Pregenerated sensors for OLFR353 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075382Ensembl transcript IDs: ENSMUST00000100149.2, ENSMUST00000215925.2, ENSMUST00000217215.3
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGCATTCTTCAGGGTCCTGGGGCACTTTGGGAGATCTGAAGAGTTaGGACTCCACCACAGATTCAGAATCTGTGACTATAAGTGTCAGG | + |
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Preference number: 1 (lower is better) Translates to: QHSSGSWGTLGDLKS*DSTTDSESVTISVR Trigger: CCTGACACTTATAGTCACAGATTCTGAATCTGTGGTGGAGTCTCAACTCTTCAGATCTCCCAAAGTGCCCCAGGACCCTGAAGAATGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR GCA 90 bp | AGAACTCCAAATGCAGTGATAGTTATTTTGACTAAGGTGAATTTATaGAAACTTTATATGCCTCAGTACAGGGGAATGCCAGGGCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: RTPNAVIVILTKVNL*KLYMPQYRGMPGPR Trigger: TCTTGGCCCTGGCATTCCCCTGTACTGAGGCATATAAAGTTTGCATAAATTCACCTTAGTCAAAATAACTATCACTGCATTTGGAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR GCA 90 bp | CTATTCTGCATCTCCTGGAATGCATCCTTTACTTCTCTTATAACCTaGACTTACTCCTATGGACATGATGGGTACTTCATAAATTCCATA | + |
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Preference number: 1 (lower is better) Translates to: LFCISWNASFTSLIT*TYSYGHDGYFINSI Trigger: TATGGAATTTATGAAGTACCCATCATGTCCATAGGAGTAAGTGCAGGTTATAAGAGAAGTAAAGGATGCATTCCAGGAGATGCAGAATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR CCA 90 bp | ACAAGTTCAATAACAAATGATTTAAGATGTGTATTACACCATTGGTaGGCTAAGAGTCATCCTGGAGAAAGAGAGCACTCTTCTTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: TSSITNDLRCVLHHW*AKSHPGEREHSSSA Trigger: TGCTGAAGAAGAGTGCTCTCTTTCTCCAGGATGACTCTTAGCCCACCAATGGTGTAATACACATCTTAAATCATTTGTTATTGAACTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR CCA 90 bp | AAAAACTCAATATTGAAGGCAATCCTTCATCTATTCTGCATCTCCTaGAATGCATCCTTTACTTCTCTTATAACCTGCACTTACTCCTAT | + |
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Preference number: 1 (lower is better) Translates to: KNSILKAILHLFCIS*NASFTSLITCTYSY Trigger: ATAGGAGTAAGTGCAGGTTATAAGAGAAGTAAAGGATGCATTCCAGGAGATGCAGAATAGATGAAGGATTGCCTTCAATATTGAGTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCTGTACCCCAGCCTTCCTATCCCCACCTAATTTAAGACTTCCTCTTCCAGCAACAGCCCCTTACTaGCACAGTTATATTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: PSCTPAFLSPPNLRLPLPATAPY*HSYIGE Trigger: CTCCCCAATATAACTGTGGCAGTAAGGGGCTGTTGC...TGGAAGAGGAAGTCTTAAATTAGGTGGGGATAGGAAGGCTGGGGTACAGGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCTGTACCCCAGCCTTCCTATCCCCACCTAATTTAAGACTTCCTCTTCCACTATATGCTCTGAACTaGAACAGCCCCTTACTGCCA | + |
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Preference number: 2 (lower is better) Translates to: PSCTPAFLSPPNLRLPLPLYALN*NSPLLP Trigger: TGGCAGTAAGGGGCTGTTGCAGTTCAGAGCATATAG...TGGAAGAGGAAGTCTTAAATTAGGTGGGGATAGGAAGGCTGGGGTACAGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR CAA 90 bp | TCAGCATTCTTCAGGGTCCTGGGGCACTTTGGGAGATCTGAAGAGTaGAGACTCCACCACAGATTCAGAATCTGTGACTATAAGTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: SAFFRVLGHFGRSEE*RLHHRFRICDYKCQ Trigger: CTGACACTTATAGTCACAGATTCTGAATCTGTGGTGGAGTCTCAACTCTTCAGATCTCCCAAAGTGCCCCAGGACCCTGAAGAATGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCTGTACCCCAGCCTTCCTATCCCCACCTAATTTAAGACTTCCTCTTCCAGTAGTCAAAATCAACTaGAGTCATGGCAAATCCCTG | + |
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Preference number: 2 (lower is better) Translates to: PSCTPAFLSPPNLRLPLPVVKIN*SHGKSL Trigger: CAGGGATTTGCCATGACTGCAGTTGATTTTGACTAC...TGGAAGAGGAAGTCTTAAATTAGGTGGGGATAGGAAGGCTGGGGTACAGGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCTGTACCCCAGCCTTCCTATCCCCACCTAATTTAAGACTTCCTCTTCCAAAGCCAGTATGTAAATaGAGGTTGGTCAGTGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: PSCTPAFLSPPNLRLPLPKPVCK*RLVSVE Trigger: CTCAACACTGACCAACCTGCATTTACATACTGGCTT...TGGAAGAGGAAGTCTTAAATTAGGTGGGGATAGGAAGGCTGGGGTACAGGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCTGTACCCCAGCCTTCCTATCCCCACCTAATTTAAGACTTCCTCTTCCAACTTCTCTTATAACCTaGACTTACTCCTATGGACAT | + |
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Preference number: 2 (lower is better) Translates to: PSCTPAFLSPPNLRLPLPTSLIT*TYSYGH Trigger: ATGTCCATAGGAGTAAGTGCAGGTTATAAGAGAAGT...TGGAAGAGGAAGTCTTAAATTAGGTGGGGATAGGAAGGCTGGGGTACAGGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCTGTACCCCAGCCTTCCTATCCCCACCTAATTTAAGACTTCCTCTTCCACTTAATCTTCAGAGTTaGTGTAACATTTTACACCCT | + |
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Preference number: 2 (lower is better) Translates to: PSCTPAFLSPPNLRLPLPLNLQS*CNILHP Trigger: AGGGTGTAAAATGTTACAGCAACTCTGAAGATTAAG...TGGAAGAGGAAGTCTTAAATTAGGTGGGGATAGGAAGGCTGGGGTACAGGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR CAA 90 bp | AGTATTCTTACCCGGTGGTCCGAGGAAGCTGTAGCATTGAACAGTTaGTTTAGCAGTGGAAATGTTCCAATATCATCCTTGCTGAATCCT | + |
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Preference number: 2 (lower is better) Translates to: SILTRWSEEAVALNS*FSSGNVPISSLLNP Trigger: AGGATTCAGCAAGGATGATATTGGAACATTTCCACTGCTAAACAAACTGTTCAATGCTACAGCTTCCTCGGACCACCGGGTAAGAATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR CAA 90 bp | TGTCCTTTCAGTATTCTTACCCGGTGGTCCGAGGAAGCTGTAGCATaGAACAGTTTGTTTAGCAGTGGAAATGTTCCAATATCATCCTTG | + |
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Preference number: 2 (lower is better) Translates to: CPFSILTRWSEEAVA*NSLFSSGNVPISSL Trigger: CAAGGATGATATTGGAACATTTCCACTGCTAAACAAACTGTTCAATGCTACAGCTTCCTCGGACCACCGGGTAAGAATACTGAAAGGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR CAA 90 bp | GCATTGAACAGTTTGTTTAGCAGTGGAAATGTTCCAATATCATCCTaGCTGAATCCTGTGCAAATCATGGGAAGCTGGACAACCAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: ALNSLFSSGNVPISS*LNPVQIMGSWTTSV Trigger: TACACTGGTTGTCCAGCTTCCCATGATTTGCACAGGATTCAGCAAGGATGATATTGGAACATTTCCACTGCTAAACAAACTGTTCAATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR-3UTR TCA 90 bp | TTCACTTTTCATTTCAGAAGCCAGTATGTAAATGCAGGTTGGTCAGTGTTGAGCCTATTAAGTTCTATCTaGGAGCCAGAGCTTAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: FTFHFRSQYVNAGWSVLSLLSSI*EPELSS Trigger: GGAGCTAAGCTCTGGCTCTCAGATAGAACTTAATAG...GCTCAACACTGACCAACCTGCATTTACATACTGGCTTCTGAAATGAAAAGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCATTTCAGAAGCCAGTATGTAAATGCAGGTTGGTCAGTGTTGAGCAAAGTAATCCCTGAGTTGTCTTaGTCTCCCAAAGGACACCTT | + |
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Preference number: 2 (lower is better) Translates to: FHFRSQYVNAGWSVLSKVIPELS*SPKGHL Trigger: AAGGTGTCCTTTGGGAGATCAAGACAACTCAGGGAT...TACTTTGCTCAACACTGACCAACCTGCATTTACATACTGGCTTCTGAAATGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCATTTCAGAAGCCAGTATGTAAATGCAGGTTGGTCAGTGTTGAGCAAAGTATTACTCCTATGGACATaGTGGGTACTTCATAAATTC | + |
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Preference number: 2 (lower is better) Translates to: FHFRSQYVNAGWSVLSKVLLLWT*WVLHKF Trigger: GAATTTATGAAGTACCCATCATGTCCATAGGAGTAA...TACTTTGCTCAACACTGACCAACCTGCATTTACATACTGGCTTCTGAAATGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCATTTCAGAAGCCAGTATGTAAATGCAGGTTGGTCAGTGTTGAGCAAAGTACAATTTAGCATCTGCTaGTCCAAAGCTCTTCATTTT | + |
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Preference number: 2 (lower is better) Translates to: FHFRSQYVNAGWSVLSKVQFSIC*SKALHF Trigger: AAAATGAAGAGCTTTGGATCAGCAGATGCTAAATTG...TACTTTGCTCAACACTGACCAACCTGCATTTACATACTGGCTTCTGAAATGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR GCA 72 bp | GCAGCATCCCTTGGTGGTCCTCTATATGCTCTGAACTaGAACAGCCCCTTACTGCCACAGTTATATTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: AASLGGPLYALN*NSPLLPQLYWG Trigger: TCCCCAATATAACTGTGGCAGTAAGGGGCTGTTGCAGTTCAGAGCATATAGAGGACCACCAAGGGATGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR TCA 72 bp | AGCATTCTTCAGGGTCCTGGGGCACTTTGGGAGATCTaGAGAGTTGAGACTCCACCACAGATTCAGAATCTG | + |
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Preference number: 3 (lower is better) Translates to: SILQGPGALWEI*RVETPPQIQNL Trigger: CAGATTCTGAATCTGTGGTGGAGTCTCAACTCTTCAGATCTCCCAAAGTGCCCCAGGACCCTGAAGAATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR-3UTR CAA 90 bp | CCCTCCTGTACCCCAGCCTTCCTATCCCCACCTAATTTAAGACTTCCTCTTCCACAGGACAATAATCTCTaGGTTAGCAAGCAATCATTT | + |
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Preference number: 3 (lower is better) Translates to: PSCTPAFLSPPNLRLPLPQDNNL*VSKQSF Trigger: AAATGATTGCTTGCTAACCAAGAGATTATTGTCCTG...TGGAAGAGGAAGTCTTAAATTAGGTGGGGATAGGAAGGCTGGGGTACAGGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR TCA 72 bp | AATCAACTGCAGTCATGGCAAATCCCTGAGTTGTCTTaGTCTCCCAAAGGACACCTTAATCTTCAGAGTTGC | + |
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Preference number: 3 (lower is better) Translates to: NQLQSWQIPELS*SPKGHLNLQSC Trigger: GCAACTCTGAAGATTAAGGTGTCCTTTGGGAGATCAAGACAACTCAGGGATTTGCCATGACTGCAGTTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR TCA 72 bp | TGTTTAGCAGTGGAAATGTTCCAATATCATCCTTGCTaGATCCTGTGCAAATCATGGGAAGCTGGACAACCA | + |
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Preference number: 3 (lower is better) Translates to: CLAVEMFQYHPC*ILCKSWEAGQP Trigger: TGGTTGTCCAGCTTCCCATGATTTGCACAGGATTCAGCAAGGATGATATTGGAACATTTCCACTGCTAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR-3UTR CAA 90 bp | TTTCATTTCAGAAGCCAGTATGTAAATGCAGGTTGGTCAGTGTTGAGCAAAGTAGTTCCAATATCATCCTaGCTGAATCCTGTGCAAATC | + |
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Preference number: 3 (lower is better) Translates to: FHFRSQYVNAGWSVLSKVVPISS*LNPVQI Trigger: GATTTGCACAGGATTCAGCAAGGATGATATTGGAAC...TACTTTGCTCAACACTGACCAACCTGCATTTACATACTGGCTTCTGAAATGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR GCA 72 bp | ATCTCCTGGAATGCATCCTTTACTTCTCTTATAACCTaGACTTACTCCTATGGACATGATGGGTACTTCATA | + |
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Preference number: 3 (lower is better) Translates to: ISWNASFTSLIT*TYSYGHDGYFI Trigger: TATGAAGTACCCATCATGTCCATAGGAGTAAGTGCAGGTTATAAGAGAAGTAAAGGATGCATTCCAGGAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR-3UTR CAA 90 bp | TTCACTTTTCATTTCAGAAGCCAGTATGTAAATGCAGGTTGGTCAGTGTTGAGCACAACAGCAACATCATaGGTTTTGAATACCCACTAT | + |
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Preference number: 3 (lower is better) Translates to: FTFHFRSQYVNAGWSVLSTTATS*VLNTHY Trigger: ATAGTGGGTATTCAAAACCAATGATGTTGCTGTTGT...GCTCAACACTGACCAACCTGCATTTACATACTGGCTTCTGAAATGAAAAGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR CCA 72 bp | ATAACAAATGATTTAAGATGTGTATTACACCATTGGTaGGCTAAGAGTCATCCTGGAGAAAGAGAGCACTCT | + |
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Preference number: 3 (lower is better) Translates to: ITNDLRCVLHHW*AKSHPGEREHS Trigger: AGAGTGCTCTCTTTCTCCAGGATGACTCTTAGCCCACCAATGGTGTAATACACATCTTAAATCATTTGTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR CCA 72 bp | TCAATAACAAATGATTTAAGATGTGTATTACACCATTaGTGGGCTAAGAGTCATCCTGGAGAAAGAGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: SITNDLRCVLHH*WAKSHPGEREH Trigger: GTGCTCTCTTTCTCCAGGATGACTCTTAGCCCACCAATGGTGTAATACACATCTTAAATCATTTGTTATTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR-3UTR CAA 90 bp | TTTCATTTCAGAAGCCAGTATGTAAATGCAGGTTGGTCAGTGTTGAGCAAAGTAGTAGCATTGAACAGTTaGTTTAGCAGTGGAAATGTT | + |
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Preference number: 3 (lower is better) Translates to: FHFRSQYVNAGWSVLSKVVALNS*FSSGNV Trigger: AACATTTCCACTGCTAAACAAACTGTTCAATGCTAC...TACTTTGCTCAACACTGACCAACCTGCATTTACATACTGGCTTCTGAAATGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR TCA 72 bp | CCAGAGCTTAGCTCCAGGCACATAGAAACTACTCTGTaGATACTTGCAGTACAAATGAATTTAAGAGAAATT | + |
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Preference number: 3 (lower is better) Translates to: PELSSRHIETTL*ILAVQMNLREI Trigger: AATTTCTCTTAAATTCATTTGTACTGCAAGTATTCACAGAGTAGTTTCTATGTGCCTGGAGCTAAGCTCTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215925.2 ENSMUST00000217215.3 |
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| 3UTR CCA 72 bp | ACTTTTCATTTCAGAAGCCAGTATGTAAATGCAGGTTaGTCAGTGTTGAGCAAAGTAATAACACATTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: TFHFRSQYVNAG*SVLSKVITHSE Trigger: CTCTGAATGTGTTATTACTTTGCTCAACACTGACCAACCTGCATTTACATACTGGCTTCTGAAATGAAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR TCA 72 bp | TACTTCTCTTATAACCTGCACTTACTCCTATGGACATaGTGGGTACTTCATAAATTCCATATATCGATGGAT | + |
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Preference number: 3 (lower is better) Translates to: YFSYNLHLLLWT*WVLHKFHISMD Trigger: ATCCATCGATATATGGAATTTATGAAGTACCCATCATGTCCATAGGAGTAAGTGCAGGTTATAAGAGAAGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215925.2 ENSMUST00000217215.3 |
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| 3UTR GCA 72 bp | GTTTTTCACTTTTCATTTCAGAAGCCAGTATGTAAATaGAGGTTGGTCAGTGTTGAGCAAAGTAATAACACA | + |
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Preference number: 3 (lower is better) Translates to: VFHFSFQKPVCK*RLVSVEQSNNT Trigger: TGTGTTATTACTTTGCTCAACACTGACCAACCTGCATTTACATACTGGCTTCTGAAATGAAAAGTGAAAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR TCA 72 bp | GAGCATTGGTTACAGCCTATAATTTTTAGAGGTCCATaGAACATCATTGAACAATACCAAAATAGGCAATCT | + |
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Preference number: 3 (lower is better) Translates to: EHWLQPIIFRGP*NIIEQYQNRQS Trigger: AGATTGCCTATTTTGGTATTGTTCAATGATGTTTCATGGACCTCTAAAAATTATAGGCTGTAACCAATGCTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR GCA 72 bp | AAAAACTCAATATTGAAGGCAATCCTTCATCTATTCTaGATCTCCTGGAATGCATCCTTTACTTCTCTTATA | + |
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Preference number: 3 (lower is better) Translates to: KNSILKAILHLF*ISWNASFTSLI Trigger: TATAAGAGAAGTAAAGGATGCATTCCAGGAGATGCAGAATAGATGAAGGATTGCCTTCAATATTGAGTTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| CDS-3UTR CCA 90 bp | CCCTCCTGTACCCCAGCCTTCCTATCCCCACCTAATTTAAGACTTCCTCTTCCACAACATCCTTCTCCGTaGTCTCTCCAGAGGAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: PSCTPAFLSPPNLRLPLPQHPSP*SLQRKG Trigger: TCCCTTCCTCTGGAGAGACCACGGAGAAGGATGTTG...TGGAAGAGGAAGTCTTAAATTAGGTGGGGATAGGAAGGCTGGGGTACAGGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| CDS-3UTR TCA 90 bp | CCCTCCTGTACCCCAGCCTTCCTATCCCCACCTAATTTAAGACTTCCTCTTCCAAGACTCGGGCACTCATaGTTGTGGAATAGTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: PSCTPAFLSPPNLRLPLPRLGHS*LWNSGE Trigger: CTCTCCACTATTCCACAATCATGAGTGCCCGAGTCT...TGGAAGAGGAAGTCTTAAATTAGGTGGGGATAGGAAGGCTGGGGTACAGGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR CAA 72 bp | TTCAGGGTCCTGGGGCACTTTGGGAGATCTGAAGAGTaGAGACTCCACCACAGATTCAGAATCTGTGACTAT | + |
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Preference number: 4 (lower is better) Translates to: FRVLGHFGRSEE*RLHHRFRICDY Trigger: ATAGTCACAGATTCTGAATCTGTGGTGGAGTCTCAACTCTTCAGATCTCCCAAAGTGCCCCAGGACCCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| CDS-3UTR TCA 90 bp | CCCTCCTGTACCCCAGCCTTCCTATCCCCACCTAATTTAAGACTTCCTCTTCCAACTAACTCATTGACATaGGTGTCTGAGCATGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: PSCTPAFLSPPNLRLPLPTNSLT*VSEHES Trigger: GCTTTCATGCTCAGACACTCATGTCAATGAGTTAGT...TGGAAGAGGAAGTCTTAAATTAGGTGGGGATAGGAAGGCTGGGGTACAGGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| CDS-3UTR TCA 90 bp | CCCTCCTGTACCCCAGCCTTCCTATCCCCACCTAATTTAAGACTTCCTCTTCCAAAAGCACTAACTCATTaGCATGAGTGTCTGAGCATG | + |
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Preference number: 4 (lower is better) Translates to: PSCTPAFLSPPNLRLPLPKALTH*HECLSM Trigger: CATGCTCAGACACTCATGTCAATGAGTTAGTGCTTT...TGGAAGAGGAAGTCTTAAATTAGGTGGGGATAGGAAGGCTGGGGTACAGGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR CAA 72 bp | ACCCGGTGGTCCGAGGAAGCTGTAGCATTGAACAGTTaGTTTAGCAGTGGAAATGTTCCAATATCATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: TRWSEEAVALNS*FSSGNVPISSL Trigger: CAAGGATGATATTGGAACATTTCCACTGCTAAACAAACTGTTCAATGCTACAGCTTCCTCGGACCACCGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| CDS-3UTR TCA 90 bp | CATCTATTCTGCATCTCCTGGAATGCATCCTTTACTTCTCTTATAACCTGCACTGTCATGAGGAGAGTGTaGGTCAGGGCAACTATGTTG | + |
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Preference number: 4 (lower is better) Translates to: HLFCISWNASFTSLITCTVMRRV*VRATML Trigger: CAACATAGTTGCCCTGACTCACACTCTCCTCATGAC...AGTGCAGGTTATAAGAGAAGTAAAGGATGCATTCCAGGAGATGCAGAATAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| CDS-3UTR TCA 90 bp | AGCAGTGGAAATGTTCCAATATCATCCTTGCTGAATCCTGTGCAAATCATGGGATGCGGACATAAGAGATaGCAATGCTTACAAAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: SSGNVPISSLLNPVQIMGCGHKR*QCLQRG Trigger: TCCCCTTTGTAAGCATTGTCATCTCTTATGTCCGCA...TCCCATGATTTGCACAGGATTCAGCAAGGATGATATTGGAACATTTCCACTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| CDS-3UTR GCA 90 bp | TTTCATTTCAGAAGCCAGTATGTAAATGCAGGTTGGTCAGTGTTGAGCAAAGTACGTATACATCGCAGCTaGTACAACATCCTTCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: FHFRSQYVNAGWSVLSKVRIHRS*YNILLR Trigger: ACGGAGAAGGATGTTGTAGCAGCTGCGATGTATACG...TACTTTGCTCAACACTGACCAACCTGCATTTACATACTGGCTTCTGAAATGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| CDS-3UTR CCA 90 bp | CATCTATTCTGCATCTCCTGGAATGCATCCTTTACTTCTCTTATAACCTGCACTAACCAGTATAGGAGATaGTATGGCGCTGAGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: HLFCISWNASFTSLITCTNQYRR*YGAESE Trigger: TTCAGACTCAGCGCCATACCATCTCCTATACTGGTT...AGTGCAGGTTATAAGAGAAGTAAAGGATGCATTCCAGGAGATGCAGAATAGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR CAA 72 bp | AGTTTGTTTAGCAGTGGAAATGTTCCAATATCATCCTaGCTGAATCCTGTGCAAATCATGGGAAGCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: SLFSSGNVPISS*LNPVQIMGSWT Trigger: TGTCCAGCTTCCCATGATTTGCACAGGATTCAGCAAGGATGATATTGGAACATTTCCACTGCTAAACAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| CDS-3UTR TCA 90 bp | AGCAGTGGAAATGTTCCAATATCATCCTTGCTGAATCCTGTGCAAATCATGGGAATAAGTACATCTGTGTaGGACAACCAGTATAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SSGNVPISSLLNPVQIMGISTSV*DNQYRR Trigger: TCTCCTATACTGGTTGTCTCACACAGATGTACTTAT...TCCCATGATTTGCACAGGATTCAGCAAGGATGATATTGGAACATTTCCACTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| CDS-3UTR CCA 90 bp | TTCACTTTTCATTTCAGAAGCCAGTATGTAAATGCAGGTTGGTCAGTGTTGAGCCAGACCACACAGAGATaGGAACTACAAGTAGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: FTFHFRSQYVNAGWSVLSQTTQR*ELQVEK Trigger: CTTTTCTACTTGTAGTTCCCATCTCTGTGTGGTCTG...GCTCAACACTGACCAACCTGCATTTACATACTGGCTTCTGAAATGAAAAGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| CDS-3UTR TCA 90 bp | TTCACTTTTCATTTCAGAAGCCAGTATGTAAATGCAGGTTGGTCAGTGTTGAGCCATTCCCAGTCAAGGTaGCAAGATACATACATAGAA | + |
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Preference number: 4 (lower is better) Translates to: FTFHFRSQYVNAGWSVLSHSQSR*QDTYIE Trigger: TTCTATGTATGTATCTTGTCACCTTGACTGGGAATG...GCTCAACACTGACCAACCTGCATTTACATACTGGCTTCTGAAATGAAAAGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| CDS-3UTR TCA 90 bp | CATCTATTCTGCATCTCCTGGAATGCATCCTTTACTTCTCTTATAACCTGCACTGGAACAGATAGACACTaGAGAGTGTTCCATAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: HLFCISWNASFTSLITCTGTDRH*RVFHRK Trigger: TTTTCTATGGAACACTCTTCAGTGTCTATCTGTTCC...AGTGCAGGTTATAAGAGAAGTAAAGGATGCATTCCAGGAGATGCAGAATAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR CAA 72 bp | TTCAGAAGCCAGTATGTAAATGCAGGTTGGTCAGTGTaGAGCAAAGTAATAACACATTCAGAGAATTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: FRSQYVNAGWSV*SKVITHSENFH Trigger: ATGGAAATTCTCTGAATGTGTTATTACTTTGCTCAACACTGACCAACCTGCATTTACATACTGGCTTCTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR CAA 72 bp | CACTTTTCATTTCAGAAGCCAGTATGTAAATGCAGGTaGGTCAGTGTTGAGCAAAGTAATAACACATTCAGA | + |
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Preference number: 4 (lower is better) Translates to: HFSFQKPVCKCR*VSVEQSNNTFR Trigger: TCTGAATGTGTTATTACTTTGCTCAACACTGACCAACCTGCATTTACATACTGGCTTCTGAAATGAAAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR CAA 72 bp | TATTTCCTGAATTGTATTAAAGCCCAGGAGAATGCCTaGAAAGGGGATAACCAAGTTGTATATAACTGTATT | + |
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Preference number: 4 (lower is better) Translates to: YFLNCIKAQENA*KGDNQVVYNCI Trigger: AATACAGTTATATACAACTTGGTTATCCCCTTTCAAGGCATTCTCCTGGGCTTTAATACAATTCAGGAAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| 3UTR CAA 72 bp | ACAATATACTGTGTATGTTGGTTGCTTTGGGTAGGATaGGTTTTTCTACAATATCAAAGAGGGGATTTAGAA | + |
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Preference number: 4 (lower is better) Translates to: TIYCVCWLLWVG*VFLQYQRGDLE Trigger: TTCTAAATCCCCTCTTTGATATTGTAGAAAAACCAATCCTACCCAAAGCAACCAACATACACAGTATATTGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| CDS-3UTR CAA 90 bp | CCCTCCTGTACCCCAGCCTTCCTATCCCCACCTAATTTAAGACTTCCTCTTCCAGTCAGGGCAACTATGTaGGTGAGAACCCAGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: PSCTPAFLSPPNLRLPLPVRATM*VRTQHR Trigger: CCTGTGCTGGGTTCTCACCAACATAGTTGCCCTGAC...TGGAAGAGGAAGTCTTAAATTAGGTGGGGATAGGAAGGCTGGGGTACAGGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| CDS-3UTR CAA 90 bp | CATCTATTCTGCATCTCCTGGAATGCATCCTTTACTTCTCTTATAACCTGCACTTCAGCAAACGACAAGTaGGCCAAAAAGAAGTACATA | + |
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Preference number: 5 (lower is better) Translates to: HLFCISWNASFTSLITCTSANDK*AKKKYI Trigger: TATGTACTTCTTTTTGGCCAACTTGTCGTTTGCTGA...AGTGCAGGTTATAAGAGAAGTAAAGGATGCATTCCAGGAGATGCAGAATAGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217215.3 |
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| CDS TCA 72 bp | CCGTGGTCTCTCCAGAGGAAGGGAACAGATAGACACTaGAGAGTGTTCCATAGAAAACACAGACCACACAGA | + |
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Preference number: 6 (lower is better) Translates to: PWSLQRKGTDRH*RVFHRKHRPHR Trigger: TCTGTGTGGTCTGTGTTTTCTATGGAACACTCTTCAGTGTCTATCTGTTCCCTTCCTCTGGAGAGACCACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100149.2 ENSMUST00000215925.2 ENSMUST00000217215.3 |
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