Pregenerated sensors for OLFR342 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000111869Ensembl transcript IDs: ENSMUST00000074192.5, ENSMUST00000216275.2
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAAACATCTCTATGCCATGTCCCATGGAATCTGACACTCCCTTCTaGACTTTGCAGGCACTCAGCACACACATAGCCCACAGACATACA | + |
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Preference number: 1 (lower is better) Translates to: TNISMPCPMESDTPF*TLQALSTHIAHRHT Trigger: TGTATGTCTGTGGGCTATGTGTGTGCTGAGTGCCTGCAAAGTTCAGAAGGGAGTGTCAGATTCCATGGGACATGGCATAGAGATGTTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR CCA 90 bp | CCTCACATGTATGATGTATTACAAACATCTCTATGCCATGTCCCATaGAATCTGACACTCCCTTCTGAACTTTGCAGGCACTCAGCACAC | + |
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Preference number: 1 (lower is better) Translates to: PHMYDVLQTSLCHVP*NLTLPSELCRHSAH Trigger: GTGTGCTGAGTGCCTGCAAAGTTCAGAAGGGAGTGTCAGATTCCATGGGACATGGCATAGAGATGTTTGTAATACATCATACATGTGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR TCA 90 bp | TGTATGATGTATTACAAACATCTCTATGCCATGTCCCATGGAATCTaGCACTCCCTTCTGAACTTTGCAGGCACTCAGCACACACATAGC | + |
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Preference number: 1 (lower is better) Translates to: CMMYYKHLYAMSHGI*HSLLNFAGTQHTHS Trigger: GCTATGTGTGTGCTGAGTGCCTGCAAAGTTCAGAAGGGAGTGTCAGATTCCATGGGACATGGCATAGAGATGTTTGTAATACATCATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR TCA 90 bp | GCTCTGAAAACCTACTTGAAGTTGATTCAAAGGTTTCAAACTTCTTaGTACCTACCTAGCCATTCTTCATCACACACTCAGAAAATCAGA | + |
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Preference number: 1 (lower is better) Translates to: ALKTYLKLIQRFQTS*YLPSHSSSHTQKIR Trigger: TCTGATTTTCTGAGTGTGTGATGAAGAATGGCTAGGTAGGTATCAAGAAGTTTGAAACCTTTGAATCAACTTCAAGTAGGTTTTCAGAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR-3UTR TCA 90 bp | AGCACCCCTGGAGGCTCATGTCACAGTTCTGCCACTATGATACCTCAGCTTATTGCCAGGAAAAGTGAGTaGAGGAAAGAGCCATGTGGA | + |
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Preference number: 2 (lower is better) Translates to: STPGGSCHSSATMIPQLIARKSE*RKEPCG Trigger: TCCACATGGCTCTTTCCTTCACTCACTTTTCCTGGC...AATAAGCTGAGGTATCATAGTGGCAGAACTGTGACATGAGCCTCCAGGGGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGGACCTTCAAGCCCCACAAAGGGCTTGTCCTTATCCTTGTTTTTATGTTTCTGTGCCAGGAAAAGTaGGTGAAGGAAAGAGCCATG | + |
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Preference number: 2 (lower is better) Translates to: HRTFKPHKGLVLILVFMFLCQEK*VKERAM Trigger: CATGGCTCTTTCCTTCACTCACTTTTCCTGGCACAG...AAACATAAAAACAAGGATAAGGACAAGCCCTTTGTGGGGCTTGAAGGTCCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGGACCTTCAAGCCCCACAAAGGGCTTGTCCTTATCCTTGTTTTTATGTTTCATGTGGAGATTCCCTaGCAGAGAACAAAAGATGGA | + |
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Preference number: 2 (lower is better) Translates to: HRTFKPHKGLVLILVFMFHVEIP*QRTKDG Trigger: TCCATCTTTTGTTCTCTGTCAGGGAATCTCCACATG...AAACATAAAAACAAGGATAAGGACAAGCCCTTTGTGGGGCTTGAAGGTCCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGGACCTTCAAGCCCCACAAAGGGCTTGTCCTTATCCTTGTTTTTATGTTTCCACAGACATACATGTaGGCAAAATACCAATACATA | + |
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Preference number: 2 (lower is better) Translates to: HRTFKPHKGLVLILVFMFPQTYM*AKYQYI Trigger: TATGTATTGGTATTTTGCTCACATGTATGTCTGTGG...AAACATAAAAACAAGGATAAGGACAAGCCCTTTGTGGGGCTTGAAGGTCCTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTTGATTTCCCTCACATGTATGATGTATTACAAACATCTCTATGCCATGTCCAAGGAAAGAGCCATGTaGAGATTCCCTGACAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: GLISLTCMMYYKHLYAMSKERAM*RFPDRE Trigger: TTCTCTGTCAGGGAATCTCCACATGGCTCTTTCCTT...GGACATGGCATAGAGATGTTTGTAATACATCATACATGTGAGGGAAATCAAACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR CAA 90 bp | AGGTACCAAATATTTAAATATATGAACCTCTTGGAGCCATTCTCATaGAAACCACCACACACTGAAAGCAAAGATAAGGGTGTTCTCATC | + |
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Preference number: 2 (lower is better) Translates to: RYQIFKYMNLLEPFS*KPPHTESKDKGVLI Trigger: GATGAGAACACCCTTATCTTTGCTTTCAGTGTGTGGTGGTTTCAATGAGAATGGCTCCAAGAGGTTCATATATTTAAATATTTGGTACCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR CAA 90 bp | ACAGTCACACAAACTAGGTACCAAATATTTAAATATATGAACCTCTaGGAGCCATTCTCATTGAAACCACCACACACTGAAAGCAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: TVTQTRYQIFKYMNL*EPFSLKPPHTESKD Trigger: ATCTTTGCTTTCAGTGTGTGGTGGTTTCAATGAGAATGGCTCCAAGAGGTTCATATATTTAAATATTTGGTACCTAGTTTGTGTGACTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR TCA 72 bp | TCTATGCCATGTCCCATGGAATCTGACACTCCCTTCTaGACTTTGCAGGCACTCAGCACACACATAGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: SMPCPMESDTPF*TLQALSTHIAH Trigger: GTGGGCTATGTGTGTGCTGAGTGCCTGCAAAGTTCAGAAGGGAGTGTCAGATTCCATGGGACATGGCATAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGGAGGCTCATGTCACAGTTCTGCCACTATGATACCTCAGCTTATTTCCTCTAGCCCCACAAAGGGCTaGTCCTTATCCTTGTTTTTA | + |
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Preference number: 3 (lower is better) Translates to: PGGSCHSSATMIPQLISSSPTKG*SLSLFL Trigger: TAAAAACAAGGATAAGGACAAGCCCTTTGTGGGGCT...AGAGGAAATAAGCTGAGGTATCATAGTGGCAGAACTGTGACATGAGCCTCCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR TCA 72 bp | TATTACAAACATCTCTATGCCATGTCCCATGGAATCTaGCACTCCCTTCTGAACTTTGCAGGCACTCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: YYKHLYAMSHGI*HSLLNFAGTQH Trigger: GTGCTGAGTGCCTGCAAAGTTCAGAAGGGAGTGTCAGATTCCATGGGACATGGCATAGAGATGTTTGTAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGGAGGCTCATGTCACAGTTCTGCCACTATGATACCTCAGCTTATTTCCTCTGGCTTGTCCTTATCCTaGTTTTTATGTTTTACAGAG | + |
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Preference number: 3 (lower is better) Translates to: PGGSCHSSATMIPQLISSGLSLS*FLCFTE Trigger: CTCTGTAAAACATAAAAACAAGGATAAGGACAAGCC...AGAGGAAATAAGCTGAGGTATCATAGTGGCAGAACTGTGACATGAGCCTCCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR CCA 72 bp | TATGATGTATTACAAACATCTCTATGCCATGTCCCATaGAATCTGACACTCCCTTCTGAACTTTGCAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: YDVLQTSLCHVP*NLTLPSELCRH Trigger: GTGCCTGCAAAGTTCAGAAGGGAGTGTCAGATTCCATGGGACATGGCATAGAGATGTTTGTAATACATCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR TCA 72 bp | ACCTACTTGAAGTTGATTCAAAGGTTTCAAACTTCTTaGTACCTACCTAGCCATTCTTCATCACACACTCAG | + |
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Preference number: 3 (lower is better) Translates to: TYLKLIQRFQTS*YLPSHSSSHTQ Trigger: CTGAGTGTGTGATGAAGAATGGCTAGGTAGGTATCAAGAAGTTTGAAACCTTTGAATCAACTTCAAGTAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR TCA 72 bp | ACTATAAAAAGTGAAAGAGCAGAAAAGATGGTTCTGTaGTTAAGAGTACTAACTGTTCTCCCAAGAGACACA | + |
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Preference number: 3 (lower is better) Translates to: TIKSERAEKMVL*LRVLTVLPRDT Trigger: TGTGTCTCTTGGGAGAACAGTTAGTACTCTTAATCACAGAACCATCTTTTCTGCTCTTTCACTTTTTATAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| CDS-3UTR GCA 90 bp | CCATGTGGAGATTCCCTGACAGAGAACAAAAGATGGATGGGAGAAGAGGAGAAACAGGCCTTGGTCCTCTaGTCGAATGGGGAGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PCGDSLTENKRWMGEEEKQALVL*SNGEPQ Trigger: CTGGGGCTCCCCATTCGAGCAGAGGACCAAGGCCTG...TTTCTCCTCTTCTCCCATCCATCTTTTGTTCTCTGTCAGGGAATCTCCACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074192.5 ENSMUST00000216275.2 |
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| CDS-3UTR GCA 90 bp | CCATTCTCATTGAAACCACCACACACTGAAAGCAAAGATAAGGGTGTTCTCATCCAGGCCTTGGTCCTCTaGTCGAATGGGGAGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PFSLKPPHTESKDKGVLIQALVL*SNGEPQ Trigger: CTGGGGCTCCCCATTCGAGCAGAGGACCAAGGCCTG...GATGAGAACACCCTTATCTTTGCTTTCAGTGTGTGGTGGTTTCAATGAGAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| CDS-3UTR TCA 90 bp | CCATGTGGAGATTCCCTGACAGAGAACAAAAGATGGATGGGAGAAGAGGAGAAAGGAGCCCCAGGAGGATaGACTCAGACACAGTACTCT | + |
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Preference number: 4 (lower is better) Translates to: PCGDSLTENKRWMGEEEKGAPGG*TQTQYS Trigger: AGAGTACTGTGTCTGAGTTCATCCTCCTGGGGCTCC...TTTCTCCTCTTCTCCCATCCATCTTTTGTTCTCTGTCAGGGAATCTCCACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074192.5 ENSMUST00000216275.2 |
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| CDS-3UTR GCA 90 bp | GCCATGTGGAGATTCCCTGACAGAGAACAAAAGATGGATGGGAGAAGAGGAGAAGCCAAGAGAAGGGTGTaGACAAGGGCATTGCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: AMWRFPDREQKMDGRRGEAKRRV*TRALPE Trigger: TTCAGGCAATGCCCTTGTGCACACCCTTCTCTTGGC...TTCTCCTCTTCTCCCATCCATCTTTTGTTCTCTGTCAGGGAATCTCCACATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074192.5 ENSMUST00000216275.2 |
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| CDS-3UTR CCA 90 bp | GCCATGTGGAGATTCCCTGACAGAGAACAAAAGATGGATGGGAGAAGAGGAGAATGGTGGTGTCTGAGCTaGAGAGTTTCAGCATGGCAG | + |
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Preference number: 4 (lower is better) Translates to: AMWRFPDREQKMDGRRGEWWCLS*RVSAWQ Trigger: CTGCCATGCTGAAACTCTCCAGCTCAGACACCACCA...TTCTCCTCTTCTCCCATCCATCTTTTGTTCTCTGTCAGGGAATCTCCACATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074192.5 ENSMUST00000216275.2 |
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| CDS-3UTR TCA 90 bp | AGCACCCCTGGAGGCTCATGTCACAGTTCTGCCACTATGATACCTCAGCTTATTGCATCTTTGGGGCTGTaGCTGATGAGAAAGAGATGT | + |
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Preference number: 4 (lower is better) Translates to: STPGGSCHSSATMIPQLIASLGL*LMRKRC Trigger: ACATCTCTTTCTCATCAGTCACAGCCCCAAAGATGC...AATAAGCTGAGGTATCATAGTGGCAGAACTGTGACATGAGCCTCCAGGGGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| CDS-3UTR TCA 90 bp | CCATTCTCATTGAAACCACCACACACTGAAAGCAAAGATAAGGGTGTTCTCATCGGAGCCCCAGGAGGATaGACTCAGACACAGTACTCT | + |
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Preference number: 4 (lower is better) Translates to: PFSLKPPHTESKDKGVLIGAPGG*TQTQYS Trigger: AGAGTACTGTGTCTGAGTTCATCCTCCTGGGGCTCC...GATGAGAACACCCTTATCTTTGCTTTCAGTGTGTGGTGGTTTCAATGAGAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| CDS-3UTR TCA 90 bp | GCCATGTGGAGATTCCCTGACAGAGAACAAAAGATGGATGGGAGAAGAGGAGAAGCATCTTTGGGGCTGTaGCTGATGAGAAAGAGATGT | + |
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Preference number: 4 (lower is better) Translates to: AMWRFPDREQKMDGRRGEASLGL*LMRKRC Trigger: ACATCTCTTTCTCATCAGTCACAGCCCCAAAGATGC...TTCTCCTCTTCTCCCATCCATCTTTTGTTCTCTGTCAGGGAATCTCCACATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074192.5 ENSMUST00000216275.2 |
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| CDS-3UTR TCA 90 bp | GCCATGTGGAGATTCCCTGACAGAGAACAAAAGATGGATGGGAGAAGAGGAGAACTTTGCAGATTCCCTTaGTGGAGGGAGTTCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: AMWRFPDREQKMDGRRGELCRFP*WREFSE Trigger: TTCTGAGAACTCCCTCCATCAAGGGAATCTGCAAAG...TTCTCCTCTTCTCCCATCCATCTTTTGTTCTCTGTCAGGGAATCTCCACATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074192.5 ENSMUST00000216275.2 |
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| CDS-3UTR GCA 90 bp | CCATTCTCATTGAAACCACCACACACTGAAAGCAAAGATAAGGGTGTTCTCATCGCCAAGAGAAGGGTGTaGACAAGGGCATTGCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: PFSLKPPHTESKDKGVLIAKRRV*TRALPE Trigger: TTCAGGCAATGCCCTTGTGCACACCCTTCTCTTGGC...GATGAGAACACCCTTATCTTTGCTTTCAGTGTGTGGTGGTTTCAATGAGAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| CDS-3UTR CCA 90 bp | GCCATGTGGAGATTCCCTGACAGAGAACAAAAGATGGATGGGAGAAGAGGAGAATGGAGAGTTTCAGCATaGCAGAGAGGTCACAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: AMWRFPDREQKMDGRRGEWRVSA*QRGHKS Trigger: ACTTTTGTGACCTCTCTGCCATGCTGAAACTCTCCA...TTCTCCTCTTCTCCCATCCATCTTTTGTTCTCTGTCAGGGAATCTCCACATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074192.5 ENSMUST00000216275.2 |
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| CDS-3UTR CCA 90 bp | GCCATGTGGAGATTCCCTGACAGAGAACAAAAGATGGATGGGAGAAGAGGAGAAGCATATGAGATAGATTaGCTATGTGTCAGCATATTC | + |
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Preference number: 4 (lower is better) Translates to: AMWRFPDREQKMDGRRGEAYEID*LCVSIF Trigger: GAATATGCTGACACATAGCCAATCTATCTCATATGC...TTCTCCTCTTCTCCCATCCATCTTTTGTTCTCTGTCAGGGAATCTCCACATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074192.5 ENSMUST00000216275.2 |
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| CDS-3UTR CCA 90 bp | GTATTACAAACATCTCTATGCCATGTCCCATGGAATCTGACACTCCCTTCTGAATGGAGAGTTTCAGCATaGCAGAGAGGTCACAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: VLQTSLCHVPWNLTLPSEWRVSA*QRGHKS Trigger: ACTTTTGTGACCTCTCTGCCATGCTGAAACTCTCCA...TTCAGAAGGGAGTGTCAGATTCCATGGGACATGGCATAGAGATGTTTGTAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| CDS-3UTR CCA 90 bp | CCATGTGGAGATTCCCTGACAGAGAACAAAAGATGGATGGGAGAAGAGGAGAAACAGAATGCATATGAATaGTGGGATAGTGACCATAGT | + |
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Preference number: 4 (lower is better) Translates to: PCGDSLTENKRWMGEEEKQNAYE*WDSDHS Trigger: ACTATGGTCACTATCCCACCATTCATATGCATTCTG...TTTCTCCTCTTCTCCCATCCATCTTTTGTTCTCTGTCAGGGAATCTCCACATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074192.5 ENSMUST00000216275.2 |
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| CDS-3UTR CCA 90 bp | CCATTCTCATTGAAACCACCACACACTGAAAGCAAAGATAAGGGTGTTCTCATCCAGAATGCATATGAATaGTGGGATAGTGACCATAGT | + |
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Preference number: 4 (lower is better) Translates to: PFSLKPPHTESKDKGVLIQNAYE*WDSDHS Trigger: ACTATGGTCACTATCCCACCATTCATATGCATTCTG...GATGAGAACACCCTTATCTTTGCTTTCAGTGTGTGGTGGTTTCAATGAGAATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| CDS-3UTR CCA 90 bp | GGTTTGATTTCCCTCACATGTATGATGTATTACAAACATCTCTATGCCATGTCCGCATATGAGATAGATTaGCTATGTGTCAGCATATTC | + |
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Preference number: 4 (lower is better) Translates to: GLISLTCMMYYKHLYAMSAYEID*LCVSIF Trigger: GAATATGCTGACACATAGCCAATCTATCTCATATGC...GGACATGGCATAGAGATGTTTGTAATACATCATACATGTGAGGGAAATCAAACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR CAA 72 bp | TTAAGAGTACTAACTGTTCTCCCAAGAGACACAGGTTaGATTTCCCTCACATGTATGATGTATTACAAACAT | + |
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Preference number: 4 (lower is better) Translates to: LRVLTVLPRDTG*ISLTCMMYYKH Trigger: ATGTTTGTAATACATCATACATGTGAGGGAAATCAAACCTGTGTCTCTTGGGAGAACAGTTAGTACTCTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR CAA 72 bp | ATATTTAAATATATGAACCTCTTGGAGCCATTCTCATaGAAACCACCACACACTGAAAGCAAAGATAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: IFKYMNLLEPFS*KPPHTESKDKG Trigger: ACCCTTATCTTTGCTTTCAGTGTGTGGTGGTTTCAATGAGAATGGCTCCAAGAGGTTCATATATTTAAATAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR CAA 72 bp | CAAACTAGGTACCAAATATTTAAATATATGAACCTCTaGGAGCCATTCTCATTGAAACCACCACACACTGAA | + |
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Preference number: 4 (lower is better) Translates to: QTRYQIFKYMNL*EPFSLKPPHTE Trigger: TTCAGTGTGTGGTGGTTTCAATGAGAATGGCTCCAAGAGGTTCATATATTTAAATATTTGGTACCTAGTTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| 3UTR CAA 72 bp | TTTACAAATAAAATGGGAAATAAAGTTGGGCATAGGTaGGTCAGTAGTTACCAAACTACAGATAAGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: FTNKMGNKVGHR*VSSYQTTDKQE Trigger: TTCCTGCTTATCTGTAGTTTGGTAACTACTGACCAACCTATGCCCAACTTTATTTCCCATTTTATTTGTAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| CDS-3UTR CAA 90 bp | CCATGTGGAGATTCCCTGACAGAGAACAAAAGATGGATGGGAGAAGAGGAGAAAGGCAGAATACAGGCCTaGGTCCTCTGCTCGAATGGG | + |
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Preference number: 5 (lower is better) Translates to: PCGDSLTENKRWMGEEEKGRIQA*VLCSNG Trigger: CCCATTCGAGCAGAGGACCAAGGCCTGTATTCTGCC...TTTCTCCTCTTCTCCCATCCATCTTTTGTTCTCTGTCAGGGAATCTCCACATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074192.5 ENSMUST00000216275.2 |
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| CDS-3UTR CAA 90 bp | TACCTACCTAGCCATTCTTCATCACACACTCAGAAAATCAGAGCCTCCTTCTTAGGCAGAATACAGGCCTaGGTCCTCTGCTCGAATGGG | + |
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Preference number: 5 (lower is better) Translates to: YLPSHSSSHTQKIRASFLGRIQA*VLCSNG Trigger: CCCATTCGAGCAGAGGACCAAGGCCTGTATTCTGCC...TAAGAAGGAGGCTCTGATTTTCTGAGTGTGTGATGAAGAATGGCTAGGTAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| CDS-3UTR CAA 90 bp | CCATGTGGAGATTCCCTGACAGAGAACAAAAGATGGATGGGAGAAGAGGAGAAAGTGTGCACAAGGGCATaGCCTGAAGATAAGGCCCAA | + |
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Preference number: 5 (lower is better) Translates to: PCGDSLTENKRWMGEEEKVCTRA*PEDKAQ Trigger: TTGGGCCTTATCTTCAGGCAATGCCCTTGTGCACAC...TTTCTCCTCTTCTCCCATCCATCTTTTGTTCTCTGTCAGGGAATCTCCACATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074192.5 ENSMUST00000216275.2 |
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| CDS-3UTR CAA 90 bp | GTATTACAAACATCTCTATGCCATGTCCCATGGAATCTGACACTCCCTTCTGAAGTGTGCACAAGGGCATaGCCTGAAGATAAGGCCCAA | + |
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Preference number: 5 (lower is better) Translates to: VLQTSLCHVPWNLTLPSEVCTRA*PEDKAQ Trigger: TTGGGCCTTATCTTCAGGCAATGCCCTTGTGCACAC...TTCAGAAGGGAGTGTCAGATTCCATGGGACATGGCATAGAGATGTTTGTAATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216275.2 |
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| CDS-3UTR CAA 90 bp | GCCATGTGGAGATTCCCTGACAGAGAACAAAAGATGGATGGGAGAAGAGGAGAAGCCACAATGACATCCTaGTCATTAGTGTTATTAGAT | + |
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Preference number: 5 (lower is better) Translates to: AMWRFPDREQKMDGRRGEATMTS*SLVLLD Trigger: ATCTAATAACACTAATGACAAGGATGTCATTGTGGC...TTCTCCTCTTCTCCCATCCATCTTTTGTTCTCTGTCAGGGAATCTCCACATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074192.5 ENSMUST00000216275.2 |
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| CDS TCA 90 bp | GTACATCAAAGCCACAATGACATCCTTGTCATTAGTGTTATTAGATaGGGGGACAAAATACAGTGCAATTATGGCTCCATAGTACAAGGA | + |
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Preference number: 5 (lower is better) Translates to: VHQSHNDILVISVIR*GDKIQCNYGSIVQG Trigger: TCCTTGTACTATGGAGCCATAATTGCACTGTATTTTGTCCCCTCATCTAATAACACTAATGACAAGGATGTCATTGTGGCTTTGATGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074192.5 ENSMUST00000216275.2 |
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| CDS CAA 72 bp | GATAGTTTAGCCAAGAGAAGGGTGTGCACAAGGGCATaGCCTGAAGATAAGGCCCAAGACACAACTACTAGA | + |
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Preference number: 6 (lower is better) Translates to: DSLAKRRVCTRA*PEDKAQDTTTR Trigger: TCTAGTAGTTGTGTCTTGGGCCTTATCTTCAGGCAATGCCCTTGTGCACACCCTTCTCTTGGCTAAACTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074192.5 ENSMUST00000216275.2 |
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| CDS TCA 72 bp | AGCCACAATGACATCCTTGTCATTAGTGTTATTAGATaGGGGGACAAAATACAGTGCAATTATGGCTCCATA | + |
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Preference number: 6 (lower is better) Translates to: SHNDILVISVIR*GDKIQCNYGSI Trigger: TATGGAGCCATAATTGCACTGTATTTTGTCCCCTCATCTAATAACACTAATGACAAGGATGTCATTGTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074192.5 ENSMUST00000216275.2 |
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