Pregenerated sensors for OLFR355 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075380Ensembl transcript IDs: ENSMUST00000100147.2, ENSMUST00000213574.2
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CAAGGCTGGCCTCAAATTCACAAAGATTCTCCTGTCTCTGTCTTCTaGGTACCAGTATTAAAGTTGTGTACCACCACACCCTGCTTTGCT | + |
Preference number: 1 (lower is better) Translates to: QGWPQIHKDSPVSVF*VPVLKLCTTTPCFA Trigger: AGCAAAGCAGGGTGTGGTGGTACACAACTTTAATACTGGTACCCAGAAGACAGAGACAGGAGAATCTTTGTGAATTTGAGGCCAGCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR TCA 90 bp | TGGTGGTGTCTGGGAAGACTTGGACCGGGGCAATGGGAATGGATTTaGTTTATACAAATTACATATGTGTGTGAACTTCCGAAGGAATGG | + |
Preference number: 1 (lower is better) Translates to: WWCLGRLGPGQWEWI*FIQITYVCELPKEW Trigger: CCATTCCTTCGGAAGTTCACACACATATGTAATTTGTATAAATCAAATCCATTCCCATTGCCCCGGTCCAAGTCTTCCCAGACACCACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR CCA 90 bp | GTCAGAGGGCAAAGCATGAGTGAGTGTGGTTGCTCAGGTCTAAATTaGATATTTGTGTTACACTCCTTCTCCACATGGCTAAGAAATCAT | + |
Preference number: 1 (lower is better) Translates to: VRGQSMSECGCSGLN*IFVLHSFSTWLRNH Trigger: ATGATTTCTTAGCCATGTGGAGAAGGAGTGTAACACAAATATCCAATTTAGACCTGAGCAACCACACTCACTCATGCTTTGCCCTCTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR CCA 90 bp | ATGACTCTACACCTTATATGTATAGGCATCACTGATTGGACTCAGTaGGTTATAAAAACAGGAAATGAGCTTAGGAATTGGTGGTGTCTG | + |
Preference number: 1 (lower is better) Translates to: MTLHLICIGITDWTQ*VIKTGNELRNWWCL Trigger: CAGACACCACCAATTCCTAAGCTCATTTCCTGTTTTTATAACCCACTGAGTCCAATCAGTGATGCCTATACATATAAGGTGTAGAGTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR CCA 90 bp | CTCCAGAGAATGACTCTACACCTTATATGTATAGGCATCACTGATTaGACTCAGTGGGTTATAAAAACAGGAAATGAGCTTAGGAATTGG | + |
Preference number: 1 (lower is better) Translates to: LQRMTLHLICIGITD*TQWVIKTGNELRNW Trigger: CCAATTCCTAAGCTCATTTCCTGTTTTTATAACCCACTGAGTCCAATCAGTGATGCCTATACATATAAGGTGTAGAGTCATTCTCTGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR CAA 90 bp | CACAAAGATTCTCCTGTCTCTGTCTTCTGGGTACCAGTATTAAAGTaGTGTACCACCACACCCTGCTTTGCTCCACACCTTGATCTTCCT | + |
Preference number: 2 (lower is better) Translates to: HKDSPVSVFWVPVLK*CTTTPCFAPHLDLP Trigger: AGGAAGATCAAGGTGTGGAGCAAAGCAGGGTGTGGTGGTACACAACTTTAATACTGGTACCCAGAAGACAGAGACAGGAGAATCTTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR-3UTR TCA 90 bp | CCTTACCCAAGCACTATTCACATGCATATCCATCTTGTTCCACATCTTTCTTCCCTTTGCTCCACACCTTaGTCTTCCTCAAGGCAGCAA | + |
Preference number: 2 (lower is better) Translates to: PYPSTIHMHIHLVPHLSSLCSTP*SSSRQQ Trigger: TTGCTGCCTTGAGGAAGATCAAGGTGTGGAGCAAAG...GGAAGAAAGATGTGGAACAAGATGGATATGCATGTGAATAGTGCTTGGGTAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR-3UTR CCA 90 bp | CCCCATATCTGTTTGAGTCTATTTTCTTTAGGGATGTGGTTTCTGATAGGTTATGGAATTGGTGGTGTCTaGGAAGACTTGGACCGGGGC | + |
Preference number: 2 (lower is better) Translates to: PHICLSLFSLGMWFLIGYGIGGV*EDLDRG Trigger: GCCCCGGTCCAAGTCTTCCCAGACACCACCAATTCC...ATAACCTATCAGAAACCACATCCCTAAAGAAAATAGACTCAAACAGATATGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR-3UTR CCA 90 bp | TATAAAACAGTGTATTCCAGACATAAGAAAGCTACTGAACTCATGAACCCACAGGTGTCTGGGAAGACTTaGACCGGGGCAATGGGAATG | + |
Preference number: 2 (lower is better) Translates to: YKTVYSRHKKATELMNPQVSGKT*TGAMGM Trigger: CATTCCCATTGCCCCGGTCCAAGTCTTCCCAGACAC...CTGTGGGTTCATGAGTTCAGTAGCTTTCTTATGTCTGGAATACACTGTTTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR-3UTR GCA 90 bp | AGTGTGTTAAATGTTTTCAGATACACAAGCACTTGGTGTCTTGAATGCTCATTTAAGTGCTCTGCTTTGTaGTCCCTCCCTTACCCAAGC | + |
Preference number: 2 (lower is better) Translates to: SVLNVFRYTSTWCLECSFKCSAL*SLPYPS Trigger: GCTTGGGTAAGGGAGGGAGCACAAAGCAGAGCACTT...AAATGAGCATTCAAGACACCAAGTGCTTGTGTATCTGAAAACATTTAACACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR-3UTR GCA 90 bp | TATAAAACAGTGTATTCCAGACATAAGAAAGCTACTGAACTCATGAACCCACAGACAAGAAAGCATAAGTaGTCTGCTTTGTGCTCCCTC | + |
Preference number: 2 (lower is better) Translates to: YKTVYSRHKKATELMNPQTRKHK*SALCSL Trigger: GAGGGAGCACAAAGCAGAGCACTTATGCTTTCTTGT...CTGTGGGTTCATGAGTTCAGTAGCTTTCTTATGTCTGGAATACACTGTTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR-3UTR TCA 90 bp | CCATATCTGTTTGAGTCTATTTTCTTTAGGGATGTGGTTTCTGATAGGTTATCCAAGCACTTGGTGTCTTaGATGCTCATTTTCAGTTGC | + |
Preference number: 2 (lower is better) Translates to: PYLFESIFFRDVVSDRLSKHLVS*MLIFSC Trigger: GCAACTGAAAATGAGCATTCAAGACACCAAGTGCTT...GGATAACCTATCAGAAACCACATCCCTAAAGAAAATAGACTCAAACAGATATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR-3UTR CCA 90 bp | CCCCATATCTGTTTGAGTCTATTTTCTTTAGGGATGTGGTTTCTGATAGGTTATAATGAGCTTAGGAATTaGTGGTGTCTGGGAAGACTT | + |
Preference number: 2 (lower is better) Translates to: PHICLSLFSLGMWFLIGYNELRN*WCLGRL Trigger: AAGTCTTCCCAGACACCACCAATTCCTAAGCTCATT...ATAACCTATCAGAAACCACATCCCTAAAGAAAATAGACTCAAACAGATATGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR-3UTR TCA 90 bp | CCCCATATCTGTTTGAGTCTATTTTCTTTAGGGATGTGGTTTCTGATAGGTTATACAAATGCTAACCTCTaGCACTGTTTACTAAGAACA | + |
Preference number: 2 (lower is better) Translates to: PHICLSLFSLGMWFLIGYTNANL*HCLLRT Trigger: TGTTCTTAGTAAACAGTGTCAGAGGTTAGCATTTGT...ATAACCTATCAGAAACCACATCCCTAAAGAAAATAGACTCAAACAGATATGGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR-3UTR GCA 90 bp | CCCCATATCTGTTTGAGTCTATTTTCTTTAGGGATGTGGTTTCTGATAGGTTATACTTGGTGTCTTGAATaGTCATTTTCAGTTGCTAAT | + |
Preference number: 2 (lower is better) Translates to: PHICLSLFSLGMWFLIGYTWCLE*SFSVAN Trigger: ATTAGCAACTGAAAATGAGCATTCAAGACACCAAGT...ATAACCTATCAGAAACCACATCCCTAAAGAAAATAGACTCAAACAGATATGGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR GCA 72 bp | TGGGTACCAGTATTAAAGTTGTGTACCACCACACCCTaGTTTGCTCCACACCTTGATCTTCCTCAAGGCAGC | + |
Preference number: 3 (lower is better) Translates to: WVPVLKLCTTTP*FAPHLDLPQGS Trigger: GCTGCCTTGAGGAAGATCAAGGTGTGGAGCAAAGCAGGGTGTGGTGGTACACAACTTTAATACTGGTACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR-3UTR CAA 90 bp | TGCTACTTACTATGTACCCAAGGCTGGCCTCAAATTCACAAAGATTCTCCTGTCCCACCACACCCTGCTTaGCTCCACACCTTGATCTTC | + |
Preference number: 3 (lower is better) Translates to: CYLLCTQGWPQIHKDSPVPPHPA*LHTLIF Trigger: GAAGATCAAGGTGTGGAGCAAAGCAGGGTGTGGTGG...GACAGGAGAATCTTTGTGAATTTGAGGCCAGCCTTGGGTACATAGTAAGTAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR CCA 72 bp | TGGGTTATAAAAACAGGAAATGAGCTTAGGAATTGGTaGTGTCTGGGAAGACTTGGACCGGGGCAATGGGAA | + |
Preference number: 3 (lower is better) Translates to: WVIKTGNELRNW*CLGRLGPGQWE Trigger: TTCCCATTGCCCCGGTCCAAGTCTTCCCAGACACCACCAATTCCTAAGCTCATTTCCTGTTTTTATAACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR GCA 72 bp | CTTTGTGCTCCCTCCCTTACCCAAGCACTATTCACATaGATATCCATCTTGTTCCACATCTTTCTTCCTCTT | + |
Preference number: 3 (lower is better) Translates to: LCAPSLTQALFT*ISILFHIFLPL Trigger: AAGAGGAAGAAAGATGTGGAACAAGATGGATATGCATGTGAATAGTGCTTGGGTAAGGGAGGGAGCACAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR CCA 72 bp | CCTCAAATTCACAAAGATTCTCCTGTCTCTGTCTTCTaGGTACCAGTATTAAAGTTGTGTACCACCACACCC | + |
Preference number: 3 (lower is better) Translates to: PQIHKDSPVSVF*VPVLKLCTTTP Trigger: GGGTGTGGTGGTACACAACTTTAATACTGGTACCCAGAAGACAGAGACAGGAGAATCTTTGTGAATTTGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR-3UTR CAA 90 bp | CCCCATATCTGTTTGAGTCTATTTTCTTTAGGGATGTGGTTTCTGATAGGTTATGCTTTGCTCCACACCTaGATCTTCCTCAAGGCAGCA | + |
Preference number: 3 (lower is better) Translates to: PHICLSLFSLGMWFLIGYALLHT*IFLKAA Trigger: TGCTGCCTTGAGGAAGATCAAGGTGTGGAGCAAAGC...ATAACCTATCAGAAACCACATCCCTAAAGAAAATAGACTCAAACAGATATGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR TCA 72 bp | CTGGGAAGACTTGGACCGGGGCAATGGGAATGGATTTaGTTTATACAAATTACATATGTGTGTGAACTTCCG | + |
Preference number: 3 (lower is better) Translates to: LGRLGPGQWEWI*FIQITYVCELP Trigger: CGGAAGTTCACACACATATGTAATTTGTATAAATCAAATCCATTCCCATTGCCCCGGTCCAAGTCTTCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR CCA 72 bp | CAAAGCATGAGTGAGTGTGGTTGCTCAGGTCTAAATTaGATATTTGTGTTACACTCCTTCTCCACATGGCTA | + |
Preference number: 3 (lower is better) Translates to: QSMSECGCSGLN*IFVLHSFSTWL Trigger: TAGCCATGTGGAGAAGGAGTGTAACACAAATATCCAATTTAGACCTGAGCAACCACACTCACTCATGCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR-3UTR CAA 90 bp | CCTTACCCAAGCACTATTCACATGCATATCCATCTTGTTCCACATCTTTCTTCCCTGCTATTTTACCTGTaGAATCTGAGGTTCACAGAA | + |
Preference number: 3 (lower is better) Translates to: PYPSTIHMHIHLVPHLSSLLFYL*NLRFTE Trigger: TTCTGTGAACCTCAGATTCAACAGGTAAAATAGCAG...GGAAGAAAGATGTGGAACAAGATGGATATGCATGTGAATAGTGCTTGGGTAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR CCA 72 bp | CACCTTATATGTATAGGCATCACTGATTGGACTCAGTaGGTTATAAAAACAGGAAATGAGCTTAGGAATTGG | + |
Preference number: 3 (lower is better) Translates to: HLICIGITDWTQ*VIKTGNELRNW Trigger: CCAATTCCTAAGCTCATTTCCTGTTTTTATAACCCACTGAGTCCAATCAGTGATGCCTATACATATAAGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR CCA 72 bp | ATGACTCTACACCTTATATGTATAGGCATCACTGATTaGACTCAGTGGGTTATAAAAACAGGAAATGAGCTT | + |
Preference number: 3 (lower is better) Translates to: MTLHLICIGITD*TQWVIKTGNEL Trigger: AAGCTCATTTCCTGTTTTTATAACCCACTGAGTCCAATCAGTGATGCCTATACATATAAGGTGTAGAGTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR TCA 72 bp | CTCTTAAGACATGATTTGACACTTCTAATTCTATCTTaGGTTAATCAAGTTATCTGCCTGAAGCTAGTGTGT | + |
Preference number: 3 (lower is better) Translates to: LLRHDLTLLILS*VNQVICLKLVC Trigger: ACACACTAGCTTCAGGCAGATAACTTGATTAACTCAAGATAGAATTAGAAGTGTCAAATCATGTCTTAAGAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR CAA 72 bp | TCTCCTGTCTCTGTCTTCTGGGTACCAGTATTAAAGTaGTGTACCACCACACCCTGCTTTGCTCCACACCTT | + |
Preference number: 4 (lower is better) Translates to: SPVSVFWVPVLK*CTTTPCFAPHL Trigger: AAGGTGTGGAGCAAAGCAGGGTGTGGTGGTACACAACTTTAATACTGGTACCCAGAAGACAGAGACAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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CDS-3UTR GCA 90 bp | TGCTACTTACTATGTACCCAAGGCTGGCCTCAAATTCACAAAGATTCTCCTGTCAAGTGGAAAAGGCTTTaGGTTTCCCAGCAGCAGAAG | + |
Preference number: 4 (lower is better) Translates to: CYLLCTQGWPQIHKDSPVKWKRL*VSQQQK Trigger: CTTCTGCTGCTGGGAAACGCAAAGCCTTTTCCACTT...GACAGGAGAATCTTTGTGAATTTGAGGCCAGCCTTGGGTACATAGTAAGTAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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3UTR CAA 72 bp | GAAATGAGCTTAGGAATTGGTGGTGTCTGGGAAGACTaGGACCGGGGCAATGGGAATGGATTTGATTTATAC | + |
Preference number: 4 (lower is better) Translates to: EMSLGIGGVWED*DRGNGNGFDLY Trigger: GTATAAATCAAATCCATTCCCATTGCCCCGGTCCAAGTCTTCCCAGACACCACCAATTCCTAAGCTCATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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CDS-3UTR TCA 90 bp | CCATATCTGTTTGAGTCTATTTTCTTTAGGGATGTGGTTTCTGATAGGTTATCCATGGGAGTATGGAGATaGGGGTCAGAACGGATGGCC | + |
Preference number: 4 (lower is better) Translates to: PYLFESIFFRDVVSDRLSMGVWR*GSERMA Trigger: GGCCATCCGTTCTGACCCTCATCTCCATACTCCCAT...GGATAACCTATCAGAAACCACATCCCTAAAGAAAATAGACTCAAACAGATATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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CDS-3UTR TCA 90 bp | CCCTTACCCAAGCACTATTCACATGCATATCCATCTTGTTCCACATCTTTCTTCATTTTAACAGAGGACTaGGGTCACAGAGGAAATGGT | + |
Preference number: 4 (lower is better) Translates to: PLPKHYSHAYPSCSTSFFILTED*GHRGNG Trigger: ACCATTTCCTCTGTGACCTCAGTCCTCTGTTAAAAT...GAAGAAAGATGTGGAACAAGATGGATATGCATGTGAATAGTGCTTGGGTAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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CDS-3UTR CCA 90 bp | CCCTTACCCAAGCACTATTCACATGCATATCCATCTTGTTCCACATCTTTCTTCAAAAGTGAATGGAAGTaGGGAAAGGAGCAAGAGAAG | + |
Preference number: 4 (lower is better) Translates to: PLPKHYSHAYPSCSTSFFKSEWK*GKEQEK Trigger: CTTCTCTTGCTCCTTTCCCCACTTCCATTCACTTTT...GAAGAAAGATGTGGAACAAGATGGATATGCATGTGAATAGTGCTTGGGTAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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CDS-3UTR GCA 90 bp | AGCTTGCTACTTACTATGTACCCAAGGCTGGCCTCAAATTCACAAAGATTCTCCTTAAGTAAAAGTGTGTaGAAAAGTGAATGGAAGTGG | + |
Preference number: 4 (lower is better) Translates to: SLLLTMYPRLASNSQRFSLSKSV*KSEWKW Trigger: CCACTTCCATTCACTTTTGCACACACTTTTACTTAA...GGAGAATCTTTGTGAATTTGAGGCCAGCCTTGGGTACATAGTAAGTAGCAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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CDS-3UTR TCA 90 bp | AGTGTGTTAAATGTTTTCAGATACACAAGCACTTGGTGTCTTGAATGCTCATTTCTATCACAATCTCATTaGCAAATGTGGAGGAGCAGG | + |
Preference number: 4 (lower is better) Translates to: SVLNVFRYTSTWCLECSFLSQSH*QMWRSR Trigger: CCTGCTCCTCCACATTTGTCAATGAGATTGTGATAG...AAATGAGCATTCAAGACACCAAGTGCTTGTGTATCTGAAAACATTTAACACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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CDS-3UTR TCA 90 bp | TATAAAACAGTGTATTCCAGACATAAGAAAGCTACTGAACTCATGAACCCACAGAGGGTTGAGCATAGATaGCAAAACTGTGTAGACAAT | + |
Preference number: 4 (lower is better) Translates to: YKTVYSRHKKATELMNPQRVEHR*QNCVDN Trigger: ATTGTCTACACAGTTTTGTCATCTATGCTCAACCCT...CTGTGGGTTCATGAGTTCAGTAGCTTTCTTATGTCTGGAATACACTGTTTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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CDS-3UTR TCA 90 bp | AGTGTGTTAAATGTTTTCAGATACACAAGCACTTGGTGTCTTGAATGCTCATTTTCACAGAGGAAATGGTaGATAACATTTGAGTCACAA | + |
Preference number: 4 (lower is better) Translates to: SVLNVFRYTSTWCLECSFSQRKW*ITFESQ Trigger: TTGTGACTCAAATGTTATTCACCATTTCCTCTGTGA...AAATGAGCATTCAAGACACCAAGTGCTTGTGTATCTGAAAACATTTAACACACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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CDS-3UTR GCA 90 bp | CCCCATATCTGTTTGAGTCTATTTTCTTTAGGGATGTGGTTTCTGATAGGTTATTGTGTAGACAATTGTTaGTATATGGTCTTTGACAGT | + |
Preference number: 4 (lower is better) Translates to: PHICLSLFSLGMWFLIGYCVDNC*YMVFDS Trigger: ACTGTCAAAGACCATATAGCAACAATTGTCTACACA...ATAACCTATCAGAAACCACATCCCTAAAGAAAATAGACTCAAACAGATATGGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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CDS-3UTR CAA 90 bp | AGCTTGCTACTTACTATGTACCCAAGGCTGGCCTCAAATTCACAAAGATTCTCCGATAAACAGTGGTTTTaGGTCCTCAGGCCGAGGGGA | + |
Preference number: 5 (lower is better) Translates to: SLLLTMYPRLASNSQRFSDKQWF*VLRPRG Trigger: TCCCCTCGGCCTGAGGACCAAAAACCACTGTTTATC...GGAGAATCTTTGTGAATTTGAGGCCAGCCTTGGGTACATAGTAAGTAGCAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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CDS-3UTR CAA 90 bp | CCTTACCCAAGCACTATTCACATGCATATCCATCTTGTTCCACATCTTTCTTCCCAAGTGGAAAAGGCTTaGCGTTTCCCAGCAGCAGAA | + |
Preference number: 5 (lower is better) Translates to: PYPSTIHMHIHLVPHLSSQVEKA*RFPAAE Trigger: TTCTGCTGCTGGGAAACGCAAAGCCTTTTCCACTTG...GGAAGAAAGATGTGGAACAAGATGGATATGCATGTGAATAGTGCTTGGGTAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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CDS-3UTR CAA 90 bp | AGCTTGCTACTTACTATGTACCCAAGGCTGGCCTCAAATTCACAAAGATTCTCCATAGAGAAAATACATTaGTGTCAGACACCCTGCATA | + |
Preference number: 5 (lower is better) Translates to: SLLLTMYPRLASNSQRFSIEKIH*CQTPCI Trigger: TATGCAGGGTGTCTGACACAAATGTATTTTCTCTAT...GGAGAATCTTTGTGAATTTGAGGCCAGCCTTGGGTACATAGTAAGTAGCAAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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CDS-3UTR CAA 90 bp | CCCCATATCTGTTTGAGTCTATTTTCTTTAGGGATGTGGTTTCTGATAGGTTATACTATCACAATCTCATaGACAAATGTGGAGGAGCAG | + |
Preference number: 5 (lower is better) Translates to: PHICLSLFSLGMWFLIGYTITIS*TNVEEQ Trigger: CTGCTCCTCCACATTTGTCAATGAGATTGTGATAGT...ATAACCTATCAGAAACCACATCCCTAAAGAAAATAGACTCAAACAGATATGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213574.2 |
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CDS CAA 72 bp | CAGGTAAATTGTGAGGAAGAGGATAAACAGTGGTTTTaGGTCCTCAGGCCGAGGGGACAGTCCCAGGAGTAT | + |
Preference number: 6 (lower is better) Translates to: QVNCEEEDKQWF*VLRPRGQSQEY Trigger: ATACTCCTGGGACTGTCCCCTCGGCCTGAGGACCAAAAACCACTGTTTATCCTCTTCCTCACAATTTACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100147.2 ENSMUST00000213574.2 |
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CDS TCA 72 bp | AAACAAGAGCTCCTTCTGTCACTATCACAATCTCATTaGCAAATGTGGAGGAGCAGGATAATTTTAACAGAG | + |
Preference number: 6 (lower is better) Translates to: KQELLLSLSQSH*QMWRSRIILTE Trigger: CTCTGTTAAAATTATCCTGCTCCTCCACATTTGTCAATGAGATTGTGATAGTGACAGAAGGAGCTCTTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100147.2 ENSMUST00000213574.2 |
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CDS CAA 72 bp | AAAACAAGAGCTCCTTCTGTCACTATCACAATCTCATaGACAAATGTGGAGGAGCAGGATAATTTTAACAGA | + |
Preference number: 6 (lower is better) Translates to: KTRAPSVTITIS*TNVEEQDNFNR Trigger: TCTGTTAAAATTATCCTGCTCCTCCACATTTGTCAATGAGATTGTGATAGTGACAGAAGGAGCTCTTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100147.2 ENSMUST00000213574.2 |