Pregenerated sensors for OLFR358 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075379Ensembl transcript IDs: ENSMUST00000100146.5, ENSMUST00000216437.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCTCAGTATCAGGACAGAATACTCCTCTACAGGTTATTGGTAAGTaGTGCTCCCAGAGGCATCCAAATCAACATAGGCTATGCCGTTGC | + |
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Preference number: 1 (lower is better) Translates to: TSVSGQNTPLQVIGK*CSQRHPNQHRLCRC Trigger: GCAACGGCATAGCCTATGTTGATTTGGATGCCTCTGGGAGCACCACTTACCAATAACCTGTAGAGGAGTATTCTGTCCTGATACTGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR TCA 90 bp | ACCTTGTCTCTATTGAACAATTGTAGGCACCTGAGAAATGATTCCTaGGGCTGTCCTCTGGCCTCCACATGTACACATACACACTCTCTA | + |
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Preference number: 1 (lower is better) Translates to: TLSLLNNCRHLRNDS*GCPLASTCTHTHSL Trigger: TAGAGAGTGTGTATGTGTACATGTGGAGGCCAGAGGACAGCCTCAGGAATCATTTCTCAGGTGCCTACAATTGTTCAATAGAGACAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR GCA 90 bp | ATTGGTAAGTGGTGCTCCCAGAGGCATCCAAATCAACATAGGCTATaGCGTTGCTATCAATTGTCTAGCATAATTATTGCTAAAGATACA | + |
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Preference number: 1 (lower is better) Translates to: IGKWCSQRHPNQHRL*RCYQLSSIIIAKDT Trigger: TGTATCTTTAGCAATAATTATGCTAGACAATTGATAGCAACGGCATAGCCTATGTTGATTTGGATGCCTCTGGGAGCACCACTTACCAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR TCA 90 bp | AAATGTTCAATTTGGCACAACTCTATACAAGGAACTACAAGCAACTaGATAAAGCTAGAAGCTGGAGAGATGGCCCTTTTAAGGAAGAAC | + |
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Preference number: 1 (lower is better) Translates to: KCSIWHNSIQGTTSN*IKLEAGEMALLRKN Trigger: GTTCTTCCTTAAAAGGGCCATCTCTCCAGCTTCTAGCTTTATTCAGTTGCTTGTAGTTCCTTGTATAGAGTTGTGCCAAATTGAACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR CCA 90 bp | CAACTCTATACAAGGAACTACAAGCAACTGAATAAAGCTAGAAGCTaGAGAGATGGCCCTTTTAAGGAAGAACATAATAAATGGTTGTTC | + |
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Preference number: 1 (lower is better) Translates to: QLYTRNYKQLNKARS*RDGPFKEEHNKWLF Trigger: GAACAACCATTTATTATGTTCTTCCTTAAAAGGGCCATCTCTCCAGCTTCTAGCTTTATTCAGTTGCTTGTAGTTCCTTGTATAGAGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCTCTACTCCCAACACACACAGACACACACACACACACACACACACACAGAGAATCAATAGCAAACTaGCCAAGAAAATCTCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: HSLLPTHTDTHTHTHTHRESIAN*PRKSPC Trigger: GCAGGGAGATTTTCTTGGTCAGTTTGCTATTGATTC...TCTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTTGGGAGTAGAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCTCTACTCCCAACACACACAGACACACACACACACACACACACACACAGATGTTTGCTACCATATTaGTCACTAATTCTCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: HSLLPTHTDTHTHTHTHRCLLPY*SLILWG Trigger: ACCCCAGAGAATTAGTGATCAATATGGTAGCAAACA...TCTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTTGGGAGTAGAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCTCTACTCCCAACACACACAGACACACACACACACACACACACACACAGATGTTATATGTCAGTTTaGCTTGATTCTGGAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: HSLLPTHTDTHTHTHTHRCYMSV*LDSGRQ Trigger: CTGTCTTCCAGAATCAAGTCAAACTGACATATAACA...TCTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTTGGGAGTAGAGAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAACACATTAAAAGCCAAATGTTCAATTTGGCACAACTCTATACAAGGAACAAGACAGAGATACCATaGTCAGCCAAACAACACTAC | + |
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Preference number: 2 (lower is better) Translates to: PEHIKSQMFNLAQLYTRNKTEIP*SAKQHY Trigger: GTAGTGTTGTTTGGCTGAGCATGGTATCTCTGTCTT...GTTCCTTGTATAGAGTTGTGCCAAATTGAACATTTGGCTTTTAATGTGTTCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR CAA 90 bp | ACCTGGTTTGAATCTCCAGAACACATTAAAAGCCAAATGTTCAATTaGGCACAACTCTATACAAGGAACTACAAGCAACTGAATAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: TWFESPEHIKSQMFN*AQLYTRNYKQLNKA Trigger: AGCTTTATTCAGTTGCTTGTAGTTCCTTGTATAGAGTTGTGCCAAATTGAACATTTGGCTTTTAATGTGTTCTGGAGATTCAAACCAGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGAACACATTAAAAGCCAAATGTTCAATTTGGCACAACTCTATACAAGGAACCATGTAGAACATAGATaGATCAATAGCAAACTGACC | + |
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Preference number: 2 (lower is better) Translates to: PEHIKSQMFNLAQLYTRNHVEHR*INSKLT Trigger: GGTCAGTTTGCTATTGATTCATCTATGTTCTACATG...GTTCCTTGTATAGAGTTGTGCCAAATTGAACATTTGGCTTTTAATGTGTTCTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGAACACATTAAAAGCCAAATGTTCAATTTGGCACAACTCTATACAAGGAACCATGAGCAAAAGATTTaGATGGCTGATCTTAATGCT | + |
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Preference number: 2 (lower is better) Translates to: PEHIKSQMFNLAQLYTRNHEQKI*MADLNA Trigger: AGCATTAAGATCAGCCATTCAAATCTTTTGCTCATG...GTTCCTTGTATAGAGTTGTGCCAAATTGAACATTTGGCTTTTAATGTGTTCTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAACACATTAAAAGCCAAATGTTCAATTTGGCACAACTCTATACAAGGAACTCCTACTTTGTGGTGTaGAAACCAATGAAAAACCTT | + |
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Preference number: 2 (lower is better) Translates to: PEHIKSQMFNLAQLYTRNSYFVV*KPMKNL Trigger: AAGGTTTTTCATTGGTTTGCACACCACAAAGTAGGA...GTTCCTTGTATAGAGTTGTGCCAAATTGAACATTTGGCTTTTAATGTGTTCTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGAACACATTAAAAGCCAAATGTTCAATTTGGCACAACTCTATACAAGGAACAGCAAAAGATTTGAATaGCTGATCTTAATGCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: PEHIKSQMFNLAQLYTRNSKRFE*LILMLS Trigger: GCTCAGCATTAAGATCAGCCATTCAAATCTTTTGCT...GTTCCTTGTATAGAGTTGTGCCAAATTGAACATTTGGCTTTTAATGTGTTCTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGAACACATTAAAAGCCAAATGTTCAATTTGGCACAACTCTATACAAGGAACTTGTTCAGTGCCAAGTaGTCAACCTTAAAAACATAC | + |
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Preference number: 2 (lower is better) Translates to: PEHIKSQMFNLAQLYTRNLFSAK*STLKTY Trigger: GTATGTTTTTAAGGTTGACCACTTGGCACTGAACAA...GTTCCTTGTATAGAGTTGTGCCAAATTGAACATTTGGCTTTTAATGTGTTCTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAACACATTAAAAGCCAAATGTTCAATTTGGCACAACTCTATACAAGGAACTAATAAAGCTAGAAGCTaGAGAGATGGCCCTTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: QNTLKAKCSIWHNSIQGTNKARS*RDGPFK Trigger: CTTAAAAGGGCCATCTCTCCAGCTTCTAGCTTTATT...AGTTCCTTGTATAGAGTTGTGCCAAATTGAACATTTGGCTTTTAATGTGTTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTTCAATTTGGCACAACTCTATACAAGGAACTACAAGCAACTGAATAAAGCTTATGTCAGTTTGACTTaGTTCTGGAAGACAGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: MFNLAQLYTRNYKQLNKAYVSLT*FWKTVR Trigger: TCTTACTGTCTTCCAGAATCAAGTCAAACTGACATA...AGCTTTATTCAGTTGCTTGTAGTTCCTTGTATAGAGTTGTGCCAAATTGAACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTTCAATTTGGCACAACTCTATACAAGGAACTACAAGCAACTGAATAAAGCTACAGATTTAAATCAGTaGTTAGAGTACTCACCTACT | + |
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Preference number: 2 (lower is better) Translates to: MFNLAQLYTRNYKQLNKATDLNQ*LEYSPT Trigger: AGTAGGTGAGTACTCTAACCACTGATTTAAATCTGT...AGCTTTATTCAGTTGCTTGTAGTTCCTTGTATAGAGTTGTGCCAAATTGAACAT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR CCA 72 bp | TCAGGACAGAATACTCCTCTACAGGTTATTGGTAAGTaGTGCTCCCAGAGGCATCCAAATCAACATAGGCTA | + |
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Preference number: 3 (lower is better) Translates to: SGQNTPLQVIGK*CSQRHPNQHRL Trigger: TAGCCTATGTTGATTTGGATGCCTCTGGGAGCACCACTTACCAATAACCTGTAGAGGAGTATTCTGTCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR-3UTR CAA 90 bp | CACTCTCTACTCCCAACACACACAGACACACACACACACACACACACACACAGAATATGTCAGTTTGACTaGATTCTGGAAGACAGTAAG | + |
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Preference number: 3 (lower is better) Translates to: HSLLPTHTDTHTHTHTHRICQFD*ILEDSK Trigger: CTTACTGTCTTCCAGAATCAAGTCAAACTGACATAT...TCTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTTGGGAGTAGAGAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR TCA 72 bp | AGCAGTTGCTTAGAGAGGGAACATGAGCAAAAGATTTaGATGGCTGATCTTAATGCTGAGCAGGATGAATTA | + |
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Preference number: 3 (lower is better) Translates to: SSCLEREHEQKI*MADLNAEQDEL Trigger: TAATTCATCCTGCTCAGCATTAAGATCAGCCATTCAAATCTTTTGCTCATGTTCCCTCTCTAAGCAACTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR TCA 72 bp | ATTTGGCACAACTCTATACAAGGAACTACAAGCAACTaGATAAAGCTAGAAGCTGGAGAGATGGCCCTTTTA | + |
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Preference number: 3 (lower is better) Translates to: IWHNSIQGTTSN*IKLEAGEMALL Trigger: TAAAAGGGCCATCTCTCCAGCTTCTAGCTTTATTCAGTTGCTTGTAGTTCCTTGTATAGAGTTGTGCCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR TCA 72 bp | TTCCATCCAACACACTGTGAGTATTGTGGTCTAAATTaGGATTGTAGAGAAAGGGAAACATTAGTGGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: FHPTHCEYCGLN*DCRERETLVEQ Trigger: TTGCTCCACTAATGTTTCCCTTTCTCTACAATCTCAATTTAGACCACAATACTCACAGTGTGTTGGATGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR GCA 72 bp | TCCCAGAGGCATCCAAATCAACATAGGCTATGCCGTTaGTATCAATTGTCTAGCATAATTATTGCTAAAGAT | + |
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Preference number: 3 (lower is better) Translates to: SQRHPNQHRLCR*YQLSSIIIAKD Trigger: ATCTTTAGCAATAATTATGCTAGACAATTGATAGCAACGGCATAGCCTATGTTGATTTGGATGCCTCTGGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR CCA 72 bp | TGGAGAGATGGCCCTTTTAAGGAAGAACATAATAAATaGTTGTTCAGTGCCAAGTGGTCAACCTTAAAAACA | + |
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Preference number: 3 (lower is better) Translates to: WRDGPFKEEHNK*LFSAKWSTLKT Trigger: TGTTTTTAAGGTTGACCACTTGGCACTGAACAACCATTTATTATGTTCTTCCTTAAAAGGGCCATCTCTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGAACACATTAAAAGCCAAATGTTCAATTTGGCACAACTCTATACAAGGAACTTGTTTGCTACCATATaGATCACTAATTCTCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: PEHIKSQMFNLAQLYTRNLFATI*ITNSLG Trigger: CCCCAGAGAATTAGTGATCAATATGGTAGCAAACAA...GTTCCTTGTATAGAGTTGTGCCAAATTGAACATTTGGCTTTTAATGTGTTCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR CCA 72 bp | ACAAGGAACTACAAGCAACTGAATAAAGCTAGAAGCTaGAGAGATGGCCCTTTTAAGGAAGAACATAATAAA | + |
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Preference number: 3 (lower is better) Translates to: TRNYKQLNKARS*RDGPFKEEHNK Trigger: TTTATTATGTTCTTCCTTAAAAGGGCCATCTCTCCAGCTTCTAGCTTTATTCAGTTGCTTGTAGTTCCTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR CCA 72 bp | GTCCATTCAGTAAAGTATGTTACAAATATGAGGACCTaGTTTGAATCTCCAGAACACATTAAAAGCCAAATG | + |
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Preference number: 3 (lower is better) Translates to: VHSVKYVTNMRT*FESPEHIKSQM Trigger: CATTTGGCTTTTAATGTGTTCTGGAGATTCAAACCAGGTCCTCATATTTGTAACATACTTTACTGAATGGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| CDS-3UTR TCA 90 bp | CACTCTCTACTCCCAACACACACAGACACACACACACACACACACACACACAGACACAGAAGAAGTGGGTaGCCTGGTTGCCACAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: HSLLPTHTDTHTHTHTHRHRRSG*PGCHRR Trigger: CCTTCTGTGGCAACCAGGTCACCCACTTCTTCTGTG...TCTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTTGGGAGTAGAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| CDS-3UTR CCA 90 bp | CACTCTCTACTCCCAACACACACAGACACACACACACACACACACACACACAGAATGGCAGCCAGTAAGTaGCCTTCCATGCTGCCCACT | + |
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Preference number: 4 (lower is better) Translates to: HSLLPTHTDTHTHTHTHRMAASK*PSMLPT Trigger: AGTGGGCAGCATGGAAGGCCACTTACTGGCTGCCAT...TCTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTTGGGAGTAGAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| CDS-3UTR CCA 90 bp | CACTCTCTACTCCCAACACACACAGACACACACACACACACACACACACACAGAAGCGGTCATATGCCATaGCAGCCAGTAAGTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: HSLLPTHTDTHTHTHTHRSGHMP*QPVSGL Trigger: AAGGCCACTTACTGGCTGCCATGGCATATGACCGCT...TCTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTTGGGAGTAGAGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| CDS-3UTR CCA 90 bp | CAGAATACTCCTCTACAGGTTATTGGTAAGTGGTGCTCCCAGAGGCATCCAAATTGGGGGTCTGAAGCCTaGGGTCTGAGCAAGCAACAA | + |
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Preference number: 4 (lower is better) Translates to: QNTPLQVIGKWCSQRHPNWGSEA*GLSKQQ Trigger: TTGTTGCTTGCTCAGACCCCAGGCTTCAGACCCCCA...ATTTGGATGCCTCTGGGAGCACCACTTACCAATAACCTGTAGAGGAGTATTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| CDS-3UTR TCA 90 bp | CACTCTCTACTCCCAACACACACAGACACACACACACACACACACACACACAGAAACCTGGAAGCTTCCTaGGATGCAGAGTTTCCTAAG | + |
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Preference number: 4 (lower is better) Translates to: HSLLPTHTDTHTHTHTHRNLEAS*DAEFPK Trigger: CTTAGGAAACTCTGCATCTCAGGAAGCTTCCAGGTT...TCTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTTGGGAGTAGAGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| CDS-3UTR TCA 90 bp | CAGAACACATTAAAAGCCAAATGTTCAATTTGGCACAACTCTATACAAGGAACTGCTCAGGGCAGCAGTTaGATGCATGTGGGCAATAAC | + |
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Preference number: 4 (lower is better) Translates to: QNTLKAKCSIWHNSIQGTAQGSS*MHVGNN Trigger: GTTATTGCCCACATGCATTCAACTGCTGCCCTGAGC...AGTTCCTTGTATAGAGTTGTGCCAAATTGAACATTTGGCTTTTAATGTGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| CDS-3UTR GCA 90 bp | CCAGAACACATTAAAAGCCAAATGTTCAATTTGGCACAACTCTATACAAGGAACCCAAAAATAACTGGCTaGATCTCTGGCCTACTGGAC | + |
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Preference number: 4 (lower is better) Translates to: PEHIKSQMFNLAQLYTRNPKITG*ISGLLD Trigger: GTCCAGTAGGCCAGAGATGCAGCCAGTTATTTTTGG...GTTCCTTGTATAGAGTTGTGCCAAATTGAACATTTGGCTTTTAATGTGTTCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| CDS-3UTR TCA 90 bp | CCAGAACACATTAAAAGCCAAATGTTCAATTTGGCACAACTCTATACAAGGAACCATTCTTTCTTTATCTaGGCCAACCTGGAAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PEHIKSQMFNLAQLYTRNHSFFI*ANLEAS Trigger: GGAAGCTTCCAGGTTGGCTCAGATAAAGAAAGAATG...GTTCCTTGTATAGAGTTGTGCCAAATTGAACATTTGGCTTTTAATGTGTTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| CDS-3UTR GCA 90 bp | GAATCTCCAGAACACATTAAAAGCCAAATGTTCAATTTGGCACAACTCTATACAGCACTAGTAAGGTATTaGCCAAAACTGCTGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: ESPEHIKSQMFNLAQLYTALVRY*PKLLPG Trigger: ACCTGGCAGCAGTTTTGGGCAATACCTTACTAGTGC...TGTATAGAGTTGTGCCAAATTGAACATTTGGCTTTTAATGTGTTCTGGAGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| CDS-3UTR CCA 90 bp | GAATCTCCAGAACACATTAAAAGCCAAATGTTCAATTTGGCACAACTCTATACAAACTCCAAAAATAACTaGCTGCATCTCTGGCCTACT | + |
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Preference number: 4 (lower is better) Translates to: ESPEHIKSQMFNLAQLYTNSKNN*LHLWPT Trigger: AGTAGGCCAGAGATGCAGCCAGTTATTTTTGGAGTT...TGTATAGAGTTGTGCCAAATTGAACATTTGGCTTTTAATGTGTTCTGGAGATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR CAA 72 bp | GAATCTCCAGAACACATTAAAAGCCAAATGTTCAATTaGGCACAACTCTATACAAGGAACTACAAGCAACTG | + |
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Preference number: 4 (lower is better) Translates to: ESPEHIKSQMFN*AQLYTRNYKQL Trigger: CAGTTGCTTGTAGTTCCTTGTATAGAGTTGTGCCAAATTGAACATTTGGCTTTTAATGTGTTCTGGAGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR CAA 72 bp | CATCCAAATCAACATAGGCTATGCCGTTGCTATCAATaGTCTAGCATAATTATTGCTAAAGATACAGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: HPNQHRLCRCYQ*SSIIIAKDTVH Trigger: GTGAACTGTATCTTTAGCAATAATTATGCTAGACAATTGATAGCAACGGCATAGCCTATGTTGATTTGGATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| 3UTR CAA 72 bp | GACAGTAAGACACATGACTATGAAAAAGATCGATTTTaGCAAGCCATATTGTTTGCTACCATATTGATCACT | + |
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Preference number: 4 (lower is better) Translates to: DSKTHDYEKDRF*QAILFATILIT Trigger: AGTGATCAATATGGTAGCAAACAATATGGCTTGCAAAAATCGATCTTTTTCATAGTCATGTGTCTTACTGTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| CDS CCA 90 bp | CTGACCACCACCCATGAGGTCAATGTTATTCGCAGACAGAGGCTATaGCTGACAATAGCAGAGTATCTTAAAGGGTCACAGATGGCAACA | + |
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Preference number: 5 (lower is better) Translates to: LTTTHEVNVIRRQRL*LTIAEYLKGSQMAT Trigger: TGTTGCCATCTGTGACCCTTTAAGATACTCTGCTATTGTCAGCCATAGCCTCTGTCTGCGAATAACATTGACCTCATGGGTGGTGGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100146.5 ENSMUST00000216437.2 |
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| CDS CCA 90 bp | CAGGTACATGATAAGGACAACTCCAAAAATAACTGGCTGCATCTCTaGCCTACTGGACAATCCCAACAACACAAACTCAGTCACTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: QVHDKDNSKNNWLHL*PTGQSQQHKLSHFC Trigger: ACAGAAGTGACTGAGTTTGTGTTGTTGGGATTGTCCAGTAGGCCAGAGATGCAGCCAGTTATTTTTGGAGTTGTCCTTATCATGTACCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100146.5 ENSMUST00000216437.2 |
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| CDS-3UTR CAA 90 bp | ATGTTCAATTTGGCACAACTCTATACAAGGAACTACAAGCAACTGAATAAAGCTCAGGTAGACAGAGCTTaGCTCAGGGCAGCAGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: MFNLAQLYTRNYKQLNKAQVDRA*LRAAVE Trigger: TTCAACTGCTGCCCTGAGCAAAGCTCTGTCTACCTG...AGCTTTATTCAGTTGCTTGTAGTTCCTTGTATAGAGTTGTGCCAAATTGAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216437.2 |
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| CDS CCA 90 bp | TTAGGTCTCATAATATTTGTCATTCTTTCTTTATCTGAGCCAACCTaGAAGCTTCCTGAGATGCAGAGTTTCCTAAGAAGCCGTGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: LGLIIFVILSLSEPT*KLPEMQSFLRSRVR Trigger: TCTCACACGGCTTCTTAGGAAACTCTGCATCTCAGGAAGCTTCCAGGTTGGCTCAGATAAAGAAAGAATGACAAATATTATGAGACCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100146.5 ENSMUST00000216437.2 |
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| CDS CAA 72 bp | CTGGGGTCTGAGCAAGCAACAAGCACTAGTAAGGTATaGCCCAAAACTGCTGCCAGGTACATGATAAGGACA | + |
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Preference number: 6 (lower is better) Translates to: LGSEQATSTSKV*PKTAARYMIRT Trigger: TGTCCTTATCATGTACCTGGCAGCAGTTTTGGGCAATACCTTACTAGTGCTTGTTGCTTGCTCAGACCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100146.5 ENSMUST00000216437.2 |
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| CDS CAA 90 bp | GGGCTGACAACCACAGCTACACCCTCAGTGAAAATTAACATTTCATaGACCACTGGTCGAGTACAAGAGAGCTTCAGCAGAGGAGTGATG | + |
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Preference number: 6 (lower is better) Translates to: GLTTTATPSVKINIS*TTGRVQESFSRGVM Trigger: CATCACTCCTCTGCTGAAGCTCTCTTGTACTCGACCAGTGGTCAATGAAATGTTAATTTTCACTGAGGGTGTAGCTGTGGTTGTCAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100146.5 ENSMUST00000216437.2 |
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| CDS CCA 72 bp | ACCCATGAGGTCAATGTTATTCGCAGACAGAGGCTATaGCTGACAATAGCAGAGTATCTTAAAGGGTCACAG | + |
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Preference number: 6 (lower is better) Translates to: THEVNVIRRQRL*LTIAEYLKGSQ Trigger: CTGTGACCCTTTAAGATACTCTGCTATTGTCAGCCATAGCCTCTGTCTGCGAATAACATTGACCTCATGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100146.5 ENSMUST00000216437.2 |
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| CDS CCA 72 bp | GATAAGGACAACTCCAAAAATAACTGGCTGCATCTCTaGCCTACTGGACAATCCCAACAACACAAACTCAGT | + |
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Preference number: 6 (lower is better) Translates to: DKDNSKNNWLHL*PTGQSQQHKLS Trigger: ACTGAGTTTGTGTTGTTGGGATTGTCCAGTAGGCCAGAGATGCAGCCAGTTATTTTTGGAGTTGTCCTTATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100146.5 ENSMUST00000216437.2 |
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| CDS CAA 72 bp | ACCACAGCTACACCCTCAGTGAAAATTAACATTTCATaGACCACTGGTCGAGTACAAGAGAGCTTCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: TTATPSVKINIS*TTGRVQESFSR Trigger: TCTGCTGAAGCTCTCTTGTACTCGACCAGTGGTCAATGAAATGTTAATTTTCACTGAGGGTGTAGCTGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100146.5 ENSMUST00000216437.2 |
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| CDS CCA 72 bp | ATAATATTTGTCATTCTTTCTTTATCTGAGCCAACCTaGAAGCTTCCTGAGATGCAGAGTTTCCTAAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: IIFVILSLSEPT*KLPEMQSFLRS Trigger: GCTTCTTAGGAAACTCTGCATCTCAGGAAGCTTCCAGGTTGGCTCAGATAAAGAAAGAATGACAAATATTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100146.5 ENSMUST00000216437.2 |
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