Pregenerated sensors for OLFR341 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075387Ensembl transcript IDs: ENSMUST00000100154.2, ENSMUST00000213300.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGATCTCCTGGGATTCAAGCTATATCTGGGTGTGGGAGGGCATCTaGAGCATCAGTTCTGCCCTGGACCAAGTTGTGGGAAGAACTTTT | + |
|
Preference number: 1 (lower is better) Translates to: WISWDSSYIWVWEGI*SISSALDQVVGRTF Trigger: AAAAGTTCTTCCCACAACTTGGTCCAGGGCAGAACTGATGCTCCAGATGCCCTCCCACACCCAGATATAGCTTGAATCCCAGGAGATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CCA 90 bp | CTGTTGTTTATGTTCTTGTGGTTGCCTCTTGCCATCTGTTTATCTTaGAAGTTAACTGGCCTGGCTGGCTCTGACTGGATCCTGTCCCAC | + |
|
Preference number: 1 (lower is better) Translates to: LLFMFLWLPLAICLS*KLTGLAGSDWILSH Trigger: GTGGGACAGGATCCAGTCAGAGCCAGCCAGGCCAGTTAACTTCCAAGATAAACAGATGGCAAGAGGCAACCACAAGAACATAAACAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CCA 90 bp | GCTATATCTGGGTGTGGGAGGGCATCTGGAGCATCAGTTCTGCCCTaGACCAAGTTGTGGGAAGAACTTTTTGTCTTATTGATTCTTTGC | + |
|
Preference number: 1 (lower is better) Translates to: AISGCGRASGASVLP*TKLWEELFVLLILC Trigger: GCAAAGAATCAATAAGACAAAAAGTTCTTCCCACAACTTGGTCCAGGGCAGAACTGATGCTCCAGATGCCCTCCCACACCCAGATATAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR TCA 90 bp | TGTGTTAGGGTATCCAGTGCTTGTTGTGGTAGGAGAGCTGGGTTCTaGTGTTGCCAAGTGGCATTGTTTTCTGTTGTTTATGTTCTTGTG | + |
|
Preference number: 1 (lower is better) Translates to: CVRVSSACCGRRAGF*CCQVALFSVVYVLV Trigger: CACAAGAACATAAACAACAGAAAACAATGCCACTTGGCAACATCAGAACCCAGCTCTCCTACCACAACAAGCACTGGATACCCTAACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR GCA 90 bp | TCTAATTTCAGCCTACTTCCTTGTGTGAGCCCAGTGACAAGGGTTTaGAAAATTTCCAGAAGCAGCCCAAAAAGCTTTCCATATCCTGTT | + |
|
Preference number: 1 (lower is better) Translates to: SNFSLLPCVSPVTRV*KISRSSPKSFPYPV Trigger: AACAGGATATGGAAAGCTTTTTGGGCTGCTTCTGGAAATTTTGCAAACCCTTGTCACTGGGCTCACACAAGGAAGTAGGCTGAAATTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CCA 90 bp | TGTGTCATTGTGGGTACTGTCTTACGAGCCCACAACCTACCTCTCTaGAAGTCAGTCTTCTTCTTTTTGGCTTCAGAACAAAATGTAGAA | + |
|
Preference number: 1 (lower is better) Translates to: CVIVGTVLRAHNLPL*KSVFFFLASEQNVE Trigger: TTCTACATTTTGTTCTGAAGCCAAAAAGAAGAAGACTGACTTCCAGAGAGGTAGGTTGTGGGCTCGTAAGACAGTACCCACAATGACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CCA 90 bp | TGTGGGAGGGCATCTGGAGCATCAGTTCTGCCCTGGACCAAGTTGTaGGAAGAACTTTTTGTCTTATTGATTCTTTGCATTGATTTTATG | + |
|
Preference number: 1 (lower is better) Translates to: CGRASGASVLPWTKL*EELFVLLILCIDFM Trigger: CATAAAATCAATGCAAAGAATCAATAAGACAAAAAGTTCTTCCCACAACTTGGTCCAGGGCAGAACTGATGCTCCAGATGCCCTCCCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR TCA 90 bp | TTTTTGGCTTCAGAACAAAATGTAGAACTCTCAGATCCTCCTACATaGTGCCTGCCATGCTCCAGCCTTAACGATAATGGAATGAACCTT | + |
|
Preference number: 1 (lower is better) Translates to: FLASEQNVELSDPPT*CLPCSSLNDNGMNL Trigger: AAGGTTCATTCCATTATCGTTAAGGCTGGAGCATGGCAGGCATCATGTAGGAGGATCTGAGAGTTCTACATTTTGTTCTGAAGCCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR GCA 90 bp | AGGATGAGAAAACTGCACATAACTACAGTGCTCCATAGAGGCTTATaGCAAAGTCTTGTTTATAGTTGTGATATACCCTCTTCCCAGGAC | + |
|
Preference number: 1 (lower is better) Translates to: RMRKLHITTVLHRGL*QSLVYSCDIPSSQD Trigger: GTCCTGGGAAGAGGGTATATCACAACTATAAACAAGACTTTGGCATAAGCCTCTATGGAGCACTGTAGTTATGTGCAGTTTTCTCATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR GCA 90 bp | GTCTTGTTTATAGTTGTGATATACCCTCTTCCCAGGACCTTTATGTaGCCCAGAGAGCTTATCCTTGTTTTTATCTTGTACAGGAAACAG | + |
|
Preference number: 1 (lower is better) Translates to: VLFIVVIYPLPRTFM*PRELILVFILYRKQ Trigger: CTGTTTCCTGTACAAGATAAAAACAAGGATAAGCTCTCTGGGGCACATAAAGGTCCTGGGAAGAGGGTATATCACAACTATAAACAAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR TCA 90 bp | TTGCAAAATTTCCAGAAGCAGCCCAAAAAGCTTTCCATATCCTGTTaGGAATTCTGGTATGATTCTGATAGGTCTGCCTTTATATGGTAC | + |
|
Preference number: 1 (lower is better) Translates to: LQNFQKQPKKLSISC*EFWYDSDRSAFIWY Trigger: GTACCATATAAAGGCAGACCTATCAGAATCATACCAGAATTCTCAACAGGATATGGAAAGCTTTTTGGGCTGCTTCTGGAAATTTTGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR TCA 90 bp | TTCACAGAGTCTGTGGCCATTTTTGGAGAGTGTTCTGTAAAGTGCTaGAGTATATTATGTTGTGTTTGGATGAAATGTTCTGCAGATATC | + |
|
Preference number: 1 (lower is better) Translates to: FTESVAIFGECSVKC*SILCCVWMKCSADI Trigger: GATATCTGCAGAACATTTCATCCAAACACAACATAATATACTTCAGCACTTTACAGAACACTCTCCAAAAATGGCCACAGACTCTGTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CCA 90 bp | TTGTACCTGTTGAGATCTGTTTTTCACAGAGTCTGTGGCCATTTTTaGAGAGTGTTCTGTAAAGTGCTGAAGTATATTATGTTGTGTTTG | + |
|
Preference number: 1 (lower is better) Translates to: LYLLRSVFHRVCGHF*RVFCKVLKYIMLCL Trigger: CAAACACAACATAATATACTTCAGCACTTTACAGAACACTCTCCAAAAATGGCCACAGACTCTGTGAAAAACAGATCTCAACAGGTACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGGAGAGAGAGAGCAGAAGTCCAAAGGTCAGGAGAATGAATGGAACAATGCAAAAGTCCCAGATACCTaGGATGGCAGAGGCTCACAG | + |
|
Preference number: 2 (lower is better) Translates to: RGEREQKSKGQENEWNNAKVPDT*DGRGSQ Trigger: CTGTGAGCCTCTGCCATCCCAGGTATCTGGGACTTT...TGCATTGTTCCATTCATTCTCCTGACCTTTGGACTTCTGCTCTCTCTCTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR-3UTR TCA 90 bp | GACCACTTCAACATCAGACACAGAAATGAAGAGTTTGGAGTTTGTGCAGTTGGTTCAGATCCTCCTACATaGTGCCTGCCATGCTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: DHFNIRHRNEEFGVCAVGSDPPT*CLPCSS Trigger: GCTGGAGCATGGCAGGCATCATGTAGGAGGATCTGA...ACCAACTGCACAAACTCCAAACTCTTCATTTCTGTGTCTGATGTTGAAGTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 90 bp | GGGTGTGGGAGGGCATCTGGAGCATCAGTTCTGCCCTGGACCAAGTaGTGGGAAGAACTTTTTGTCTTATTGATTCTTTGCATTGATTTT | + |
|
Preference number: 2 (lower is better) Translates to: GCGRASGASVLPWTK*WEELFVLLILCIDF Trigger: AAAATCAATGCAAAGAATCAATAAGACAAAAAGTTCTTCCCACAACTTGGTCCAGGGCAGAACTGATGCTCCAGATGCCCTCCCACACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAGGGTTTGCAAAATTTCCAGAAGCAGCCCAAAAAGCTTTCCATATCCTGTTGCTGTACAGGGAGAAGTaGGTGAAGAAAGGCAGCCTA | + |
|
Preference number: 2 (lower is better) Translates to: QGFAKFPEAAQKAFHILLLYREK*VKKGSL Trigger: TAGGCTGCCTTTCTTCACTCACTTCTCCCTGTACAG...CAACAGGATATGGAAAGCTTTTTGGGCTGCTTCTGGAAATTTTGCAAACCCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAGGGTTTGCAAAATTTCCAGAAGCAGCCCAAAAAGCTTTCCATATCCTGTTGCAAAGGTCAGGAGAATaGATGGAACAATGCAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: QGFAKFPEAAQKAFHILLQRSGE*MEQCSC Trigger: GCAGCTGCATTGTTCCATTCATTCTCCTGACCTTTG...CAACAGGATATGGAAAGCTTTTTGGGCTGCTTCTGGAAATTTTGCAAACCCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 90 bp | GATGTTGCCAAGTGGCATTGTTTTCTGTTGTTTATGTTCTTGTGGTaGCCTCTTGCCATCTGTTTATCTTGGAAGTTAACTGGCCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: DVAKWHCFLLFMFLW*PLAICLSWKLTGLA Trigger: AGCCAGGCCAGTTAACTTCCAAGATAAACAGATGGCAAGAGGCAACCACAAGAACATAAACAACAGAAAACAATGCCACTTGGCAACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGGGAGAGAGAGAGCAGAAGTCCAAAGGTCAGGAGAATGAATGGAACAATGCAATAGCCATTAAACTCTaGTGTGCTACTCTACAAATG | + |
|
Preference number: 2 (lower is better) Translates to: RGEREQKSKGQENEWNNAIAIKL*CATLQM Trigger: CATTTGTAGAGTAGCACAGCAGAGTTTAATGGCTAT...TGCATTGTTCCATTCATTCTCCTGACCTTTGGACTTCTGCTCTCTCTCTCCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTGGAGTTTGTGCAGTTGGTTTCCTGTCTGGCTTTGGGGATTACAGTTAAGGACAAGATGATTCAGTaGTTAAGAGAACTGAACCCA | + |
|
Preference number: 2 (lower is better) Translates to: SLEFVQLVSCLALGITVKDKMIQ*LRELNP Trigger: TGGGTTCAGTTCTCTTAATCACTGAATCATCTTGTC...CTTAACTGTAATCCCCAAAGCCAGACAGGAAACCAACTGCACAAACTCCAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGGGAGAGAGAGAGCAGAAGTCCAAAGGTCAGGAGAATGAATGGAACAATGCAAGAAGAAAAGGTCTTTaGTATGAAAGCTATGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: RGEREQKSKGQENEWNNARRKGL*YESYEP Trigger: AGGTTCATAGCTTTCATAGCAAAGACCTTTTCTTCT...TGCATTGTTCCATTCATTCTCCTGACCTTTGGACTTCTGCTCTCTCTCTCCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGGGTTTGCAAAATTTCCAGAAGCAGCCCAAAAAGCTTTCCATATCCTGTTCACAACCTACCTCTCTaGAAGTCAGTCTTCTTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: TRVCKISRSSPKSFPYPVHNLPL*KSVFFF Trigger: AAAGAAGAAGACTGACTTCCAGAGAGGTAGGTTGTG...AACAGGATATGGAAAGCTTTTTGGGCTGCTTCTGGAAATTTTGCAAACCCTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAAGGGTTTGCAAAATTTCCAGAAGCAGCCCAAAAAGCTTTCCATATCCTGTTAATGGAATGAACCTTTaGACCTGTAAACTAGCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: TRVCKISRSSPKSFPYPVNGMNL*TCKLAL Trigger: TAGGGCTAGTTTACAGGTTCAAAGGTTCATTCCATT...AACAGGATATGGAAAGCTTTTTGGGCTGCTTCTGGAAATTTTGCAAACCCTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGCTCCATAGAGGCTTATGCCAAAGTCTTGTTTATAGTTGTGATATACCCTCTTGGATAGGCATAGGTTaGTCAGGAAGTACTAAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: VLHRGLCQSLVYSCDIPSWIGIG*SGSTKV Trigger: TACTTTAGTACTTCCTGACCAACCTATGCCTATCCA...AGAGGGTATATCACAACTATAAACAAGACTTTGGCATAAGCCTCTATGGAGCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 90 bp | GGCCATTTTTGGAGAGTGTTCTGTAAAGTGCTGAAGTATATTATGTaGTGTTTGGATGAAATGTTCTGCAGATATCTGTTAGATCCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GHFWRVFCKVLKYIM*CLDEMFCRYLLDPS Trigger: AGAAGGATCTAACAGATATCTGCAGAACATTTCATCCAAACACAACATAATATACTTCAGCACTTTACAGAACACTCTCCAAAAATGGCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 90 bp | CTTCACTCTCTTATATTCCTGTTATCCTTATGTTTGGTCTTTTCATaGTGTCCTGAGTTTCCTGGATATTTTGAGTCAGGAGCTTCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: LHSLIFLLSLCLVFS*CPEFPGYFESGASY Trigger: ATAAGAAGCTCCTGACTCAAAATATCCAGGAAACTCAGGACACAATGAAAAGACCAAACATAAGGATAACAGGAATATAAGAGAGTGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR TCA 72 bp | GGCCTGGCTGGCTCTGACTGGATCCTGTCCCACCTATaGGATTGTGAGCCTGGTTGTGATGGATCTCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GLAGSDWILSHL*DCEPGCDGSPG Trigger: CCCAGGAGATCCATCACAACCAGGCTCACAATCTCATAGGTGGGACAGGATCCAGTCAGAGCCAGCCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CCA 72 bp | GTGGGGGAACCTCTAGAAAGTCCCAGATACCTGGGATaGCAGAGGCTCACAGGACTCAATGGGGGTAACATT | + |
|
Preference number: 3 (lower is better) Translates to: VGEPLESPRYLG*QRLTGLNGGNI Trigger: AATGTTACCCCCATTGAGTCCTGTGAGCCTCTGCCATCCCAGGTATCTGGGACTTTCTAGAGGTTCCCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CCA 72 bp | GAGAGAGAGCAGAAGTCCAAAGGTCAGGAGAATGAATaGAACAATGCAGCTGCCACTGGTAGGAGGTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: EREQKSKGQENE*NNAAATGRRWG Trigger: CCCCCACCTCCTACCAGTGGCAGCTGCATTGTTCCATTCATTCTCCTGACCTTTGGACTTCTGCTCTCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CCA 72 bp | TGGGATTCAAGCTATATCTGGGTGTGGGAGGGCATCTaGAGCATCAGTTCTGCCCTGGACCAAGTTGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WDSSYIWVWEGI*SISSALDQVVG Trigger: TCCCACAACTTGGTCCAGGGCAGAACTGATGCTCCAGATGCCCTCCCACACCCAGATATAGCTTGAATCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR GCA 72 bp | TATCTGGGTGTGGGAGGGCATCTGGAGCATCAGTTCTaGCCTGGACCAAGTTGTGGGAAGAACTTTTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: YLGVGGHLEHQF*PGPSCGKNFLS Trigger: AGACAAAAAGTTCTTCCCACAACTTGGTCCAGGGCAGAACTGATGCTCCAGATGCCCTCCCACACCCAGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCACTGGTAGGAGGTGGGGGAACCTCTAGAAAGTCCCAGATACCTGGGATGCCAGAGAGCTTATCCTaGTTTTTATCTTGTACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LPLVGGGGTSRKSQIPGMPESLS*FLSCTG Trigger: TCCTGTACAAGATAAAAACAAGGATAAGCTCTCTGG...CATCCCAGGTATCTGGGACTTTCTAGAGGTTCCCCCACCTCCTACCAGTGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CCA 72 bp | ATGTTCTTGTGGTTGCCTCTTGCCATCTGTTTATCTTaGAAGTTAACTGGCCTGGCTGGCTCTGACTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: MFLWLPLAICLS*KLTGLAGSDWI Trigger: GATCCAGTCAGAGCCAGCCAGGCCAGTTAACTTCCAAGATAAACAGATGGCAAGAGGCAACCACAAGAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR GCA 72 bp | AGCCTACTTCCTTGTGTGAGCCCAGTGACAAGGGTTTaGAAAATTTCCAGAAGCAGCCCAAAAAGCTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SLLPCVSPVTRV*KISRSSPKSFP Trigger: TGGAAAGCTTTTTGGGCTGCTTCTGGAAATTTTGCAAACCCTTGTCACTGGGCTCACACAAGGAAGTAGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR TCA 72 bp | TCAGTAGTAAAGGATGTGCCTAATCATGTAGAGAATTaGTGCCCCAGAGACAGGGAATGCCTAGGGGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: SVVKDVPNHVEN*CPRDRECLGET Trigger: TGTTTCCCCTAGGCATTCCCTGTCTCTGGGGCATCAATTCTCTACATGATTAGGCACATCCTTTACTACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CCA 72 bp | AGTATATATGGCCTTTTTGGAGGAACTGTGTCATTGTaGGTACTGTCTTACGAGCCCACAACCTACCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SIYGLFGGTVSL*VLSYEPTTYLS Trigger: AGAGAGGTAGGTTGTGGGCTCGTAAGACAGTACCCACAATGACACAGTTCCTCCAAAAAGGCCATATATACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR TCA 72 bp | GTATCCAGTGCTTGTTGTGGTAGGAGAGCTGGGTTCTaGTGTTGCCAAGTGGCATTGTTTTCTGTTGTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: VSSACCGRRAGF*CCQVALFSVVY Trigger: ATAAACAACAGAAAACAATGCCACTTGGCAACATCAGAACCCAGCTCTCCTACCACAACAAGCACTGGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CCA 72 bp | GGAAGTGTAGCCTTCTTGGAGTATATATGGCCTTTTTaGAGGAACTGTGTCATTGTGGGTACTGTCTTACGA | + |
|
Preference number: 3 (lower is better) Translates to: GSVAFLEYIWPF*RNCVIVGTVLR Trigger: TCGTAAGACAGTACCCACAATGACACAGTTCCTCCAAAAAGGCCATATATACTCCAAGAAGGCTACACTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTGGAGTTTGTGCAGTTGGTTTCCTGTCTGGCTTTGGGGATTACAGTTAAGGGAAGTGTAGCCTTCTaGGAGTATATATGGCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLEFVQLVSCLALGITVKGSVAF*EYIWPF Trigger: AAAAGGCCATATATACTCCAAGAAGGCTACACTTCC...CTTAACTGTAATCCCCAAAGCCAGACAGGAAACCAACTGCACAAACTCCAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGGGTTTGCAAAATTTCCAGAAGCAGCCCAAAAAGCTTTCCATATCCTGTTTCCTCTTGGGTGAGCTaGCCTCTTTTTGTTCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TRVCKISRSSPKSFPYPVSSWVS*PLFVLE Trigger: CTCTAGAACAAAAAGAGGCAAGCTCACCCAAGAGGA...AACAGGATATGGAAAGCTTTTTGGGCTGCTTCTGGAAATTTTGCAAACCCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR GCA 72 bp | ACTGAACCCACGTTTGAATTCCAGCACCTATATAGTTaGTCGCAAACATCTGTAAGCCAAATCCTAGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: TEPTFEFQHLYS*SQTSVSQILES Trigger: ACTCTCTAGGATTTGGCTTACAGATGTTTGCGAGCAACTATATAGGTGCTGGAATTCAAACGTGGGTTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CCA 72 bp | GCATCTGGAGCATCAGTTCTGCCCTGGACCAAGTTGTaGGAAGAACTTTTTGTCTTATTGATTCTTTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: ASGASVLPWTKL*EELFVLLILCI Trigger: AATGCAAAGAATCAATAAGACAAAAAGTTCTTCCCACAACTTGGTCCAGGGCAGAACTGATGCTCCAGATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CCA 72 bp | ACAAAGAGATCAAACAAAGCAGTAAACACAGCCCTGTaGTCACTGTTTCCAAGGGCATATCAGAATGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: TKRSNKAVNTAL*SLFPRAYQNDQ Trigger: TTGGTCATTCTGATATGCCCTTGGAAACAGTGACCACAGGGCTGTGTTTACTGCTTTGTTTGATCTCTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTGGAGTTTGTGCAGTTGGTTTCCTGTCTGGCTTTGGGGATTACAGTTAAGGCACTTTTAATATTGTaGAGACTGCTGTACCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: SLEFVQLVSCLALGITVKALLIL*RLLYHG Trigger: TCCATGGTACAGCAGTCTCAACAATATTAAAAGTGC...CTTAACTGTAATCCCCAAAGCCAGACAGGAAACCAACTGCACAAACTCCAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR TCA 72 bp | TTCCAGAAGCAGCCCAAAAAGCTTTCCATATCCTGTTaGGAATTCTGGTATGATTCTGATAGGTCTGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: FQKQPKKLSISC*EFWYDSDRSAF Trigger: AAAGGCAGACCTATCAGAATCATACCAGAATTCTCAACAGGATATGGAAAGCTTTTTGGGCTGCTTCTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR GCA 72 bp | TTGTTTTCTGTTGTTTATGTTCTTGTGGTTGCCTCTTaGCATCTGTTTATCTTGGAAGTTAACTGGCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LFSVVYVLVVAS*HLFILEVNWPG Trigger: GCCAGGCCAGTTAACTTCCAAGATAAACAGATGGCAAGAGGCAACCACAAGAACATAAACAACAGAAAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CCA 72 bp | ACACAATTAGGAAGTGTAGCCTTCTTGGAGTATATATaGCCTTTTTGGAGGAACTGTGTCATTGTGGGTACT | + |
|
Preference number: 3 (lower is better) Translates to: TQLGSVAFLEYI*PFWRNCVIVGT Trigger: AGTACCCACAATGACACAGTTCCTCCAAAAAGGCCATATATACTCCAAGAAGGCTACACTTCCTAATTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGGGTTTGCAAAATTTCCAGAAGCAGCCCAAAAAGCTTTCCATATCCTGTTTCTGTAACATTGACTTaGCCTTGGAAACTCCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TRVCKISRSSPKSFPYPVSVTLT*PWKLQE Trigger: TTCCTGGAGTTTCCAAGGCAAAGTCAATGTTACAGA...AACAGGATATGGAAAGCTTTTTGGGCTGCTTCTGGAAATTTTGCAAACCCTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGGTTTGCAAAATTTCCAGAAGCAGCCCAAAAAGCTTTCCATATCCTGTTGTTTATGTTCTTGTGGTaGCCTCTTGCCATCTGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: QGFAKFPEAAQKAFHILLFMFLW*PLAICL Trigger: TAAACAGATGGCAAGAGGCAACCACAAGAACATAAA...CAACAGGATATGGAAAGCTTTTTGGGCTGCTTCTGGAAATTTTGCAAACCCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR-3UTR CAA 90 bp | GACCACTTCAACATCAGACACAGAAATGAAGAGTTTGGAGTTTGTGCAGTTGGTTGGACAAAATGTATTTaGCATTATGCTATGCTTCGG | + |
|
Preference number: 3 (lower is better) Translates to: DHFNIRHRNEEFGVCAVGWTKCI*HYAMLR Trigger: CCGAAGCATAGCATAATGCAAAATACATTTTGTCCA...ACCAACTGCACAAACTCCAAACTCTTCATTTCTGTGTCTGATGTTGAAGTGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGGGTTTGCAAAATTTCCAGAAGCAGCCCAAAAAGCTTTCCATATCCTGTTTCTCTCTTCTATCTCTaGTATTCTGTTGGTGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TRVCKISRSSPKSFPYPVSLFYL*YSVGEA Trigger: AGCTTCACCAACAGAATACAAGAGATAGAAGAGAGA...AACAGGATATGGAAAGCTTTTTGGGCTGCTTCTGGAAATTTTGCAAACCCTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR TCA 72 bp | CCATGCTCCAGCCTTAACGATAATGGAATGAACCTTTaGACCTGTAAACTAGCCCTAATTAAATATTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PCSSLNDNGMNL*TCKLALIKYCP Trigger: AGGACAATATTTAATTAGGGCTAGTTTACAGGTTCAAAGGTTCATTCCATTATCGTTAAGGCTGGAGCATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR GCA 72 bp | AAACTGCACATAACTACAGTGCTCCATAGAGGCTTATaGCAAAGTCTTGTTTATAGTTGTGATATACCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: KLHITTVLHRGL*QSLVYSCDIPS Trigger: AGAGGGTATATCACAACTATAAACAAGACTTTGGCATAAGCCTCTATGGAGCACTGTAGTTATGTGCAGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR TCA 72 bp | GAGAGTGAGGTATTGAAGTCTCCCACTATCAATGCATaGGGGTTGATTTATACTTTAGTAGTATTCCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: ESEVLKSPTINA*GLIYTLVVFLL Trigger: TAAGAGGAATACTACTAAAGTATAAATCAACCCTCATGCATTGATAGTGGGAGACTTCAATACCTCACTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CCA 72 bp | TTGAGATCTGTTTTTCACAGAGTCTGTGGCCATTTTTaGAGAGTGTTCTGTAAAGTGCTGAAGTATATTATG | + |
|
Preference number: 3 (lower is better) Translates to: LRSVFHRVCGHF*RVFCKVLKYIM Trigger: CATAATATACTTCAGCACTTTACAGAACACTCTCCAAAAATGGCCACAGACTCTGTGAAAAACAGATCTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR TCA 72 bp | TCTGTGGCCATTTTTGGAGAGTGTTCTGTAAAGTGCTaGAGTATATTATGTTGTGTTTGGATGAAATGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SVAIFGECSVKC*SILCCVWMKCS Trigger: AGAACATTTCATCCAAACACAACATAATATACTTCAGCACTTTACAGAACACTCTCCAAAAATGGCCACAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| CDS-3UTR TCA 90 bp | AAGAGCATACAGGGCCTGGTCCACGGCCCTCAATACACATATAGCAGAGGTCTGCAAACAACAGAGAGGTaGGAACCACACGTGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSIQGLVHGPQYTYSRGLQTTER*EPHVDK Trigger: CTTGTCCACGTGTGGTTCTCACCTCTCTGTTGTTTG...CAGACCTCTGCTATATGTGTATTGAGGGCCGTGGACCAGGCCCTGTATGCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCACTGGTAGGAGGTGGGGGAACCTCTAGAAAGTCCCAGATACCTGGGATGAACCAGCATATGAGATaGACTGACTGTGTGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPLVGGGGTSRKSQIPGMNQHMR*TDCVSA Trigger: TGCTGACACACAGTCAGTCCATCTCATATGCTGGTT...CATCCCAGGTATCTGGGACTTTCTAGAGGTTCCCCCACCTCCTACCAGTGGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGAGAGAGAGAGCAGAAGTCCAAAGGTCAGGAGAATGAATGGAACAATGCAGCCAAGAGAAGGGTGTaGACAAGGGCATTGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGEREQKSKGQENEWNNAAKRRV*TRALAE Trigger: CTCTGCCAATGCCCTTGTGCACACCCTTCTCTTGGC...TGCATTGTTCCATTCATTCTCCTGACCTTTGGACTTCTGCTCTCTCTCTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| CDS-3UTR CCA 90 bp | CTTCGGTATGGCCCCCATAAACTCATATGTTTGAACAAGTCTATCTGGGCTAGACAGGCCTTGATCCTCTaGCTGAATGGGGAGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRYGPHKLICLNKSIWARQALIL*LNGEPQ Trigger: CTGGGGCTCCCCATTCAGCCAGAGGATCAAGGCCTG...TCTAGCCCAGATAGACTTGTTCAAACATATGAGTTTATGGGGGCCATACCGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 72 bp | CAGCCTACTTCCTTGTGTGAGCCCAGTGACAAGGGTTaGCAAAATTTCCAGAAGCAGCCCAAAAAGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPTSLCEPSDKG*QNFQKQPKKLS Trigger: GGAAAGCTTTTTGGGCTGCTTCTGGAAATTTTGCAAACCCTTGTCACTGGGCTCACACAAGGAAGTAGGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCACTGGTAGGAGGTGGGGGAACCTCTAGAAAGTCCCAGATACCTGGGATGGAGGATATTTCTCAATaGTCCTTTTATATCCCGATT | + |
|
Preference number: 4 (lower is better) Translates to: LPLVGGGGTSRKSQIPGMEDISQ*SFYIPI Trigger: AATCGGGATATAAAAGGAGCATTGAGAAATATCCTC...CATCCCAGGTATCTGGGACTTTCTAGAGGTTCCCCCACCTCCTACCAGTGGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| CDS-3UTR TCA 90 bp | AGGGGAGAGAGAGAGCAGAAGTCCAAAGGTCAGGAGAATGAATGGAACAATGCAGATTCACCATGGGTGTaGCCAGACTATATATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RGEREQKSKGQENEWNNADSPWV*PDYISQ Trigger: CTGTGATATATAGTCTGGTCACACCCATGGTGAATC...TGCATTGTTCCATTCATTCTCCTGACCTTTGGACTTCTGCTCTCTCTCTCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 72 bp | TGGAGTATATATGGCCTTTTTGGAGGAACTGTGTCATaGTGGGTACTGTCTTACGAGCCCACAACCTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: WSIYGLFGGTVS*WVLSYEPTTYL Trigger: GAGGTAGGTTGTGGGCTCGTAAGACAGTACCCACAATGACACAGTTCCTCCAAAAAGGCCATATATACTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGGACCTTTATGTGCCCCAGAGAGCTTATCCTTGTTTTTATCTTGTACAGGAACACAACCAGCATATaGGATGGACTGACTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRTFMCPRELILVFILYRNTTSI*DGLTVC Trigger: ACACACAGTCAGTCCATCTCATATGCTGGTTGTGTT...CCTGTACAAGATAAAAACAAGGATAAGCTCTCTGGGGCACATAAAGGTCCTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| CDS-3UTR CCA 90 bp | GACCACTTCAACATCAGACACAGAAATGAAGAGTTTGGAGTTTGTGCAGTTGGTTGTGCACAAGGGCATTaGCAGAGGATAAAACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DHFNIRHRNEEFGVCAVGCAQGH*QRIKPR Trigger: CCTGGGTTTTATCCTCTGCCAATGCCCTTGTGCACA...ACCAACTGCACAAACTCCAAACTCTTCATTTCTGTGTCTGATGTTGAAGTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 72 bp | AGGAAGTGTAGCCTTCTTGGAGTATATATGGCCTTTTaGGAGGAACTGTGTCATTGTGGGTACTGTCTTACG | + |
|
Preference number: 4 (lower is better) Translates to: RKCSLLGVYMAF*EELCHCGYCLT Trigger: CGTAAGACAGTACCCACAATGACACAGTTCCTCCAAAAAGGCCATATATACTCCAAGAAGGCTACACTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 72 bp | CTGGGTTCTGATGTTGCCAAGTGGCATTGTTTTCTGTaGTTTATGTTCTTGTGGTTGCCTCTTGCCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGSDVAKWHCFL*FMFLWLPLAIC Trigger: ACAGATGGCAAGAGGCAACCACAAGAACATAAACAACAGAAAACAATGCCACTTGGCAACATCAGAACCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGGGTTTGCAAAATTTCCAGAAGCAGCCCAAAAAGCTTTCCATATCCTGTTGCATCTTTGGAGCTGTaGCTGATGAGAAAGAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: TRVCKISRSSPKSFPYPVASLEL*LMRKRR Trigger: ACGTCTCTTTCTCATCAGTCACAGCTCCAAAGATGC...AACAGGATATGGAAAGCTTTTTGGGCTGCTTCTGGAAATTTTGCAAACCCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGGGTTTGCAAAATTTCCAGAAGCAGCCCAAAAAGCTTTCCATATCCTGTTAGAGGTTCTGACTCATaGTGGTGGTATAGTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TRVCKISRSSPKSFPYPVRGSDS*WWYSAE Trigger: CTCTGCACTATACCACCATCATGAGTCAGAACCTCT...AACAGGATATGGAAAGCTTTTTGGGCTGCTTCTGGAAATTTTGCAAACCCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 72 bp | GACCAGAAAGTGACACAATTAGGAAGTGTAGCCTTCTaGGAGTATATATGGCCTTTTTGGAGGAACTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DQKVTQLGSVAF*EYIWPFWRNCV Trigger: GACACAGTTCCTCCAAAAAGGCCATATATACTCCAAGAAGGCTACACTTCCTAATTGTGTCACTTTCTGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 72 bp | AAGACCACTTCAACATCAGACACAGAAATGAAGAGTTaGGAGTTTGTGCAGTTGGTTTCCTGTCTGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KTTSTSDTEMKS*EFVQLVSCLAL Trigger: CAAAGCCAGACAGGAAACCAACTGCACAAACTCCAAACTCTTCATTTCTGTGTCTGATGTTGAAGTGGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 72 bp | TGGTTATGTCATGCTATCTACTCCTCTTGGGTGAGCTaGCCTCTTTTTGTTCTAGAGCCTTCAGGTATATTG | + |
|
Preference number: 4 (lower is better) Translates to: WLCHAIYSSWVS*PLFVLEPSGIL Trigger: CAATATACCTGAAGGCTCTAGAACAAAAAGAGGCAAGCTCACCCAAGAGGAGTAGATAGCATGACATAACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| CDS-3UTR TCA 90 bp | AGTTTGGAGTTTGTGCAGTTGGTTTCCTGTCTGGCTTTGGGGATTACAGTTAAGGTATTATTTCTAAAATaGGATAGGCGAGCCAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLEFVQLVSCLALGITVKVLFLK*DRRAKR Trigger: TCTCTTGGCTCGCCTATCTCATTTTAGAAATAATAC...CTTAACTGTAATCCCCAAAGCCAGACAGGAAACCAACTGCACAAACTCCAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| CDS-3UTR TCA 90 bp | ACTACAGTGCTCCATAGAGGCTTATGCCAAAGTCTTGTTTATAGTTGTGATATAGACACAGTCTCCTGTTaGGGATATTTCTCAATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TTVLHRGLCQSLVYSCDIDTVSC*GYFSML Trigger: GAGCATTGAGAAATATCCTCAACAGGAGACTGTGTC...TATATCACAACTATAAACAAGACTTTGGCATAAGCCTCTATGGAGCACTGTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 72 bp | CTTATATTCCTGTTATCCTTATGTTTGGTCTTTTCATaGTGTCCTGAGTTTCCTGGATATTTTGAGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LIFLLSLCLVFS*CPEFPGYFESG Trigger: TCCTGACTCAAAATATCCAGGAAACTCAGGACACAATGAAAAGACCAAACATAAGGATAACAGGAATATAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 72 bp | TCTCCTATGATTTTGTTGAAGATGTTTCCTGTCCCTTaGAATTGGGAATCTTCACTCTCTTATATTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPMILLKMFPVP*NWESSLSYIPV Trigger: AACAGGAATATAAGAGAGTGAAGATTCCCAATTCAAAGGGACAGGAAACATCTTCAACAAAATCATAGGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 72 bp | GTGTTCTGTAAAGTGCTGAAGTATATTATGTTGTGTTaGGATGAAATGTTCTGCAGATATCTGTTAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFCKVLKYIMLC*DEMFCRYLLDP Trigger: AGGATCTAACAGATATCTGCAGAACATTTCATCCAAACACAACATAATATACTTCAGCACTTTACAGAACAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 72 bp | TGGAGAGTGTTCTGTAAAGTGCTGAAGTATATTATGTaGTGTTTGGATGAAATGTTCTGCAGATATCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: WRVFCKVLKYIM*CLDEMFCRYLL Trigger: TAACAGATATCTGCAGAACATTTCATCCAAACACAACATAATATACTTCAGCACTTTACAGAACACTCTCCA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 72 bp | AGCTTGCCTCTTTTTGTTCTAGAGCCTTCAGGTATATaGTTAATTTCCTACTTGAAATATCTCCAGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLPLFVLEPSGI*LISYLKYLQFL Trigger: AAGAAACTGGAGATATTTCAAGTAGGAAATTAACAATATACCTGAAGGCTCTAGAACAAAAAGAGGCAAGCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 72 bp | TGGTCTTTTCATTGTGTCCTGAGTTTCCTGGATATTTaGAGTCAGGAGCTTCTTATACTTTGTATTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WSFHCVLSFLDI*SQELLILCIFF Trigger: AAAGAAAATACAAAGTATAAGAAGCTCCTGACTCAAAATATCCAGGAAACTCAGGACACAATGAAAAGACCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 72 bp | AATCTTCACTCTCTTATATTCCTGTTATCCTTATGTTaGGTCTTTTCATTGTGTCCTGAGTTTCCTGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: NLHSLIFLLSLC*VFSLCPEFPGY Trigger: ATATCCAGGAAACTCAGGACACAATGAAAAGACCAAACATAAGGATAACAGGAATATAAGAGAGTGAAGATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| 3UTR CAA 72 bp | TATGATTTTGTTGAAGATGTTTCCTGTCCCTTTGAATaGGGAATCTTCACTCTCTTATATTCCTGTTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: YDFVEDVSCPFE*GIFTLLYSCYP Trigger: AGGATAACAGGAATATAAGAGAGTGAAGATTCCCAATTCAAAGGGACAGGAAACATCTTCAACAAAATCATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| CDS-3UTR CAA 90 bp | TGGTTTCCTGTCTGGCTTTGGGGATTACAGTTAAGTGATTGGATGAACCTCAGACACGTGGACAAGGCTTaGCAGATTCCCTTGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: WFPVWLWGLQLSDWMNLRHVDKA*QIPLMD Trigger: GTCCATCAAGGGAATCTGCAAAGCCTTGTCCACGTG...TCTGAGGTTCATCCAATCACTTAACTGTAATCCCCAAAGCCAGACAGGAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| CDS-3UTR CAA 90 bp | GTGCTCCATAGAGGCTTATGCCAAAGTCTTGTTTATAGTTGTGATATACCCTCTGTGTGCACAAGGGCATaGGCAGAGGATAAAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLHRGLCQSLVYSCDIPSVCTRA*AEDKTQ Trigger: CTGGGTTTTATCCTCTGCCAATGCCCTTGTGCACAC...AGAGGGTATATCACAACTATAAACAAGACTTTGGCATAAGCCTCTATGGAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| CDS-3UTR CAA 90 bp | CTTCGGTATGGCCCCCATAAACTCATATGTTTGAACAAGTCTATCTGGGCTAGAGGACACAGTCTCCTGTaGAGGATATTTCTCAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRYGPHKLICLNKSIWARGHSLL*RIFLNA Trigger: AGCATTGAGAAATATCCTCAACAGGAGACTGTGTCC...TCTAGCCCAGATAGACTTGTTCAAACATATGAGTTTATGGGGGCCATACCGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213300.2 |
||
| CDS CAA 72 bp | CAGGTACATGGCCAGGAACAGAGCAGAATACAGGCCTaGATCCTCTGGCTGAATGGGGAGCCCCAGGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: QVHGQEQSRIQA*ILWLNGEPQED Trigger: ATCCTCCTGGGGCTCCCCATTCAGCCAGAGGATCAAGGCCTGTATTCTGCTCTGTTCCTGGCCATGTACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100154.2 ENSMUST00000213300.2 |
||
| CDS CAA 90 bp | GGCAGGGTAATGACTAGTGTACCTAAAGGAAGGATGACCATCTCATaGATGGTGGTGTCTGAGCTCGACAGGCTCAATAAGGCAGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GRVMTSVPKGRMTIS*MVVSELDRLNKAEG Trigger: ACCCTCTGCCTTATTGAGCCTGTCGAGCTCAGACACCACCATCAATGAGATGGTCATCCTTCCTTTAGGTACACTAGTCATTACCCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100154.2 ENSMUST00000213300.2 |
||