Pregenerated sensors for OLFR357 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055838Ensembl transcript IDs: ENSMUST00000069578.5, ENSMUST00000213218.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCTGTATGTGTTCCACCTCTGTCCTCTGGTCTGCTGTGTCTCTCTaGCTCTGCTTTGATCTCCTGCCTGTCTGGAAGTCCTACCCTTTT | + |
|
Preference number: 1 (lower is better) Translates to: FCMCSTSVLWSAVSL*LCFDLLPVWKSYPF Trigger: AAAAGGGTAGGACTTCCAGACAGGCAGGAGATCAAAGCAGAGGCAGAGAGACACAGCAGACCAGAGGACAGAGGTGGAACACATACAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR TCA 90 bp | GGTCTATATAATGAGATCCAGGACAGAGAGAGCTACAAAATTGTGTaGCCCTGTCTCATAAATAAAAGCAACGGAACACAAAGCATCAAC | + |
|
Preference number: 1 (lower is better) Translates to: GLYNEIQDRESYKIV*PCLINKSNGTQSIN Trigger: GTTGATGCTTTGTGTTCCGTTGCTTTTATTTATGAGACAGGGTCACACAATTTTGTAGCTCTCTCTGTCCTGGATCTCATTATATAGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR CCA 90 bp | ATTCCAAAAGATACAAGCACCAATATTTCCTTCATGGTATCTCCCTaGCACTTAGGAAATGTGAAAATGATCAATTCTTGGCTATCAGAT | + |
|
Preference number: 1 (lower is better) Translates to: IPKDTSTNISFMVSP*HLGNVKMINSWLSD Trigger: ATCTGATAGCCAAGAATTGATCATTTTCACATTTCCTAAGTGCCAGGGAGATACCATGAAGGAAATATTGGTGCTTGTATCTTTTGGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR-3UTR GCA 90 bp | GACTTATTTACCATTCTGTGTCTCCATGTGGTTCTTACTGGCTGCTTCCAGTTTTCTGCTGTGTCTCTCTaGCTCTGCTTTGATCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: DLFTILCLHVVLTGCFQFSAVSL*LCFDLL Trigger: CAGGAGATCAAAGCAGAGGCAGAGAGACACAGCAGA...AAACTGGAAGCAGCCAGTAAGAACCACATGGAGACACAGAATGGTAAATAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR CAA 90 bp | GCCAGAAATCAGAAGCAGCTAGATCTCTCTGAGACTGAGCTCAATTaGGTCTATATAATGAGATCCAGGACAGAGAGAGCTACAAAATTG | + |
|
Preference number: 2 (lower is better) Translates to: ARNQKQLDLSETELN*VYIMRSRTERATKL Trigger: CAATTTTGTAGCTCTCTCTGTCCTGGATCTCATTATATAGACCAAATTGAGCTCAGTCTCAGAGAGATCTAGCTGCTTCTGATTTCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGATCTGGCTTTGGAATTCATTCCCCATACTCAGCAAAACCAGCCAACAAATTCTGACATCCAGACCTTaGAAATGTATGAGCTCTATA | + |
|
Preference number: 2 (lower is better) Translates to: WIWLWNSFPILSKTSQQILTSRP*KCMSSI Trigger: TATAGAGCTCATACATTTTCAAGGTCTGGATGTCAG...AATTTGTTGGCTGGTTTTGCTGAGTATGGGGAATGAATTCCAAAGCCAGATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR-3UTR TCA 90 bp | GATCAAAAACTGATGTCACTAGAAAATAGCTCAGTGGTACAACACTTGCCTGGCTTCAGTCTCTGTGAATaGAACGTCTTGAGAAGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: DQKLMSLENSSVVQHLPGFSLCE*NVLRRL Trigger: TAACCTTCTCAAGACGTTTCATTCACAGAGACTGAA...GCCAGGCAAGTGTTGTACCACTGAGCTATTTTCTAGTGACATCAGTTTTTGATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGATCTGGCTTTGGAATTCATTCCCCATACTCAGCAAAACCAGCCAACAAATTTTCAGTTCTAGAAGTTaGATCTTGTGCACACTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: WIWLWNSFPILSKTSQQIFSSRS*ILCTLN Trigger: GTTTAGTGTGCACAAGATCCAACTTCTAGAACTGAA...AATTTGTTGGCTGGTTTTGCTGAGTATGGGGAATGAATTCCAAAGCCAGATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR-3UTR TCA 90 bp | ACACCAGAGTTAACTGATCAAAAACTGATGTCACTAGAAAATAGCTCAGTGGTAAATAGAAGTCTCATTTaGCAGTTTGGAGATTACAGC | + |
|
Preference number: 2 (lower is better) Translates to: TPELTDQKLMSLENSSVVNRSLI*QFGDYS Trigger: GCTGTAATCTCCAAACTGTCAAATGAGACTTCTATT...TACCACTGAGCTATTTTCTAGTGACATCAGTTTTTGATCAGTTAACTCTGGTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR-3UTR CCA 90 bp | ACACCAGAGTTAACTGATCAAAAACTGATGTCACTAGAAAATAGCTCAGTGGTAGGTACAAGGCATATATaGACAGATCTGACAATATAT | + |
|
Preference number: 2 (lower is better) Translates to: TPELTDQKLMSLENSSVVGTRHI*TDLTIY Trigger: ATATATTGTCAGATCTGTCCATATATGCCTTGTACC...TACCACTGAGCTATTTTCTAGTGACATCAGTTTTTGATCAGTTAACTCTGGTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR-3UTR CCA 90 bp | ACACCAGAGTTAACTGATCAAAAACTGATGTCACTAGAAAATAGCTCAGTGGTATGTAGACAGATACATTaGTCAGCCATGTTTACATTA | + |
|
Preference number: 2 (lower is better) Translates to: TPELTDQKLMSLENSSVVCRQIH*SAMFTL Trigger: TAATGTAAACATGGCTGACCAATGTATCTGTCTACA...TACCACTGAGCTATTTTCTAGTGACATCAGTTTTTGATCAGTTAACTCTGGTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR GCA 72 bp | TGTTCCACCTCTGTCCTCTGGTCTGCTGTGTCTCTCTaGCTCTGCTTTGATCTCCTGCCTGTCTGGAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: CSTSVLWSAVSL*LCFDLLPVWKS Trigger: GGACTTCCAGACAGGCAGGAGATCAAAGCAGAGGCAGAGAGACACAGCAGACCAGAGGACAGAGGTGGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR-3UTR CAA 90 bp | GATCAAAAACTGATGTCACTAGAAAATAGCTCAGTGGTACAACACTTGCCTGGCTTGCTCAGCATAGTCTaGGATTCTCTAGCCCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DQKLMSLENSSVVQHLPGLLSIV*DSLAQA Trigger: TGCCTGGGCTAGAGAATCCAAGACTATGCTGAGCAA...GCCAGGCAAGTGTTGTACCACTGAGCTATTTTCTAGTGACATCAGTTTTTGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR GCA 72 bp | GAAAATAGCTCAGTGGTACAACACTTGCCTGGCAAATaGAGTGGCCTGTGTTTGATCCTCAGCAAACCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ENSSVVQHLPGK*SGLCLILSKPK Trigger: TTTTGGTTTGCTGAGGATCAAACACAGGCCACTGCATTTGCCAGGCAAGTGTTGTACCACTGAGCTATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR TCA 72 bp | AGCATCAACAATATTTCTGTAAGGGGAGTGGCAGAATaGGAGGCAGATGAAAGTTTGGGTGGGAAAATCACA | + |
|
Preference number: 3 (lower is better) Translates to: SINNISVRGVAE*EADESLGGKIT Trigger: TGTGATTTTCCCACCCAAACTTTCATCTGCCTCTCATTCTGCCACTCCCCTTACAGAAATATTGTTGATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR-3UTR CAA 90 bp | GACTTATTTACCATTCTGTGTCTCCATGTGGTTCTTACTGGCTGCTTCCAGTTTTTCAGATCTTTGGGATaGTGCCTAGTGACCATTGAT | + |
|
Preference number: 3 (lower is better) Translates to: DLFTILCLHVVLTGCFQFFRSLG*CLVTID Trigger: ATCAATGGTCACTAGGCACAATCCCAAAGATCTGAA...AAACTGGAAGCAGCCAGTAAGAACCACATGGAGACACAGAATGGTAAATAAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR-3UTR CAA 90 bp | GATCAAAAACTGATGTCACTAGAAAATAGCTCAGTGGTACAACACTTGCCTGGCCAGAGTCTAATTAAGTaGCTCAGCATAGTCTTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: DQKLMSLENSSVVQHLPGQSLIK*LSIVLD Trigger: ATCCAAGACTATGCTGAGCAACTTAATTAGACTCTG...GCCAGGCAAGTGTTGTACCACTGAGCTATTTTCTAGTGACATCAGTTTTTGATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGATCTGGCTTTGGAATTCATTCCCCATACTCAGCAAAACCAGCCAACAAATTTCTGACATCCAGACCTaGAAAATGTATGAGCTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: WIWLWNSFPILSKTSQQISDIQT*KMYELY Trigger: ATAGAGCTCATACATTTTCAAGGTCTGGATGTCAGA...AATTTGTTGGCTGGTTTTGCTGAGTATGGGGAATGAATTCCAAAGCCAGATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR-3UTR CAA 90 bp | GATCAAAAACTGATGTCACTAGAAAATAGCTCAGTGGTACAACACTTGCCTGGCATGAGGGAAGCTGGGTaGATTTATTTGTTCTTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: DQKLMSLENSSVVQHLPGMREAG*IYLFFQ Trigger: TTGAAAGAACAAATAAATCAACCCAGCTTCCCTCAT...GCCAGGCAAGTGTTGTACCACTGAGCTATTTTCTAGTGACATCAGTTTTTGATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR-3UTR CAA 90 bp | GACTTATTTACCATTCTGTGTCTCCATGTGGTTCTTACTGGCTGCTTCCAGTTTGCTCTTAGCTTTCTGTaGCTACAGAAATCAACAATT | + |
|
Preference number: 3 (lower is better) Translates to: DLFTILCLHVVLTGCFQFALSFL*LQKSTI Trigger: AATTGTTGATTTCTGTAGCAACAGAAAGCTAAGAGC...AAACTGGAAGCAGCCAGTAAGAACCACATGGAGACACAGAATGGTAAATAAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR TCA 72 bp | ATAGTTCAGTGCTCATTGTTCAGAGATGGAATGACATaGTGTCCAACCCCTGATGTAAAGGACAAATTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: IVQCSLFRDGMT*CPTPDVKDKFS Trigger: TGAGAATTTGTCCTTTACATCAGGGGTTGGACATCATGTCATTCCATCTCTGAACAATGAGCACTGAACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR TCA 72 bp | AATGAGATCCAGGACAGAGAGAGCTACAAAATTGTGTaGCCCTGTCTCATAAATAAAAGCAACGGAACACAA | + |
|
Preference number: 3 (lower is better) Translates to: NEIQDRESYKIV*PCLINKSNGTQ Trigger: TTGTGTTCCGTTGCTTTTATTTATGAGACAGGGTCACACAATTTTGTAGCTCTCTCTGTCCTGGATCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR CCA 72 bp | TTCTTTCAATTTATACATATCAGGGTCTCCTTCGACTaGGAAGAACTCAGGAAGAACCAACAACCCTATGAT | + |
|
Preference number: 3 (lower is better) Translates to: FFQFIHIRVSFD*EELRKNQQPYD Trigger: ATCATAGGGTTGTTGGTTCTTCCTGAGTTCTTCCCAGTCGAAGGAGACCCTGATATGTATAAATTGAAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR TCA 72 bp | ATTGTTCAGAGATGGAATGACATGATGTCCAACCCCTaGTGTAAAGGACAAATTCTCAAGTCAGATCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: IVQRWNDMMSNP*CKGQILKSDHQ Trigger: TTGATGATCTGACTTGAGAATTTGTCCTTTACATCAGGGGTTGGACATCATGTCATTCCATCTCTGAACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR TCA 72 bp | ATGACAGTTATATCTCTGGAGATACCTACTCCTAACTaGGCAGAAGATGACATAGCTTATTTGTCCTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: MTVISLEIPTPN*AEDDIAYLSFH Trigger: ATGGAAGGACAAATAAGCTATGTCATCTTCTGCTCAGTTAGGAGTAGGTATCTCCAGAGATATAACTGTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR GCA 72 bp | CTGGTGGTTGGTATAGAAATGTCAATACTAAAATCCTaGCAGCTCTTAGCTTTCTGTTGCTACAGAAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: LVVGIEMSILKS*QLLAFCCYRNQ Trigger: TTGATTTCTGTAGCAACAGAAAGCTAAGAGCTGGCAGGATTTTAGTATTGACATTTCTATACCAACCACCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR CCA 72 bp | GATACAAGCACCAATATTTCCTTCATGGTATCTCCCTaGCACTTAGGAAATGTGAAAATGATCAATTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: DTSTNISFMVSP*HLGNVKMINSW Trigger: CCAAGAATTGATCATTTTCACATTTCCTAAGTGCCAGGGAGATACCATGAAGGAAATATTGGTGCTTGTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACCAGAGTTAACTGATCAAAAACTGATGTCACTAGAAAATAGCTCAGTGGTATCTAGAAGTTGGATCTaGTGCACACTAAACAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: TPELTDQKLMSLENSSVVSRSWI*CTLNKC Trigger: ACACTTGTTTAGTGTGCACAAGATCCAACTTCTAGA...TACCACTGAGCTATTTTCTAGTGACATCAGTTTTTGATCAGTTAACTCTGGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACCAGAGTTAACTGATCAAAAACTGATGTCACTAGAAAATAGCTCAGTGGTAGAAAATGATCAATTCTaGGCTATCAGATGGGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: TPELTDQKLMSLENSSVVENDQF*AIRWAI Trigger: TATGGCCCATCTGATAGCCAAGAATTGATCATTTTC...TACCACTGAGCTATTTTCTAGTGACATCAGTTTTTGATCAGTTAACTCTGGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR TCA 72 bp | AAGTTGGATCTTGTGCACACTAAACAAGTGTCCTACTaGTTTATATATATATCCTTAGCCTCTCTCTTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: KLDLVHTKQVSY*FIYISLASLFY Trigger: GTAGAAGAGAGAGGCTAAGGATATATATATAAATCAGTAGGACACTTGTTTAGTGTGCACAAGATCCAACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR TCA 72 bp | TTAGAGTTAGTGGTACAAGGCATATATGGACAGATCTaGCAATATATAGTTTTCAGATCTTTGGGATTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LELVVQGIYGQI*QYIVFRSLGLC Trigger: GCACAATCCCAAAGATCTGAAAACTATATATTGTCAGATCTGTCCATATATGCCTTGTACCACTAACTCTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR TCA 72 bp | CTTCATAAATTTAGCTCCTCATCTCAGTGTCCTAACTaGTTGTATCTAATAGATGATGCTTTGTGTAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: LHKFSSSSQCPN*LYLIDDALCRQ Trigger: CTGTCTACACAAAGCATCATCTATTAGATACAATCAGTTAGGACACTGAGATGAGGAGCTAAATTTATGAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR CCA 72 bp | TATCTAATAGATGATGCTTTGTGTAGACAGATACATTaGTCAGCCATGTTTACATTATCTAGCATGTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: YLIDDALCRQIH*SAMFTLSSMSP Trigger: AGGAGACATGCTAGATAATGTAAACATGGCTGACCAATGTATCTGTCTACACAAAGCATCATCTATTAGATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| CDS-3UTR TCA 90 bp | TGGATCTGGCTTTGGAATTCATTCCCCATACTCAGCAAAACCAGCCAACAAATTGATCCGGAGGACTGCTaGGATGATGAAGGCATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WIWLWNSFPILSKTSQQIDPEDC*DDEGIG Trigger: TCCTATGCCTTCATCATCTCAGCAGTCCTCCGGATC...AATTTGTTGGCTGGTTTTGCTGAGTATGGGGAATGAATTCCAAAGCCAGATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| CDS-3UTR TCA 90 bp | ACACCAGAGTTAACTGATCAAAAACTGATGTCACTAGAAAATAGCTCAGTGGTAATATCAGTCTGCCCATaGGGAAGGTGTGCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TPELTDQKLMSLENSSVVISVCP*GRCAAG Trigger: CCCTGCTGCACACCTTCCTCATGGGCAGACTGATAT...TACCACTGAGCTATTTTCTAGTGACATCAGTTTTTGATCAGTTAACTCTGGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR CAA 72 bp | CAGAAGCAGCTAGATCTCTCTGAGACTGAGCTCAATTaGGTCTATATAATGAGATCCAGGACAGAGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QKQLDLSETELN*VYIMRSRTERA Trigger: AGCTCTCTCTGTCCTGGATCTCATTATATAGACCAAATTGAGCTCAGTCTCAGAGAGATCTAGCTGCTTCTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| CDS-3UTR TCA 90 bp | GGAAACGGATTAGTGAAGGGCAAAATGATTTTCTTAGTAAGATATGGAATGTTGATATCAGTCTGCCCATaGGGAAGGTGTGCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GNGLVKGKMIFLVRYGMLISVCP*GRCAAG Trigger: CCCTGCTGCACACCTTCCTCATGGGCAGACTGATAT...CAACATTCCATATCTTACTAAGAAAATCATTTTGCCCTTCACTAATCCGTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069578.5 ENSMUST00000213218.2 |
||
| CDS-3UTR TCA 90 bp | ACACCAGAGTTAACTGATCAAAAACTGATGTCACTAGAAAATAGCTCAGTGGTATCACCACTGTGTACATaGCTGTCACAATGCGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPELTDQKLMSLENSSVVSPLCT*LSQCGP Trigger: AGGGCCGCATTGTGACAGTCATGTACACAGTGGTGA...TACCACTGAGCTATTTTCTAGTGACATCAGTTTTTGATCAGTTAACTCTGGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| CDS-3UTR CCA 90 bp | GATCAAAAACTGATGTCACTAGAAAATAGCTCAGTGGTACAACACTTGCCTGGCAGGTCACAGAAGAAGTaGGGTATCCTGTTATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DQKLMSLENSSVVQHLPGRSQKK*GILLSA Trigger: TGCAGATAACAGGATACCCCACTTCTTCTGTGACCT...GCCAGGCAAGTGTTGTACCACTGAGCTATTTTCTAGTGACATCAGTTTTTGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| CDS-3UTR TCA 90 bp | GGAAACGGATTAGTGAAGGGCAAAATGATTTTCTTAGTAAGATATGGAATGTTGGATCCGGAGGACTGCTaGGATGATGAAGGCATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GNGLVKGKMIFLVRYGMLDPEDC*DDEGIG Trigger: TCCTATGCCTTCATCATCTCAGCAGTCCTCCGGATC...CAACATTCCATATCTTACTAAGAAAATCATTTTGCCCTTCACTAATCCGTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069578.5 ENSMUST00000213218.2 |
||
| CDS-3UTR TCA 90 bp | GGAAACGGATTAGTGAAGGGCAAAATGATTTTCTTAGTAAGATATGGAATGTTGTCACCACTGTGTACATaGCTGTCACAATGCGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GNGLVKGKMIFLVRYGMLSPLCT*LSQCGP Trigger: AGGGCCGCATTGTGACAGTCATGTACACAGTGGTGA...CAACATTCCATATCTTACTAAGAAAATCATTTTGCCCTTCACTAATCCGTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069578.5 ENSMUST00000213218.2 |
||
| CDS-3UTR CCA 90 bp | ACACCAGAGTTAACTGATCAAAAACTGATGTCACTAGAAAATAGCTCAGTGGTAATCTCCATTTTCCATTaGCAGAGGGGATCCGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TPELTDQKLMSLENSSVVISIFH*QRGSGG Trigger: TCCTCCGGATCCCCTCTGCCAATGGAAAATGGAGAT...TACCACTGAGCTATTTTCTAGTGACATCAGTTTTTGATCAGTTAACTCTGGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| 3UTR CAA 72 bp | GCAGAAGATGACATAGCTTATTTGTCCTTCCATGAGTaGACTGACACAAACAGCCACACAAAAGACACAACA | + |
|
Preference number: 4 (lower is better) Translates to: AEDDIAYLSFHE*TDTNSHTKDTT Trigger: TGTTGTGTCTTTTGTGTGGCTGTTTGTGTCAGTCAACTCATGGAAGGACAAATAAGCTATGTCATCTTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| CDS-3UTR CCA 90 bp | TGGATCTGGCTTTGGAATTCATTCCCCATACTCAGCAAAACCAGCCAACAAATTGAGGAAGATGTACATTaGAGTATGGAGATGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WIWLWNSFPILSKTSQQIEEDVH*SMEMRS Trigger: ACTTCTCATCTCCATACTCCAATGTACATCTTCCTC...AATTTGTTGGCTGGTTTTGCTGAGTATGGGGAATGAATTCCAAAGCCAGATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| CDS-3UTR CCA 90 bp | GGAAACGGATTAGTGAAGGGCAAAATGATTTTCTTAGTAAGATATGGAATGTTGATCTCCATTTTCCATTaGCAGAGGGGATCCGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GNGLVKGKMIFLVRYGMLISIFH*QRGSGG Trigger: TCCTCCGGATCCCCTCTGCCAATGGAAAATGGAGAT...CAACATTCCATATCTTACTAAGAAAATCATTTTGCCCTTCACTAATCCGTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000069578.5 ENSMUST00000213218.2 |
||
| CDS-3UTR CCA 90 bp | GGAAACGGATTAGTGAAGGGCAAAATGATTTTCTTAGTAAGATATGGAATGTTGATCAAGGTGTTGAGTTaGGTGCTGCTACAGGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GNGLVKGKMIFLVRYGMLIKVLS*VLLQEI Trigger: GATCTCCTGTAGCAGCACCCAACTCAACACCTTGAT...CAACATTCCATATCTTACTAAGAAAATCATTTTGCCCTTCACTAATCCGTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069578.5 ENSMUST00000213218.2 |
||
| 3UTR CAA 72 bp | ACCCCCATGCTTAGTTTTTATGTTGGTGCTGGAGATTaGAACAATAGACTATTCTCACTGTCTCTCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPMLSFYVGAGD*NNRLFSLSLHF Trigger: GAAATGGAGAGACAGTGAGAATAGTCTATTGTTCAAATCTCCAGCACCAACATAAAAACTAAGCATGGGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| CDS-3UTR TCA 90 bp | GGAAACGGATTAGTGAAGGGCAAAATGATTTTCTTAGTAAGATATGGAATGTTGTTCTCACCCACTTCCTaGAGGCTTCTTTTACATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GNGLVKGKMIFLVRYGMLFSPTS*RLLLHL Trigger: GAGATGTAAAAGAAGCCTTCAGGAAGTGGGTGAGAA...CAACATTCCATATCTTACTAAGAAAATCATTTTGCCCTTCACTAATCCGTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069578.5 ENSMUST00000213218.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAGAAGGTTAAGAATATGGAAATAGAAAAGAGTGGTGCATTTAATTCTGGGTTCTCACCCACTTCCTaGAGGCTTCTTTTACATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEKVKNMEIEKSGAFNSGFSPTS*RLLLHL Trigger: GAGATGTAAAAGAAGCCTTCAGGAAGTGGGTGAGAA...CCCAGAATTAAATGCACCACTCTTTTCTATTTCCATATTCTTAACCTTCTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| CDS-3UTR CCA 90 bp | GGAAACGGATTAGTGAAGGGCAAAATGATTTTCTTAGTAAGATATGGAATGTTGAGGTCACAGAAGAAGTaGGGTATCCTGTTATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GNGLVKGKMIFLVRYGMLRSQKK*GILLSA Trigger: TGCAGATAACAGGATACCCCACTTCTTCTGTGACCT...CAACATTCCATATCTTACTAAGAAAATCATTTTGCCCTTCACTAATCCGTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069578.5 ENSMUST00000213218.2 |
||
| 3UTR CAA 72 bp | GTTGGGGCTAATGGAATAGAAGTCTCATTTGACAGTTaGGAGATTACAGCAATATTCTCAGAAGTCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VGANGIEVSFDS*EITAIFSEVSF Trigger: GAATGAGACTTCTGAGAATATTGCTGTAATCTCCAAACTGTCAAATGAGACTTCTATTCCATTAGCCCCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| CDS-3UTR TCA 90 bp | GGAAACGGATTAGTGAAGGGCAAAATGATTTTCTTAGTAAGATATGGAATGTTGACCACAGGTAGAAAATaGTCTCCATTTTCCATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GNGLVKGKMIFLVRYGMLTTGRK*SPFSIG Trigger: GCCAATGGAAAATGGAGATCATTTTCTACCTGTGGT...CAACATTCCATATCTTACTAAGAAAATCATTTTGCCCTTCACTAATCCGTTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000069578.5 ENSMUST00000213218.2 |
||
| CDS-3UTR GCA 90 bp | GGAAACGGATTAGTGAAGGGCAAAATGATTTTCTTAGTAAGATATGGAATGTTGGGGTATCCTGTTATCTaGACAAAATATCAGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GNGLVKGKMIFLVRYGMLGYPVI*TKYQSA Trigger: GGCAGACTGATATTTTGTGCAGATAACAGGATACCC...CAACATTCCATATCTTACTAAGAAAATCATTTTGCCCTTCACTAATCCGTTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000069578.5 ENSMUST00000213218.2 |
||
| CDS-3UTR TCA 90 bp | GGAAACGGATTAGTGAAGGGCAAAATGATTTTCTTAGTAAGATATGGAATGTTGATCACTCCTTCTGTATaGATCATCAAGGTGTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GNGLVKGKMIFLVRYGMLITPSV*IIKVLS Trigger: ACTCAACACCTTGATGATTCATACAGAAGGAGTGAT...CAACATTCCATATCTTACTAAGAAAATCATTTTGCCCTTCACTAATCCGTTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069578.5 ENSMUST00000213218.2 |
||
| CDS-3UTR CCA 90 bp | GGAAACGGATTAGTGAAGGGCAAAATGATTTTCTTAGTAAGATATGGAATGTTGGAGGAAGATGTACATTaGAGTATGGAGATGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GNGLVKGKMIFLVRYGMLEEDVH*SMEMRS Trigger: ACTTCTCATCTCCATACTCCAATGTACATCTTCCTC...CAACATTCCATATCTTACTAAGAAAATCATTTTGCCCTTCACTAATCCGTTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069578.5 ENSMUST00000213218.2 |
||
| CDS-3UTR TCA 90 bp | GGAAACGGATTAGTGAAGGGCAAAATGATTTTCTTAGTAAGATATGGAATGTTGATTGGAGTATGGAGATaGGAAGTAGAGATGATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GNGLVKGKMIFLVRYGMLIGVWR*EVEMIS Trigger: ACTTATCATCTCTACTTCTCATCTCCATACTCCAAT...CAACATTCCATATCTTACTAAGAAAATCATTTTGCCCTTCACTAATCCGTTTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069578.5 ENSMUST00000213218.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAGAAGGTTAAGAATATGGAAATAGAAAAGAGTGGTGCATTTAATTCTGGGATTGGAGTATGGAGATaGGAAGTAGAGATGATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LEKVKNMEIEKSGAFNSGIGVWR*EVEMIS Trigger: ACTTATCATCTCTACTTCTCATCTCCATACTCCAAT...CCCAGAATTAAATGCACCACTCTTTTCTATTTCCATATTCTTAACCTTCTCAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| CDS-3UTR CAA 90 bp | GATCAAAAACTGATGTCACTAGAAAATAGCTCAGTGGTACAACACTTGCCTGGCGATCTCCATTTTCCATaGGCAGAGGGGATCCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DQKLMSLENSSVVQHLPGDLHFP*AEGIRR Trigger: CCTCCGGATCCCCTCTGCCAATGGAAAATGGAGATC...GCCAGGCAAGTGTTGTACCACTGAGCTATTTTCTAGTGACATCAGTTTTTGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000213218.2 |
||
| CDS-3UTR CAA 90 bp | GGAAACGGATTAGTGAAGGGCAAAATGATTTTCTTAGTAAGATATGGAATGTTGGATCTCCATTTTCCATaGGCAGAGGGGATCCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GNGLVKGKMIFLVRYGMLDLHFP*AEGIRR Trigger: CCTCCGGATCCCCTCTGCCAATGGAAAATGGAGATC...CAACATTCCATATCTTACTAAGAAAATCATTTTGCCCTTCACTAATCCGTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000069578.5 ENSMUST00000213218.2 |
||