Pregenerated sensors for OLFR362 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075377Ensembl transcript IDs: ENSMUST00000100144.2, ENSMUST00000213817.2, ENSMUST00000215927.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCAGTGTAGAGGAATGCCAGGGCAGTGAGGTTCGAGTGAGTGGGTaGGAGGAGGAACATTCTCACAGAAGCAGGAGGATGGGGGATGGG | + |
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Preference number: 1 (lower is better) Translates to: SSVEECQGSEVRVSG*EEEHSHRSRRMGDG Trigger: CCCATCCCCCATCCTCCTGCTTCTGTGAGAATGTTCCTCCTCCCACCCACTCACTCGAACCTCACTGCCCTGGCATTCCTCTACACTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR TCA 90 bp | TTCTGTGAAGGCTCAGTTCTCCAGTGTAGAGGAATGCCAGGGCAGTaGGGTTCGAGTGAGTGGGTGGGAGGAGGAACATTCTCACAGAAG | + |
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Preference number: 1 (lower is better) Translates to: FCEGSVLQCRGMPGQ*GSSEWVGGGTFSQK Trigger: CTTCTGTGAGAATGTTCCTCCTCCCACCCACTCACTCGAACCTCACTGCCCTGGCATTCCTCTACACTGGAGAACTGAGCCTTCACAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR TCA 90 bp | CAGGAAAGCAAGAGGATACCAGAACCCAAAAGGGATGAGATTAGTTaGAATGCCAATCAAAGGGGAGGGAGAATCTGTAAAGACCATATC | + |
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Preference number: 1 (lower is better) Translates to: QESKRIPEPKRDEIS*NANQRGGRICKDHI Trigger: GATATGGTCTTTACAGATTCTCCCTCCCCTTTGATTGGCATTTCAACTAATCTCATCCCTTTTGGGTTCTGGTATCCTCTTGCTTTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR GCA 90 bp | TACCTGAAGACCCAGCTATACCACTCCTTCTCATATACCCAAATATaGTCCAACATATATCAAGGACACATGCTCCACTATGTTCATAGC | + |
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Preference number: 1 (lower is better) Translates to: YLKTQLYHSFSYTQI*SNIYQGHMLHYVHS Trigger: GCTATGAACATAGTGGAGCATGTGTCCTTGATATATGTTGGAGCATATTTGGGTATATGAGAAGGAGTGGTATAGCTGGGTCTTCAGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR CCA 90 bp | TTCTGGCAAGGATGTGGAGAAAGAGGAACACAACTCAATTGTTGGTaGGATTGCAAGTTGGTAAAATTACTCTGGAAATCAATCTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: FWQGCGERGTQLNCW*DCKLVKLLWKSIWQ Trigger: CTGCCAGATTGATTTCCAGAGTAATTTTACCAACTTGCAATCCCACCAACAATTGAGTTGTGTTCCTCTTTCTCCACATCCTTGCCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR TCA 90 bp | GAAATCAATCTGGCAGTTCCTCAGAAAATTGGACATAGTGTTACCTaGAGACCCAGCTATACCACTCCTTCTCATATACCCAAATATGCT | + |
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Preference number: 1 (lower is better) Translates to: EINLAVPQKIGHSVT*RPSYTTPSHIPKYA Trigger: AGCATATTTGGGTATATGAGAAGGAGTGGTATAGCTGGGTCTTCAGGTAACACTATGTCCAATTTTCTGAGGAACTGCCAGATTGATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR CCA 90 bp | AGATTCTGGCAAGGATGTGGAGAAAGAGGAACACAACTCAATTGTTaGTGGGATTGCAAGTTGGTAAAATTACTCTGGAAATCAATCTGG | + |
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Preference number: 1 (lower is better) Translates to: RFWQGCGERGTQLNC*WDCKLVKLLWKSIW Trigger: CCAGATTGATTTCCAGAGTAATTTTACCAACTTGCAATCCCACCAACAATTGAGTTGTGTTCCTCTTTCTCCACATCCTTGCCAGAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR TCA 90 bp | GATTTGCCAATTTATCATTGTCTGTGTGCACCTACACATGCTCTATaGAAGCTTGGCACATTAAGTGACACTATGAGTAATTCTATTGTG | + |
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Preference number: 1 (lower is better) Translates to: DLPIYHCLCAPTHAL*KLGTLSDTMSNSIV Trigger: CACAATAGAATTACTCATAGTGTCACTTAATGTGCCAAGCTTTCATAGAGCATGTGTAGGTGCACACAGACAATGATAAATTGGCAAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR CCA 90 bp | ACACAACTCAATTGTTGGTGGGATTGCAAGTTGGTAAAATTACTCTaGAAATCAATCTGGCAGTTCCTCAGAAAATTGGACATAGTGTTA | + |
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Preference number: 1 (lower is better) Translates to: TQLNCWWDCKLVKLL*KSIWQFLRKLDIVL Trigger: TAACACTATGTCCAATTTTCTGAGGAACTGCCAGATTGATTTCCAGAGTAATTTTACCAACTTGCAATCCCACCAACAATTGAGTTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR CCA 90 bp | GAAACAACCCAGATGTCCCTCAACAGAGGAATAGATACAGAAATGTaGAACATTTACACAATGGAGTTCTACTCAGCTATTAAAAACAAT | + |
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Preference number: 1 (lower is better) Translates to: ETTQMSLNRGIDTEM*NIYTMEFYSAIKNN Trigger: ATTGTTTTTAATAGCTGAGTAGAACTCCATTGTGTAAATGTTCCACATTTCTGTATCTATTCCTCTGTTGAGGGACATCTGGGTTGTTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR TCA 90 bp | AGAAGAAATGTAGAAATCAAACTTGAATTGCAAAGATCTGGAACTTaGCAATGTGTCCTGAGATGGATAGGGTACCTACAAAAGAGTATA | + |
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Preference number: 1 (lower is better) Translates to: RRNVEIKLELQRSGT*QCVLRWIGYLQKSI Trigger: TATACTCTTTTGTAGGTACCCTATCCATCTCAGGACACATTGTCAAGTTCCAGATCTTTGCAATTCAAGTTTGATTTCTACATTTCTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR GCA 90 bp | CCTTCTCATATACCCAAATATGCTCCAACATATATCAAGGACACATaGTCCACTATGTTCATAGCAACCTTATTTATAATAACCAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: PSHIPKYAPTYIKDT*STMFIATLFIITKS Trigger: GCTTTTGGTTATTATAAATAAGGTTGCTATGAACATAGTGGAGCATGTGTCCTTGATATATGTTGGAGCATATTTGGGTATATGAGAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTTAGAAGGGGGAACAAAATATTCACAGGAGTTAGAGGGTGAGAGGGACTTGGCAGTGAGGTTCGAGTaGGTGGGTGGGAGGAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: SLEGGTKYSQELEGERDLAVRFE*VGGRRN Trigger: GTTCCTCCTCCCACCCACTCACTCGAACCTCACTGC...CAAGTCCCTCTCACCCTCTAACTCCTGTGAATATTTTGTTCCCCCTTCTAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTGTGGAGCAATCTGGGATGGGGAACTGAGGGTAGCCACCAGCAAATCCCAGGAAGAGAAGTTTGTGTaGCTCGACAGTGCCATTTCA | + |
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Preference number: 2 (lower is better) Translates to: KCGAIWDGELRVATSKSQEEKFV*LDSAIS Trigger: TGAAATGGCACTGTCGAGGCACACAAACTTCTCTTC...CTGGGATTTGCTGGTGGCTACCCTCAGTTCCCCATCCCAGATTGCTCCACACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTGGGTGGGAGGAGGAACATTCTCACAGAAGCAGGAGGATGGGGGATGGGAATTATCATTGTCTGTGTaGACCTACACATGCTCTATG | + |
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Preference number: 2 (lower is better) Translates to: EWVGGGTFSQKQEDGGWELSLSV*TYTCSM Trigger: CATAGAGCATGTGTAGGTGCACACAGACAATGATAA...TTCCCATCCCCCATCCTCCTGCTTCTGTGAGAATGTTCCTCCTCCCACCCACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR CCA 90 bp | AATACCCAAGATACACTTCACAGACCATATGAAGCTCAAGAAGAAGAGAGACCAAGGTATAGCCCCAGGTaGGGGGATGGGACCACCCAC | + |
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Preference number: 2 (lower is better) Translates to: NTQDTLHRPYEAQEEERPRYSPR*GDGTTH Trigger: GTGGGTGGTCCCATCCCCCCACCTGGGGCTATACCT...TGGTCTCTCTTCTTCTTGAGCTTCATATGGTCTGTGAAGTGTATCTTGGGTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGAAAATTGGACATAGTGTTACCTGAAGACCCAGCTATACCACTCCTTCTCACAGGAGTTAGAGGGTaGGAGGGACTTGGGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LRKLDIVLPEDPAIPLLLTGVRG*EGLGRK Trigger: CTTCCTCCCAAGTCCCTCTCACCCTCTAACTCCTGT...GAGAAGGAGTGGTATAGCTGGGTCTTCAGGTAACACTATGTCCAATTTTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCAAATCAAAGCAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTGAGCCTATGAAGGAGATGTaGGTAAAGGAAGTCTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: MQIKATLRFHLTPVRMAEPMKEM*VKEVLP Trigger: TGGCAAGACTTCCTTTACTCACATCTCCTTCATAGG...CTCAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGCTTTGATTTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGTAGCCACCAGCAAATCCCAGATGCCAGGAAAGCAAGAGGATACCAGAACCTCCCAACATACTGTGTaGAAAATTGCTGAAAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: RVATSKSQMPGKQEDTRTSQHTV*KIAESR Trigger: TCTACTTTCAGCAATTTTTCACACAGTATGTTGGGA...GGTTCTGGTATCCTCTTGCTTTCCTGGCATCTGGGATTTGCTGGTGGCTACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGAAATGCCAATCAAAGGGGAGGGAGAATCTGTAAAGACCATATCCAGAGGTGTCTCTGCCAGAGCCTaGCAAATACAAAGGCAGATG | + |
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Preference number: 2 (lower is better) Translates to: VEMPIKGEGESVKTISRGVSARA*QIQRQM Trigger: CATCTGCCTTTGTATTTGTCAGGCTCTGGCAGAGAC...ACCTCTGGATATGGTCTTTACAGATTCTCCCTCCCCTTTGATTGGCATTTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCAAATCAAAGCAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTGAGAAATACAAAGGCAGATaGTTGCAGCCAACCATTGGA | + |
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Preference number: 2 (lower is better) Translates to: MQIKATLRFHLTPVRMAEKYKGR*LQPTIG Trigger: TCCAATGGTTGGCTGCAAGCATCTGCCTTTGTATTT...CTCAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGCTTTGATTTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTTAGAAGGGGGAACAAAATATTCACAGGAGTTAGAGGGTGAGAGGGACTTGAACACACTATTAACATaGGCCAAGTTAGGAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SLEGGTKYSQELEGERDLNTLLT*AKLGAA Trigger: AGCTGCTCCTAACTTGGCTCATGTTAATAGTGTGTT...CAAGTCCCTCTCACCCTCTAACTCCTGTGAATATTTTGTTCCCCCTTCTAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGAAAATTGGACATAGTGTTACCTGAAGACCCAGCTATACCACTCCTTCTCCAAAGATCTGGAACTTaGCAATGTGTCCTGAGATGG | + |
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Preference number: 2 (lower is better) Translates to: LRKLDIVLPEDPAIPLLLQRSGT*QCVLRW Trigger: CCATCTCAGGACACATTGTCAAGTTCCAGATCTTTG...GAGAAGGAGTGGTATAGCTGGGTCTTCAGGTAACACTATGTCCAATTTTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCAAATCAAAGCAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTGAGAGAGAGACCAAAATATaGATGCTTCAGTCCTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: MQIKATLRFHLTPVRMAERETKI*MLQSSL Trigger: TAAGGAGGACTGAAGCATTCATATTTTGGTCTCTCT...CTCAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGCTTTGATTTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAAAATTGGACATAGTGTTACCTGAAGACCCAGCTATACCACTCCTTCTCATAGCTGAGAGTCTCTaGCAGAGCCTGACAAATACA | + |
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Preference number: 2 (lower is better) Translates to: LRKLDIVLPEDPAIPLLLIAESL*QSLTNT Trigger: TGTATTTGTCAGGCTCTGGCAGAGACTCTCAGCTAT...GAGAAGGAGTGGTATAGCTGGGTCTTCAGGTAACACTATGTCCAATTTTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR CCA 90 bp | AATACCCAAGATACACTTCACAGACCATATGAAGCTCAAGAAGAAGAGAGACCAAAGTGTGGAGCAATCTaGGATGGGGAACTGAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: NTQDTLHRPYEAQEEERPKCGAI*DGELRV Trigger: TACCCTCAGTTCCCCATCCCAGATTGCTCCACACTT...TGGTCTCTCTTCTTCTTGAGCTTCATATGGTCTGTGAAGTGTATCTTGGGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTGAGATAAAAAGACATAGGCCCAGGTGTGATGGCTaGGATATTTTATATATATGG | + |
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Preference number: 2 (lower is better) Translates to: TLRFHLTPVRMAEIKRHRPRCDG*DILYIW Trigger: CCATATATATAAAATATCTCAGCCATCACACCTGGG...CCTATGTCTTTTTATCTCAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR TCA 90 bp | AATACCCAAGATACACTTCACAGACCATATGAAGCTCAAGAAGAAGAGAGACCAGTGAAAGAACAGTGGTaGAGAGAAGTTTGTGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: NTQDTLHRPYEAQEEERPVKEQW*REVCVP Trigger: AGGCACACAAACTTCTCTTCACCACTGTTCTTTCAC...TGGTCTCTCTTCTTCTTGAGCTTCATATGGTCTGTGAAGTGTATCTTGGGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR TCA 90 bp | AAATTACTCTGGAAATCAATCTGGCAGTTCCTCAGAAAATTGGACATAGTGTTAAAGCCCTTGGTTCTGTaGAGGCTCAGTTCTCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: KLLWKSIWQFLRKLDIVLKPLVL*RLSSPV Trigger: CACTGGAGAACTGAGCCTTCACAGAACCAAGGGCTT...TAACACTATGTCCAATTTTCTGAGGAACTGCCAGATTGATTTCCAGAGTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCAAATCAAAGCAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTGAGAACTGTATTAAAAGGTaGCAAAGCTTTTGCCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: MQIKATLRFHLTPVRMAENCIKR*QSFCQF Trigger: AAACTGGCAAAAGCTTTGGCACCTTTTAATACAGTT...CTCAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGCTTTGATTTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR GCA 90 bp | AAATTACTCTGGAAATCAATCTGGCAGTTCCTCAGAAAATTGGACATAGTGTTATCCAGTGTAGAGGAATaGCAGGGCAGTGAGGTTCGA | + |
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Preference number: 2 (lower is better) Translates to: KLLWKSIWQFLRKLDIVLSSVEE*QGSEVR Trigger: TCGAACCTCACTGCCCTGGCATTCCTCTACACTGGA...TAACACTATGTCCAATTTTCTGAGGAACTGCCAGATTGATTTCCAGAGTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR CAA 90 bp | TTGGTAAAATTACTCTGGAAATCAATCTGGCAGTTCCTCAGAAAATaGGACATAGTGTTACCTGAAGACCCAGCTATACCACTCCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LVKLLWKSIWQFLRK*DIVLPEDPAIPLLL Trigger: GAGAAGGAGTGGTATAGCTGGGTCTTCAGGTAACACTATGTCCAATTTTCTGAGGAACTGCCAGATTGATTTCCAGAGTAATTTTACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGAAATGCCAATCAAAGGGGAGGGAGAATCTGTAAAGACCATATCCAGAGGTAGTTCTCTGACAAAATaGGGTAATATAGTCAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: VEMPIKGEGESVKTISRGSSLTK*GNIVSW Trigger: CCAACTGACTATATTACCTCATTTTGTCAGAGAACT...ACCTCTGGATATGGTCTTTACAGATTCTCCCTCCCCTTTGATTGGCATTTCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR CAA 90 bp | TGTGGAGAAAGAGGAACACAACTCAATTGTTGGTGGGATTGCAAGTaGGTAAAATTACTCTGGAAATCAATCTGGCAGTTCCTCAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: CGERGTQLNCWWDCK*VKLLWKSIWQFLRK Trigger: TTTTCTGAGGAACTGCCAGATTGATTTCCAGAGTAATTTTACCAACTTGCAATCCCACCAACAATTGAGTTGTGTTCCTCTTTCTCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR CAA 90 bp | CAGAAGATTCTGGCAAGGATGTGGAGAAAGAGGAACACAACTCAATaGTTGGTGGGATTGCAAGTTGGTAAAATTACTCTGGAAATCAAT | + |
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Preference number: 2 (lower is better) Translates to: QKILARMWRKRNTTQ*LVGLQVGKITLEIN Trigger: ATTGATTTCCAGAGTAATTTTACCAACTTGCAATCCCACCAACAATTGAGTTGTGTTCCTCTTTCTCCACATCCTTGCCAGAATCTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR GCA 90 bp | AAATTACTCTGGAAATCAATCTGGCAGTTCCTCAGAAAATTGGACATAGTGTTAGTGTGCACCTACACATaGTCTATGAAAGCTTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: KLLWKSIWQFLRKLDIVLVCTYT*SMKAWH Trigger: GTGCCAAGCTTTCATAGAGCATGTGTAGGTGCACAC...TAACACTATGTCCAATTTTCTGAGGAACTGCCAGATTGATTTCCAGAGTAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR GCA 90 bp | AAATTACTCTGGAAATCAATCTGGCAGTTCCTCAGAAAATTGGACATAGTGTTACCAGCAAATCCCAGATaGCAGGAAAGCAAGAGGATA | + |
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Preference number: 2 (lower is better) Translates to: KLLWKSIWQFLRKLDIVLPANPR*QESKRI Trigger: TATCCTCTTGCTTTCCTGGCATCTGGGATTTGCTGG...TAACACTATGTCCAATTTTCTGAGGAACTGCCAGATTGATTTCCAGAGTAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR CAA 90 bp | GCTTGCTCATTAACTAGAATAAGTAGTGGATTTGCCAATTTATCATaGTCTGTGTGCACCTACACATGCTCTATGAAAGCTTGGCACATT | + |
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Preference number: 2 (lower is better) Translates to: ACSLTRISSGFANLS*SVCTYTCSMKAWHI Trigger: AATGTGCCAAGCTTTCATAGAGCATGTGTAGGTGCACACAGACAATGATAAATTGGCAAATCCACTACTTATTCTAGTTAATGAGCAAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR TCA 90 bp | AAATTACTCTGGAAATCAATCTGGCAGTTCCTCAGAAAATTGGACATAGTGTTATCATCCTCCCTAAAATaGGCCATGATCAAAATCAGC | + |
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Preference number: 2 (lower is better) Translates to: KLLWKSIWQFLRKLDIVLSSSLK*AMIKIS Trigger: GCTGATTTTGATCATGGCTCATTTTAGGGAGGATGA...TAACACTATGTCCAATTTTCTGAGGAACTGCCAGATTGATTTCCAGAGTAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR GCA 90 bp | AAATTACTCTGGAAATCAATCTGGCAGTTCCTCAGAAAATTGGACATAGTGTTAAGGTGCCAAAGCTTTTaGCAGTTTCTAGCTACAAGA | + |
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Preference number: 2 (lower is better) Translates to: KLLWKSIWQFLRKLDIVLRCQSF*QFLATR Trigger: TCTTGTAGCTAGAAACTGGCAAAAGCTTTGGCACCT...TAACACTATGTCCAATTTTCTGAGGAACTGCCAGATTGATTTCCAGAGTAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR-3UTR TCA 90 bp | AAATTACTCTGGAAATCAATCTGGCAGTTCCTCAGAAAATTGGACATAGTGTTAGAGAGGAGATGGAAATaGTATACAGAGGTTCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: KLLWKSIWQFLRKLDIVLERRWK*YTEVQK Trigger: TTTCTGAACCTCTGTATATCATTTCCATCTCCTCTC...TAACACTATGTCCAATTTTCTGAGGAACTGCCAGATTGATTTCCAGAGTAATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR TCA 72 bp | GGCTCAGTTCTCCAGTGTAGAGGAATGCCAGGGCAGTaGGGTTCGAGTGAGTGGGTGGGAGGAGGAACATTC | + |
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Preference number: 3 (lower is better) Translates to: GSVLQCRGMPGQ*GSSEWVGGGTF Trigger: GAATGTTCCTCCTCCCACCCACTCACTCGAACCTCACTGCCCTGGCATTCCTCTACACTGGAGAACTGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR GCA 72 bp | GGTTCTGTGAAGGCTCAGTTCTCCAGTGTAGAGGAATaGCAGGGCAGTGAGGTTCGAGTGAGTGGGTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: GSVKAQFSSVEE*QGSEVRVSGWE Trigger: CTCCCACCCACTCACTCGAACCTCACTGCCCTGGCATTCCTCTACACTGGAGAACTGAGCCTTCACAGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR CCA 72 bp | GAGGAATGCCAGGGCAGTGAGGTTCGAGTGAGTGGGTaGGAGGAGGAACATTCTCACAGAAGCAGGAGGATG | + |
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Preference number: 3 (lower is better) Translates to: EECQGSEVRVSG*EEEHSHRSRRM Trigger: CATCCTCCTGCTTCTGTGAGAATGTTCCTCCTCCCACCCACTCACTCGAACCTCACTGCCCTGGCATTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR GCA 72 bp | CTCTGCCAGAGCCTGACAAATACAAAGGCAGATGCTTaGAGCCAACCATTGGACTTAGCATGGGGTCCCCAA | + |
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Preference number: 3 (lower is better) Translates to: LCQSLTNTKADA*SQPLDLAWGPQ Trigger: TTGGGGACCCCATGCTAAGTCCAATGGTTGGCTGCAAGCATCTGCCTTTGTATTTGTCAGGCTCTGGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR GCA 72 bp | GAGTCTCTGCCAGAGCCTGACAAATACAAAGGCAGATaGTTGCAGCCAACCATTGGACTTAGCATGGGGTCC | + |
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Preference number: 3 (lower is better) Translates to: ESLPEPDKYKGR*LQPTIGLSMGS Trigger: GGACCCCATGCTAAGTCCAATGGTTGGCTGCAAGCATCTGCCTTTGTATTTGTCAGGCTCTGGCAGAGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
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| 3UTR CCA 72 bp | AAGGCAGATGCTTGCAGCCAACCATTGGACTTAGCATaGGGTCCCCAATGGAGGAAGAGGTTTGTAACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: KADACSQPLDLA*GPQWRKRFVTP Trigger: TGGGGTTACAAACCTCTTCCTCCATTGGGGACCCCATGCTAAGTCCAATGGTTGGCTGCAAGCATCTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR CCA 72 bp | AGGATGGAACTGTCTGGCATCAGTCAGAGAAGCCCTTaGTTCTGTGAAGGCTCAGTTCTCCAGTGTAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RMELSGISQRSP*FCEGSVLQCRG Trigger: TCCTCTACACTGGAGAACTGAGCCTTCACAGAACCAAGGGCTTCTCTGACTGATGCCAGACAGTTCCATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR CCA 72 bp | AGACTGGAGGAAAGGCCATCCAAAGAATTCCCCACCTaGGGATCGAGCCAATATACAGGTACCAACCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: RLEERPSKEFPT*GSSQYTGTNPD Trigger: ATCTGGGTTGGTACCTGTATATTGGCTCGATCCCCAGGTGGGGAATTCTTTGGATGGCCTTTCCTCCAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCAAATCAAAGCAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTGAGAAGGTGCCAAAGCTTTaGCCAGTTTCTAGCTACAAG | + |
|
Preference number: 3 (lower is better) Translates to: MQIKATLRFHLTPVRMAEKVPKL*PVSSYK Trigger: CTTGTAGCTAGAAACTGGCAAAAGCTTTGGCACCTT...CTCAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGCTTTGATTTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCAAATCAAAGCAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTGAGGCAAAGATCTGGAACTaGACAATGTGTCCTGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: MQIKATLRFHLTPVRMAEAKIWN*TMCPEM Trigger: CATCTCAGGACACATTGTCAAGTTCCAGATCTTTGC...CTCAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGCTTTGATTTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTAGAAGGGGGAACAAAATATTCACAGGAGTTAGAGGGTGAGAGGGACTTGCCAACCCAGATACTATaGCAGATGCTAAGAAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SLEGGTKYSQELEGERDLPTQIL*QMLRSA Trigger: AGCACTTCTTAGCATCTGCAATAGTATCTGGGTTGG...CAAGTCCCTCTCACCCTCTAACTCCTGTGAATATTTTGTTCCCCCTTCTAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTGAGATAAAAAGACATAGGAACCCAGAAGGGCTCTaGTCTAAAATAAGTACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TLRFHLTPVRMAEIKRHRNPEGL*SKISTG Trigger: CCCAGTACTTATTTTAGACAAGAGCCCTTCTGGGTT...CCTATGTCTTTTTATCTCAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR TCA 72 bp | TCGGTAAGCTATTGCTTCCTCTCATCCTCCCTAAAATaGGCCATGATCAAAATCAGCCCAAGCCTGTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SVSYCFLSSSLK*AMIKISPSLFS Trigger: AGAGAACAGGCTTGGGCTGATTTTGATCATGGCTCATTTTAGGGAGGATGAGAGGAAGCAATAGCTTACCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR TCA 72 bp | CTGGCAGTTCCTCAGAAAATTGGACATAGTGTTACCTaGAGACCCAGCTATACCACTCCTTCTCATATACCC | + |
|
Preference number: 3 (lower is better) Translates to: LAVPQKIGHSVT*RPSYTTPSHIP Trigger: GGGTATATGAGAAGGAGTGGTATAGCTGGGTCTTCAGGTAACACTATGTCCAATTTTCTGAGGAACTGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTAGAAGGGGGAACAAAATATTCACAGGAGTTAGAGGGTGAGAGGGACTTGTTTGCCAATTTATCATaGTCTGTGTGCACCTACACA | + |
|
Preference number: 3 (lower is better) Translates to: SLEGGTKYSQELEGERDLFANLS*SVCTYT Trigger: TGTGTAGGTGCACACAGACAATGATAAATTGGCAAA...CAAGTCCCTCTCACCCTCTAACTCCTGTGAATATTTTGTTCCCCCTTCTAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR TCA 72 bp | GAGGAGATGGAAATGATATACAGAGGTTCAGAAATTTaGACAGAAGTGTGGAGCAATCTGGGATGGGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: EEMEMIYRGSEI*TEVWSNLGWGT Trigger: AGTTCCCCATCCCAGATTGCTCCACACTTCTGTTCAAATTTCTGAACCTCTGTATATCATTTCCATCTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR TCA 72 bp | AAAGGGGGCAGGATCATGTATGAGAGGAGATGGAAATaGTATACAGAGGTTCAGAAATTTGAACAGAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KGGRIMYERRWK*YTEVQKFEQKC Trigger: ACACTTCTGTTCAAATTTCTGAACCTCTGTATATCATTTCCATCTCCTCTCATACATGATCCTGCCCCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR GCA 72 bp | GGAGAAAGAGGAACACAACTCAATTGTTGGTGGGATTaGAAGTTGGTAAAATTACTCTGGAAATCAATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GERGTQLNCWWD*KLVKLLWKSIW Trigger: CCAGATTGATTTCCAGAGTAATTTTACCAACTTGCAATCCCACCAACAATTGAGTTGTGTTCCTCTTTCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATTACTCTGGAAATCAATCTGGCAGTTCCTCAGAAAATTGGACATAGTGTTAGAGATGAAGCCTTGCTaGAGCAGTGATCATGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: KLLWKSIWQFLRKLDIVLEMKPC*SSDHEL Trigger: AAGTTCATGATCACTGCTCAAGCAAGGCTTCATCTC...TAACACTATGTCCAATTTTCTGAGGAACTGCCAGATTGATTTCCAGAGTAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR CCA 72 bp | AATTGTTGGTGGGATTGCAAGTTGGTAAAATTACTCTaGAAATCAATCTGGCAGTTCCTCAGAAAATTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: NCWWDCKLVKLL*KSIWQFLRKLD Trigger: GTCCAATTTTCTGAGGAACTGCCAGATTGATTTCCAGAGTAATTTTACCAACTTGCAATCCCACCAACAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| CDS-3UTR CCA 90 bp | GAGTGGGTGGGAGGAGGAACATTCTCACAGAAGCAGGAGGATGGGGGATGGGAAAGCGGGCAGCAGGAATaGCTGGAGAATCAGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: EWVGGGTFSQKQEDGGWESGQQE*LENQMT Trigger: TGTCATCTGATTCTCCAGCCATTCCTGCTGCCCGCT...TTCCCATCCCCCATCCTCCTGCTTCTGTGAGAATGTTCCTCCTCCCACCCACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| CDS-3UTR TCA 90 bp | AAGTGTGGAGCAATCTGGGATGGGGAACTGAGGGTAGCCACCAGCAAATCCCAGGAATCAGATGACAGATaGACCAACAGCTGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KCGAIWDGELRVATSKSQESDDR*TNSCGR Trigger: CCTGCCACAGCTGTTGGTTCATCTGTCATCTGATTC...CTGGGATTTGCTGGTGGCTACCCTCAGTTCCCCATCCCAGATTGCTCCACACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| CDS-3UTR TCA 90 bp | AAGTGTGGAGCAATCTGGGATGGGGAACTGAGGGTAGCCACCAGCAAATCCCAGGGCTGGAGAATCAGATaGCAGATGAACCAACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KCGAIWDGELRVATSKSQGWRIR*QMNQQL Trigger: CAGCTGTTGGTTCATCTGTCATCTGATTCTCCAGCC...CTGGGATTTGCTGGTGGCTACCCTCAGTTCCCCATCCCAGATTGCTCCACACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| CDS-3UTR GCA 90 bp | ATGCAAATCAAAGCAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTGAGAGGTGGAGACTGCTCTaGGGCGACCAGCAGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MQIKATLRFHLTPVRMAERWRLL*GDQQLK Trigger: CTTCAGCTGCTGGTCGCCGCAGAGCAGTCTCCACCT...CTCAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGCTTTGATTTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR CAA 72 bp | TCTCTGCCAGAGCCTGACAAATACAAAGGCAGATGCTaGCAGCCAACCATTGGACTTAGCATGGGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLPEPDKYKGRC*QPTIGLSMGSP Trigger: TGGGGACCCCATGCTAAGTCCAATGGTTGGCTGCAAGCATCTGCCTTTGTATTTGTCAGGCTCTGGCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGAAAATTGGACATAGTGTTACCTGAAGACCCAGCTATACCACTCCTTCTCGGAAGCCAACCATGGTaGGGTGGGATCCACAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRKLDIVLPEDPAIPLLLGSQPW*GGIHRW Trigger: CCACCTGTGGATCCCACCTCACCATGGTTGGCTTCC...GAGAAGGAGTGGTATAGCTGGGTCTTCAGGTAACACTATGTCCAATTTTCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR CAA 72 bp | CTGACAAATACAAAGGCAGATGCTTGCAGCCAACCATaGGACTTAGCATGGGGTCCCCAATGGAGGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTNTKADACSQP*DLAWGPQWRKR Trigger: CCTCTTCCTCCATTGGGGACCCCATGCTAAGTCCAATGGTTGGCTGCAAGCATCTGCCTTTGTATTTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTAGAAGGGGGAACAAAATATTCACAGGAGTTAGAGGGTGAGAGGGACTTGACAGCTGTGGCAGGGTaGCTGTGGATAGTCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLEGGTKYSQELEGERDLTAVAG*LWIVPS Trigger: ACTTGGGACTATCCACAGTCACCCTGCCACAGCTGT...CAAGTCCCTCTCACCCTCTAACTCCTGTGAATATTTTGTTCCCCCTTCTAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| CDS-3UTR TCA 90 bp | AATACCCAAGATACACTTCACAGACCATATGAAGCTCAAGAAGAAGAGAGACCAGGGCACACCAGCCCTTaGGAACCCAAGGAGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NTQDTLHRPYEAQEEERPGHTSP*EPKEQE Trigger: TTCTTGCTCCTTGGGTTCTCAAGGGCTGGTGTGCCC...TGGTCTCTCTTCTTCTTGAGCTTCATATGGTCTGTGAAGTGTATCTTGGGTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTAGAAGGGGGAACAAAATATTCACAGGAGTTAGAGGGTGAGAGGGACTTGGAGATAATACATAGGTaGGTGGAGCCTGGAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLEGGTKYSQELEGERDLEIIHR*VEPGVP Trigger: TGGGACTCCAGGCTCCACTCACCTATGTATTATCTC...CAAGTCCCTCTCACCCTCTAACTCCTGTGAATATTTTGTTCCCCCTTCTAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| CDS-3UTR TCA 90 bp | GTTGAAATGCCAATCAAAGGGGAGGGAGAATCTGTAAAGACCATATCCAGAGGTATTCCGGGAGTTCTGTaGGGGAGGCTGGAAATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VEMPIKGEGESVKTISRGIPGVL*GRLEID Trigger: GTCTATTTCCAGCCTCCCTCACAGAACTCCCGGAAT...ACCTCTGGATATGGTCTTTACAGATTCTCCCTCCCCTTTGATTGGCATTTCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTGAGATAAAAAGACATAGGGTCCCAAGTCTATCATaGAGAGGCCACGCAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLRFHLTPVRMAEIKRHRVPSLS*RGHARD Trigger: ATCTCTTGCGTGGCCTCTCCATGATAGACTTGGGAC...CCTATGTCTTTTTATCTCAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTAGAAGGGGGAACAAAATATTCACAGGAGTTAGAGGGTGAGAGGGACTTGAGAGGCTCGCAGGAGTaGTCGGTGATCACAAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLEGGTKYSQELEGERDLRGSQE*SVITKE Trigger: TTCTTTTGTGATCACCGACCACTCCTGCGAGCCTCT...CAAGTCCCTCTCACCCTCTAACTCCTGTGAATATTTTGTTCCCCCTTCTAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| CDS-3UTR TCA 90 bp | AAATTACTCTGGAAATCAATCTGGCAGTTCCTCAGAAAATTGGACATAGTGTTAAACACAGTGGCAGGATaGGTCCCACATGCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KLLWKSIWQFLRKLDIVLNTVAG*VPHAAW Trigger: CCATGCTGCATGTGGGACTCATCCTGCCACTGTGTT...TAACACTATGTCCAATTTTCTGAGGAACTGCCAGATTGATTTCCAGAGTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR CAA 72 bp | CTGGCAAGGATGTGGAGAAAGAGGAACACAACTCAATaGTTGGTGGGATTGCAAGTTGGTAAAATTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LARMWRKRNTTQ*LVGLQVGKITL Trigger: CAGAGTAATTTTACCAACTTGCAATCCCACCAACAATTGAGTTGTGTTCCTCTTTCTCCACATCCTTGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| CDS-3UTR TCA 90 bp | TTATCTTCATATTCCTTAAAAACCCTGAATCAAAACAACCCAGGTGTGATGGCTGCAATCGTAAGATGGTaGTCCCAATTCGGGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSYSLKTLNQNNPGVMAAIVRW*SQFGHR Trigger: CCTATGCCCGAATTGGGATCACCATCTTACGATTGC...AGCCATCACACCTGGGTTGTTTTGATTCAGGGTTTTTAAGGAATATGAAGATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR CAA 72 bp | TTACTCTGGAAATCAATCTGGCAGTTCCTCAGAAAATaGGACATAGTGTTACCTGAAGACCCAGCTATACCA | + |
|
Preference number: 4 (lower is better) Translates to: LLWKSIWQFLRK*DIVLPEDPAIP Trigger: TGGTATAGCTGGGTCTTCAGGTAACACTATGTCCAATTTTCTGAGGAACTGCCAGATTGATTTCCAGAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR CAA 72 bp | GCAAGGATGTGGAGAAAGAGGAACACAACTCAATTGTaGGTGGGATTGCAAGTTGGTAAAATTACTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ARMWRKRNTTQL*VGLQVGKITLE Trigger: TTCCAGAGTAATTTTACCAACTTGCAATCCCACCAACAATTGAGTTGTGTTCCTCTTTCTCCACATCCTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| CDS-3UTR TCA 90 bp | AATACCCAAGATACACTTCACAGACCATATGAAGCTCAAGAAGAAGAGAGACCAAGCAGTGTACATTACTaGAGCCACCATGTCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: NTQDTLHRPYEAQEEERPSSVHY*SHHVLI Trigger: AATCAAGACATGGTGGCTTCAGTAATGTACACTGCT...TGGTCTCTCTTCTTCTTGAGCTTCATATGGTCTGTGAAGTGTATCTTGGGTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR CAA 72 bp | AGAGGAACACAACTCAATTGTTGGTGGGATTGCAAGTaGGTAAAATTACTCTGGAAATCAATCTGGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGTQLNCWWDCK*VKLLWKSIWQF Trigger: GAACTGCCAGATTGATTTCCAGAGTAATTTTACCAACTTGCAATCCCACCAACAATTGAGTTGTGTTCCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR CAA 72 bp | TGGAGAAAGAGGAACACAACTCAATTGTTGGTGGGATaGCAAGTTGGTAAAATTACTCTGGAAATCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: WRKRNTTQLLVG*QVGKITLEINL Trigger: CAGATTGATTTCCAGAGTAATTTTACCAACTTGCAATCCCACCAACAATTGAGTTGTGTTCCTCTTTCTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| 3UTR CAA 72 bp | TTAACTAGAATAAGTAGTGGATTTGCCAATTTATCATaGTCTGTGTGCACCTACACATGCTCTATGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTRISSGFANLS*SVCTYTCSMKA Trigger: AGCTTTCATAGAGCATGTGTAGGTGCACACAGACAATGATAAATTGGCAAATCCACTACTTATTCTAGTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| CDS GCA 90 bp | CCCCCAGCATCTCCAGCCCAACACAGTGGCAGGATGAGTCCCACATaGAGCATGGTGTGTACTATAGATACCACCCAGCTCAAGGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PPASPAQHSGRMSPT*SMVCTIDTTQLKAS Trigger: ACTGGCCTTGAGCTGGGTGGTATCTATAGTACACACCATGCTGCATGTGGGACTCATCCTGCCACTGTGTTGGGCTGGAGATGCTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100144.2 ENSMUST00000213817.2 ENSMUST00000215927.2 |
||
| CDS TCA 90 bp | GTCAAACAGCGGGCAGCAGGAATGGCTGGAGAATCAGATGACAGATaGACCAACAGCTGTGGCAGGGTGACTGTGGATAGTCCCAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VKQRAAGMAGESDDR*TNSCGRVTVDSPKS Trigger: AGACTTGGGACTATCCACAGTCACCCTGCCACAGCTGTTGGTTCATCTGTCATCTGATTCTCCAGCCATTCCTGCTGCCCGCTGTTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100144.2 ENSMUST00000213817.2 ENSMUST00000215927.2 |
||
| CDS TCA 90 bp | TGGCTGGAGAATCAGATGACAGATGAACCAACAGCTGTGGCAGGGTaGCTGTGGATAGTCCCAAGTCTATCATGGAGAGGCCACGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: WLENQMTDEPTAVAG*LWIVPSLSWRGHAR Trigger: TCTTGCGTGGCCTCTCCATGATAGACTTGGGACTATCCACAGTCACCCTGCCACAGCTGTTGGTTCATCTGTCATCTGATTCTCCAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100144.2 ENSMUST00000213817.2 ENSMUST00000215927.2 |
||
| CDS CCA 90 bp | GTGAGGAAGTTTAACATTGCCCCCAGCATCTCCAGCCCAACACAGTaGCAGGATGAGTCCCACATGCAGCATGGTGTGTACTATAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: VRKFNIAPSISSPTQ*QDESHMQHGVYYRY Trigger: GTATCTATAGTACACACCATGCTGCATGTGGGACTCATCCTGCCACTGTGTTGGGCTGGAGATGCTGGGGGCAATGTTAAACTTCCTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100144.2 ENSMUST00000213817.2 ENSMUST00000215927.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGAAAATTGGACATAGTGTTACCTGAAGACCCAGCTATACCACTCCTTCTCGGGGCACACCAGCCCTaGAGAACCCAAGGAGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LRKLDIVLPEDPAIPLLLGAHQP*RTQGAR Trigger: TCTTGCTCCTTGGGTTCTCAAGGGCTGGTGTGCCCC...GAGAAGGAGTGGTATAGCTGGGTCTTCAGGTAACACTATGTCCAATTTTCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| CDS TCA 90 bp | TCCCAAGTCTATCATGGAGAGGCCACGCAAGAGATAATACATAGGTaGGTGGAGCCTGGAGTCCCAAGAGATGAGCAGTACCAAAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SQVYHGEATQEIIHR*VEPGVPRDEQYQSH Trigger: GTGACTTTGGTACTGCTCATCTCTTGGGACTCCAGGCTCCACTCACCTATGTATTATCTCTTGCGTGGCCTCTCCATGATAGACTTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100144.2 ENSMUST00000213817.2 ENSMUST00000215927.2 |
||
| CDS-3UTR CAA 90 bp | AAGTGTGGAGCAATCTGGGATGGGGAACTGAGGGTAGCCACCAGCAAATCCCAGAATATAGCCAGCTCATaGGAATGTGTGTCAGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KCGAIWDGELRVATSKSQNIASS*ECVSEQ Trigger: TTGCTCTGACACACATTCCAATGAGCTGGCTATATT...CTGGGATTTGCTGGTGGCTACCCTCAGTTCCCCATCCCAGATTGCTCCACACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213817.2 |
||
| CDS TCA 72 bp | CAAACAGCGGGCAGCAGGAATGGCTGGAGAATCAGATaGCAGATGAACCAACAGCTGTGGCAGGGTGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: QTAGSRNGWRIR*QMNQQLWQGDC Trigger: ACAGTCACCCTGCCACAGCTGTTGGTTCATCTGTCATCTGATTCTCCAGCCATTCCTGCTGCCCGCTGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100144.2 ENSMUST00000213817.2 ENSMUST00000215927.2 |
||
| CDS GCA 72 bp | TCTCCAGCCCAACACAGTGGCAGGATGAGTCCCACATaGAGCATGGTGTGTACTATAGATACCACCCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SPAQHSGRMSPT*SMVCTIDTTQL Trigger: GAGCTGGGTGGTATCTATAGTACACACCATGCTGCATGTGGGACTCATCCTGCCACTGTGTTGGGCTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100144.2 ENSMUST00000213817.2 ENSMUST00000215927.2 |
||
| CDS CCA 72 bp | TTTAACATTGCCCCCAGCATCTCCAGCCCAACACAGTaGCAGGATGAGTCCCACATGCAGCATGGTGTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: FNIAPSISSPTQ*QDESHMQHGVY Trigger: GTACACACCATGCTGCATGTGGGACTCATCCTGCCACTGTGTTGGGCTGGAGATGCTGGGGGCAATGTTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100144.2 ENSMUST00000213817.2 ENSMUST00000215927.2 |
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| CDS CAA 72 bp | ATTAGAAAGCCACCCTCCAAGAATATAGCCAGCTCATaGGAATGTGTGTCAGAGCAAGAGGCTCGCAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: IRKPPSKNIASS*ECVSEQEARRS Trigger: ACTCCTGCGAGCCTCTTGCTCTGACACACATTCCAATGAGCTGGCTATATTCTTGGAGGGTGGCTTTCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100144.2 ENSMUST00000213817.2 ENSMUST00000215927.2 |
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