Pregenerated sensors for OLFR370 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047286Ensembl transcript IDs: ENSMUST00000058609.5, ENSMUST00000209408.4, ENSMUST00000214156.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGCCTGGAAGATTCCTGGAGATTCACTTGGCTTCTGTCCATGTTaGGATTCAAGGAAGCCATCAAAGGATGGTGGTGGTGTCCACAAC | + |
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Preference number: 1 (lower is better) Translates to: CAWKIPGDSLGFCPC*DSRKPSKDGGGVHN Trigger: GTTGTGGACACCACCACCATCCTTTGATGGCTTCCTTGAATCCCAACATGGACAGAAGCCAAGTGAATCTCCAGGAATCTTCCAGGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR TCA 90 bp | CACCATGTACTTCATAATCAGGTCCAAGGGCCCCTGAGCTGGAACTaGCCTGAATATCTCTTCCCTGAGGAGAGCTTTCATGGTACAAAG | + |
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Preference number: 1 (lower is better) Translates to: HHVLHNQVQGPLSWN*PEYLFPEESFHGTK Trigger: CTTTGTACCATGAAAGCTCTCCTCAGGGAAGAGATATTCAGGTCAGTTCCAGCTCAGGGGCCCTTGGACCTGATTATGAAGTACATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR TCA 90 bp | AAACAACCAATAATCCTCCCCAACTATGACCATGAAACACATCAATaGCCAACAGGGCTCCATAACCCCACAGGTGCAGTAGTGGCACAC | + |
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Preference number: 1 (lower is better) Translates to: KQPIILPNYDHETHQ*PTGLHNPTGAVVAH Trigger: GTGTGCCACTACTGCACCTGTGGGGTTATGGAGCCCTGTTGGTCATTGATGTGTTTCATGGTCATAGTTGGGGAGGATTATTGGTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR CCA 90 bp | CAGCTCTCCAATTGGACTTATGACCTGCTCAATGAGAGGGAAACCTaGCCTAGTGCTGGAATCCTAGCTCACTACTCAGTGCAATTAAGT | + |
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Preference number: 1 (lower is better) Translates to: QLSNWTYDLLNERET*PSAGILAHYSVQLS Trigger: ACTTAATTGCACTGAGTAGTGAGCTAGGATTCCAGCACTAGGCCAGGTTTCCCTCTCATTGAGCAGGTCATAAGTCCAATTGGAGAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR CCA 90 bp | GAGACAAACAAAACAGCTTTCTCTAGTTCTGGCTCTAAACACGTGTaGACTCCTGAGTCACATGAAGATCAGATGCTGGAGACTCTTTGC | + |
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Preference number: 1 (lower is better) Translates to: ETNKTAFSSSGSKHV*TPESHEDQMLETLC Trigger: GCAAAGAGTCTCCAGCATCTGATCTTCATGTGACTCAGGAGTCCACACGTGTTTAGAGCCAGAACTAGAGAAAGCTGTTTTGTTTGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR CCA 90 bp | TATCCCCATAGTGTCTCAAGCTTTAAAGCTATGGAAGAAATGAAGTaGGCTGGCATTCTTAGCGAACAGGCTTTACTCTGTAAAACAAAT | + |
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Preference number: 1 (lower is better) Translates to: YPHSVSSFKAMEEMK*AGILSEQALLCKTN Trigger: ATTTGTTTTACAGAGTAAAGCCTGTTCGCTAAGAATGCCAGCCCACTTCATTTCTTCCATAGCTTTAAAGCTTGAGACACTATGGGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR CAA 90 bp | CTGTGCCTGGAAGATTCCTGGAGATTCACTTGGCTTCTGTCCATGTaGGGATTCAAGGAAGCCATCAAAGGATGGTGGTGGTGTCCACAA | + |
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Preference number: 2 (lower is better) Translates to: LCLEDSWRFTWLLSM*GFKEAIKGWWWCPQ Trigger: TTGTGGACACCACCACCATCCTTTGATGGCTTCCTTGAATCCCAACATGGACAGAAGCCAAGTGAATCTCCAGGAATCTTCCAGGCACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGCTTCTGTCCATGTTGGGATTCAAGGAAGCCATCAAAGGATGGTGGTGGTGGAAAGGCTCTGTTCGTaGTGGGGGAAAATCTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: LASVHVGIQGSHQRMVVVERLCS*WGKISL Trigger: AAGGGAGATTTTCCCCCAGCACGAACAGAGCCTTTC...CACCACCACCATCCTTTGATGGCTTCCTTGAATCCCAACATGGACAGAAGCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGCGGGCAACAAACACCACCTTTTGCCTCAGACCTCTTTACATCCAGACTACGAAAGGCTCTGTTCGTaGTGGGGGAAAATCTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: KAGNKHHLLPQTSLHPDYERLCS*WGKISL Trigger: AAGGGAGATTTTCCCCCAGCACGAACAGAGCCTTTC...GTAGTCTGGATGTAAAGAGGTCTGAGGCAAAAGGTGGTGTTTGTTGCCCGCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR CAA 90 bp | GAGTCTGTTGTCTTGACTTCTTCAGCAGTGAAAGTGTATCAGCTGTaGGGAGCAGAACTTCCTTCCTCCCTAGGCCTTTCCTCTCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: ESVVLTSSAVKVYQL*GAELPSSLGLSSLC Trigger: ACACAGAGAGGAAAGGCCTAGGGAGGAAGGAAGTTCTGCTCCCAACAGCTGATACACTTTCACTGCTGAAGAAGTCAAGACAACAGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR-3UTR TCA 90 bp | ATTCCTGGAGATTCACTTGGCTTCTGTCCATGTTGGGATTCAAGGAAGCCATCAAGTACTCTTACTTGCTaGGCCATCTCACCAGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: IPGDSLGFCPCWDSRKPSSTLTC*AISPAL Trigger: GAGGGCTGGTGAGATGGCTCAGCAAGTAAGAGTACT...TGATGGCTTCCTTGAATCCCAACATGGACAGAAGCCAAGTGAATCTCCAGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGGAGATTCACTTGGCTTCTGTCCATGTTGGGATTCAAGGAAGCCATCAAAGCATTATGGGTGGTTGTaGGCCACCATATGGTTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: PGDSLGFCPCWDSRKPSKHYGWL*ATIWLL Trigger: CAGCAACCATATGGTGGCTCACAACCACCCATAATG...CTTTGATGGCTTCCTTGAATCCCAACATGGACAGAAGCCAAGTGAATCTCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCAGGGCTGTCACCACCTACCATATGCTGTGCCTTCATCAATCAATCAATCAATCCAGACTACATGTTaGAAGGCTCTGTTCGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: AQGCHHLPYAVPSSINQSIQTTC*KALFVL Trigger: CAGCACGAACAGAGCCTTTCAACATGTAGTCTGGAT...TGATTGATTGATTGATGAAGGCACAGCATATGGTAGGTGGTGACAGCCCTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGGGCTGTCACCACCTACCATATGCTGTGCCTTCATCAATCAATCAATCAGCCATCAAAGGATGGTaGTGGTGTCCACAACAACAA | + |
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Preference number: 2 (lower is better) Translates to: AQGCHHLPYAVPSSINQSAIKGW*WCPQQQ Trigger: TTGTTGTTGTGGACACCACCACCATCCTTTGATGGC...TGATTGATTGATTGATGAAGGCACAGCATATGGTAGGTGGTGACAGCCCTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR-3UTR GCA 90 bp | TCTCCAATTGGACTTATGACCTGCTCAATGAGAGGGAAACCTGGCCTAGTGCTGGAGCCACCATATGGTTaGTGGGATTTAAACTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SPIGLMTCSMRGKPGLVLEPPYG*WDLNSG Trigger: TCCTGAGTTTAAATCCCAGCAACCATATGGTGGCTC...CAGCACTAGGCCAGGTTTCCCTCTCATTGAGCAGGTCATAAGTCCAATTGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR-3UTR CCA 90 bp | TCTCCAATTGGACTTATGACCTGCTCAATGAGAGGGAAACCTGGCCTAGTGCTGATCAAAGGATGGTGGTaGTGTCCACAACAACAAACG | + |
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Preference number: 2 (lower is better) Translates to: SPIGLMTCSMRGKPGLVLIKGWW*CPQQQT Trigger: CGTTTGTTGTTGTGGACACCACCACCATCCTTTGAT...CAGCACTAGGCCAGGTTTCCCTCTCATTGAGCAGGTCATAAGTCCAATTGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGGAAGAACCACAAACAGGTGTCTGGATTACTGTGTTCTGTTTCCTAGCCGAAGCCATCAAAGGATaGTGGTGGTGTCCACAACAA | + |
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Preference number: 2 (lower is better) Translates to: SWEEPQTGVWITVFCFLAEAIKG*WWCPQQ Trigger: TTGTTGTGGACACCACCACCATCCTTTGATGGCTTC...GGCTAGGAAACAGAACACAGTAATCCAGACACCTGTTTGTGGTTCTTCCCAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR CAA 90 bp | AACCAAACCAAACCAAATGCTAGGCATGAGAAACCCTGTTTTGAGTaGTTGGCCAGGGTTGCTCAAGAGACTCCTAAGACACACAGCCTA | + |
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Preference number: 2 (lower is better) Translates to: NQTKPNARHEKPCFE*LARVAQETPKTHSL Trigger: TAGGCTGTGTGTCTTAGGAGTCTCTTGAGCAACCCTGGCCAACAACTCAAAACAGGGTTTCTCATGCCTAGCATTTGGTTTGGTTTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR-3UTR GCA 90 bp | GACCTGCTCAATGAGAGGGAAACCTGGCCTAGTGCTGGAATCCTAGCTCACTACACCATGGCACTCAATTaGTTAGTTATTTCCATGTTC | + |
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Preference number: 2 (lower is better) Translates to: DLLNERETWPSAGILAHYTMALN*LVISMF Trigger: GAACATGGAAATAACTAAGCAATTGAGTGCCATGGT...GTAGTGAGCTAGGATTCCAGCACTAGGCCAGGTTTCCCTCTCATTGAGCAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR-3UTR GCA 90 bp | ATTCCTGGAGATTCACTTGGCTTCTGTCCATGTTGGGATTCAAGGAAGCCATCAACAAACACCACCTTTTaGCTCAGACCTCTTTACATC | + |
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Preference number: 2 (lower is better) Translates to: IPGDSLGFCPCWDSRKPSTNTTF*LRPLYI Trigger: GATGTAAAGAGGTCTGAGGCAAAAGGTGGTGTTTGT...TGATGGCTTCCTTGAATCCCAACATGGACAGAAGCCAAGTGAATCTCCAGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR-3UTR TCA 90 bp | AGTAGTGGCTATTCACATGCTGCAGAGGCTGATTATAGATGTATAGATATACATAGTACTCTTACTTGCTaGGCCATCTCACCAGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: SSGYSHAAEADYRCIDIHSTLTC*AISPAL Trigger: GAGGGCTGGTGAGATGGCTCAGCAAGTAAGAGTACT...ATGTATATCTATACATCTATAATCAGCCTCTGCAGCATGTGAATAGCCACTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTACTCTTACTTGCTGAGCCATCTCACCAGCCCTCATGTAATATTCTTTTGTCCAAAACTCTATTTCTaGCCATGGCACTCAATTGCT | + |
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Preference number: 2 (lower is better) Translates to: QYSYLLSHLTSPHVIFFCPKLYF*PWHSIA Trigger: AGCAATTGAGTGCCATGGTCAGAAATAGAGTTTTGG...ACAAAAGAATATTACATGAGGGCTGGTGAGATGGCTCAGCAAGTAAGAGTACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTAGCGAACAGGCTTTACTCTGTAAAACAAATAGCTTTCAGGATGGGAGATGAAAGAGCACAACCTTaGAAAAGAGGGCTTCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: FLANRLYSVKQIAFRMGDERAQP*KRGLPK Trigger: CTTAGGAAGCCCTCTTTTTCAAGGTTGTGCTCTTTC...ATCTCCCATCCTGAAAGCTATTTGTTTTACAGAGTAAAGCCTGTTCGCTAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR-3UTR GCA 90 bp | CAGTACTCTTACTTGCTGAGCCATCTCACCAGCCCTCATGTAATATTCTTTTGTACCATGGCACTCAATTaGTTAGTTATTTCCATGTTC | + |
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Preference number: 2 (lower is better) Translates to: QYSYLLSHLTSPHVIFFCTMALN*LVISMF Trigger: GAACATGGAAATAACTAAGCAATTGAGTGCCATGGT...ACAAAAGAATATTACATGAGGGCTGGTGAGATGGCTCAGCAAGTAAGAGTACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR-3UTR CCA 90 bp | AGATGTATAGATATACATTATAGATGCTCATTCCATGAAGCTGACTTCTCAGCATCCTGGAGATTCACTTaGCTTCTGTCCATGTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: RCIDIHYRCSFHEADFSASWRFT*LLSMLG Trigger: TCCCAACATGGACAGAAGCCAAGTGAATCTCCAGGA...TGCTGAGAAGTCAGCTTCATGGAATGAGCATCTATAATGTATATCTATACATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTAGCGAACAGGCTTTACTCTGTAAAACAAATAGCTTTCAGGATGGGAGATTTCCTGGAAGATCTATaGTGTCAGTCTTCATCACTA | + |
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Preference number: 2 (lower is better) Translates to: FLANRLYSVKQIAFRMGDFLEDL*CQSSSL Trigger: TAGTGATGAAGACTGACAGCATAGATCTTCCAGGAA...ATCTCCCATCCTGAAAGCTATTTGTTTTACAGAGTAAAGCCTGTTCGCTAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR-3UTR CCA 90 bp | AGTAGTGGCTATTCACATGCTGCAGAGGCTGATTATAGATGTATAGATATACATCAAAAAGTCTGTGCCTaGAAGATTCCTGGAGATTCA | + |
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Preference number: 2 (lower is better) Translates to: SSGYSHAAEADYRCIDIHQKVCA*KIPGDS Trigger: TGAATCTCCAGGAATCTTCCAGGCACAGACTTTTTG...ATGTATATCTATACATCTATAATCAGCCTCTGCAGCATGTGAATAGCCACTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR CAA 90 bp | GATGCATTATTATGTGACATCAGTTTAATTATTGTCTTTTCCAGGTaGTCTTTTAGGAAACATGTACTGTGTTGGTGGACCATTAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: DALLCDISLIIVFSR*SFRKHVLCWWTISL Trigger: CAGACTAATGGTCCACCAACACAGTACATGTTTCCTAAAAGACAACCTGGAAAAGACAATAATTAAACTGATGTCACATAATAATGCATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR GCA 72 bp | TGCTCAGCCTGCTTTTTAATTGAACCCAGGACCAACTaGCCAGGGCTGTCACCACCTACCATATGCTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: CSACFLIEPRTN*PGLSPPTICCA Trigger: GGCACAGCATATGGTAGGTGGTGACAGCCCTGGGCAGTTGGTCCTGGGTTCAATTAAAAAGCAGGCTGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR TCA 72 bp | GTTGGCTGTAAGAATGGAACCAGTAGTGCAGTAGTGTaGCCTGCATGGTACGGGACTGCTTGGGTAGTCAGT | + |
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Preference number: 3 (lower is better) Translates to: VGCKNGTSSAVV*PAWYGTAWVVS Trigger: ACTGACTACCCAAGCAGTCCCGTACCATGCAGGTCACACTACTGCACTACTGGTTCCATTCTTACAGCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR TCA 72 bp | GACACCATGTACTTCATAATCAGGTCCAAGGGCCCCTaGGCTGGAACTGACCTGAATATCTCTTCCCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: DTMYFIIRSKGP*AGTDLNISSLR Trigger: CCTCAGGGAAGAGATATTCAGGTCAGTTCCAGCTCAGGGGCCCTTGGACCTGATTATGAAGTACATGGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR TCA 72 bp | CTTGTTCCTTATGGTTTGCTCAGCCTGCTTTTTAATTaGACCCAGGACCAACTGCCCAGGGCTGTCACCACC | + |
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Preference number: 3 (lower is better) Translates to: LVPYGLLSLLFN*TQDQLPRAVTT Trigger: GGTGGTGACAGCCCTGGGCAGTTGGTCCTGGGTTCAATTAAAAAGCAGGCTGAGCAAACCATAAGGAACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR-3UTR CAA 90 bp | TCTCCAATTGGACTTATGACCTGCTCAATGAGAGGGAAACCTGGCCTAGTGCTGTTCCTGGAGATTCACTaGGCTTCTGTCCATGTTGGG | + |
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Preference number: 3 (lower is better) Translates to: SPIGLMTCSMRGKPGLVLFLEIH*ASVHVG Trigger: CCCAACATGGACAGAAGCCAAGTGAATCTCCAGGAA...CAGCACTAGGCCAGGTTTCCCTCTCATTGAGCAGGTCATAAGTCCAATTGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR TCA 72 bp | CTTCATAATCAGGTCCAAGGGCCCCTGAGCTGGAACTaGCCTGAATATCTCTTCCCTGAGGAGAGCTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: LHNQVQGPLSWN*PEYLFPEESFH Trigger: ATGAAAGCTCTCCTCAGGGAAGAGATATTCAGGTCAGTTCCAGCTCAGGGGCCCTTGGACCTGATTATGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR GCA 72 bp | GTAGCAACCAACAGCTCTCCAATTGGACTTATGACCTaGTCAATGAGAGGGAAACCTGGCCTAGTGCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: VATNSSPIGLMT*SMRGKPGLVLE Trigger: TTCCAGCACTAGGCCAGGTTTCCCTCTCATTGAGCAGGTCATAAGTCCAATTGGAGAGCTGTTGGTTGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR CCA 72 bp | AGGGTTGCTCAAGAGACTCCTAAGACACACAGCCTATaGCTTTTGCCCTTGGTTGCCTTTCACAAGTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: RVAQETPKTHSL*LLPLVAFHKWK Trigger: CTTCCACTTGTGAAAGGCAACCAAGGGCAAAAGCCATAGGCTGTGTGTCTTAGGAGTCTCTTGAGCAACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR-3UTR CAA 90 bp | GCCCAGGGCTGTCACCACCTACCATATGCTGTGCCTTCATCAATCAATCAATCAAAAGTGTATCAGCTGTaGGGAGCAGAACTTCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: AQGCHHLPYAVPSSINQSKVYQL*GAELPS Trigger: GGAAGGAAGTTCTGCTCCCAACAGCTGATACACTTT...TGATTGATTGATTGATGAAGGCACAGCATATGGTAGGTGGTGACAGCCCTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR GCA 72 bp | GATCTCATTATGGGTGGTTGTGAGCCACCATATGGTTaGTGGGATTTAAACTCAGGACCTGTGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLIMGGCEPPYG*WDLNSGPVEEQ Trigger: CTGCTCTTCCACAGGTCCTGAGTTTAAATCCCAGCAACCATATGGTGGCTCACAACCACCCATAATGAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR CCA 72 bp | CTCATTATGGGTGGTTGTGAGCCACCATATGGTTGCTaGGATTTAAACTCAGGACCTGTGGAAGAGCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: LIMGGCEPPYGC*DLNSGPVEEQS Trigger: TGACTGCTCTTCCACAGGTCCTGAGTTTAAATCCCAGCAACCATATGGTGGCTCACAACCACCCATAATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR CCA 72 bp | CTGTCCATGTTGGGATTCAAGGAAGCCATCAAAGGATaGTGGTGGTGTCCACAACAACAAACGCAACATTCG | + |
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Preference number: 3 (lower is better) Translates to: LSMLGFKEAIKG*WWCPQQQTQHS Trigger: CGAATGTTGCGTTTGTTGTTGTGGACACCACCACCATCCTTTGATGGCTTCCTTGAATCCCAACATGGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR CCA 72 bp | AATTGGACTTATGACCTGCTCAATGAGAGGGAAACCTaGCCTAGTGCTGGAATCCTAGCTCACTACTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: NWTYDLLNERET*PSAGILAHYSV Trigger: CACTGAGTAGTGAGCTAGGATTCCAGCACTAGGCCAGGTTTCCCTCTCATTGAGCAGGTCATAAGTCCAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR CCA 72 bp | AGACTCCTAAGACACACAGCCTATGGCTTTTGCCCTTaGTTGCCTTTCACAAGTGGAAGGATAGTCCTTACC | + |
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Preference number: 3 (lower is better) Translates to: RLLRHTAYGFCP*LPFTSGRIVLT Trigger: GGTAAGGACTATCCTTCCACTTGTGAAAGGCAACCAAGGGCAAAAGCCATAGGCTGTGTGTCTTAGGAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR CCA 72 bp | AAGATTCCTGGAGATTCACTTGGCTTCTGTCCATGTTaGGATTCAAGGAAGCCATCAAAGGATGGTGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: KIPGDSLGFCPC*DSRKPSKDGGG Trigger: ACCACCACCATCCTTTGATGGCTTCCTTGAATCCCAACATGGACAGAAGCCAAGTGAATCTCCAGGAATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCAGGGCTGTCACCACCTACCATATGCTGTGCCTTCATCAATCAATCAATCAGACCATGGCACTCAATaGCTTAGTTATTTCCATGTT | + |
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Preference number: 3 (lower is better) Translates to: AQGCHHLPYAVPSSINQSDHGTQ*LSYFHV Trigger: AACATGGAAATAACTAAGCAATTGAGTGCCATGGTC...TGATTGATTGATTGATGAAGGCACAGCATATGGTAGGTGGTGACAGCCCTGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR CCA 72 bp | AGAGGCAGATCCTGGGAAGAACCACAAACAGGTGTCTaGATTACTGTGTTCTGTTTCCTAGCCTGTCATAAA | + |
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Preference number: 3 (lower is better) Translates to: RGRSWEEPQTGV*ITVFCFLACHK Trigger: TTTATGACAGGCTAGGAAACAGAACACAGTAATCCAGACACCTGTTTGTGGTTCTTCCCAGGATCTGCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR GCA 72 bp | GGATTGGTCCTGTTTACTGACTTGTTCCTTATGGTTTaGTCAGCCTGCTTTTTAATTGAACCCAGGACCAAC | + |
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Preference number: 3 (lower is better) Translates to: GLVLFTDLFLMV*SACFLIEPRTN Trigger: GTTGGTCCTGGGTTCAATTAAAAAGCAGGCTGAGCAAACCATAAGGAACAAGTCAGTAAACAGGACCAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR CCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACTaGAATGACCAAGAAGCTCAGTTTAAACTTGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCVCVCD*NDQEAQFKLER Trigger: TCTCTCAAGTTTAAACTGAGCTTCTTGGTCATTCCAGTCACACACACACACACACACACACACACACACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR CCA 72 bp | TCCAGGTTGTCTTTTAGGAAACATGTACTGTGTTGGTaGACCATTAGTCTGTTTTCCATGGAGTCTGTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SRLSFRKHVLCW*TISLFSMESVV Trigger: GACAACAGACTCCATGGAAAACAGACTAATGGTCCACCAACACAGTACATGTTTCCTAAAAGACAACCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
||
| 3UTR-3UTR CAA 90 bp | TGTATAGATATACATTATAGATGCTCATTCCATGAAGCTGACTTCTCAGCACTCTGGCTTCTGTCCATGTaGGGATTCAAGGAAGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: CIDIHYRCSFHEADFSALWLLSM*GFKEAI Trigger: GATGGCTTCCTTGAATCCCAACATGGACAGAAGCCA...GAGTGCTGAGAAGTCAGCTTCATGGAATGAGCATCTATAATGTATATCTATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| 3UTR TCA 72 bp | ATAGGATTCAGACATTATTCAGAAAGAGCACAACCTTaGAAAAGAGGGCTTCCTAAGTGCATAGGACAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: IGFRHYSERAQP*KRGLPKCIGQG Trigger: ACCCTGTCCTATGCACTTAGGAAGCCCTCTTTTTCAAGGTTGTGCTCTTTCTGAATAATGTCTGAATCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| 3UTR TCA 72 bp | TTATTTGACTTACATTTCCATATCACTGTTCATCACTaGAGGAAGTCAGCGCAGGAACTTAAACAGGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LFDLHFHITVHH*RKSAQELKQGN Trigger: GTTGCCCTGTTTAAGTTCCTGCGCTGACTTCCTTCAGTGATGAACAGTGATATGGAAATGTAAGTCAAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
||
| 3UTR-3UTR CAA 90 bp | TGTATAGATATACATTATAGATGCTCATTCCATGAAGCTGACTTCTCAGCACTCGACCATGGCACTCAATaGCTTAGTTATTTCCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: CIDIHYRCSFHEADFSALDHGTQ*LSYFHV Trigger: AACATGGAAATAACTAAGCAATTGAGTGCCATGGTC...GAGTGCTGAGAAGTCAGCTTCATGGAATGAGCATCTATAATGTATATCTATACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| 3UTR TCA 72 bp | TTCTTGATGCAGGTATCTCTTGGATGCATTATTATGTaGCATCAGTTTAATTATTGTCTTTTCCAGGTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: FLMQVSLGCIIM*HQFNYCLFQVV Trigger: GACAACCTGGAAAAGACAATAATTAAACTGATGTCACATAATAATGCATCCAAGAGATACCTGCATCAAGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
||
| CDS-3UTR CCA 90 bp | GCCCAGGGCTGTCACCACCTACCATATGCTGTGCCTTCATCAATCAATCAATCAGGCTGGAAGAGTAGCTaGACTTGGGCCTTAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQGCHHLPYAVPSSINQSGWKSS*TWALGR Trigger: TCTACCTAAGGCCCAAGTCCAGCTACTCTTCCAGCC...TGATTGATTGATTGATGAAGGCACAGCATATGGTAGGTGGTGACAGCCCTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
||
| CDS-3UTR TCA 90 bp | AAGTCTGTGCCTGGAAGATTCCTGGAGATTCACTTGGCTTCTGTCCATGTTGGGCGTTGGTGCTCAGAGTaGACAAATAGAGGGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSVPGRFLEIHLASVHVGRWCSE*TNRGTG Trigger: TCCTGTCCCTCTATTTGTTCACTCTGAGCACCAACG...CCCAACATGGACAGAAGCCAAGTGAATCTCCAGGAATCTTCCAGGCACAGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR TCA 90 bp | CAGACCTCTTTACATCCAGACTACATGTTGAAAGGCTCTGTTCGTGCTGGGGGAAAGTACATGGGCGTATaGAGGGCTCTGTCTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QTSLHPDYMLKGSVRAGGKYMGV*RALSST Trigger: TGTGCTAGACAGAGCCCTTCATACGCCCATGTACTT...TCCCCCAGCACGAACAGAGCCTTTCAACATGTAGTCTGGATGTAAAGAGGTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR TCA 90 bp | AAGTCTGTGCCTGGAAGATTCCTGGAGATTCACTTGGCTTCTGTCCATGTTGGGAAAGCAGGAAGATGGTaGTCTGAGTGGAGTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSVPGRFLEIHLASVHVGKAGRW*SEWSEG Trigger: ACCCTCACTCCACTCAGATCACCATCTTCCTGCTTT...CCCAACATGGACAGAAGCCAAGTGAATCTCCAGGAATCTTCCAGGCACAGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR CCA 90 bp | GCCCAGGGCTGTCACCACCTACCATATGCTGTGCCTTCATCAATCAATCAATCAAGTGGTGGAGTTGATTaGAAGAGCGGAAGGGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AQGCHHLPYAVPSSINQSSGGVD*KSGRVD Trigger: GTCTACCCTTCCGCTCTTCCAATCAACTCCACCACT...TGATTGATTGATTGATGAAGGCACAGCATATGGTAGGTGGTGACAGCCCTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
||
| CDS-3UTR CCA 90 bp | GACCTGCTCAATGAGAGGGAAACCTGGCCTAGTGCTGGAATCCTAGCTCACTACAGCGTGGAAGGGAATTaGAGGATGGTAGAAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: DLLNERETWPSAGILAHYSVEGN*RMVEMM Trigger: CATCATTTCTACCATCCTCCAATTCCCTTCCACGCT...GTAGTGAGCTAGGATTCCAGCACTAGGCCAGGTTTCCCTCTCATTGAGCAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
||
| 3UTR CAA 72 bp | GTCTTGACTTCTTCAGCAGTGAAAGTGTATCAGCTGTaGGGAGCAGAACTTCCTTCCTCCCTAGGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSAVKVYQL*GAELPSSLGLS Trigger: GGAAAGGCCTAGGGAGGAAGGAAGTTCTGCTCCCAACAGCTGATACACTTTCACTGCTGAAGAAGTCAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
||
| 3UTR CAA 72 bp | CTCCTAAGACACACAGCCTATGGCTTTTGCCCTTGGTaGCCTTTCACAAGTGGAAGGATAGTCCTTACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLRHTAYGFCPW*PFTSGRIVLTA Trigger: AGCGGTAAGGACTATCCTTCCACTTGTGAAAGGCAACCAAGGGCAAAAGCCATAGGCTGTGTGTCTTAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
||
| 3UTR CAA 72 bp | ACTCAGGACCTGTGGAAGAGCAGTCAGTACTCTTACTaGCTGAGCCATCTCACCAGCCCTCATGTAATATTC | + |
|
Preference number: 4 (lower is better) Translates to: TQDLWKSSQYSY*LSHLTSPHVIF Trigger: GAATATTACATGAGGGCTGGTGAGATGGCTCAGCAAGTAAGAGTACTGACTGCTCTTCCACAGGTCCTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| 3UTR CAA 72 bp | GAAGATTCCTGGAGATTCACTTGGCTTCTGTCCATGTaGGGATTCAAGGAAGCCATCAAAGGATGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EDSWRFTWLLSM*GFKEAIKGWWW Trigger: CCACCACCATCCTTTGATGGCTTCCTTGAATCCCAACATGGACAGAAGCCAAGTGAATCTCCAGGAATCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| 3UTR CAA 72 bp | GAGACTCCTAAGACACACAGCCTATGGCTTTTGCCCTaGGTTGCCTTTCACAAGTGGAAGGATAGTCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ETPKTHSLWLLP*VAFHKWKDSPY Trigger: GTAAGGACTATCCTTCCACTTGTGAAAGGCAACCAAGGGCAAAAGCCATAGGCTGTGTGTCTTAGGAGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
||
| 3UTR CAA 72 bp | GCTCAAGAGACTCCTAAGACACACAGCCTATGGCTTTaGCCCTTGGTTGCCTTTCACAAGTGGAAGGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: AQETPKTHSLWL*PLVAFHKWKDS Trigger: ACTATCCTTCCACTTGTGAAAGGCAACCAAGGGCAAAAGCCATAGGCTGTGTGTCTTAGGAGTCTCTTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
||
| CDS-3UTR CCA 90 bp | CTCTTACTTGCTGAGCCATCTCACCAGCCCTCATGTAATATTCTTTTGTGGACAGGCTGGAAGAGTAGCTaGACTTGGGCCTTAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLAEPSHQPSCNILLWTGWKSS*TWALGR Trigger: TCTACCTAAGGCCCAAGTCCAGCTACTCTTCCAGCC...TGTCCACAAAAGAATATTACATGAGGGCTGGTGAGATGGCTCAGCAAGTAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR TCA 90 bp | ATTCCTGGAGATTCACTTGGCTTCTGTCCATGTTGGGATTCAAGGAAGCCATCAGATAGTGTAGGATACTaGTATCAGCGCATCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPGDSLGFCPCWDSRKPSDSVGY*YQRILA Trigger: AGCCAGGATGCGCTGATATCAGTATCCTACACTATC...TGATGGCTTCCTTGAATCCCAACATGGACAGAAGCCAAGTGAATCTCCAGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR GCA 90 bp | ATTAGTCTGTTTTCCATGGAGTCTGTTGTCTTGACTTCTTCAGCAGTGAAAGTGAGCCGAGGAAAGAGATaGTCTTCTTCCGCGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISLFSMESVVLTSSAVKVSRGKR*SSSAPA Trigger: TGCTGGCGCGGAAGAAGAGCATCTCTTTCCTCGGCT...CACTTTCACTGCTGAAGAAGTCAAGACAACAGACTCCATGGAAAACAGACTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
||
| 3UTR CAA 72 bp | AAAAAGTCTGTGCCTGGAAGATTCCTGGAGATTCACTaGGCTTCTGTCCATGTTGGGATTCAAGGAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KKSVPGRFLEIH*ASVHVGIQGSH Trigger: ATGGCTTCCTTGAATCCCAACATGGACAGAAGCCAAGTGAATCTCCAGGAATCTTCCAGGCACAGACTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| 3UTR CAA 72 bp | AAACCAAATGCTAGGCATGAGAAACCCTGTTTTGAGTaGTTGGCCAGGGTTGCTCAAGAGACTCCTAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KPNARHEKPCFE*LARVAQETPKT Trigger: TGTCTTAGGAGTCTCTTGAGCAACCCTGGCCAACAACTCAAAACAGGGTTTCTCATGCCTAGCATTTGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
||
| 3UTR CAA 72 bp | AAACCAAACCAAATGCTAGGCATGAGAAACCCTGTTTaGAGTTGTTGGCCAGGGTTGCTCAAGAGACTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KPNQMLGMRNPV*SCWPGLLKRLL Trigger: TAGGAGTCTCTTGAGCAACCCTGGCCAACAACTCAAAACAGGGTTTCTCATGCCTAGCATTTGGTTTGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
||
| CDS-3UTR GCA 90 bp | CAATTGCTTAGTTATTTCCATGTTCAGAATTTCCCTCCGAGTCCGTTATTCTTAAGCCGAGGAAAGAGATaGTCTTCTTCCGCGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLLSYFHVQNFPPSPLFLSRGKR*SSSAPA Trigger: TGCTGGCGCGGAAGAAGAGCATCTCTTTCCTCGGCT...TAAGAATAACGGACTCGGAGGGAAATTCTGAACATGGAAATAACTAAGCAATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058609.5 ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR GCA 90 bp | TTGCTTAGTTATTTCCATGTTCAGAATTTCCCTCCGAGTCCGTTATTCTTAGTTAGCCGAGGAAAGAGATaGTCTTCTTCCGCGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSYFHVQNFPPSPLFLVSRGKR*SSSAPA Trigger: TGCTGGCGCGGAAGAAGAGCATCTCTTTCCTCGGCT...AACTAAGAATAACGGACTCGGAGGGAAATTCTGAACATGGAAATAACTAAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058609.5 ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR GCA 90 bp | TGTATAGATATACATTATAGATGCTCATTCCATGAAGCTGACTTCTCAGCACTCGTGAGGGTGGTGAGATaGCAACTGGAGAACAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CIDIHYRCSFHEADFSALVRVVR*QLENRG Trigger: TCCCCTGTTCTCCAGTTGGCATCTCACCACCCTCAC...GAGTGCTGAGAAGTCAGCTTCATGGAATGAGCATCTATAATGTATATCTATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR GCA 90 bp | TTATTTCCATGTTCAGAATTTCCCTCCGAGTCCGTTATTCTTAGTTATTTGAGAGTGAGGGTGGTGAGATaGCAACTGGAGAACAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFPCSEFPSESVILSYLRVRVVR*QLENRG Trigger: TCCCCTGTTCTCCAGTTGGCATCTCACCACCCTCAC...TCTCAAATAACTAAGAATAACGGACTCGGAGGGAAATTCTGAACATGGAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058609.5 ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTTAGTTATTTCCATGTTCAGAATTTCCCTCCGAGTCCGTTATTCTTAGTTGGCTGGAAGAGTAGCTaGACTTGGGCCTTAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLSYFHVQNFPPSPLFLVGWKSS*TWALGR Trigger: TCTACCTAAGGCCCAAGTCCAGCTACTCTTCCAGCC...AACTAAGAATAACGGACTCGGAGGGAAATTCTGAACATGGAAATAACTAAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058609.5 ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR TCA 90 bp | TTGCTTAGTTATTTCCATGTTCAGAATTTCCCTCCGAGTCCGTTATTCTTAGTTAAAGCAGGAAGATGGTaGTCTGAGTGGAGTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLSYFHVQNFPPSPLFLVKAGRW*SEWSEG Trigger: ACCCTCACTCCACTCAGATCACCATCTTCCTGCTTT...AACTAAGAATAACGGACTCGGAGGGAAATTCTGAACATGGAAATAACTAAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058609.5 ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR TCA 90 bp | AATAGGATTCAGACATTATTCAGAAAGAGCACAACCTTGAAAAAGAGGGCTTCCGATAGTGTAGGATACTaGTATCAGCGCATCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NRIQTLFRKSTTLKKRASDSVGY*YQRILA Trigger: AGCCAGGATGCGCTGATATCAGTATCCTACACTATC...GGAAGCCCTCTTTTTCAAGGTTGTGCTCTTTCTGAATAATGTCTGAATCCTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTTAGTTATTTCCATGTTCAGAATTTCCCTCCGAGTCCGTTATTCTTAGTTAGAGGGACAGGAAGATaGCAAAGAGTAGCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSYFHVQNFPPSPLFLVRGTGR*QRVAAA Trigger: TGCAGCTGCTACTCTTTGCCATCTTCCTGTCCCTCT...AACTAAGAATAACGGACTCGGAGGGAAATTCTGAACATGGAAATAACTAAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058609.5 ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR CCA 90 bp | TGTATAGATATACATTATAGATGCTCATTCCATGAAGCTGACTTCTCAGCACTCAGAGGGACAGGAAGATaGCAAAGAGTAGCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CIDIHYRCSFHEADFSALRGTGR*QRVAAA Trigger: TGCAGCTGCTACTCTTTGCCATCTTCCTGTCCCTCT...GAGTGCTGAGAAGTCAGCTTCATGGAATGAGCATCTATAATGTATATCTATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTTAGTTATTTCCATGTTCAGAATTTCCCTCCGAGTCCGTTATTCTTAGTTAGTGGTGGAGTTGATTaGAAGAGCGGAAGGGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLSYFHVQNFPPSPLFLVSGGVD*KSGRVD Trigger: GTCTACCCTTCCGCTCTTCCAATCAACTCCACCACT...AACTAAGAATAACGGACTCGGAGGGAAATTCTGAACATGGAAATAACTAAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058609.5 ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR TCA 90 bp | TTATTTCCATGTTCAGAATTTCCCTCCGAGTCCGTTATTCTTAGTTATTTGAGACGTTGGTGCTCAGAGTaGACAAATAGAGGGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFPCSEFPSESVILSYLRRWCSE*TNRGTG Trigger: TCCTGTCCCTCTATTTGTTCACTCTGAGCACCAACG...TCTCAAATAACTAAGAATAACGGACTCGGAGGGAAATTCTGAACATGGAAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058609.5 ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR TCA 90 bp | AGATGTATAGATATACATTATAGATGCTCATTCCATGAAGCTGACTTCTCAGCACGTTGGTGCTCAGAGTaGACAAATAGAGGGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RCIDIHYRCSFHEADFSARWCSE*TNRGTG Trigger: TCCTGTCCCTCTATTTGTTCACTCTGAGCACCAACG...TGCTGAGAAGTCAGCTTCATGGAATGAGCATCTATAATGTATATCTATACATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR TCA 90 bp | CTTAGTTATTTCCATGTTCAGAATTTCCCTCCGAGTCCGTTATTCTTAGTTATTAAGTACATGGGCGTATaGAGGGCTCTGTCTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSYFHVQNFPPSPLFLVIKYMGV*RALSST Trigger: TGTGCTAGACAGAGCCCTTCATACGCCCATGTACTT...AATAACTAAGAATAACGGACTCGGAGGGAAATTCTGAACATGGAAATAACTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058609.5 ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR TCA 90 bp | TTTCCATGTTCAGAATTTCCCTCCGAGTCCGTTATTCTTAGTTATTTGAGATATAAAGCAGGAAGATGGTaGTCTGAGTGGAGTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FPCSEFPSESVILSYLRYKAGRW*SEWSEG Trigger: ACCCTCACTCCACTCAGATCACCATCTTCCTGCTTT...ATATCTCAAATAACTAAGAATAACGGACTCGGAGGGAAATTCTGAACATGGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058609.5 ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR TCA 90 bp | CAATTGCTTAGTTATTTCCATGTTCAGAATTTCCCTCCGAGTCCGTTATTCTTAGATAGTGTAGGATACTaGTATCAGCGCATCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLLSYFHVQNFPPSPLFLDSVGY*YQRILA Trigger: AGCCAGGATGCGCTGATATCAGTATCCTACACTATC...TAAGAATAACGGACTCGGAGGGAAATTCTGAACATGGAAATAACTAAGCAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058609.5 ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR CCA 90 bp | CCATGTTCAGAATTTCCCTCCGAGTCCGTTATTCTTAGTTATTTGAGATATAAAAGAGGGACAGGAAGATaGCAAAGAGTAGCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PCSEFPSESVILSYLRYKRGTGR*QRVAAA Trigger: TGCAGCTGCTACTCTTTGCCATCTTCCTGTCCCTCT...TTTATATCTCAAATAACTAAGAATAACGGACTCGGAGGGAAATTCTGAACATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058609.5 ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCATGTTCAGAATTTCCCTCCGAGTCCGTTATTCTTAGTTATTTGAGATATAGTGGTGGAGTTGATTaGAAGAGCGGAAGGGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FPCSEFPSESVILSYLRYSGGVD*KSGRVD Trigger: GTCTACCCTTCCGCTCTTCCAATCAACTCCACCACT...ATATCTCAAATAACTAAGAATAACGGACTCGGAGGGAAATTCTGAACATGGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058609.5 ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR CCA 90 bp | CTCAATTGCTTAGTTATTTCCATGTTCAGAATTTCCCTCCGAGTCCGTTATTCTAGCGTGGAAGGGAATTaGAGGATGGTAGAAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: LNCLVISMFRISLRVRYSSVEGN*RMVEMM Trigger: CATCATTTCTACCATCCTCCAATTCCCTTCCACGCT...AGAATAACGGACTCGGAGGGAAATTCTGAACATGGAAATAACTAAGCAATTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058609.5 ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR CCA 90 bp | TGGATTACTGTGTTCTGTTTCCTAGCCTGTCATAAAGAGACAAACAAAACAGCTTGTCTAGCACAATGGTaGAAACAATTACAGCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WITVFCFLACHKETNKTACLAQW*KQLQRW Trigger: CCAACGCTGTAATTGTTTCCACCATTGTGCTAGACA...AGCTGTTTTGTTTGTCTCTTTATGACAGGCTAGGAAACAGAACACAGTAATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
||
| CDS-3UTR CCA 90 bp | CAATTGCTTAGTTATTTCCATGTTCAGAATTTCCCTCCGAGTCCGTTATTCTTATGTCTAGCACAATGGTaGAAACAATTACAGCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSYFHVQNFPPSPLFLCLAQW*KQLQRW Trigger: CCAACGCTGTAATTGTTTCCACCATTGTGCTAGACA...TAAGAATAACGGACTCGGAGGGAAATTCTGAACATGGAAATAACTAAGCAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058609.5 ENSMUST00000209408.4 ENSMUST00000214156.2 |
||
| CDS-3UTR CCA 90 bp | TTATTTCCATGTTCAGAATTTCCCTCCGAGTCCGTTATTCTTAGTTATTTGAGAAGCGTGGAAGGGAATTaGAGGATGGTAGAAATGATG | + |
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Preference number: 4 (lower is better) Translates to: LFPCSEFPSESVILSYLRSVEGN*RMVEMM Trigger: CATCATTTCTACCATCCTCCAATTCCCTTCCACGCT...TCTCAAATAACTAAGAATAACGGACTCGGAGGGAAATTCTGAACATGGAAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058609.5 ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR CAA 72 bp | AAAAACCAAAACTCTATTTCTGACCATGGCACTCAATaGCTTAGTTATTTCCATGTTCAGAATTTCCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: KNQNSISDHGTQ*LSYFHVQNFPP Trigger: CGGAGGGAAATTCTGAACATGGAAATAACTAAGCAATTGAGTGCCATGGTCAGAAATAGAGTTTTGGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| 3UTR CAA 72 bp | TTATGTGACATCAGTTTAATTATTGTCTTTTCCAGGTaGTCTTTTAGGAAACATGTACTGTGTTGGTGGACC | + |
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Preference number: 4 (lower is better) Translates to: LCDISLIIVFSR*SFRKHVLCWWT Trigger: GGTCCACCAACACAGTACATGTTTCCTAAAAGACAACCTGGAAAAGACAATAATTAAACTGATGTCACATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| 3UTR CAA 72 bp | ATAAATTCATGCATCATTTTTGCCTTAAGTAAGCCTTaGGTATTCTTGATGCAGGTATCTCTTGGATGCATT | + |
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Preference number: 4 (lower is better) Translates to: INSCIIFALSKP*VFLMQVSLGCI Trigger: AATGCATCCAAGAGATACCTGCATCAAGAATACCAAAGGCTTACTTAAGGCAAAAATGATGCATGAATTTAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209408.4 |
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| CDS-3UTR CAA 90 bp | TTGGCTTCTGTCCATGTTGGGATTCAAGGAAGCCATCAAAGGATGGTGGTGGTGCAGCGTGGAAGGGAATaGGAGGATGGTAGAAATGAT | + |
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Preference number: 5 (lower is better) Translates to: LASVHVGIQGSHQRMVVVQRGRE*EDGRND Trigger: ATCATTTCTACCATCCTCCAATTCCCTTCCACGCTG...CACCACCACCATCCTTTGATGGCTTCCTTGAATCCCAACATGGACAGAAGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| CDS-3UTR CAA 90 bp | CAATTGCTTAGTTATTTCCATGTTCAGAATTTCCCTCCGAGTCCGTTATTCTTACAGCGTGGAAGGGAATaGGAGGATGGTAGAAATGAT | + |
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Preference number: 5 (lower is better) Translates to: QLLSYFHVQNFPPSPLFLQRGRE*EDGRND Trigger: ATCATTTCTACCATCCTCCAATTCCCTTCCACGCTG...TAAGAATAACGGACTCGGAGGGAAATTCTGAACATGGAAATAACTAAGCAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058609.5 ENSMUST00000209408.4 ENSMUST00000214156.2 |
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| CDS-3UTR CAA 90 bp | TTTCCATGTTCAGAATTTCCCTCCGAGTCCGTTATTCTTAGTTATTTGAGATATCAGCGTGGAAGGGAATaGGAGGATGGTAGAAATGAT | + |
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Preference number: 5 (lower is better) Translates to: FPCSEFPSESVILSYLRYQRGRE*EDGRND Trigger: ATCATTTCTACCATCCTCCAATTCCCTTCCACGCTG...ATATCTCAAATAACTAAGAATAACGGACTCGGAGGGAAATTCTGAACATGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058609.5 ENSMUST00000209408.4 ENSMUST00000214156.2 |
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