Pregenerated sensors for OLFR344 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096822Ensembl transcript IDs: ENSMUST00000075474.2, ENSMUST00000215879.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGACCCACACAGGATTCCACACGGGATCCTAAGACCTCTTGTGAGTaGAACACAACTTCTGCCAGGAGGCAGGTTCGAACACCAGATATC | + |
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Preference number: 1 (lower is better) Translates to: GPTQDSTRDPKTSCE*NTTSARRQVRTPDI Trigger: GATATCTGGTGTTCGAACCTGCCTCCTGGCAGAAGTTGTGTTCCACTCACAAGAGGTCTTAGGATCCCGTGTGGAATCCTGTGTGGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR GCA 90 bp | AGATGGCCTAGTTGGCCATCACTGGAAAGAGAGGCCCATTGGACATaGAAACTTTATAAGCCCCAGTACAGGGGAACGCCAGGGCCAAAA | + |
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Preference number: 1 (lower is better) Translates to: RWPSWPSLEREAHWT*KLYKPQYRGTPGPK Trigger: TTTTGGCCCTGGCGTTCCCCTGTACTGGGGCTTATAAAGTTTGCATGTCCAATGGGCCTCTCTTTCCAGTGATGGCCAACTAGGCCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR GCA 90 bp | GTCTCTTGTGAGACTATGCCGGGGTCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTAATGGATGGATGACAGGGCTCCCAATGGAG | + |
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Preference number: 1 (lower is better) Translates to: VSCETMPGSSKHRSG*SQSANGWMTGLPME Trigger: CTCCATTGGGAGCCCTGTCATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGACCCCGGCATAGTCTCACAAGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR GCA 90 bp | AAGAATCTTACTAACAGAAACCAAGACCACTCACCATCATCAGAATaGAGCACAACCACCCCACCTAGTCCTGGGCACCCCAACACACCC | + |
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Preference number: 1 (lower is better) Translates to: KNLTNRNQDHSPSSE*STTTPPSPGHPNTP Trigger: GGGTGTGTTGGGGTGCCCAGGACTAGGTGGGGTGGTTGTGCTGCATTCTGATGATGGTGAGTGGTCTTGGTTTCTGTTAGTAAGATTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CCA 90 bp | GGACCTAGCAAATACATAAGTGGATGCTCACAGTCAGCTACTGGATaGATCACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTATCCAAG | + |
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Preference number: 1 (lower is better) Translates to: GPSKYISGCSQSATG*ITGPPVEELEKVSK Trigger: CTTGGATACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTGATCCATCCAGTAGCTGACTGTGAGCATCCACTTATGTATTTGCTAGGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CCA 90 bp | TGCTGGCAAGGATGTGGAAGAAGAGGAACACTCCCCCATTGTTGGTaGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: CWQGCGRRGTLPHCW*DCKLVQPLWKSVWQ Trigger: CTGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGGGGAGTGTTCCTCTTCTTCCACATCCTTGCCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CCA 90 bp | CCTGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTaGCAAGGATGTGGAAGAAGAGGAACACTCCCCCATTGTTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: PVRMAKIKNSGDSRC*QGCGRRGTLPHCWW Trigger: CCACCAACAATGGGGGAGTGTTCCTCTTCTTCCACATCCTTGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR TCA 90 bp | AGCCTCCAAACGATGACACCATTGCATACACTAGCAAGCGTTTGCTaGAAGGACTCTGATATAGCTGTCTCTTGTGAGACTAGGCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: SLQTMTPLHTLASVC*KDSDIAVSCETRPG Trigger: TCCTGGCCTAGTCTCACAAGAGACAGCTATATCAGAGTCCTTTCAGCAAACGCTTGCTAGTGTATGCAATGGTGTCATCGTTTGGAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CCA 90 bp | CCACTAGTCCCAGCACTTTGTAGGCAGAGGTGGGCTGATCTCTACTaGTTCAAGGCAAACCTTGTCTATATAGCACATTCTAAAGCATCT | + |
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Preference number: 1 (lower is better) Translates to: PLVPALCRQRWADLY*FKANLVYIAHSKAS Trigger: AGATGCTTTAGAATGTGCTATATAGACAAGGTTTGCCTTGAACCAGTAGAGATCAGCCCACCTCTGCCTACAAAGTGCTGGGACTAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CCA 90 bp | ACACTCCCCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTaGAAATCAGTCTGGCAGTTCCTCAGAAAATTGGACATAGTACCA | + |
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Preference number: 1 (lower is better) Translates to: TLPHCWWDCKLVQPL*KSVWQFLRKLDIVP Trigger: TGGTACTATGTCCAATTTTCTGAGGAACTGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGGGGAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CCA 90 bp | CCAAAGAGAGGCAACGCTGGAGATAGAAACCCTAGGAAAGAAATCTaGACCATAGATGCAAGCATCAGCAACAGAATACAAGAGATGGAA | + |
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Preference number: 1 (lower is better) Translates to: PKRGNAGDRNPRKEI*TIDASISNRIQEME Trigger: TTCCATCTCTTGTATTCTGTTGCTGATGCTTGCATCTATGGTCCAGATTTCTTTCCTAGGGTTTCTATCTCCAGCGTTGCCTCTCTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CCA 90 bp | GAAAAGTGTATTACAAAGAAGAGACTGGACAATTCCATGCATGGATaGAGGTCTCAGAATGGTGAGTGCAATGTGTACATAGGAAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: EKCITKKRLDNSMHG*RSQNGECNVYIGSQ Trigger: CTGGCTTCCTATGTACACATTGCACTCACCATTCTGAGACCTCCATCCATGCATGGAATTGTCCAGTCTCTTCTTTGTAATACACTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR TCA 90 bp | AAGGCAGGCCTATCAAAATTACACCAGACTTTTCACCAGACACTATaGAAGACAGAAGAGACTGGACAGATGTTATATAGACACCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: KAGLSKLHQTFHQTL*KTEETGQMLYRHQE Trigger: CTCTTGGTGTCTATATAACATCTGTCCAGTCTCTTCTGTCTTTCATAGTGTCTGGTGAAAAGTCTGGTGTAATTTTGATAGGCCTGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR GCA 90 bp | AAGCATCAGCAACAGAATACAAGAGATGGAAGAGAAAATCTCAGGTaGAGAAGATTCCATAGAGAACATCGGCACAGCAATCAAGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: KHQQQNTRDGRENLR*RRFHREHRHSNQGK Trigger: TTTTCCTTGATTGCTGTGCCGATGTTCTCTATGGAATCTTCTGCACCTGAGATTTTCTCTTCCATCTCTTGTATTCTGTTGCTGATGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CCA 90 bp | AAGTTTGAACACTTTGCCCCTTCTAGAATTGGAAACAATCACCCATaGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACAAAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: KFEHFAPSRIGNNHP*KELQRQSLELRQKD Trigger: ATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGATTGTTTCCAATTCTAGAAGGGGCAAAGTGTTCAAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CCA 90 bp | GAAAAGCTGGTAGTGTATATGAAATTAGAGCAAAGGAGGGAACTATaGTGTTGTCTTAATAGTGGAGGAACAAGGACTGATGGTGATGAT | + |
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Preference number: 1 (lower is better) Translates to: EKLVVYMKLEQRREL*CCLNSGGTRTDGDD Trigger: ATCATCACCATCAGTCCTTGTTCCTCCACTATTAAGACAACACCATAGTTCCCTCCTTTGCTCTAATTTCATATACACTACCAGCTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR TCA 90 bp | TTTCAAGTTTCCAAGTCTAAGGATTCAACTTCACATACAATAGTCTaGGAAAGACATTCACTAACACAGTCAATAGTCTGCTACACATTC | + |
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Preference number: 1 (lower is better) Translates to: FQVSKSKDSTSHTIV*ERHSLTQSIVCYTF Trigger: GAATGTGTAGCAGACTATTGACTGTGTTAGTGAATGTCTTTCTCAGACTATTGTATGTGAAGTTGAATCCTTAGACTTGGAAACTTGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CAA 90 bp | GTTCGAACACCAGATATCTGGGCATCTTCCCTGCATGAGGAGAGCTaGCCTGCAGAGAGTACTCTGACCACTGAAACTAAGGAGAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: VRTPDIWASSLHEES*PAESTLTTETKERA Trigger: TGCTCTCTCCTTAGTTTCAGTGGTCAGAGTACTCTCTGCAGGCAAGCTCTCCTCATGCAGGGAAGATGCCCAGATATCTGGTGTTCGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CAA 90 bp | CAGATGCTGGCAAGGATGTGGAAGAAGAGGAACACTCCCCCATTGTaGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: QMLARMWKKRNTPPL*VGLQACTTTLEISL Trigger: CAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGGGGAGTGTTCCTCTTCTTCCACATCCTTGCCAGCATCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CAA 90 bp | CAGCAGATGCTGGCAAGGATGTGGAAGAAGAGGAACACTCCCCCATaGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGT | + |
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Preference number: 2 (lower is better) Translates to: QQMLARMWKKRNTPP*LVGLQACTTTLEIS Trigger: ACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGGGGAGTGTTCCTCTTCTTCCACATCCTTGCCAGCATCTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CAA 90 bp | CTTGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTCAGAAAATaGGACATAGTACCACCGGAGGTTCCCGAAATACTTCTCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LVQPLWKSVWQFLRK*DIVPPEVPEILLLG Trigger: GCCCAGGAGAAGTATTTCGGGAACCTCCGGTGGTACTATGTCCAATTTTCTGAGGAACTGCCAGACTGATTTCCAGAGTGGTTGTACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR CCA 90 bp | GCTACTGGATGGATCACAGGGCCCCCAGTGGAGGAGCTAGAGAAAGTATCCAAGGGTATGGGGGACTTTTaGGATAGCATTGTAAATGTA | + |
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Preference number: 2 (lower is better) Translates to: ATGWITGPPVEELEKVSKGMGDF*DSIVNV Trigger: TACATTTACAATGCTATCCCAAAAGTCCCCCATACC...CTTGGATACTTTCTCTAGCTCCTCCACTGGGGGCCCTGTGATCCATCCAGTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CAA 90 bp | GTGGAAGAAGAGGAACACTCCCCCATTGTTGGTGGGATTGCAAGCTaGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTCAGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: VEEEEHSPIVGGIAS*YNHSGNQSGSSSEN Trigger: ATTTTCTGAGGAACTGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGGGGAGTGTTCCTCTTCTTCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR GCA 90 bp | GAGATGAACAAAGAATTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGTCAGGTGACAGCAGATaGTGGCAAGGATGTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: EMNKEFSPEEYRMAEKHLSGDSR*WQGCGR Trigger: TCTTCCACATCCTTGCCAGCATCTGCTGTCACCTGA...CAGGTGCTTCTCAGCCATTCGGTATTCCTCAGGTGAGAATTCTTTGTTCATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR CCA 90 bp | GATCTTCCGAAACAAAGAGGTTTCCAATGCCCTTTTCATCACCTAGAACCTGTAGCCAAAACGTGGAAGTaGGTGGGTAGGGGAGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: DLPKQRGFQCPFHHLEPVAKTWK*VGRGVC Trigger: ACACACTCCCCTACCCACCCACTTCCACGTTTTGGC...TACAGGTTCTAGGTGATGAAAAGGGCATTGGAAACCTCTTTGTTTCGGAAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR CCA 90 bp | GAGATGAACAAAGAATTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGAATTCCATGCATGGATaGAGGTCTCAGAATGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: EMNKEFSPEEYRMAEKHLNSMHG*RSQNGE Trigger: CTCACCATTCTGAGACCTCCATCCATGCATGGAATT...CAGGTGCTTCTCAGCCATTCGGTATTCCTCAGGTGAGAATTCTTTGTTCATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR TCA 90 bp | TACACAAACAGGACCCAACATTCTGCTGCTTACAGGAAACCCATCTCAGAGAAAGGGCATCATCCTGAGTaGGGTAACACAATCACAAAA | + |
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Preference number: 2 (lower is better) Translates to: YTNRTQHSAAYRKPISEKGHHPE*GNTITK Trigger: TTTTGTGATTGTGTTACCTCACTCAGGATGATGCCC...TTTCTCTGAGATGGGTTTCCTGTAAGCAGCAGAATGTTGGGTCCTGTTTGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR GCA 90 bp | GTTACACAAACAGGACCCAACATTCTGCTGCTTACAGGAAACCCATCTCAGAGAAATAAGATCAAGCTGTaGATGGTGGTTCATGCCACT | + |
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Preference number: 2 (lower is better) Translates to: VTQTGPNILLLTGNPSQRNKIKL*MVVHAT Trigger: AGTGGCATGAACCACCATGCACAGCTTGATCTTATT...TCTCTGAGATGGGTTTCCTGTAAGCAGCAGAATGTTGGGTCCTGTTTGTGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR GCA 90 bp | GTTACACAAACAGGACCCAACATTCTGCTGCTTACAGGAAACCCATCTCAGAGATCTCAGAATGGTGAGTaGAATGTGTACATAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: VTQTGPNILLLTGNPSQRSQNGE*NVYIGS Trigger: GCTTCCTATGTACACATTGCACTCACCATTCTGAGA...TCTCTGAGATGGGTTTCCTGTAAGCAGCAGAATGTTGGGTCCTGTTTGTGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR TCA 90 bp | GAGATGAACAAAGAATTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGGATCAAGAAAAGAGGTaGAGTGTACAGTCCAAGTTA | + |
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Preference number: 2 (lower is better) Translates to: EMNKEFSPEEYRMAEKHLDQEKR*SVQSKL Trigger: TAACTTGGACTGTACACTTCACCTCTTTTCTTGATC...CAGGTGCTTCTCAGCCATTCGGTATTCCTCAGGTGAGAATTCTTTGTTCATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR CCA 90 bp | TACACAAACAGGACCCAACATTCTGCTGCTTACAGGAAACCCATCTCAGAGAAAGAAAGAGAGGCCCATTaGACAGGCAAACTTTATATG | + |
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Preference number: 2 (lower is better) Translates to: YTNRTQHSAAYRKPISEKEREAH*TGKLYM Trigger: CATATAAAGTTTGCCTGTCCAATGGGCCTCTCTTTC...TTTCTCTGAGATGGGTTTCCTGTAAGCAGCAGAATGTTGGGTCCTGTTTGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR CCA 90 bp | TACACAAACAGGACCCAACATTCTGCTGCTTACAGGAAACCCATCTCAGAGAAAAAATCCTCGAAGATATaGGCACAGGGGAAAAATTCC | + |
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Preference number: 2 (lower is better) Translates to: YTNRTQHSAAYRKPISEKKSSKI*AQGKNS Trigger: GGAATTTTTCCCCTGTGCCCATATCTTCGAGGATTT...TTTCTCTGAGATGGGTTTCCTGTAAGCAGCAGAATGTTGGGTCCTGTTTGTGTA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR TCA 90 bp | GAGATGAACAAAGAATTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGGAAACTGAAGAAGAATaGAGACCAAAGTTTGAACAC | + |
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Preference number: 2 (lower is better) Translates to: EMNKEFSPEEYRMAEKHLETEEE*RPKFEH Trigger: GTGTTCAAACTTTGGTCTTCATTCTTCTTCAGTTTC...CAGGTGCTTCTCAGCCATTCGGTATTCCTCAGGTGAGAATTCTTTGTTCATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCAAATGTAAGAATCTTACTAACAGAAACCAAGACCACTCACCATCATCATCAAGCTGTGCATGGTaGTTCATGCCACTAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: KGKCKNLTNRNQDHSPSSSSCAW*FMPLVP Trigger: TGGGACTAGTGGCATGAACCACCATGCACAGCTTGA...TGATGATGGTGAGTGGTCTTGGTTTCTGTTAGTAAGATTCTTACATTTGCCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR CCA 90 bp | GTTACACAAACAGGACCCAACATTCTGCTGCTTACAGGAAACCCATCTCAGAGATTACAAAGAAGAGACTaGACAATTCCATGCATGGAT | + |
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Preference number: 2 (lower is better) Translates to: VTQTGPNILLLTGNPSQRLQRRD*TIPCMD Trigger: ATCCATGCATGGAATTGTCCAGTCTCTTCTTTGTAA...TCTCTGAGATGGGTTTCCTGTAAGCAGCAGAATGTTGGGTCCTGTTTGTGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCAAATGTAAGAATCTTACTAACAGAAACCAAGACCACTCACCATCATCAATGCTGGCAAGGATGTaGAAGAAGAGGAACACTCCC | + |
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Preference number: 2 (lower is better) Translates to: KGKCKNLTNRNQDHSPSSMLARM*KKRNTP Trigger: GGGAGTGTTCCTCTTCTTCCACATCCTTGCCAGCAT...TGATGATGGTGAGTGGTCTTGGTTTCTGTTAGTAAGATTCTTACATTTGCCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR TCA 90 bp | TACACAAACAGGACCCAACATTCTGCTGCTTACAGGAAACCCATCTCAGAGAAACAAAACACACGAAACTaGAGAAGAATGAAGACCAAA | + |
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Preference number: 2 (lower is better) Translates to: YTNRTQHSAAYRKPISEKQNTRN*RRMKTK Trigger: TTTGGTCTTCATTCTTCTTCAGTTTCGTGTGTTTTG...TTTCTCTGAGATGGGTTTCCTGTAAGCAGCAGAATGTTGGGTCCTGTTTGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGGCAAATGTAAGAATCTTACTAACAGAAACCAAGACCACTCACCATCATCAGATCAAAAATTCAGGTaGCAGCAGATGCTGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: KGKCKNLTNRNQDHSPSSDQKFR*QQMLAR Trigger: CCTTGCCAGCATCTGCTGTCACCTGAATTTTTGATC...TGATGATGGTGAGTGGTCTTGGTTTCTGTTAGTAAGATTCTTACATTTGCCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTTAATAGTGGAGGAACAAGGACTGATGGTGATGATGCAGTATATAGTACAATATGGGGCTCAGAGATaGACAAAGAATTCTCACCTG | + |
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Preference number: 2 (lower is better) Translates to: VLIVEEQGLMVMMQYIVQYGAQR*TKNSHL Trigger: CAGGTGAGAATTCTTTGTTCATCTCTGAGCCCCATA...TTGTACTATATACTGCATCATCACCATCAGTCCTTGTTCCTCCACTATTAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR CCA 90 bp | ATGACAAAACCAAATTCACACATTATCTTTCCACGAATCCAGCCCTTTAAAGGAACACTCCCCCATTGTTaGTGGGATTGCAAGCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: MTKPNSHIIFPRIQPFKGTLPHC*WDCKLV Trigger: TACAAGCTTGCAATCCCACCAACAATGGGGGAGTGT...TCCTTTAAAGGGCTGGATTCGTGGAAAGATAATGTGTGAATTTGGTTTTGTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CAA 90 bp | AAACACACGAAACTGAAGAAGAATGAAGACCAAAGTTTGAACACTTaGCCCCTTCTAGAATTGGAAACAATCACCCATGGAAGGAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: KHTKLKKNEDQSLNT*PLLELETITHGRSY Trigger: GTAACTCCTTCCATGGGTGATTGTTTCCAATTCTAGAAGGGGCAAAGTGTTCAAACTTTGGTCTTCATTCTTCTTCAGTTTCGTGTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTTAATAGTGGAGGAACAAGGACTGATGGTGATGATGCAGTATATAGTACAACAGGGGAAAAATTCCTaGATAGAACATCAGTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: VLIVEEQGLMVMMQYIVQQGKNS*IEHQWL Trigger: AAGCCACTGATGTTCTATTCAGGAATTTTTCCCCTG...TTGTACTATATACTGCATCATCACCATCAGTCCTTGTTCCTCCACTATTAAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTTAATAGTGGAGGAACAAGGACTGATGGTGATGATGCAGTATATAGTACAAAAACTGCAAAGCTTCTaGAAGGCAAAAGACACCATC | + |
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Preference number: 2 (lower is better) Translates to: VLIVEEQGLMVMMQYIVQKLQSF*KAKDTI Trigger: GATGGTGTCTTTTGCCTTGCAGAAGCTTTGCAGTTT...TTGTACTATATACTGCATCATCACCATCAGTCCTTGTTCCTCCACTATTAAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTTAATAGTGGAGGAACAAGGACTGATGGTGATGATGCAGTATATAGTACAACCGAAATACTTCTCCTaGGCATATAGCCAGAAAATG | + |
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Preference number: 2 (lower is better) Translates to: VLIVEEQGLMVMMQYIVQPKYFS*AYSQKM Trigger: CATTTTCTGGCTATATGCCCAGGAGAAGTATTTCGG...TTGTACTATATACTGCATCATCACCATCAGTCCTTGTTCCTCCACTATTAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CAA 90 bp | GATATATGCAAAGGGAAATGCAGGAAGGACTTAAGTGTTTATAAGTaGGAACCCCCTTTCCCAAGATTATCAAGATCAAGAAAAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: DICKGKCRKDLSVYK*EPPFPRLSRSRKEV Trigger: CACCTCTTTTCTTGATCTTGATAATCTTGGGAAAGGGGGTTCCAACTTATAAACACTTAAGTCCTTCCTGCATTTCCCTTTGCATATATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CAA 90 bp | GGCCATTCTAAACACTTTCTTCTGACTTTTACACTTCACATAAACTaGATCTTCCGAAACAAAGAGGTTTCCAATGCCCTTTTCATCACC | + |
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Preference number: 2 (lower is better) Translates to: GHSKHFLLTFTLHIN*IFRNKEVSNALFIT Trigger: GGTGATGAAAAGGGCATTGGAAACCTCTTTGTTTCGGAAGATCAAGTTTATGTGAAGTGTAAAAGTCAGAAGAAAGTGTTTAGAATGGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGACAACTATAACAACTAGCTTTGAAGATTACCAGATGACAAAAGGCAAAAGAGAAGATATTACATaGGCCAAACAAGCAGGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: PETTITTSFEDYQMTKGKREDIT*AKQAGV Trigger: GACTCCTGCTTGTTTGGCCCATGTAATATCTTCTCT...TTTGCCTTTTGTCATCTGGTAATCTTCAAAGCTAGTTGTTATAGTTGTCTCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGACAAAACCAAATTCACACATTATCTTTCCACGAATCCAGCCCTTTAAAGGAAGGCCACCAACAGATTaGGAAAGGATCTTTACCTAT | + |
|
Preference number: 2 (lower is better) Translates to: MTKPNSHIIFPRIQPFKGRPPTD*ERIFTY Trigger: ATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT...TCCTTTAAAGGGCTGGATTCGTGGAAAGATAATGTGTGAATTTGGTTTTGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAGACAACTATAACAACTAGCTTTGAAGATTACCAGATGACAAAAGGCAAAGGTAAGAAGGAAACATaGTCCACTATGTTCATAGCA | + |
|
Preference number: 2 (lower is better) Translates to: PETTITTSFEDYQMTKGKGKKET*STMFIA Trigger: TGCTATGAACATAGTGGAGCATGTTTCCTTCTTACC...TTTGCCTTTTGTCATCTGGTAATCTTCAAAGCTAGTTGTTATAGTTGTCTCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGACAAAACCAAATTCACACATTATCTTTCCACGAATCCAGCCCTTTAAAGGACTCAGAGTGAAATGCTaGAAAACAATTTTCCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: MTKPNSHIIFPRIQPFKGLRVKC*KTIFQA Trigger: TGCTTGGAAAATTGTTTTCCAGCATTTCACTCTGAG...TCCTTTAAAGGGCTGGATTCGTGGAAAGATAATGTGTGAATTTGGTTTTGTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAGAGACAACTATAACAACTAGCTTTGAAGATTACCAGATGACAAAAGGCAAAACAGAATACAAGAGATaGAAGAGAAAATCTCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: PETTITTSFEDYQMTKGKTEYKR*KRKSQV Trigger: CACCTGAGATTTTCTCTTCCATCTCTTGTATTCTGT...TTTGCCTTTTGTCATCTGGTAATCTTCAAAGCTAGTTGTTATAGTTGTCTCTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAGACAACTATAACAACTAGCTTTGAAGATTACCAGATGACAAAAGGCAAAAACCTCAGAGTGAAATaGTGGAAAACAATTTTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: PETTITTSFEDYQMTKGKNLRVK*WKTIFQ Trigger: TTGGAAAATTGTTTTCCAGCATTTCACTCTGAGGTT...TTTGCCTTTTGTCATCTGGTAATCTTCAAAGCTAGTTGTTATAGTTGTCTCTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR CCA 72 bp | ACTTCTGCCAGGAGGCAGGTTCGAACACCAGATATCTaGGCATCTTCCCTGCATGAGGAGAGCTTGCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TSARRQVRTPDI*ASSLHEESLPA Trigger: TGCAGGCAAGCTCTCCTCATGCAGGGAAGATGCCCAGATATCTGGTGTTCGAACCTGCCTCCTGGCAGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR GCA 72 bp | ACTAACAGAAACCAAGACCACTCACCATCATCAGAATaGAGCACAACCACCCCACCTAGTCCTGGGCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: TNRNQDHSPSSE*STTTPPSPGHP Trigger: GGGGTGCCCAGGACTAGGTGGGGTGGTTGTGCTGCATTCTGATGATGGTGAGTGGTCTTGGTTTCTGTTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR GCA 72 bp | TGGAAAGAGAGGCCCATTGGACAGGCAAACTTTATATaGCCCAGTACAAGGGACTGCCAGGGCCAAAACGTG | + |
|
Preference number: 3 (lower is better) Translates to: WKERPIGQANFI*PSTRDCQGQNV Trigger: CACGTTTTGGCCCTGGCAGTCCCTTGTACTGGGGCATATAAAGTTTGCCTGTCCAATGGGCCTCTCTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR GCA 72 bp | GAGACTATGCCGGGGTCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTAATGGATGGATGACAGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: ETMPGSSKHRSG*SQSANGWMTGL Trigger: GAGCCCTGTCATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGACCCCGGCATAGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR CCA 72 bp | TGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTaGACAGGCAAACTTTATATGCCCCAGTACAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WPSRPSLEREAH*TGKLYMPQYKG Trigger: TCCCTTGTACTGGGGCATATAAAGTTTGCCTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR CCA 72 bp | CAGGATTCCACACGGGATCCTAAGACCTCTTGTGAGTaGAACACAACTTCTGCCAGGAGGCAGGTTCGAACA | + |
|
Preference number: 3 (lower is better) Translates to: QDSTRDPKTSCE*NTTSARRQVRT Trigger: TGTTCGAACCTGCCTCCTGGCAGAAGTTGTGTTCCACTCACAAGAGGTCTTAGGATCCCGTGTGGAATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR GCA 72 bp | AGTTGGCCATCACTGGAAAGAGAGGCCCATTGGACATaGAAACTTTATAAGCCCCAGTACAGGGGAACGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SWPSLEREAHWT*KLYKPQYRGTP Trigger: TGGCGTTCCCCTGTACTGGGGCTTATAAAGTTTGCATGTCCAATGGGCCTCTCTTTCCAGTGATGGCCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR CCA 72 bp | TGGCCTAGTTGGCCATCACTGGAAAGAGAGGCCCATTaGACATGCAAACTTTATAAGCCCCAGTACAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WPSWPSLEREAH*TCKLYKPQYRG Trigger: TCCCCTGTACTGGGGCTTATAAAGTTTGCATGTCCAATGGGCCTCTCTTTCCAGTGATGGCCAACTAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR GCA 72 bp | GGAAGAAGAGGAACACTCCCCCATTGTTGGTGGGATTaGAAGCTTGTACAACCACTCTGGAAATCAGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GRRGTLPHCWWD*KLVQPLWKSVW Trigger: CCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGGGGAGTGTTCCTCTTCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR CCA 72 bp | AAATACATAAGTGGATGCTCACAGTCAGCTACTGGATaGATCACAGGGCCCCCAGTGGAGGAGCTAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KYISGCSQSATG*ITGPPVEELEK Trigger: TTTCTCTAGCTCCTCCACTGGGGGCCCTGTGATCCATCCAGTAGCTGACTGTGAGCATCCACTTATGTATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTAATAGTGGAGGAACAAGGACTGATGGTGATGATGCAGTATATAGTACAACAGCACTGGGGTGCCTaGCCAGTGGAGTCTCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VLIVEEQGLMVMMQYIVQQHWGA*PVESPD Trigger: GTCTGGAGACTCCACTGGCAAGGCACCCCAGTGCTG...TTGTACTATATACTGCATCATCACCATCAGTCCTTGTTCCTCCACTATTAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR GCA 72 bp | ACAGACTGGTTACACAAACAGGACCCAACATTCTGCTaGTTACAGGAAACCCATCTCAGAGAAAAGGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TDWLHKQDPTFC*LQETHLREKAR Trigger: TCTGGCCTTTTCTCTGAGATGGGTTTCCTGTAAGCAGCAGAATGTTGGGTCCTGTTTGTGTAACCAGTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR CCA 72 bp | CCAGCACTTTGTAGGCAGAGGTGGGCTGATCTCTACTaGTTCAAGGCAAACCTTGTCTATATAGCACATTCT | + |
|
Preference number: 3 (lower is better) Translates to: PALCRQRWADLY*FKANLVYIAHS Trigger: AGAATGTGCTATATAGACAAGGTTTGCCTTGAACCAGTAGAGATCAGCCCACCTCTGCCTACAAAGTGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR TCA 72 bp | GGACAATTCCATGCATGGATGGAGGTCTCAGAATGGTaGGTGCAATGTGTACATAGGAAGCCAGAAGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: GQFHAWMEVSEW*VQCVHRKPEEI Trigger: GATTTCTTCTGGCTTCCTATGTACACATTGCACTCACCATTCTGAGACCTCCATCCATGCATGGAATTGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR TCA 72 bp | ACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTaGGACAAAAGGATGGACCACATAGAGACTGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: THGRSYRDKVWS*DKRMDHIETAI Trigger: TATGGCAGTCTCTATGTGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR TCA 72 bp | GAGATTGCATTAATTAAGAAAGCAGATAACCTGGCCTaGTCAGGGGCACAAGTCCCTTCTGGTCCACTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: EIALIKKADNLA*SGAQVPSGPLK Trigger: TTTGAGTGGACCAGAAGGGACTTGTGCCCCTGATCAGGCCAGGTTATCTGCTTTCTTAATTAATGCAATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR CCA 72 bp | CATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTaGAAATCAGTCTGGCAGTTCCTCAGAAAATTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: HCWWDCKLVQPL*KSVWQFLRKLD Trigger: GTCCAATTTTCTGAGGAACTGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR TCA 72 bp | AAAGAGATCTGCAACTCTGTAGGTGCAACAACATTATaGACTAACCAGTACCCCAGAGCTCTTGACTCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: KEICNSVGATTL*TNQYPRALDSS Trigger: GCTAGAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGTTGCACCTACAGAGTTGCAGATCTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR TCA 72 bp | ACGATGACACCATTGCATACACTAGCAAGCGTTTGCTaGAAGGACTCTGATATAGCTGTCTCTTGTGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: TMTPLHTLASVC*KDSDIAVSCET Trigger: AGTCTCACAAGAGACAGCTATATCAGAGTCCTTTCAGCAAACGCTTGCTAGTGTATGCAATGGTGTCATCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR CCA 72 bp | CACTTTGCCCCTTCTAGAATTGGAAACAATCACCCATaGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: HFAPSRIGNNHP*KELQRQSLELR Trigger: TCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGATTGTTTCCAATTCTAGAAGGGGCAAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR CCA 72 bp | GGCAACGCTGGAGATAGAAACCCTAGGAAAGAAATCTaGACCATAGATGCAAGCATCAGCAACAGAATACAA | + |
|
Preference number: 3 (lower is better) Translates to: GNAGDRNPRKEI*TIDASISNRIQ Trigger: TTGTATTCTGTTGCTGATGCTTGCATCTATGGTCCAGATTTCTTTCCTAGGGTTTCTATCTCCAGCGTTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR-3UTR CAA 90 bp | GATCTTCCGAAACAAAGAGGTTTCCAATGCCCTTTTCATCACCTAGAACCTGTAAGTATCCCTGAGCTCTaGACTCTAGCTGCATATGTA | + |
|
Preference number: 3 (lower is better) Translates to: DLPKQRGFQCPFHHLEPVSIPEL*TLAAYV Trigger: TACATATGCAGCTAGAGTCAAGAGCTCAGGGATACT...TACAGGTTCTAGGTGATGAAAAGGGCATTGGAAACCTCTTTGTTTCGGAAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR GCA 72 bp | AATTCCATGCATGGATGGAGGTCTCAGAATGGTGAGTaGAATGTGTACATAGGAAGCCAGAAGAAATCAATG | + |
|
Preference number: 3 (lower is better) Translates to: NSMHGWRSQNGE*NVYIGSQKKSM Trigger: CATTGATTTCTTCTGGCTTCCTATGTACACATTGCACTCACCATTCTGAGACCTCCATCCATGCATGGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR CCA 72 bp | TCAGTGGCTTGTGCTGTAAGATCAAGAAATGACAAATaGGACTTCATGAAACTGCAAAGCTTCTGCAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SVACAVRSRNDK*DFMKLQSFCKA Trigger: TGCCTTGCAGAAGCTTTGCAGTTTCATGAAGTCCCATTTGTCATTTCTTGATCTTACAGCACAAGCCACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR CCA 72 bp | GCATATGTATCAAAAGATGGCCTAGTTGGCCATCACTaGAAAGAGAGGCCCATTGGACATGCAAACTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: AYVSKDGLVGHH*KERPIGHANFI Trigger: TATAAAGTTTGCATGTCCAATGGGCCTCTCTTTCCAGTGATGGCCAACTAGGCCATCTTTTGATACATATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR GCA 72 bp | AAAAGTGTATTACAAAGAAGAGACTGGACAATTCCATaGATGGATGGAGGTCTCAGAATGGTGAGTGCAATG | + |
|
Preference number: 3 (lower is better) Translates to: KSVLQRRDWTIP*MDGGLRMVSAM Trigger: CATTGCACTCACCATTCTGAGACCTCCATCCATGCATGGAATTGTCCAGTCTCTTCTTTGTAATACACTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR CCA 72 bp | ATTACAAAGAAGAGACTGGACAATTCCATGCATGGATaGAGGTCTCAGAATGGTGAGTGCAATGTGTACATA | + |
|
Preference number: 3 (lower is better) Translates to: ITKKRLDNSMHG*RSQNGECNVYI Trigger: TATGTACACATTGCACTCACCATTCTGAGACCTCCATCCATGCATGGAATTGTCCAGTCTCTTCTTTGTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGCAAATGTAAGAATCTTACTAACAGAAACCAAGACCACTCACCATCATCAAAGGCCACCAACAGATaGGGAAAGGATCTTTACCTA | + |
|
Preference number: 3 (lower is better) Translates to: KGKCKNLTNRNQDHSPSSKATNR*GKDLYL Trigger: TAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTT...TGATGATGGTGAGTGGTCTTGGTTTCTGTTAGTAAGATTCTTACATTTGCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR GCA 72 bp | ACTGCTGAATTAAATATGAAAAATAAGATCAAGCTGTaGATGGTGGTTCATGCCACTAGTCCCAGCACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TAELNMKNKIKL*MVVHATSPSTL Trigger: CAAAGTGCTGGGACTAGTGGCATGAACCACCATGCACAGCTTGATCTTATTTTTCATATTTAATTCAGCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR CCA 72 bp | TATTATATTTACATCATTTCCACCAGTCTAAACACTTaGGCACCCTACCGTTATAGAGAACAGACTGATGCC | + |
|
Preference number: 3 (lower is better) Translates to: YYIYIISTSLNT*APYRYREQTDA Trigger: GGCATCAGTCTGTTCTCTATAACGGTAGGGTGCCCAAGTGTTTAGACTGGTGGAAATGATGTAAATATAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR GCA 72 bp | CATAAACTTGATCTTCCGAAACAAAGAGGTTTCCAATaGCCTTTTCATCACCTAGAACCTGTATCCATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: HKLDLPKQRGFQ*PFHHLEPVSIL Trigger: CAAAATGGATACAGGTTCTAGGTGATGAAAAGGGCATTGGAAACCTCTTTGTTTCGGAAGATCAAGTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR CCA 72 bp | GGAACTCTCAATTCTGAATATAAGGTCAAAACTAAGTaGATCAAGGAACTCCACATAAAACCAGAGACACTG | + |
|
Preference number: 3 (lower is better) Translates to: GTLNSEYKVKTK*IKELHIKPETL Trigger: CAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCCACTTAGTTTTGACCTTATATTCAGAATTGAGAGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGACAAAACCAAATTCACACATTATCTTTCCACGAATCCAGCCCTTTAAAGGATTAAGTGTTTATAAGTaGGAACCCCCTTTCCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: MTKPNSHIIFPRIQPFKGLSVYK*EPPFPR Trigger: TCTTGGGAAAGGGGGTTCCAACTTATAAACACTTAA...TCCTTTAAAGGGCTGGATTCGTGGAAAGATAATGTGTGAATTTGGTTTTGTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR CCA 72 bp | CTTAATTACCCAATAAAAAGACATAGACTAACAGACTaGTTACACAAACAGGACCCAACATTCTGCTGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LNYPIKRHRLTD*LHKQDPTFCCL Trigger: TAAGCAGCAGAATGTTGGGTCCTGTTTGTGTAACCAGTCTGTTAGTCTATGTCTTTTTATTGGGTAATTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR CAA 72 bp | CCAGATATCTGGGCATCTTCCCTGCATGAGGAGAGCTaGCCTGCAGAGAGTACTCTGACCACTGAAACTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PDIWASSLHEES*PAESTLTTETK Trigger: CTTAGTTTCAGTGGTCAGAGTACTCTCTGCAGGCAAGCTCTCCTCATGCAGGGAAGATGCCCAGATATCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR CAA 72 bp | TGGAAGAAGAGGAACACTCCCCCATTGTTGGTGGGATaGCAAGCTTGTACAACCACTCTGGAAATCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WKKRNTPPLLVG*QACTTTLEISL Trigger: CAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGGGGAGTGTTCCTCTTCTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| CDS-3UTR CCA 90 bp | GAGATGAACAAAGAATTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGAATAACTTGGTTCTCTaGTCGAATGGGGAGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EMNKEFSPEEYRMAEKHLNNLVL*SNGEPQ Trigger: CTGGGGCTCCCCATTCGACCAGAGAACCAAGTTATT...CAGGTGCTTCTCAGCCATTCGGTATTCCTCAGGTGAGAATTCTTTGTTCATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGCAAATGTAAGAATCTTACTAACAGAAACCAAGACCACTCACCATCATCAGGAGCCCCAGGAGGATaGACTCAGACACGGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGKCKNLTNRNQDHSPSSGAPGG*TQTRCS Trigger: AGAGCACCGTGTCTGAGTTCATCCTCCTGGGGCTCC...TGATGATGGTGAGTGGTCTTGGTTTCTGTTAGTAAGATTCTTACATTTGCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| 3UTR CAA 72 bp | CCACTCTGGAAATCAGTCTGGCAGTTCCTCAGAAAATaGGACATAGTACCACCGGAGGTTCCCGAAATACTT | + |
|
Preference number: 4 (lower is better) Translates to: PLWKSVWQFLRK*DIVPPEVPEIL Trigger: AAGTATTTCGGGAACCTCCGGTGGTACTATGTCCAATTTTCTGAGGAACTGCCAGACTGATTTCCAGAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| CDS-3UTR TCA 90 bp | GTTACACAAACAGGACCCAACATTCTGCTGCTTACAGGAAACCCATCTCAGAGAGTGTTGTTTCTAAAGTaGGATAGGCGAGCCAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTQTGPNILLLTGNPSQRVLFLK*DRRAKR Trigger: TCTCTTGGCTCGCCTATCTCACTTTAGAAACAACAC...TCTCTGAGATGGGTTTCCTGTAAGCAGCAGAATGTTGGGTCCTGTTTGTGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| CDS-3UTR TCA 90 bp | GAGATGAACAAAGAATTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGACTGGTGTTATTAGATaGGGGGACACAATACAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EMNKEFSPEEYRMAEKHLTGVIR*GDTIQS Trigger: GGACTGTATTGTGTCCCCTCATCTAATAACACCAGT...CAGGTGCTTCTCAGCCATTCGGTATTCCTCAGGTGAGAATTCTTTGTTCATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| CDS-3UTR CCA 90 bp | GAGATGAACAAAGAATTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGACCTGTCATATGCCATaGAGGTCAGAAGAAAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: EMNKEFSPEEYRMAEKHLTCHMP*RSEESY Trigger: ATAGCTTTCTTCTGACCTCCATGGCATATGACAGGT...CAGGTGCTTCTCAGCCATTCGGTATTCCTCAGGTGAGAATTCTTTGTTCATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| CDS-3UTR CCA 90 bp | TACACAAACAGGACCCAACATTCTGCTGCTTACAGGAAACCCATCTCAGAGAAAACCCATCATATGAAATaGACTGACTGTGTGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YTNRTQHSAAYRKPISEKTHHMK*TDCVSA Trigger: TGCTGACACACAGTCAGTCCATTTCATATGATGGGT...TTTCTCTGAGATGGGTTTCCTGTAAGCAGCAGAATGTTGGGTCCTGTTTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCCAAGACTAATATACTGGCCAAACTCTCAATTACCATAGATGGAGAAACCTTTGCACAAGGGCATTaGCTGAAGATAAGACCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PAKTNILAKLSITIDGETFAQGH*LKIRPR Trigger: TCTGGGTCTTATCTTCAGCCAATGCCCTTGTGCAAA...GGTTTCTCCATCTATGGTAATTGAGAGTTTGGCCAGTATATTAGTCTTGGCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| CDS-3UTR GCA 90 bp | AAAGGCAAATGTAAGAATCTTACTAACAGAAACCAAGACCACTCACCATCATCAGCCAAGAGAAGGGTTTaGACAAGGGCATTGGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: KGKCKNLTNRNQDHSPSSAKRRV*TRALAE Trigger: TTCAGCCAATGCCCTTGTGCAAACCCTTCTCTTGGC...TGATGATGGTGAGTGGTCTTGGTTTCTGTTAGTAAGATTCTTACATTTGCCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| CDS-3UTR GCA 90 bp | GTTTATAAGTTGGAACCCCCTTTCCCAAGATTATCAAGATCAAGAAAAGAGGTGCACATACCTGTCATATaGCATGGAGGTCAGAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: VYKLEPPFPRLSRSRKEVHIPVI*HGGQKK Trigger: TTTCTTCTGACCTCCATGGCATATGACAGGTATGTG...CACCTCTTTTCTTGATCTTGATAATCTTGGGAAAGGGGGTTCCAACTTATAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| CDS-3UTR CCA 90 bp | CCAGCCAAGACTAATATACTGGCCAAACTCTCAATTACCATAGATGGAGAAACCAAGAATGCATATGAATaGCAGGGTAATGACTGCATT | + |
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Preference number: 4 (lower is better) Translates to: PAKTNILAKLSITIDGETKNAYE*QGNDCI Trigger: AATGCAGTCATTACCCTGCCATTCATATGCATTCTT...GGTTTCTCCATCTATGGTAATTGAGAGTTTGGCCAGTATATTAGTCTTGGCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CAA 72 bp | GAACAACATTATGAACTAACCAGTATCCCTGAGCTCTaGACTCTAGCTGCATATGTATCAAAAGATGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: EQHYELTSIPEL*TLAAYVSKDGL Trigger: TAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCAGGGATACTGGTTAGTTCATAATGTTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| CDS-3UTR TCA 90 bp | AAAGGCAAATGTAAGAATCTTACTAACAGAAACCAAGACCACTCACCATCATCAGCATCTTTGGAACTGTaGCTGATGAGAAAGAGATGT | + |
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Preference number: 4 (lower is better) Translates to: KGKCKNLTNRNQDHSPSSASLEL*LMRKRC Trigger: ACATCTCTTTCTCATCAGTCACAGTTCCAAAGATGC...TGATGATGGTGAGTGGTCTTGGTTTCTGTTAGTAAGATTCTTACATTTGCCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CAA 72 bp | AAAGGGAAATGCAGGAAGGACTTAAGTGTTTATAAGTaGGAACCCCCTTTCCCAAGATTATCAAGATCAAGA | + |
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Preference number: 4 (lower is better) Translates to: KGKCRKDLSVYK*EPPFPRLSRSR Trigger: TCTTGATCTTGATAATCTTGGGAAAGGGGGTTCCAACTTATAAACACTTAAGTCCTTCCTGCATTTCCCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| 3UTR CAA 72 bp | AAACTGAAGAAGAATGAAGACCAAAGTTTGAACACTTaGCCCCTTCTAGAATTGGAAACAATCACCCATGGA | + |
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Preference number: 4 (lower is better) Translates to: KLKKNEDQSLNT*PLLELETITHG Trigger: TCCATGGGTGATTGTTTCCAATTCTAGAAGGGGCAAAGTGTTCAAACTTTGGTCTTCATTCTTCTTCAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| CDS-3UTR CAA 90 bp | GAGATGAACAAAGAATTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGAGGATGATAAGATCATaGATGGTGGTGTCTGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: EMNKEFSPEEYRMAEKHLRMIRS*MVVSEL Trigger: CAGCTCAGACACCACCATCAATGATCTTATCATCCT...CAGGTGCTTCTCAGCCATTCGGTATTCCTCAGGTGAGAATTCTTTGTTCATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| CDS-3UTR CAA 90 bp | GTTTATAAGTTGGAACCCCCTTTCCCAAGATTATCAAGATCAAGAAAAGAGGTGGCTTTGCGGATTCCCTaGATGGAGGGAGTTTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: VYKLEPPFPRLSRSRKEVALRIP*MEGVFR Trigger: TCTGAAAACTCCCTCCATCAAGGGAATCCGCAAAGC...CACCTCTTTTCTTGATCTTGATAATCTTGGGAAAGGGGGTTCCAACTTATAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| CDS-3UTR CAA 90 bp | GTCTTAATAGTGGAGGAACAAGGACTGATGGTGATGATGCAGTATATAGTACAAGGAAGAGTAAATAACTaGGTTCTCTGGTCGAATGGG | + |
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Preference number: 5 (lower is better) Translates to: VLIVEEQGLMVMMQYIVQGRVNN*VLWSNG Trigger: CCCATTCGACCAGAGAACCAAGTTATTTACTCTTCC...TTGTACTATATACTGCATCATCACCATCAGTCCTTGTTCCTCCACTATTAAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215879.2 |
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| CDS TCA 90 bp | ATGCCATGGAGGTCAGAAGAAAGCTATCAATGCTTCCAAAAACTATaGAAAAATACACCTGGGAAACACACCCATCATATGAAATGGACT | + |
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Preference number: 5 (lower is better) Translates to: MPWRSEESYQCFQKL*KNTPGKHTHHMKWT Trigger: AGTCCATTTCATATGATGGGTGTGTTTCCCAGGTGTATTTTTTCATAGTTTTTGGAAGCATTGATAGCTTTCTTCTGACCTCCATGGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000075474.2 ENSMUST00000215879.2 |
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| CDS TCA 72 bp | CTTGGTTCTCTGGTCGAATGGGGAGCCCCAGGAGGATaGACTCAGACACGGTGCTCTTATTATCCATCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LGSLVEWGAPGG*TQTRCSYYPSS Trigger: TGAGGATGGATAATAAGAGCACCGTGTCTGAGTTCATCCTCCTGGGGCTCCCCATTCGACCAGAGAACCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075474.2 ENSMUST00000215879.2 |
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| CDS CCA 72 bp | GGTCAGAATCAGGGAAGAGTAAATAACTTGGTTCTCTaGTCGAATGGGGAGCCCCAGGAGGATGAACTCAGA | + |
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Preference number: 6 (lower is better) Translates to: GQNQGRVNNLVL*SNGEPQEDELR Trigger: TCTGAGTTCATCCTCCTGGGGCTCCCCATTCGACCAGAGAACCAAGTTATTTACTCTTCCCTGATTCTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075474.2 ENSMUST00000215879.2 |
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| CDS CCA 72 bp | ATAGGCGAGCCAAGAGAAGGGTTTGCACAAGGGCATTaGCTGAAGATAAGACCCAGAACATTCCTACTAGAA | + |
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Preference number: 6 (lower is better) Translates to: IGEPREGFAQGH*LKIRPRTFLLE Trigger: TTCTAGTAGGAATGTTCTGGGTCTTATCTTCAGCCAATGCCCTTGTGCAAACCCTTCTCTTGGCTCGCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075474.2 ENSMUST00000215879.2 |
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