGGCACATCCCCCAAAGCTTATGACATTCTGTCCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: RRTPSETPMSMRKNI*VAHPPKLMTFCPCR
Trigger: CCTGCAAGGACAGAATGTCATAAGCTTTGGGGGATGTGCCACTCAGATGTTCTTCCTCATGCTCATGGGTGTCTCTGAGGGTGTCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093434.5
ENSMUST00000215324.2
CDS-3UTR CAA 90 bp CTTAGGGTTTCTGGAAGGGCAGCAGGTGCTCTAAACAACCAAAACATCTGCCCTCATCACCAGACACACTaGGTTTCTCATGAGCACCTG +
Preference number: 5 (lower is better)
Translates to: LRVSGRAAGALNNQNICPHHQTH*VSHEHL
Trigger: CAGGTGCTCATGAGAAACCAAGTGTGTCTGGTGATG...AGGGCAGATGTTTTGGTTGTTTAGAGCACCTGCTGCCCTTCCAGAAACCCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
CDS-3UTR CAA 90 bp CCCTATCTAAAATCAGCTATTCACAGGAGCAAGGTGAAAGGTCTGATGCAATGCAACTCAGCCACCACTTaGGGGATGGTAACCAGTGGG +
Preference number: 5 (lower is better)
Translates to: PYLKSAIHRSKVKGLMQCNSATT*GMVTSG
Trigger: CCCACTGGTTACCATCCCCAAAGTGGTGGCTGAGTT...GCATTGCATCAGACCTTTCACCTTGCTCCTGTGAATAGCTGATTTTAGATAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
CDS-3UTR CAA 90 bp CTGTCAGCACTGGGGCATTTCATCTGGATGAATGACATTCTTACCAAATTCCAATCTGCACATGACAGCTaGAGGAGAGCTGGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LSALGHFIWMNDILTKFQSAHDS*RRAGSS
Trigger: TGAGCTGCCAGCTCTCCTCAAGCTGTCATGTGCAGA...TTGGAATTTGGTAAGAATGTCATTCATCCAGATGAAATGCCCCAGTGCTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
CDS-3UTR CAA 90 bp ATGAATGACATTCTTACCAAATTCCAAGCCCTGGGTCATCTCAAGGACTGCCTACACGTGGTGAAAGCCTaGTGTCTAGCTTCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: MNDILTKFQALGHLKDCLHVVKA*CLASAD
Trigger: GTCAGCTGAAGCTAGACACAAGGCTTTCACCACGTG...TAGGCAGTCCTTGAGATGACCCAGGGCTTGGAATTTGGTAAGAATGTCATTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215324.2
CDS CAA 72 bp CTGGAGTCTGTGGCAATCAGAAAAAGCAGGGTGGTGTaGCCTAGCAGGCCAATGATGAACACGGTGGCCATG +
Preference number: 6 (lower is better)
Translates to: LESVAIRKSRVV*PSRPMMNTVAM
Trigger: CATGGCCACCGTGTTCATCATTGGCCTGCTAGGCAACACCACCCTGCTTTTTCTGATTGCCACAGACTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093434.5
ENSMUST00000215324.2
CDS CAA 72 bp ATGACATTCTGTCCTTGCAGGAACTCAGCCACCACTTaGGGGATGGTAACCAGTGGGAAGCCGACATCCAGA +
Preference number: 6 (lower is better)
Translates to: MTFCPCRNSATT*GMVTSGKPTSR
Trigger: TCTGGATGTCGGCTTCCCACTGGTTACCATCCCCAAAGTGGTGGCTGAGTTCCTGCAAGGACAGAATGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093434.5
ENSMUST00000215324.2
CDS CAA 90 bp CCAAAGCTTATGACATTCTGTCCTTGCAGGAACTCAGCCACCACTTaGGGGATGGTAACCAGTGGGAAGCCGACATCCAGAAGTGAGAGT +
Preference number: 6 (lower is better)
Translates to: PKLMTFCPCRNSATT*GMVTSGKPTSRSES
Trigger: ACTCTCACTTCTGGATGTCGGCTTCCCACTGGTTACCATCCCCAAAGTGGTGGCTGAGTTCCTGCAAGGACAGAATGTCATAAGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093434.5
ENSMUST00000215324.2
CDS CCA 72 bp GAGGCTATAGAAAAGGGATACAACGTTATCCTGTTTTaGGCTGTGGTAGCTGCCTGGGACCATGTACATGAA +
Preference number: 6 (lower is better)
Translates to: EAIEKGYNVILF*AVVAAWDHVHE
Trigger: TTCATGTACATGGTCCCAGGCAGCTACCACAGCCCAAAACAGGATAACGTTGTATCCCTTTTCTATAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093434.5
ENSMUST00000215324.2