Pregenerated sensors for OLFR354 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055088Ensembl transcript IDs: ENSMUST00000068475.5, ENSMUST00000217479.2
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTCTGGCCTCACTGAGAGAGGAAATGCCTAGCCTGGCAGAGACTTaGAATGACAGGGTTCAGGGACACCCAGGGAGTCTCCCACCTGCT | + |
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Preference number: 1 (lower is better) Translates to: CLASLREEMPSLAET*NDRVQGHPGSLPPA Trigger: AGCAGGTGGGAGACTCCCTGGGTGTCCCTGAACCCTGTCATTTCAAGTCTCTGCCAGGCTAGGCATTTCCTCTCTCAGTGAGGCCAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR GCA 90 bp | AGATGGCCTAGTAGGCCATCAATGGAAAGAGAGGCCCATTGGTCATaGAAACTTTATATGCCTCAGTACAGGGGAACACCAGGGTCAAGA | + |
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Preference number: 1 (lower is better) Translates to: RWPSRPSMEREAHWS*KLYMPQYRGTPGSR Trigger: TCTTGACCCTGGTGTTCCCCTGTACTGAGGCATATAAAGTTTGCATGACCAATGGGCCTCTCTTTCCATTGATGGCCTACTAGGCCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CCA 90 bp | GATGGCCAGCAAATGGTGGTATCCTTGTCCCTTTGTCTCATTGCATaGCTGCCTCAATGGCTCCAGGATGGACAACATGAAACTCAGTTA | + |
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Preference number: 1 (lower is better) Translates to: DGQQMVVSLSLCLIA*LPQWLQDGQHETQL Trigger: TAACTGAGTTTCATGTTGTCCATCCTGGAGCCATTGAGGCAGCCATGCAATGAGACAAAGGGACAAGGATACCACCATTTGCTGGCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CCA 90 bp | ATCAGAAGATGGCCTAGTAGGCCATCAATGGAAAGAGAGGCCCATTaGTCATGCAAACTTTATATGCCTCAGTACAGGGGAACACCAGGG | + |
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Preference number: 1 (lower is better) Translates to: IRRWPSRPSMEREAH*SCKLYMPQYRGTPG Trigger: CCCTGGTGTTCCCCTGTACTGAGGCATATAAAGTTTGCATGACCAATGGGCCTCTCTTTCCATTGATGGCCTACTAGGCCATCTTCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR TCA 90 bp | AGCTTCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTGCTaGAAGGACCCAGATATAGCTGTCTCTTGTGAGATATGCCGGGGC | + |
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Preference number: 1 (lower is better) Translates to: SFQTLTPLHTLARFC*KDPDIAVSCEICRG Trigger: GCCCCGGCATATCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR TCA 90 bp | TCCGTGTATCTCAGGCTAGCTTTGAACTCAAGATGTAGCTCATGCTaGTTCTCCCTCCTCAGATTCCTGAGTGCTAGGAAAACAAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: SVYLRLALNSRCSSC*FSLLRFLSARKTSK Trigger: CTTGCTTGTTTTCCTAGCACTCAGGAATCTGAGGAGGGAGAATCAGCATGAGCTACATCTTGAGTTCAAAGCTAGCCTGAGATACACGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CCA 90 bp | ATGGTGGTATCCTTGTCCCTTTGTCTCATTGCATGGCTGCCTCAATaGCTCCAGGATGGACAACATGAAACTCAGTTAATCCTGGTTGAT | + |
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Preference number: 1 (lower is better) Translates to: MVVSLSLCLIAWLPQ*LQDGQHETQLILVD Trigger: ATCAACCAGGATTAACTGAGTTTCATGTTGTCCATCCTGGAGCCATTGAGGCAGCCATGCAATGAGACAAAGGGACAAGGATACCACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CCA 90 bp | AAAGTGGATAAGAACTCCACAGGAAGTCCAACAGAGTCAACTAACTaGGACCCTTGGGGCTCTCAGAATCTCAACCACCAACCAAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: KVDKNSTGSPTESTN*DPWGSQNLNHQPKN Trigger: ATTCTTTGGTTGGTGGTTGAGATTCTGAGAGCCCCAAGGGTCCCAGTTAGTTGACTCTGTTGGACTTCCTGTGGAGTTCTTATCCACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CCA 90 bp | GGGGACTCTTATAGAAGAATAGGAGGAAGAATTGTGGGCCCAAAGTaGATAAGAACTCCACAGGAAGTCCAACAGAGTCAACTAACTGGG | + |
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Preference number: 1 (lower is better) Translates to: GDSYRRIGGRIVGPK*IRTPQEVQQSQLTG Trigger: CCCAGTTAGTTGACTCTGTTGGACTTCCTGTGGAGTTCTTATCCACTTTGGGCCCACAATTCTTCCTCCTATTCTTCTATAAGAGTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR TCA 90 bp | AAGTGCTCCCCTTGCTTCACATCCTCTCCTGCACATGCTTTCTCTTaGGTTTTTGATCTTAGCTATTGTGACGGGTGTAAGATGGAACCT | + |
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Preference number: 1 (lower is better) Translates to: KCSPCFTSSPAHAFS*VFDLSYCDGCKMEP Trigger: AGGTTCCATCTTACACCCGTCACAATAGCTAAGATCAAAAACTCAAGAGAAAGCATGTGCAGGAGAGGATGTGAAGCAAGGGGAGCACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CCA 90 bp | TCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTAGGCCATCAATaGAAAGAGAGGCCCATTGGTCATGCAAACTTTATATGCCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: SLAAYVSEDGLVGHQ*KERPIGHANFICLS Trigger: ACTGAGGCATATAAAGTTTGCATGACCAATGGGCCTCTCTTTCCATTGATGGCCTACTAGGCCATCTTCTGATACATATGCAGCTAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CCA 90 bp | TCTACAAGAAATACAGGCATGAGGGATAGAGCAGAGTCTGGGGAATaGATAACTAATAACTGGCTCAACTTGAGAACTATTCCAAGGGTA | + |
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Preference number: 1 (lower is better) Translates to: STRNTGMRDRAESGE*ITNNWLNLRTIPRV Trigger: TACCCTTGGAATAGTTCTCAAGTTGAGCCAGTTATTAGTTATCCATTCCCCAGACTCTGCTCTATCCCTCATGCCTGTATTTCTTGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR TCA 90 bp | CTTCACACTTCTCTTTCAAAAGATTTGATGTTTTTGAACAATGAGTaGCAGTGTGGATGGCCAGCAAATGGTGGTATCCTTGTCCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: LHTSLSKDLMFLNNE*QCGWPANGGILVPL Trigger: CAAAGGGACAAGGATACCACCATTTGCTGGCCATCCACACTGTCACTCATTGTTCAAAAACATCAAATCTTTTGAAAGAGAAGTGTGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CCA 90 bp | TATGCAAGACAGGCTGCTTTTAAACTCAGGATCCTGCAGCTTCTATaGGATGGAATTTTAGTTATGCACCACTACAACTCAACCCAAAAA | + |
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Preference number: 1 (lower is better) Translates to: YARQAAFKLRILQLL*DGILVMHHYNSTQK Trigger: TTTTTGGGTTGAGTTGTAGTGGTGCATAACTAAAATTCCATCCCATAGAAGCTGCAGGATCCTGAGTTTAAAAGCAGCCTGTCTTGCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR TCA 90 bp | ATAAAAACAGTGTTTAGTAGAAGAGATAAACATAGAGAAGACAGATaGAGAAGAGAAGCAAGAAGAGAAAGGCCTAAGGGAAGGGTAGAC | + |
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Preference number: 1 (lower is better) Translates to: IKTVFSRRDKHREDR*RREARRERPKGRVD Trigger: GTCTACCCTTCCCTTAGGCCTTTCTCTTCTTGCTTCTCTTCTTCATCTGTCTTCTCTATGTTTATCTCTTCTACTAAACACTGTTTTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR TCA 90 bp | ATTTGGTTATTTGGGTTGTTGGTGTCTGACTTCTTGAGTTCTTTGTaGATTTTGGATACTAGCCTCTGTCAGATTCATGAAGATCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: IWLFGLLVSDFLSSL*ILDTSLCQIHEDPF Trigger: GAAAGGATCTTCATGAATCTGACAGAGGCTAGTATCCAAAATTCACAAAGAACTCAAGAAGTCAGACACCAACAACCCAAATAACCAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CCA 90 bp | GACCCAAAGGAGCTAAACAAGAAGGAAAGACCAAACAAGGAAGCTTaGATCTCACTTATAAGGGAGAATAAAATAGTAATAAGAGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: DPKELNKKERPNKEA*ISLIRENKIVIRGR Trigger: TCTTCCTCTTATTACTATTTTATTCTCCCTTATAAGTGAGATCCAAGCTTCCTTGTTTGGTCTTTCCTTCTTGTTTAGCTCCTTTGGGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTCTCCCAACAGCAGTGAAGAAGTGCTCCCCTTGCTTCACATCCTCTCCTGCGTCTCATTGCATGGCTaGCTCAATGGCTCCAGGATG | + |
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Preference number: 2 (lower is better) Translates to: CSPNSSEEVLPLLHILSCVSLHG*LNGSRM Trigger: CATCCTGGAGCCATTGAGGCAGCCATGCAATGAGAC...GCAGGAGAGGATGTGAAGCAAGGGGAGCACTTCTTCACTGCTGTTGGGAGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTAGGAACTCCAGTGGAGCAATAGAGACAGCAACCTGCCCACAAAATGTTGTCAAGAAGTGGGAGTaGGTGGGTGGGGGAGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: PGRNSSGAIETATCPQNVVKKWE*VGGGVG Trigger: ACCCACTCCCCCACCCACCCACTCCCACTTCTTGAC...AACATTTTGTGGGCAGGTTGCTGTCTCTATTGCTCCACTGGAGTTCCTACCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CAA 90 bp | GTGTGGATGGCCAGCAAATGGTGGTATCCTTGTCCCTTTGTCTCATaGCATGGCTGCCTCAATGGCTCCAGGATGGACAACATGAAACTC | + |
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Preference number: 2 (lower is better) Translates to: VWMASKWWYPCPFVS*HGCLNGSRMDNMKL Trigger: GAGTTTCATGTTGTCCATCCTGGAGCCATTGAGGCAGCCATGCAATGAGACAAAGGGACAAGGATACCACCATTTGCTGGCCATCCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGCCTAGTAGGCCATCAATGGAAAGAGAGGCCCATTGGTCATGCAAACTTTGTGGAAATGGGGCCATaGAGGGGACTAGGGTTAATG | + |
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Preference number: 2 (lower is better) Translates to: DGLVGHQWKERPIGHANFVEMGP*RGLGLM Trigger: CATTAACCCTAGTCCCCTGCATGGCCCCATTTCCAC...AAAGTTTGCATGACCAATGGGCCTCTCTTTCCATTGATGGCCTACTAGGCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CAA 90 bp | AAGCCAGTCAATATTCCAGTGCAGATGAAGGAGACCACAAGCCCCTaGGTCCCTAAAGGAGTTACGTTAGGTAGCTGGCAGAAGTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: KPVNIPVQMKETTSP*VPKGVTLGSWQKLK Trigger: CTTCAACTTCTGCCAGCTACCTAACGTAACTCCTTTAGGGACCAAGGGGCTTGTGGTCTCCTTCATCTGCACTGGAATATTGACTGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCCTTGCTAGTTCACATTATGCCCAAAGGTGATATGCAAGCTGTAAGAGGAACCAGGGTCAAGAAGTaGGAGTGGGTGGGTGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: FSLLVHIMPKGDMQAVRGTRVKK*EWVGGG Trigger: TCCCCCACCCACCCACTCCCACTTCTTGACCCTGGT...TCCTCTTACAGCTTGCATATCACCTTTGGGCATAATGTGAACTAGCAAGGAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTCTCCCAACAGCAGTGAAGAAGTGCTCCCCTTGCTTCACATCCTCTCCTGCAATTTTGCAGGCCAATaGCTGGAATGTGAGAATATC | + |
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Preference number: 2 (lower is better) Translates to: CSPNSSEEVLPLLHILSCNFAGQ*LECENI Trigger: GATATTCTCACATTCCAGCCATTGGCCTGCAAAATT...GCAGGAGAGGATGTGAAGCAAGGGGAGCACTTCTTCACTGCTGTTGGGAGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTCTCCCAACAGCAGTGAAGAAGTGCTCCCCTTGCTTCACATCCTCTCCTGCTACATCATGACAAAGTaGTATTCTGTCTCAGCTATC | + |
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Preference number: 2 (lower is better) Translates to: CSPNSSEEVLPLLHILSCYIMTK*YSVSAI Trigger: GATAGCTGAGACAGAATACCACTTTGTCATGATGTA...GCAGGAGAGGATGTGAAGCAAGGGGAGCACTTCTTCACTGCTGTTGGGAGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTAGGAACTCCAGTGGAGCAATAGAGACAGCAACCTGCCCACAAAATGTTATTGTGGGCCCAAAGTaGATAAGAACTCCACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PGRNSSGAIETATCPQNVIVGPK*IRTPQE Trigger: TTCCTGTGGAGTTCTTATCCACTTTGGGCCCACAAT...AACATTTTGTGGGCAGGTTGCTGTCTCTATTGCTCCACTGGAGTTCCTACCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTCTTGAAACTTCTGCAAGTGTAACCTTTTCAGAAATTGCCTCCATTCAGTTGTCTGCACCGAGCTaGTTTAGGATGCTGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: AALETSASVTFSEIASIQLSAPS*FRMLGS Trigger: GCTTCCCAGCATCCTAAACCAGCTCGGTGCAGACAA...CTGAATGGAGGCAATTTCTGAAAAGGTTACACTTGCAGAAGTTTCAAGAGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTCTCCCAACAGCAGTGAAGAAGTGCTCCCCTTGCTTCACATCCTCTCCTGCAAAAACTCAACAAATTaGAAACAGAGAGTAACTGCC | + |
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Preference number: 2 (lower is better) Translates to: CSPNSSEEVLPLLHILSCKNSTN*KQRVTA Trigger: GGCAGTTACTCTCTGTTTCCAATTTGTTGAGTTTTT...GCAGGAGAGGATGTGAAGCAAGGGGAGCACTTCTTCACTGCTGTTGGGAGAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGTAGGAACTCCAGTGGAGCAATAGAGACAGCAACCTGCCCACAAAATGTTATACTGTGGAAAGTGTaGAATCAAAACCCAAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: PGRNSSGAIETATCPQNVILWKV*NQNPSP Trigger: TGGACTTGGGTTTTGATTTCACACTTTCCACAGTAT...AACATTTTGTGGGCAGGTTGCTGTCTCTATTGCTCCACTGGAGTTCCTACCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGCCTAGTAGGCCATCAATGGAAAGAGAGGCCCATTGGTCATGCAAACTTTCTTGCAGTCACAATCTaGTTAAACCCACACAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: DGLVGHQWKERPIGHANFLAVTI*LNPHKK Trigger: CTTCTTGTGTGGGTTTAAGCAGATTGTGACTGCAAG...AAAGTTTGCATGACCAATGGGCCTCTCTTTCCATTGATGGCCTACTAGGCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTCTTGAAACTTCTGCAAGTGTAACCTTTTCAGAAATTGCCTCCATTCAGCTTTGTCTCATTGCATaGCTGCCTCAATGGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: AALETSASVTFSEIASIQLCLIA*LPQWLQ Trigger: CTGGAGCCATTGAGGCAGCCATGCAATGAGACAAAG...CTGAATGGAGGCAATTTCTGAAAAGGTTACACTTGCAGAAGTTTCAAGAGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTAGGAACTCCAGTGGAGCAATAGAGACAGCAACCTGCCCACAAAATGTTGCAGCTTCTATGGGATaGAATTTTAGTTATGCACCA | + |
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Preference number: 2 (lower is better) Translates to: PGRNSSGAIETATCPQNVAASMG*NFSYAP Trigger: TGGTGCATAACTAAAATTCCATCCCATAGAAGCTGC...AACATTTTGTGGGCAGGTTGCTGTCTCTATTGCTCCACTGGAGTTCCTACCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGTAGGAACTCCAGTGGAGCAATAGAGACAGCAACCTGCCCACAAAATGTTGATAAGGACCAAGGATaGTATTCTGTTGTCAACAAT | + |
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Preference number: 2 (lower is better) Translates to: PGRNSSGAIETATCPQNVDKDQG*YSVVNN Trigger: ATTGTTGACAACAGAATATCATCCTTGGTCCTTATC...AACATTTTGTGGGCAGGTTGCTGTCTCTATTGCTCCACTGGAGTTCCTACCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGTAGGAACTCCAGTGGAGCAATAGAGACAGCAACCTGCCCACAAAATGTTCAAACCCACATTGTTTaGAGGGAATGTTTTGTTATG | + |
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Preference number: 2 (lower is better) Translates to: PGRNSSGAIETATCPQNVQTHIV*RECFVM Trigger: CATAACAAAACATTCCCTTCAAACAATGTGGGTTTG...AACATTTTGTGGGCAGGTTGCTGTCTCTATTGCTCCACTGGAGTTCCTACCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGTAGGAACTCCAGTGGAGCAATAGAGACAGCAACCTGCCCACAAAATGTTAAACACAGAAGTGAATaGTCACATTCAGCTATTGGA | + |
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Preference number: 2 (lower is better) Translates to: PGRNSSGAIETATCPQNVKHRSE*SHSAIG Trigger: TCCAATAGCTGAATGTGAGCATTCACTTCTGTGTTT...AACATTTTGTGGGCAGGTTGCTGTCTCTATTGCTCCACTGGAGTTCCTACCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGGTAAGTACCAGTCCCTGACACTATTAATGATACTTTGTTATGCTTGCAGACCCTCCTCAGATTCCTaGGTGCTAGGAAAACAAGCA | + |
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Preference number: 2 (lower is better) Translates to: KGKYQSLTLLMILCYACRPSSDS*VLGKQA Trigger: TGCTTGTTTTCCTAGCACTCAGGAATCTGAGGAGGG...TCTGCAAGCATAACAAAGTATCATTAATAGTGTCAGGGACTGGTACTTACCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAGTGCTCATATATATTTGGGTCAACTTTATCAACCTCTCACTATTCAGGGATATAGCTGTCTCTTGTaGGATATGCCGGGGCCTAAC | + |
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Preference number: 2 (lower is better) Translates to: LSAHIYLGQLYQPLTIQGYSCLL*DMPGPN Trigger: GTTAGGCCCCGGCATATCTCACAAGAGACAGCTATA...TCCCTGAATAGTGAGAGGTTGATAAAGTTGACCCAAATATATATGAGCACTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCTAGTTCACATTATGCCCAAAGGTGATATGCAAGCTGTAAGAGGAGAAAAAATATTCCAGTGCAGATaGAGGAGACCACAAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: LLVHIMPKGDMQAVRGEKIFQCR*RRPQAP Trigger: AGGGGCTTGTGGTCTCCTTCATCTGCACTGGAATAT...TTTTTCTCCTCTTACAGCTTGCATATCACCTTTGGGCATAATGTGAACTAGCAA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAGTGCTCATATATATTTGGGTCAACTTTATCAACCTCTCACTATTCAGGGAAAGAAGTGCTCCCCTTaGTTCACATCCTCTCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: LSAHIYLGQLYQPLTIQGKKCSP*FTSSPA Trigger: TGCAGGAGAGGATGTGAAGCAAGGGGAGCACTTCTT...TCCCTGAATAGTGAGAGGTTGATAAAGTTGACCCAAATATATATGAGCACTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR CCA 90 bp | CTCATTCATTCCACAGTGGATGTCCAAGCAGTAAGTGAAACTGGCAATATTAATAGAAGAAGAGAGAGGTaGGGTGAGGGAAAACTTGTG | + |
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Preference number: 2 (lower is better) Translates to: LIHSTVDVQAVSETGNINRRRER*GEGKLV Trigger: CACAAGTTTTCCCTCACCCCACCTCTCTCTTCTTCT...ATTAATATTGCCAGTTTCACTTACTGCTTGGACATCCACTGTGGAATGAATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CAA 90 bp | CAGTTAATCCTGGTTGATAAGATAAGGACCAAGGATGATATTCTGTaGTCAACAATGGAAGTCAGCCTTAGGTCAAGAAGGATGGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: QLILVDKIRTKDDIL*STMEVSLRSRRMEV Trigger: TACCTCCATCCTTCTTGACCTAAGGCTGACTTCCATTGTTGACAACAGAATATCATCCTTGGTCCTTATCTTATCAACCAGGATTAACTG 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCTCTTGAAACTTCTGCAAGTGTAACCTTTTCAGAAATTGCCTCCATTCAGATCCCTAACCCAAAATaGTACATGTGCACATGTAAC | + |
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Preference number: 2 (lower is better) Translates to: AALETSASVTFSEIASIQIPNPK*YMCTCN Trigger: GTTACATGTGCACATGTATCATTTTGGGTTAGGGAT...CTGAATGGAGGCAATTTCTGAAAAGGTTACACTTGCAGAAGTTTCAAGAGCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCTAGTTCACATTATGCCCAAAGGTGATATGCAAGCTGTAAGAGGAGAAAAAGACACCGAGAGCTTATaGATAGCAAAGGTCAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: LLVHIMPKGDMQAVRGEKDTESL*IAKVSK Trigger: TTTGCTGACCTTTGCTATGCATAAGCTCTCGGTGTC...TTTTTCTCCTCTTACAGCTTGCATATCACCTTTGGGCATAATGTGAACTAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR GCA 90 bp | TTTTCCTTGCTAGTTCACATTATGCCCAAAGGTGATATGCAAGCTGTAAGAGGAAATAAAGGTCAAGCATaGCATGTGGGGAGAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: FSLLVHIMPKGDMQAVRGNKGQA*HVGRKT Trigger: TGTCTTTCTCCCCACATGGCATGCTTGACCTTTATT...TCCTCTTACAGCTTGCATATCACCTTTGGGCATAATGTGAACTAGCAAGGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCTAGTTCACATTATGCCCAAAGGTGATATGCAAGCTGTAAGAGGAGAAAAACTTCACATCCTCTCCTaGACATGCTTTCTCTTGAGT | + |
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Preference number: 2 (lower is better) Translates to: LLVHIMPKGDMQAVRGEKLHILS*TCFLLS Trigger: ACTCAAGAGAAAGCATGTGCAGGAGAGGATGTGAAG...TTTTTCTCCTCTTACAGCTTGCATATCACCTTTGGGCATAATGTGAACTAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCTAGTTCACATTATGCCCAAAGGTGATATGCAAGCTGTAAGAGGAGAAAAAAGCGGTAATGATGGGTaGATGTGCCAACATACATTG | + |
|
Preference number: 2 (lower is better) Translates to: LLVHIMPKGDMQAVRGEKSGNDG*MCQHTL Trigger: CAATGTATGTTGGCACATCCACCCATCATTACCGCT...TTTTTCTCCTCTTACAGCTTGCATATCACCTTTGGGCATAATGTGAACTAGCAA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR TCA 90 bp | AAACCCCATGCCCACAAATTTGCTAGCTTAAATGAACTAGACAAATTTCTTGCACCAGGATGGACAACATaGAACTCAGTTAATCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: KPHAHKFASLNELDKFLAPGWTT*NSVNPG Trigger: ACCAGGATTAACTGAGTTTCATGTTGTCCATCCTGG...TGCAAGAAATTTGTCTAGTTCATTTAAGCTAGCAAATTTGTGGGCATGGGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR TCA 90 bp | AAACCCCATGCCCACAAATTTGCTAGCTTAAATGAACTAGACAAATTTCTTGCAGATGTTTTTGAACAATaGGTGACAGTGTGGATGGCC | + |
|
Preference number: 2 (lower is better) Translates to: KPHAHKFASLNELDKFLADVFEQ*VTVWMA Trigger: GGCCATCCACACTGTCACTCATTGTTCAAAAACATC...TGCAAGAAATTTGTCTAGTTCATTTAAGCTAGCAAATTTGTGGGCATGGGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGAGTGCTCATATATATTTGGGTCAACTTTATCAACCTCTCACTATTCAGGGAAACCTTTTCAGAAATTaGCTCCATTCAGTGTGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LSAHIYLGQLYQPLTIQGNLFRN*LHSVCC Trigger: GCAGCACACTGAATGGAGGCAATTTCTGAAAAGGTT...TCCCTGAATAGTGAGAGGTTGATAAAGTTGACCCAAATATATATGAGCACTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTTCCTTGCTAGTTCACATTATGCCCAAAGGTGATATGCAAGCTGTAAGAGGATTCCCAGGCTTCTTCTaGTTAACATTCTGCAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: FSLLVHIMPKGDMQAVRGFPGFF*LTFCKE Trigger: TTCTTTGCAGAATGTTAAGCAGAAGAAGCCTGGGAA...TCCTCTTACAGCTTGCATATCACCTTTGGGCATAATGTGAACTAGCAAGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR CAA 90 bp | ATAAAAATTCACCAGCCTCAACTGACAAGGAAACTCTCTTTTTCCTaGCTAGTTCACATTATGCCCAAAGGTGATATGCAAGCTGTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: IKIHQPQLTRKLSFS*LVHIMPKGDMQAVR Trigger: TCTTACAGCTTGCATATCACCTTTGGGCATAATGTGAACTAGCAAGGAAAAAGAGAGTTTCCTTGTCAGTTGAGGCTGGTGAATTTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGCTAGTTCACATTATGCCCAAAGGTGATATGCAAGCTGTAAGAGGAGAAAAAGTGAGAATATCATTGTaGGTGAAATATCCTAGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: LLVHIMPKGDMQAVRGEKVRISL*VKYPSA Trigger: GGCACTAGGATATTTCACTCACAATGATATTCTCAC...TTTTTCTCCTCTTACAGCTTGCATATCACCTTTGGGCATAATGTGAACTAGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTTCCTTGCTAGTTCACATTATGCCCAAAGGTGATATGCAAGCTGTAAGAGGATTCTTGAGTTCTTTGTaGATTTTGGATACTAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: FSLLVHIMPKGDMQAVRGFLSSL*ILDTSL Trigger: GAGGCTAGTATCCAAAATTCACAAAGAACTCAAGAA...TCCTCTTACAGCTTGCATATCACCTTTGGGCATAATGTGAACTAGCAAGGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGAGTGCTCATATATATTTGGGTCAACTTTATCAACCTCTCACTATTCAGGGATGTTCTTTGAGGTTATaGATACTGGTAAGCTGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LSAHIYLGQLYQPLTIQGCSLRL*ILVSCS Trigger: TGAGCAGCTTACCAGTATTCATAACCTCAAAGAACA...TCCCTGAATAGTGAGAGGTTGATAAAGTTGACCCAAATATATATGAGCACTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCATTCATTCCACAGTGGATGTCCAAGCAGTAAGTGAAACTGGCAATATTAATTTCTGTTGTCAACAATaGAAGTCAGCCTTAGGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: LIHSTVDVQAVSETGNINFCCQQ*KSALGQ Trigger: TTGACCTAAGGCTGACTTCCATTGTTGACAACAGAA...ATTAATATTGCCAGTTTCACTTACTGCTTGGACATCCACTGTGGAATGAATGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGTAAGTACCAGTCCCTGACACTATTAATGATACTTTGTTATGCTTGCAGATTTAAGAGGCAGTCATaGTGTAAAACAGCAGCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: KGKYQSLTLLMILCYACRFKRQS*CKTAAL Trigger: AAGAGCTGCTGTTTTACACCATGACTGCCTCTTAAA...TCTGCAAGCATAACAAAGTATCATTAATAGTGTCAGGGACTGGTACTTACCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR CAA 90 bp | GTTATTATGAATGAAGTTGCTATGAACATAGTTGAGCAAATGTCTTaGTGGAATGTTGGAGCATCTTTTGGGTATATGCCCAGGAGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: VIMNEVAMNIVEQMS*WNVGASFGYMPRSC Trigger: ACAACTCCTGGGCATATACCCAAAAGATGCTCCAACATTCCACAAAGACATTTGCTCAACTATGTTCATAGCAACTTCATTCATAATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCATTCATTCCACAGTGGATGTCCAAGCAGTAAGTGAAACTGGCAATATTAATGTCTTTGTGGAATGTTaGAGCATCTTTTGGGTATAT | + |
|
Preference number: 2 (lower is better) Translates to: LIHSTVDVQAVSETGNINVFVEC*SIFWVY Trigger: ATATACCCAAAAGATGCTCCAACATTCCACAAAGAC...ATTAATATTGCCAGTTTCACTTACTGCTTGGACATCCACTGTGGAATGAATGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR CAA 90 bp | GAGAGATTGGTGAGCGGTAATGATGGGTGGATGTGCCAACATACATaGTATGAATTCATGGAATTTTCAAATCATAAAGAGTATCACATT | + |
|
Preference number: 2 (lower is better) Translates to: ERLVSGNDGWMCQHT*YEFMEFSNHKEYHI Trigger: AATGTGATACTCTTTATGATTTGAAAATTCCATGAATTCATACAATGTATGTTGGCACATCCACCCATCATTACCGCTCACCAATCTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR CAA 90 bp | TGCATTACCCCGATGATTAATGACTTTGAACATTTCTTTACATGCTaGGATATTAGAGATTCCTCTGTTGAAAACTCTCTGTTTAGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: CITPMINDFEHFFTC*DIRDSSVENSLFSS Trigger: AGAGCTAAACAGAGAGTTTTCAACAGAGGAATCTCTAATATCCAAGCATGTAAAGAAATGTTCAAAGTCATTAATCATCGGGGTAATGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR CCA 90 bp | AAACCCCATGCCCACAAATTTGCTAGCTTAAATGAACTAGACAAATTTCTTGCATTAGGTCAAGAAGGATaGAGGTATAAGATCTCATTT | + |
|
Preference number: 2 (lower is better) Translates to: KPHAHKFASLNELDKFLALGQEG*RYKISF Trigger: AAATGAGATCTTATACCTCCATCCTTCTTGACCTAA...TGCAAGAAATTTGTCTAGTTCATTTAAGCTAGCAAATTTGTGGGCATGGGGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR TCA 72 bp | TCACTGAGAGAGGAAATGCCTAGCCTGGCAGAGACTTaGAATGACAGGGTTCAGGGACACCCAGGGAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SLREEMPSLAET*NDRVQGHPGSL Trigger: GAGACTCCCTGGGTGTCCCTGAACCCTGTCATTTCAAGTCTCTGCCAGGCTAGGCATTTCCTCTCTCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR GCA 72 bp | CCAGCAAATGGTGGTATCCTTGTCCCTTTGTCTCATTaGATGGCTGCCTCAATGGCTCCAGGATGGACAACA | + |
|
Preference number: 3 (lower is better) Translates to: PANGGILVPLSH*MAASMAPGWTT Trigger: TGTTGTCCATCCTGGAGCCATTGAGGCAGCCATGCAATGAGACAAAGGGACAAGGATACCACCATTTGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR GCA 72 bp | TGGAAAGAGAGGCCCATTGGTCATGCAAACTTTATATaGCTCAGTACAGGGGAACACCAGGGTCAAGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: WKERPIGHANFI*LSTGEHQGQEV Trigger: CACTTCTTGACCCTGGTGTTCCCCTGTACTGAGGCATATAAAGTTTGCATGACCAATGGGCCTCTCTTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR CCA 72 bp | CAAATGGTGGTATCCTTGTCCCTTTGTCTCATTGCATaGCTGCCTCAATGGCTCCAGGATGGACAACATGAA | + |
|
Preference number: 3 (lower is better) Translates to: QMVVSLSLCLIA*LPQWLQDGQHE Trigger: TTCATGTTGTCCATCCTGGAGCCATTGAGGCAGCCATGCAATGAGACAAAGGGACAAGGATACCACCATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR CCA 72 bp | TGGCCTAGTAGGCCATCAATGGAAAGAGAGGCCCATTaGTCATGCAAACTTTATATGCCTCAGTACAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WPSRPSMEREAH*SCKLYMPQYRG Trigger: TCCCCTGTACTGAGGCATATAAAGTTTGCATGACCAATGGGCCTCTCTTTCCATTGATGGCCTACTAGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR TCA 72 bp | GATGTAGCTCATGCTGATTCTCCCTCCTCAGATTCCTaGGTGCTAGGAAAACAAGCAAGTACTACCTTACCC | + |
|
Preference number: 3 (lower is better) Translates to: DVAHADSPSSDS*VLGKQASTTLP Trigger: GGGTAAGGTAGTACTTGCTTGTTTTCCTAGCACTCAGGAATCTGAGGAGGGAGAATCAGCATGAGCTACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR GCA 72 bp | TTTTATAAGTTTGCTCTCCCAACAGCAGTGAAGAAGTaGTCCCCTTGCTTCACATCCTCTCCTGCACATGCT | + |
|
Preference number: 3 (lower is better) Translates to: FYKFALPTAVKK*SPCFTSSPAHA Trigger: AGCATGTGCAGGAGAGGATGTGAAGCAAGGGGAGCACTTCTTCACTGCTGTTGGGAGAGCAAACTTATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR CCA 72 bp | AGAGCTCATGTCTCTAGCTGCATATGTATCAGAAGATaGCCTAGTAGGCCATCAATGGAAAGAGAGGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RAHVSSCICIRR*PSRPSMEREAH Trigger: ATGGGCCTCTCTTTCCATTGATGGCCTACTAGGCCATCTTCTGATACATATGCAGCTAGAGACATGAGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGTAGGAACTCCAGTGGAGCAATAGAGACAGCAACCTGCCCACAAAATGTTGATACTTTGTTATGCTaGCAGACAGGAGAATATCCT | + |
|
Preference number: 3 (lower is better) Translates to: PGRNSSGAIETATCPQNVDTLLC*QTGEYP Trigger: AGGATATTCTCCTGTCTGCAAGCATAACAAAGTATC...AACATTTTGTGGGCAGGTTGCTGTCTCTATTGCTCCACTGGAGTTCCTACCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR TCA 72 bp | ACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTaGGACGAAAGGATGGACCATCTAGAGATTGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: THGRSYRDKVWS*DERMDHLEIAI Trigger: TATGGCAATCTCTAGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR TCA 72 bp | AAGCATACAAATGGATGGACCTGGAGGGCATCATCCTaGGTGAGGCAACCCAATCACAAAAGAATTCACATG | + |
|
Preference number: 3 (lower is better) Translates to: KHTNGWTWRASS*VRQPNHKRIHM Trigger: CATGTGAATTCTTTTGTGATTGGGTTGCCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGTATGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGTAAGTACCAGTCCCTGACACTATTAATGATACTTTGTTATGCTTGCAGATGTCCCTTTGTCTCATaGCATGGCTGCCTCAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: KGKYQSLTLLMILCYACRCPFVS*HGCLNG Trigger: GCCATTGAGGCAGCCATGCAATGAGACAAAGGGACA...TCTGCAAGCATAACAAAGTATCATTAATAGTGTCAGGGACTGGTACTTACCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTAGGAACTCCAGTGGAGCAATAGAGACAGCAACCTGCCCACAAAATGTTAAATATCTCAGGCTAGCTTaGAACTCAAGATGTAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GRNSSGAIETATCPQNVKYLRLA*NSRCSS Trigger: TGAGCTACATCTTGAGTTCAAAGCTAGCCTGAGATA...TTTAACATTTTGTGGGCAGGTTGCTGTCTCTATTGCTCCACTGGAGTTCCTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGTAGGAACTCCAGTGGAGCAATAGAGACAGCAACCTGCCCACAAAATGTTGCAAACCCACATTGTTaGAAGGGAATGTTTTGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: PGRNSSGAIETATCPQNVANPHC*KGMFCY Trigger: ATAACAAAACATTCCCTTCAAACAATGTGGGTTTGC...AACATTTTGTGGGCAGGTTGCTGTCTCTATTGCTCCACTGGAGTTCCTACCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR TCA 72 bp | CCTTGCTTCACATCCTCTCCTGCACATGCTTTCTCTTaGGTTTTTGATCTTAGCTATTGTGACGGGTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: PCFTSSPAHAFS*VFDLSYCDGCK Trigger: CTTACACCCGTCACAATAGCTAAGATCAAAAACTCAAGAGAAAGCATGTGCAGGAGAGGATGTGAAGCAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR TCA 72 bp | CTATACAACAGTGACATGCTGGTAAGAGGTACTCACTaGTACAATAGTGGCATGGTGATTATGGGGGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: LYNSDMLVRGTH*YNSGMVIMGET Trigger: GGTTTCCCCCATAATCACCATGCCACTATTGTATCAGTGAGTACCTCTTACCAGCATGTCACTGTTGTATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR TCA 72 bp | ACGCTGACACCATTGCATACACTAGCAAGATTTTGCTaGAAGGACCCAGATATAGCTGTCTCTTGTGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: TLTPLHTLARFC*KDPDIAVSCEI Trigger: TATCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR CCA 72 bp | TGTCAACAATGGAAGTCAGCCTTAGGTCAAGAAGGATaGAGGTATAAGATCTCATTTCACATCACAACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CQQWKSALGQEG*RYKISFHITTW Trigger: CCAGGTTGTGATGTGAAATGAGATCTTATACCTCCATCCTTCTTGACCTAAGGCTGACTTCCATTGTTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR CCA 72 bp | GCATATGTATCAGAAGATGGCCTAGTAGGCCATCAATaGAAAGAGAGGCCCATTGGTCATGCAAACTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: AYVSEDGLVGHQ*KERPIGHANFI Trigger: TATAAAGTTTGCATGACCAATGGGCCTCTCTTTCCATTGATGGCCTACTAGGCCATCTTCTGATACATATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR CCA 72 bp | GATAGAGCAGAGTCTGGGGAATGGATAACTAATAACTaGCTCAACTTGAGAACTATTCCAAGGGTAAGTACC | + |
|
Preference number: 3 (lower is better) Translates to: DRAESGEWITNN*LNLRTIPRVST Trigger: GGTACTTACCCTTGGAATAGTTCTCAAGTTGAGCCAGTTATTAGTTATCCATTCCCCAGACTCTGCTCTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR CCA 72 bp | GACAGAGCTGTTACATGTATCAACTTGCAGCATCCATaGTTAGTTGCACATGATCAAGCCAGTCAATATTCC | + |
|
Preference number: 3 (lower is better) Translates to: DRAVTCINLQHP*LVAHDQASQYS Trigger: GGAATATTGACTGGCTTGATCATGTGCAACTAACCATGGATGCTGCAAGTTGATACATGTAACAGCTCTGTC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR CCA 72 bp | AATACAGGCATGAGGGATAGAGCAGAGTCTGGGGAATaGATAACTAATAACTGGCTCAACTTGAGAACTATT | + |
|
Preference number: 3 (lower is better) Translates to: NTGMRDRAESGE*ITNNWLNLRTI Trigger: AATAGTTCTCAAGTTGAGCCAGTTATTAGTTATCCATTCCCCAGACTCTGCTCTATCCCTCATGCCTGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR CCA 72 bp | GAAGTTGCTATGAACATAGTTGAGCAAATGTCTTTGTaGAATGTTGGAGCATCTTTTGGGTATATGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: EVAMNIVEQMSL*NVGASFGYMPR Trigger: CCTGGGCATATACCCAAAAGATGCTCCAACATTCCACAAAGACATTTGCTCAACTATGTTCATAGCAACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTAGTTCACATTATGCCCAAAGGTGATATGCAAGCTGTAAGAGGAGAAAAAAACAAAGACCAAAGCTaGGACACTTTGCCCCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLVHIMPKGDMQAVRGEKNKDQS*DTLPLL Trigger: AAGAAGGGGCAAAGTGTCCAAGCTTTGGTCTTTGTT...TTTTTCTCCTCTTACAGCTTGCATATCACCTTTGGGCATAATGTGAACTAGCAA 41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGTGCTCATATATATTTGGGTCAACTTTATCAACCTCTCACTATTCAGGGAACCAAACAAGGAAGCTaGGATCTCACTTATAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LSAHIYLGQLYQPLTIQGTKQGS*DLTYKG Trigger: TCCCTTATAAGTGAGATCCAAGCTTCCTTGTTTGGT...TCCCTGAATAGTGAGAGGTTGATAAAGTTGACCCAAATATATATGAGCACTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTAGTTCACATTATGCCCAAAGGTGATATGCAAGCTGTAAGAGGAGAAAAAGAAAAGGAAATGAACTaGGGAGTGATATGGGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: LLVHIMPKGDMQAVRGEKEKEMN*GVIWEQ Trigger: CTGTTCCCATATCACTCCCAAGTTCATTTCCTTTTC...TTTTTCTCCTCTTACAGCTTGCATATCACCTTTGGGCATAATGTGAACTAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR TCA 72 bp | TTGCAGGCCAATGGCTGGAATGTGAGAATATCATTGTaGGTGAAATATCCTAGTGCCAAAAGGATATGCATT | + |
|
Preference number: 3 (lower is better) Translates to: LQANGWNVRISL*VKYPSAKRICI Trigger: AATGCATATCCTTTTGGCACTAGGATATTTCACTCACAATGATATTCTCACATTCCAGCCATTGGCCTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR TCA 72 bp | CTCTTTTTCCTTGCTAGTTCACATTATGCCCAAAGGTaGTATGCAAGCTGTAAGAGGAGAAAAAGCACCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LFFLASSHYAQR*YASCKRRKSTN Trigger: ATTGGTGCTTTTTCTCCTCTTACAGCTTGCATATCACCTTTGGGCATAATGTGAACTAGCAAGGAAAAAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR GCA 72 bp | AAACATCATAAGAGGTTCAATGACACCGAGAGCTTATaGATAGCAAAGGTCAGCAAACCCACATTGTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: KHHKRFNDTESL*IAKVSKPTLFE Trigger: TTCAAACAATGTGGGTTTGCTGACCTTTGCTATGCATAAGCTCTCGGTGTCATTGAACCTCTTATGATGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTCATTCCACAGTGGATGTCCAAGCAGTAAGTGAAACTGGCAATATTAATTGCTGTTTTGTCCTATaGATAGCATCCTTTGCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LIHSTVDVQAVSETGNINCCFVL*IASFAL Trigger: TAAGGCAAAGGATGCTATCAATAGGACAAAACAGCA...ATTAATATTGCCAGTTTCACTTACTGCTTGGACATCCACTGTGGAATGAATGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR TCA 72 bp | CACTTCTCTTTCAAAAGATTTGATGTTTTTGAACAATaGGTGACAGTGTGGATGGCCAGCAAATGGTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: HFSFKRFDVFEQ*VTVWMASKWWY Trigger: ATACCACCATTTGCTGGCCATCCACACTGTCACTCATTGTTCAAAAACATCAAATCTTTTGAAAGAGAAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR TCA 72 bp | TTTGGGTTGTTGGTGTCTGACTTCTTGAGTTCTTTGTaGATTTTGGATACTAGCCTCTGTCAGATTCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: FGLLVSDFLSSL*ILDTSLCQIHE Trigger: TTCATGAATCTGACAGAGGCTAGTATCCAAAATTCACAAAGAACTCAAGAAGTCAGACACCAACAACCCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR TCA 72 bp | TTCCATGAGGTCTTATTAATTGTTGATCTTAGAACCTaGGCCATTAGTGTTCTGTTCAGGAAATTGTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FHEVLLIVDLRT*AISVLFRKLSP Trigger: AGGAGACAATTTCCTGAACAGAACACTAATGGCTCAGGTTCTAAGATCAACAATTAATAAGACCTCATGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
||
| 3UTR TCA 72 bp | AAATTTGGTTATTTGGGTTGTTGGTGTCTGACTTCTTaGGTTCTTTGTGAATTTTGGATACTAGCCTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: KFGYLGCWCLTS*VLCEFWILASV Trigger: GACAGAGGCTAGTATCCAAAATTCACAAAGAACTCAAGAAGTCAGACACCAACAACCCAAATAACCAAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR GCA 72 bp | ACGGGTGTAAGATGGAACCTCAAAGTTGTTATGATTTaGATTACCCCGATGATTAATGACTTTGAACATTTC | + |
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Preference number: 3 (lower is better) Translates to: TGVRWNLKVVMI*ITPMINDFEHF Trigger: GAAATGTTCAAAGTCATTAATCATCGGGGTAATGCAAATCATAACAACTTTGAGGTTCCATCTTACACCCGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CCA 72 bp | AGTGTTCTGTTCAGGAAATTGTCTCCTGTACCAATGTaGTCAAGATTATTTCCCAAGAGATTTAGTGTATCT | + |
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Preference number: 3 (lower is better) Translates to: SVLFRKLSPVPM*SRLFPKRFSVS Trigger: AGATACACTAAATCTCTTGGGAAATAATCTTGACCACATTGGTACAGGAGACAATTTCCTGAACAGAACACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR TCA 72 bp | TCTTATGGTCATAGCTCAATAATATGCGTGTTCTTTTaGGACCTTCCTTTTTATTGTAAGCACAGTGTGACA | + |
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Preference number: 3 (lower is better) Translates to: SYGHSSIICVFF*DLPFYCKHSVT Trigger: TGTCACACTGTGCTTACAATAAAAAGGAAGGTCTCAAAAGAACACGCATATTATTGAGCTATGACCATAAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR TCA 72 bp | ATGAAAGAAAAGCAACAAAATATTGATCTCTTGACATaGCAGAGCTGTTACATGTATCAACTTGCAGCATCC | + |
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Preference number: 3 (lower is better) Translates to: MKEKQQNIDLLT*QSCYMYQLAAS Trigger: GGATGCTGCAAGTTGATACATGTAACAGCTCTGTCATGTCAAGAGATCAATATTTTGTTGCTTTTCTTTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CAA 72 bp | GCCAGCAAATGGTGGTATCCTTGTCCCTTTGTCTCATaGCATGGCTGCCTCAATGGCTCCAGGATGGACAAC | + |
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Preference number: 4 (lower is better) Translates to: ASKWWYPCPFVS*HGCLNGSRMDN Trigger: GTTGTCCATCCTGGAGCCATTGAGGCAGCCATGCAATGAGACAAAGGGACAAGGATACCACCATTTGCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CAA 72 bp | TGTGGATGGCCAGCAAATGGTGGTATCCTTGTCCCTTaGTCTCATTGCATGGCTGCCTCAATGGCTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: CGWPANGGILVP*SHCMAASMAPG Trigger: TCCTGGAGCCATTGAGGCAGCCATGCAATGAGACAAAGGGACAAGGATACCACCATTTGCTGGCCATCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CAA 72 bp | AGTGACAGTGTGGATGGCCAGCAAATGGTGGTATCCTaGTCCCTTTGTCTCATTGCATGGCTGCCTCAATGG | + |
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Preference number: 4 (lower is better) Translates to: SDSVDGQQMVVS*SLCLIAWLPQW Trigger: CCATTGAGGCAGCCATGCAATGAGACAAAGGGACAAGGATACCACCATTTGCTGGCCATCCACACTGTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CAA 72 bp | GTTTGCTCTCCCAACAGCAGTGAAGAAGTGCTCCCCTaGCTTCACATCCTCTCCTGCACATGCTTTCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: VCSPNSSEEVLP*LHILSCTCFLL Trigger: CAAGAGAAAGCATGTGCAGGAGAGGATGTGAAGCAAGGGGAGCACTTCTTCACTGCTGTTGGGAGAGCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CAA 72 bp | AATATTCCAGTGCAGATGAAGGAGACCACAAGCCCCTaGGTCCCTAAAGGAGTTACGTTAGGTAGCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: NIPVQMKETTSP*VPKGVTLGSWQ Trigger: CTGCCAGCTACCTAACGTAACTCCTTTAGGGACCAAGGGGCTTGTGGTCTCCTTCATCTGCACTGGAATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| CDS-3UTR GCA 90 bp | CCAGGTAGGAACTCCAGTGGAGCAATAGAGACAGCAACCTGCCCACAAAATGTTACATGCCCAGGAAGATaGCAAATAGAAGAGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PGRNSSGAIETATCPQNVTCPGR*QIEEAA Trigger: AGCAGCCTCTTCTATTTGGCATCTTCCTGGGCATGT...AACATTTTGTGGGCAGGTTGCTGTCTCTATTGCTCCACTGGAGTTCCTACCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| CDS-3UTR TCA 90 bp | AAGGGTAAGTACCAGTCCCTGACACTATTAATGATACTTTGTTATGCTTGCAGATGGGGGATGGCTGTGTaGGCACAGAAAGCCACACGG | + |
|
Preference number: 4 (lower is better) Translates to: KGKYQSLTLLMILCYACRWGMAV*AQKATR Trigger: CCGTGTGGCTTTCTGTGCTCACACAGCCATCCCCCA...TCTGCAAGCATAACAAAGTATCATTAATAGTGTCAGGGACTGGTACTTACCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| CDS-3UTR TCA 90 bp | ATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCTCCCTCTCTGTAGAGTaGGTTGATGGGGGAAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: MEGVTETKFGAETKGWTISLSVE*VDGGSK Trigger: TTTACTTCCCCCATCAACTCACTCTACAGAGAGGGA...GATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| CDS-3UTR GCA 90 bp | GCAGCTCTTGAAACTTCTGCAAGTGTAACCTTTTCAGAAATTGCCTCCATTCAGGTCAGCAGCAGTGTGTaGATAAGGGCAGGACAGTTG | + |
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Preference number: 4 (lower is better) Translates to: AALETSASVTFSEIASIQVSSSV*IRAGQL Trigger: CAACTGTCCTGCCCTTATGCACACACTGCTGCTGAC...CTGAATGGAGGCAATTTCTGAAAAGGTTACACTTGCAGAAGTTTCAAGAGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| CDS-3UTR CCA 90 bp | CTCATTCATTCCACAGTGGATGTCCAAGCAGTAAGTGAAACTGGCAATATTAATAAGAGGCTGCTCCCCTaGCTGTTCAGAGAGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LIHSTVDVQAVSETGNINKRLLP*LFRESQ Trigger: CTGGGACTCTCTGAACAGCCAGGGGAGCAGCCTCTT...ATTAATATTGCCAGTTTCACTTACTGCTTGGACATCCACTGTGGAATGAATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| CDS-3UTR CCA 90 bp | ATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCGTTTCAGCAGAGCACTaGGATCACAGTAGAAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: MEGVTETKFGAETKGWTIVSAEH*DHSRNG Trigger: CCCATTTCTACTGTGATCCCAGTGCTCTGCTGAAAC...GATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| CDS-3UTR TCA 90 bp | ATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCCAGAAGAAGGAAGTCTaGAGCAACAGATTGGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MEGVTETKFGAETKGWTIQKKEV*SNRLVH Trigger: GTGAACCAATCTGTTGCTTCAGACTTCCTTCTTCTG...GATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| CDS-3UTR TCA 90 bp | ATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCAAGCATTTTGGGTACTaGTGCAGAAGTGAAACAGGC | + |
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Preference number: 4 (lower is better) Translates to: MEGVTETKFGAETKGWTIKHFGY*CRSETG Trigger: GCCTGTTTCACTTCTGCATCAGTACCCAAAATGCTT...GATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| CDS-3UTR CCA 90 bp | AAGGGTAAGTACCAGTCCCTGACACTATTAATGATACTTTGTTATGCTTGCAGAAAAGTTGGGGACTCATaGCTGTGCTGTAATGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KGKYQSLTLLMILCYACRKVGDS*LCCNGV Trigger: CACTCCATTACAGCACAGCCATGAGTCCCCAACTTT...TCTGCAAGCATAACAAAGTATCATTAATAGTGTCAGGGACTGGTACTTACCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CAA 72 bp | CTGGTTGATAAGATAAGGACCAAGGATGATATTCTGTaGTCAACAATGGAAGTCAGCCTTAGGTCAAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LVDKIRTKDDIL*STMEVSLRSRR Trigger: CCTTCTTGACCTAAGGCTGACTTCCATTGTTGACAACAGAATATCATCCTTGGTCCTTATCTTATCAACCAG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CAA 72 bp | GGAGTTTGGAGAGGCACAACAAAACAGCACAGGATTTaGTCATTATTCTCAGTAAACCACTGTAACTGGATT | + |
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Preference number: 4 (lower is better) Translates to: GVWRGTTKQHRI*SLFSVNHCNWI Trigger: AATCCAGTTACAGTGGTTTACTGAGAATAATGACAAAATCCTGTGCTGTTTTGTTGTGCCTCTCCAAACTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| CDS-3UTR CCA 90 bp | TTGCTAGTTCACATTATGCCCAAAGGTGATATGCAAGCTGTAAGAGGAGAAAAATCTGGGTATAAATGTTaGCAAGCATTTTGGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: LLVHIMPKGDMQAVRGEKSGYKC*QAFWVL Trigger: CAGTACCCAAAATGCTTGCCAACATTTATACCCAGA...TTTTTCTCCTCTTACAGCTTGCATATCACCTTTGGGCATAATGTGAACTAGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CAA 72 bp | AATGAAGTTGCTATGAACATAGTTGAGCAAATGTCTTaGTGGAATGTTGGAGCATCTTTTGGGTATATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NEVAMNIVEQMS*WNVGASFGYMP Trigger: GGGCATATACCCAAAAGATGCTCCAACATTCCACAAAGACATTTGCTCAACTATGTTCATAGCAACTTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CAA 72 bp | TTATTTCCCAAGAGATTTAGTGTATCTGGTTTTATGTaGAGGCCCTTGACCCAAAACAAAGACATTATGAAT | + |
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Preference number: 4 (lower is better) Translates to: LFPKRFSVSGFM*RPLTQNKDIMN Trigger: ATTCATAATGTCTTTGTTTTGGGTCAAGGGCCTCAACATAAAACCAGATACACTAAATCTCTTGGGAAATAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| 3UTR CAA 72 bp | CCGATGATTAATGACTTTGAACATTTCTTTACATGCTaGGATATTAGAGATTCCTCTGTTGAAAACTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: PMINDFEHFFTC*DIRDSSVENSL Trigger: CAGAGAGTTTTCAACAGAGGAATCTCTAATATCCAAGCATGTAAAGAAATGTTCAAAGTCATTAATCATCGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| CDS-3UTR CAA 90 bp | CCAGGTAGGAACTCCAGTGGAGCAATAGAGACAGCAACCTGCCCACAAAATGTTATAAGGGCAGGACAGTaGGTCAGCACCCAGCATGTA | + |
|
Preference number: 5 (lower is better) Translates to: PGRNSSGAIETATCPQNVIRAGQ*VSTQHV Trigger: TACATGCTGGGTGCTGACCAACTGTCCTGCCCTTAT...AACATTTTGTGGGCAGGTTGCTGTCTCTATTGCTCCACTGGAGTTCCTACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217479.2 |
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| CDS CAA 72 bp | CGGGTCAGCAGCAGTGTGTGCATAAGGGCAGGACAGTaGGTCAGCACCCAGCATGTACACAGCATTAATGCA | + |
|
Preference number: 6 (lower is better) Translates to: RVSSSVCIRAGQ*VSTQHVHSINA Trigger: TGCATTAATGCTGTGTACATGCTGGGTGCTGACCAACTGTCCTGCCCTTATGCACACACTGCTGCTGACCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068475.5 ENSMUST00000217479.2 |
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| CDS CAA 90 bp | AAAGCCACACGGGTCAGCAGCAGTGTGTGCATAAGGGCAGGACAGTaGGTCAGCACCCAGCATGTACACAGCATTAATGCACAAAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: KATRVSSSVCIRAGQ*VSTQHVHSINAQSW Trigger: CCAACTTTGTGCATTAATGCTGTGTACATGCTGGGTGCTGACCAACTGTCCTGCCCTTATGCACACACTGCTGCTGACCCGTGTGGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068475.5 ENSMUST00000217479.2 |
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