Pregenerated sensors for OLFR338 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068950Ensembl transcript IDs: ENSMUST00000072114.4, ENSMUST00000091006.2, ENSMUST00000217511.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCAGAGAAATACAGAGGCTTGCAGCCAACCATTGGACTGAGCACTaGGTCCCTGATGGAGGAGTGGGAGAAGGGACTGAAGGAGCTGAG | + |
|
Preference number: 1 (lower is better) Translates to: AREIQRLAANHWTEH*VPDGGVGEGTEGAE Trigger: CTCAGCTCCTTCAGTCCCTTCTCCCACTCCTCCATCAGGGACCCAGTGCTCAGTCCAATGGTTGGCTGCAAGCCTCTGTATTTCTCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR TCA 90 bp | CTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTaGTGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTC | + |
|
Preference number: 1 (lower is better) Translates to: LGHIKFASPMGLSFQ*WPTRPSFDTYAARV Trigger: GACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CCA 90 bp | TCTGTGTTTGCTAGGCCCCAGCATTGTCTCACAAGAGACAGCTCCTaGGCATATATCCAGAAGATGTTCCAACCAGTAAGAAGGACACAT | + |
|
Preference number: 1 (lower is better) Translates to: SVFARPQHCLTRDSS*AYIQKMFQPVRRTH Trigger: ATGTGTCCTTCTTACTGGTTGGAACATCTTCTGGATATATGCCCAGGAGCTGTCTCTTGTGAGACAATGCTGGGGCCTAGCAAACACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR GCA 90 bp | AGTGTTGACTTCACAGGAGAGGGACAAGGGGTGATGATGATGGAGTaGAATATACAAGTAGTACGGGAATGGACTCTGAGTGCTTATACC | + |
|
Preference number: 1 (lower is better) Translates to: SVDFTGEGQGVMMME*NIQVVREWTLSAYT Trigger: GGTATAAGCACTCAGAGTCCATTCCCGTACTACTTGTATATTGCACTCCATCATCATCACCCCTTGTCCCTCTCCTGTGAAGTCAACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CCA 90 bp | CCTCAGACCCTATTTGACTGTCCCGCTGGTAGGGACAATAGGAAATaGGTTGAATTGGTGATTATTGTGTTAGATGGCCCAGACTTCCAA | + |
|
Preference number: 1 (lower is better) Translates to: PQTLFDCPAGRDNRK*VELVIIVLDGPDFQ Trigger: TTGGAAGTCTGGGCCATCTAACACAATAATCACCAATTCAACCCATTTCCTATTGTCCCTACCAGCGGGACAGTCAAATAGGGTCTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CCA 90 bp | CATGATCCACAGGTTCTCTATGAAATAGATTCAGCCTATTCTCAGTaGCTATGGTGTTCATGGATTTCCACACCTGTGTCCAAGGCCACT | + |
|
Preference number: 1 (lower is better) Translates to: HDPQVLYEIDSAYSQ*LWCSWISTPVSKAT Trigger: AGTGGCCTTGGACACAGGTGTGGAAATCCATGAACACCATAGCCACTGAGAATAGGCTGAATCTATTTCATAGAGAACCTGTGGATCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CCA 90 bp | TGCTCCACTATGTTCCTAGCAGCCTTATTTATAATAGCCAGAAGCTaGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAA | + |
|
Preference number: 1 (lower is better) Translates to: CSTMFLAALFIIARS*KEPRCPSTEEWIQK Trigger: TTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTAGGAACATAGTGGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR TCA 90 bp | AGGCTGAAAAATTCCATGCATGGCTGGAATGAGGTCTCAGAATGGTaGCTGCAATCTGTACATAAGAAGCCAAAAGACATCAATGTGAGG | + |
|
Preference number: 1 (lower is better) Translates to: RLKNSMHGWNEVSEW*LQSVHKKPKDINVR Trigger: CCTCACATTGATGTCTTTTGGCTTCTTATGTACAGATTGCAGTCACCATTCTGAGACCTCATTCCAGCCATGCATGGAATTTTTCAGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR TCA 90 bp | CAAACTATGTGGAAAGAAGGAAAAACTGGTAGTGTACCTGAAACTTaGCCTAAGGAGAGAACTATAGTGTTGACTTCACAGGAGAGGGAC | + |
|
Preference number: 1 (lower is better) Translates to: QTMWKEGKTGSVPET*PKERTIVLTSQERD Trigger: GTCCCTCTCCTGTGAAGTCAACACTATAGTTCTCTCCTTAGGTCAAGTTTCAGGTACACTACCAGTTTTTCCTTCTTTCCACATAGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR GCA 90 bp | CTAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATaGCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTAC | + |
|
Preference number: 1 (lower is better) Translates to: LAALFIIARSWKEPR*PSTEEWIQKMWYIY Trigger: GTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR GCA 90 bp | AACCATTGGACTGAGCACTGGGTCCCTGATGGAGGAGTGGGAGAAGGGACTGAACCCAGTGTAGGGGAATaGCAAGGCAGGAAGAAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: NHWTEHWVPDGGVGEGTEPSVGE*QGRKKG Trigger: GCCCTTCTTCCTGCCTTGGCATTCCCCTACACTGGG...TTCAGTCCCTTCTCCCACTCCTCCATCAGGGACCCAGTGCTCAGTCCAATGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CCA 90 bp | AACCATTGGACTGAGCACTGGGTCCCTGATGGAGGAGTGGGAGAAGGGACTGAAGTCCTAGGCAACAAATaGGAAGCAGAAGATGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: NHWTEHWVPDGGVGEGTEVLGNK*EAEDAS Trigger: TGATGCATCTTCTGCTTCCCATTTGTTGCCTAGGAC...TTCAGTCCCTTCTCCCACTCCTCCATCAGGGACCCAGTGCTCAGTCCAATGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CCA 90 bp | AACCATTGGACTGAGCACTGGGTCCCTGATGGAGGAGTGGGAGAAGGGACTGAAAGTTTGCAAGTCCAATaGGCCTCTCTTTCCAGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: NHWTEHWVPDGGVGEGTESLQVQ*ASLSSD Trigger: ATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACT...TTCAGTCCCTTCTCCCACTCCTCCATCAGGGACCCAGTGCTCAGTCCAATGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR TCA 90 bp | AACCATTGGACTGAGCACTGGGTCCCTGATGGAGGAGTGGGAGAAGGGACTGAATTACAAACAAGAGGCTaGAAAATTCCATGCATGGCT | + |
|
Preference number: 2 (lower is better) Translates to: NHWTEHWVPDGGVGEGTELQTRG*KIPCMA Trigger: AGCCATGCATGGAATTTTTCAGCCTCTTGTTTGTAA...TTCAGTCCCTTCTCCCACTCCTCCATCAGGGACCCAGTGCTCAGTCCAATGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTTGGAAAGAACCCAGATaGCCCTCAACAGAGGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: VPPIGLQIPLAPWVLSLAWKEPR*PSTEEW Trigger: CCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCA...AGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR TCA 90 bp | AACCATTGGACTGAGCACTGGGTCCCTGATGGAGGAGTGGGAGAAGGGACTGAATGGAGACCTGTTTCCTaGAATTATCAAGATCAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: NHWTEHWVPDGGVGEGTEWRPVS*NYQDQE Trigger: TTCTTGATCTTGATAATTTCAGGAAACAGGTCTCCA...TTCAGTCCCTTCTCCCACTCCTCCATCAGGGACCCAGTGCTCAGTCCAATGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR GCA 90 bp | AACCATTGGACTGAGCACTGGGTCCCTGATGGAGGAGTGGGAGAAGGGACTGAAGGAATGGACTCTGAGTaGTTATACCACAAAATATGT | + |
|
Preference number: 2 (lower is better) Translates to: NHWTEHWVPDGGVGEGTEGMDSE*LYHKIC Trigger: ACATATTTTGTGGTATAAGCACTCAGAGTCCATTCC...TTCAGTCCCTTCTCCCACTCCTCCATCAGGGACCCAGTGCTCAGTCCAATGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR GCA 90 bp | GCACTCAGGAGACAGAGGCAAGCAGATCTCGATGAACTAAAAACTAGTCTGGTCGGGGCATATAAAGTTTaGAAGTCCAATGGGCCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: ALRRQRQADLDELKTSLVGAYKV*KSNGPL Trigger: GAGAGGCCCATTGGACTTGCAAACTTTATATGCCCC...GACCAGACTAGTTTTTAGTTCATCGAGATCTGCTTGCCTCTGTCTCCTGAGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCAGTGGCTATGGTGTTCATGGATTTCCACACCTGTGTCCAAGGCCACTTGAGTTTGCAAGTCCAATaGGCCTCTCTTTCCAGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: FSVAMVFMDFHTCVQGHLSLQVQ*ASLSSD Trigger: ATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACT...CAAGTGGCCTTGGACACAGGTGTGGAAATCCATGAACACCATAGCCACTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTGCTGAACTTTCTACCTAGCCAATATCCTGCTTTTGGGAGCAGGTGGTTTGAGCATCATCCTGAGTaGGGTAACACAATCACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LLLNFLPSQYPAFGSRWFEHHPE*GNTITK Trigger: CTTTGTGATTGTGTTACCTCACTCAGGATGATGCTC...AAACCACCTGCTCCCAAAAGCAGGATATTGGCTAGGTAGAAAGTTCAGCAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CCA 90 bp | GCACTCAGGAGACAGAGGCAAGCAGATCTCGATGAACTAAAAACTAGTCTGGTCGTCCTAGGCAACAAATaGGAAGCAGAAGATGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: ALRRQRQADLDELKTSLVVLGNK*EAEDAS Trigger: TGATGCATCTTCTGCTTCCCATTTGTTGCCTAGGAC...GACCAGACTAGTTTTTAGTTCATCGAGATCTGCTTGCCTCTGTCTCCTGAGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CCA 90 bp | GCACTCAGGAGACAGAGGCAAGCAGATCTCGATGAACTAAAAACTAGTCTGGTCACAAGAGACAGCTCCTaGGCATATATCCAGAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: ALRRQRQADLDELKTSLVTRDSS*AYIQKM Trigger: CATCTTCTGGATATATGCCCAGGAGCTGTCTCTTGT...GACCAGACTAGTTTTTAGTTCATCGAGATCTGCTTGCCTCTGTCTCCTGAGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTGCTGAACTTTCTACCTAGCCAATATCCTGCTTTTGGGAGCAGGTGGTTTTTACAAACAAGAGGCTaGAAAATTCCATGCATGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LLLNFLPSQYPAFGSRWFLQTRG*KIPCMA Trigger: AGCCATGCATGGAATTTTTCAGCCTCTTGTTTGTAA...AAACCACCTGCTCCCAAAAGCAGGATATTGGCTAGGTAGAAAGTTCAGCAGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR TCA 90 bp | GCACTCAGGAGACAGAGGCAAGCAGATCTCGATGAACTAAAAACTAGTCTGGTCCTAGCAAGATTTTGCTaGAAGGACCCAGATAAACTA | + |
|
Preference number: 2 (lower is better) Translates to: ALRRQRQADLDELKTSLVLARFC*KDPDKL Trigger: TAGTTTATCTGGGTCCTTTCAGCAAAATCTTGCTAG...GACCAGACTAGTTTTTAGTTCATCGAGATCTGCTTGCCTCTGTCTCCTGAGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR GCA 90 bp | GCACTCAGGAGACAGAGGCAAGCAGATCTCGATGAACTAAAAACTAGTCTGGTCGTGATGATGATGGAGTaGAATATACAAGTAGTACGG | + |
|
Preference number: 2 (lower is better) Translates to: ALRRQRQADLDELKTSLVVMMME*NIQVVR Trigger: CCGTACTACTTGTATATTGCACTCCATCATCATCAC...GACCAGACTAGTTTTTAGTTCATCGAGATCTGCTTGCCTCTGTCTCCTGAGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTGTGATGATGATGGAGTaGAATATACAAGTAGTACGG | + |
|
Preference number: 2 (lower is better) Translates to: VPPIGLQIPLAPWVLSLAVMMME*NIQVVR Trigger: CCGTACTACTTGTATATTGCACTCCATCATCATCAC...AGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCAGTGGCTATGGTGTTCATGGATTTCCACACCTGTGTCCAAGGCCACTTGGATGAGCAAACTATGTaGAAAGAAGGAAAAACTGGT | + |
|
Preference number: 2 (lower is better) Translates to: FSVAMVFMDFHTCVQGHLDEQTM*KEGKTG Trigger: ACCAGTTTTTCCTTCTTTCCACATAGTTTGCTCATC...CAAGTGGCCTTGGACACAGGTGTGGAAATCCATGAACACCATAGCCACTGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGAAGACCAAAGTGTaGACACTGTGCCCCTTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: PRCPSTEEWIQKMWYIYTMKTKV*TLCPFL Trigger: TAAGAAGGGGCACAGTGTCCACACTTTGGTCTTCAT...TGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTTGGAGACCTGTTTCCTaGAATTATCAAGATCAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: VPPIGLQIPLAPWVLSLAWRPVS*NYQDQE Trigger: TTCTTGATCTTGATAATTTCAGGAAACAGGTCTCCA...AGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCACACCTGTGTCCAAGGCCACTTGGTAAAACCCTGACTCAAAAACAAATAGAGCATCATCCTGAGTaGGGTAACACAATCACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: FPHLCPRPLGKTLTQKQIEHHPE*GNTITK Trigger: CTTTGTGATTGTGTTACCTCACTCAGGATGATGCTC...TATTTGTTTTTGAGTCAGGGTTTTACCAAGTGGCCTTGGACACAGGTGTGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTGAAGATATTTATATGTaGCAGTCAAGGAAGAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: VPPIGLQIPLAPWVLSLAEDIYM*QSRKSP Trigger: AGGACTCTTCCTTGACTGGCACATATAAATATCTTC...AGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCAGTAAGAAGGACACATGCTCCACTATGTTCCTAGCAGCCTTATTTATAATATGGAAAGAACCCAGATaGCCCTCAACAGAGGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: TSKKDTCSTMFLAALFIIWKEPR*PSTEEW Trigger: CCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCA...TATTATAAATAAGGCTGCTAGGAACATAGTGGAGCATGTGTCCTTCTTACTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTCTACATGAACTACATGATCCACAGGTTCTCTATGAAATAGATTCAGCCTATGGGGCATATAAAGTTTaGAAGTCCAATGGGCCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GLHELHDPQVLYEIDSAYGAYKV*KSNGPL Trigger: GAGAGGCCCATTGGACTTGCAAACTTTATATGCCCC...ATAGGCTGAATCTATTTCATAGAGAACCTGTGGATCATGTAGTTCATGTAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCACACCTGTGTCCAAGGCCACTTGGTAAAACCCTGACTCAAAAACAAATAGCCCCTTCTTATAATTaGGAACAAAACACCCATGGA | + |
|
Preference number: 2 (lower is better) Translates to: FPHLCPRPLGKTLTQKQIAPSYN*EQNTHG Trigger: TCCATGGGTGTTTTGTTCCCAATTATAAGAAGGGGC...TATTTGTTTTTGAGTCAGGGTTTTACCAAGTGGCCTTGGACACAGGTGTGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTGCTGAACTTTCTACCTAGCCAATATCCTGCTTTTGGGAGCAGGTGGTTTGAACTCACTGATAAGTaGATATTAGCCCAAAAACTT | + |
|
Preference number: 2 (lower is better) Translates to: LLLNFLPSQYPAFGSRWFELTDK*ILAQKL Trigger: AAGTTTTTGGGCTAATATCCACTTATCAGTGAGTTC...AAACCACCTGCTCCCAAAAGCAGGATATTGGCTAGGTAGAAAGTTCAGCAGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CAA 90 bp | TGTGAGGTTAATGAACCCCACCCTGCAGTAACCATAACCAGTTCATaGGTGGTGTGTCTGAGATACAGTATCTATTTAAGCTTACTATCA | + |
|
Preference number: 2 (lower is better) Translates to: CEVNEPHPAVTITSS*VVCLRYSIYLSLLS Trigger: TGATAGTAAGCTTAAATAGATACTGTATCTCAGACACACCACCAATGAACTGGTTATGGTTACTGCAGGGTGGGGTTCATTAACCTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CAA 90 bp | ATAGCTATAGATCTTATGAACAGGTACCTAGCAACCCACACTGTTTaGTTCCTCCTGCTGAACTTTCTACCTAGCCAATATCCTGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: IAIDLMNRYLATHTV*FLLLNFLPSQYPAF Trigger: AAAAGCAGGATATTGGCTAGGTAGAAAGTTCAGCAGGAGGAACAAAACAGTGTGGGTTGCTAGGTACCTGTTCATAAGATCTATAGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCACACCTGTGTCCAAGGCCACTTGGTAAAACCCTGACTCAAAAACAAATATCTCAGAATGGTGACTaGAATCTGTACATAAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: FPHLCPRPLGKTLTQKQISQNGD*NLYIRS Trigger: GCTTCTTATGTACAGATTGCAGTCACCATTCTGAGA...TATTTGTTTTTGAGTCAGGGTTTTACCAAGTGGCCTTGGACACAGGTGTGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCACACCTGTGTCCAAGGCCACTTGGTAAAACCCTGACTCAAAAACAAATAGATGAGCAAACTATGTaGAAAGAAGGAAAAACTGGT | + |
|
Preference number: 2 (lower is better) Translates to: FPHLCPRPLGKTLTQKQIDEQTM*KEGKTG Trigger: ACCAGTTTTTCCTTCTTTCCACATAGTTTGCTCATC...TATTTGTTTTTGAGTCAGGGTTTTACCAAGTGGCCTTGGACACAGGTGTGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACATACAGAGATAAAATTTaGAGCTGTGAAGAAAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: PRCPSTEEWIQKMWYIYTYRDKI*SCEERM Trigger: CATCCTTTCTTCACAGCTCCAAATTTTATCTCTGTA...TGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTCTACATGAACTACATGATCCACAGGTTCTCTATGAAATAGATTCAGCCTATAGTGTACCTGAAACTTaGCCTAAGGAGAGAACTATA | + |
|
Preference number: 2 (lower is better) Translates to: GLHELHDPQVLYEIDSAYSVPET*PKERTI Trigger: TATAGTTCTCTCCTTAGGTCAAGTTTCAGGTACACT...ATAGGCTGAATCTATTTCATAGAGAACCTGTGGATCATGTAGTTCATGTAGACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCACACCTGTGTCCAAGGCCACTTGGTAAAACCCTGACTCAAAAACAAATACATTTACATTTCCAATaGTATCCAAAAAGTCCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: FPHLCPRPLGKTLTQKQIHLHFQ*YPKSPQ Trigger: TTGGGGACTTTTTGGATAGCATTGGAAATGTAAATG...TATTTGTTTTTGAGTCAGGGTTTTACCAAGTGGCCTTGGACACAGGTGTGGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR GCA 90 bp | TACAAAATGATGAGCAAACTATGTGGAAAGAAGGAAAAACTGGTAGTGTACCTGTCTCAGAATGGTGACTaGAATCTGTACATAAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: YKMMSKLCGKKEKLVVYLSQNGD*NLYIRS Trigger: GCTTCTTATGTACAGATTGCAGTCACCATTCTGAGA...CAGGTACACTACCAGTTTTTCCTTCTTTCCACATAGTTTGCTCATCATTTTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGGAACAAAACACCCATGGAAAGAGTTACAGAGATAAAATTTGGAGCTGTGAAGGAATGGACTCTGAGTaGTTATACCACAAAATATGT | + |
|
Preference number: 2 (lower is better) Translates to: WEQNTHGKSYRDKIWSCEGMDSE*LYHKIC Trigger: ACATATTTTGTGGTATAAGCACTCAGAGTCCATTCC...TTCACAGCTCCAAATTTTATCTCTGTAACTCTTTCCATGGGTGTTTTGTTCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CAA 90 bp | CACTTTTATACTTTACATAAACTTGATCTCCTTAAACAAAGAAGTTaGCACAGCCCTTTTCACCACCTAGAACCTGTACCCATATTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: HFYTLHKLDLLKQRS*HSPFHHLEPVPILS Trigger: AGACAATATGGGTACAGGTTCTAGGTGGTGAAAAGGGCTGTGCAAACTTCTTTGTTTAAGGAGATCAAGTTTATGTAAAGTATAAAAGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTCTACATGAACTACATGATCCACAGGTTCTCTATGAAATAGATTCAGCCTATCATTTACATTTCCAATaGTATCCAAAAAGTCCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: GLHELHDPQVLYEIDSAYHLHFQ*YPKSPQ Trigger: TTGGGGACTTTTTGGATAGCATTGGAAATGTAAATG...ATAGGCTGAATCTATTTCATAGAGAACCTGTGGATCATGTAGTTCATGTAGACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTCTACATGAACTACATGATCCACAGGTTCTCTATGAAATAGATTCAGCCTATGAACTCACTGATAAGTaGATATTAGCCCAAAAACTT | + |
|
Preference number: 2 (lower is better) Translates to: GLHELHDPQVLYEIDSAYELTDK*ILAQKL Trigger: AAGTTTTTGGGCTAATATCCACTTATCAGTGAGTTC...ATAGGCTGAATCTATTTCATAGAGAACCTGTGGATCATGTAGTTCATGTAGACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CCA 72 bp | CCACATATGTGGCAGAGGGTGGCCTTGTTCTATCAGTaGGAGGAGAGGTCCTTGGGCCTGAGGGTGTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: PHMWQRVALFYQ*EERSLGLRVFD Trigger: ATCAAACACCCTCAGGCCCAAGGACCTCTCCTCCCACTGATAGAACAAGGCCACCCTCTGCCACATATGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CCA 72 bp | TACACATGGAGAGACCCATGGCTCCAGCCACATATGTaGCAGAGGGTGGCCTTGTTCTATCAGTGGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: YTWRDPWLQPHM*QRVALFYQWEE Trigger: CTCCTCCCACTGATAGAACAAGGCCACCCTCTGCCACATATGTGGCTGGAGCCATGGGTCTCTCCATGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CCA 72 bp | TCTGCCAGAGAAATACAGAGGCTTGCAGCCAACCATTaGACTGAGCACTGGGTCCCTGATGGAGGAGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SAREIQRLAANH*TEHWVPDGGVG Trigger: TCCCACTCCTCCATCAGGGACCCAGTGCTCAGTCCAATGGTTGGCTGCAAGCCTCTGTATTTCTCTGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCAGTGGCTATGGTGTTCATGGATTTCCACACCTGTGTCCAAGGCCACTTGTCCCACTCCCACTTTTaGGCCCTGGCGTTCCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FSVAMVFMDFHTCVQGHLSHSHF*ALAFPC Trigger: ACAGGGGAACGCCAGGGCCAAAAAGTGGGAGTGGGA...CAAGTGGCCTTGGACACAGGTGTGGAAATCCATGAACACCATAGCCACTGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CCA 72 bp | GTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTaGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VPPIGLQIPLAP*VLSLAPPLGAL Trigger: CAGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CCA 72 bp | GGAATACCAACCAAAGAATACACATGGAGAGACCCATaGCTCCAGCCACATATGTGGCAGAGGGTGGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GIPTKEYTWRDP*LQPHMWQRVAL Trigger: CAAGGCCACCCTCTGCCACATATGTGGCTGGAGCCATGGGTCTCTCCATGTGTATTCTTTGGTTGGTATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCCATCCACTTCTGTGTTaGCTAGGCCCCAGCATTGTC | + |
|
Preference number: 3 (lower is better) Translates to: CSTYRVADPFSSLGTFSSHPLLC*LGPSIV Trigger: GACAATGCTGGGGCCTAGCAAACACAGAAGTGGATG...GCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCATTGGACTGAGCACTGGGTCCCTGATGGAGGAGTGGGAGAAGGGACTGAACTTGATAAATCAGACTaGCTACCCATTCTTTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: NHWTEHWVPDGGVGEGTELDKSD*LPILCV Trigger: AACACAAAGAATGGGTAGCAAGTCTGATTTATCAAG...TTCAGTCCCTTCTCCCACTCCTCCATCAGGGACCCAGTGCTCAGTCCAATGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR TCA 72 bp | GCCAATATTCTCAGCACTCAGGAGGCAGAGGTAGGCTaGTCTCAACTGGATCAAGGCAAAACTGGTCTATAT | + |
|
Preference number: 3 (lower is better) Translates to: ANILSTQEAEVG*SQLDQGKTGLY Trigger: ATATAGACCAGTTTTGCCTTGATCCAGTTGAGATCAGCCTACCTCTGCCTCCTGAGTGCTGAGAATATTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR GCA 72 bp | TTCACAGGAGAGGGACAAGGGGTGATGATGATGGAGTaGAATATACAAGTAGTACGGGAATGGACTCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: FTGEGQGVMMME*NIQVVREWTLS Trigger: ACTCAGAGTCCATTCCCGTACTACTTGTATATTGCACTCCATCATCATCACCCCTTGTCCCTCTCCTGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CCA 72 bp | ATGTTCCTAGCAGCCTTATTTATAATAGCCAGAAGCTaGAAAGAACCCAGATGCCCCTCAACAGAGGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: MFLAALFIIARS*KEPRCPSTEEW Trigger: CCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTAGGAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CCA 72 bp | CTCTATGAAATAGATTCAGCCTATTCTCAGTGGCTATaGTGTTCATGGATTTCCACACCTGTGTCCAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LYEIDSAYSQWL*CSWISTPVSKA Trigger: GGCCTTGGACACAGGTGTGGAAATCCATGAACACCATAGCCACTGAGAATAGGCTGAATCTATTTCATAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAACCATAACCAGTTCATaGGTGGTGTGTCTGAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: PRCPSTEEWIQKMWYIYTTITSS*VVCLRY Trigger: GTATCTCAGACACACCACCAATGAACTGGTTATGGT...TGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CAA 90 bp | GCACTCAGGAGACAGAGGCAAGCAGATCTCGATGAACTAAAAACTAGTCTGGTCGAACCTGTACCCATATaGTCTACCTTATATCAATGG | + |
|
Preference number: 3 (lower is better) Translates to: ALRRQRQADLDELKTSLVEPVPI*STLYQW Trigger: CCATTGATATAAGGTAGACAATATGGGTACAGGTTC...GACCAGACTAGTTTTTAGTTCATCGAGATCTGCTTGCCTCTGTCTCCTGAGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR TCA 72 bp | CGGCAAATGGATGGACCTGGAGAGCATCATCCTGAGTaGGGTAACACAATCACAAAGGAATTCACACAATAT | + |
|
Preference number: 3 (lower is better) Translates to: RQMDGPGEHHPE*GNTITKEFTQY Trigger: ATATTGTGTGAATTCCTTTGTGATTGTGTTACCTCACTCAGGATGATGCTCTCCAGGTCCATCCATTTGCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR TCA 72 bp | ATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTaGTGGCCGACTAGGCCATCTTTTGATACATATGCA | + |
|
Preference number: 3 (lower is better) Translates to: IKFASPMGLSFQ*WPTRPSFDTYA Trigger: TGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CCA 72 bp | CAGGTTCTCTATGAAATAGATTCAGCCTATTCTCAGTaGCTATGGTGTTCATGGATTTCCACACCTGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QVLYEIDSAYSQ*LWCSWISTPVS Trigger: GGACACAGGTGTGGAAATCCATGAACACCATAGCCACTGAGAATAGGCTGAATCTATTTCATAGAGAACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CCA 72 bp | CTATTTGACTGTCCCGCTGGTAGGGACAATAGGAAATaGGTTGAATTGGTGATTATTGTGTTAGATGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LFDCPAGRDNRK*VELVIIVLDGP Trigger: TGGGCCATCTAACACAATAATCACCAATTCAACCCATTTCCTATTGTCCCTACCAGCGGGACAGTCAAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCAAATGATGACTCCATaGCATACACTAGCAAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: VPPIGLQIPLAPWVLSLAQMMTP*HTLARF Trigger: AAATCTTGCTAGTGTATGCAATGGAGTCATCATTTG...AGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CCA 72 bp | AGACCAAAGTGTGGACACTGTGCCCCTTCTTATAATTaGGAACAAAACACCCATGGAAAGAGTTACAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: RPKCGHCAPSYN*EQNTHGKSYRD Trigger: ATCTCTGTAACTCTTTCCATGGGTGTTTTGTTCCCAATTATAAGAAGGGGCACAGTGTCCACACTTTGGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCACACCTGTGTCCAAGGCCACTTGGTAAAACCCTGACTCAAAAACAAATAGAACCTGTACCCATATaGTCTACCTTATATCAATGG | + |
|
Preference number: 3 (lower is better) Translates to: FPHLCPRPLGKTLTQKQIEPVPI*STLYQW Trigger: CCATTGATATAAGGTAGACAATATGGGTACAGGTTC...TATTTGTTTTTGAGTCAGGGTTTTACCAAGTGGCCTTGGACACAGGTGTGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR TCA 72 bp | TGGAAAGAAGGAAAAACTGGTAGTGTACCTGAAACTTaGCCTAAGGAGAGAACTATAGTGTTGACTTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: WKEGKTGSVPET*PKERTIVLTSQ Trigger: CTGTGAAGTCAACACTATAGTTCTCTCCTTAGGTCAAGTTTCAGGTACACTACCAGTTTTTCCTTCTTTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CCA 72 bp | ATTAAAAGGAATGAATTTATGAAATTCCTCGGCAAATaGATGGACCTGGAGAGCATCATCCTGAGTGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: IKRNEFMKFLGK*MDLESIILSEV Trigger: TACCTCACTCAGGATGATGCTCTCCAGGTCCATCCATTTGCCGAGGAATTTCATAAATTCATTCCTTTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR GCA 72 bp | TATCCAGAAGATGTTCCAACCAGTAAGAAGGACACATaGTCCACTATGTTCCTAGCAGCCTTATTTATAATA | + |
|
Preference number: 3 (lower is better) Translates to: YPEDVPTSKKDT*STMFLAALFII Trigger: TATTATAAATAAGGCTGCTAGGAACATAGTGGAGCATGTGTCCTTCTTACTGGTTGGAACATCTTCTGGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAACAAAACACCCATGGAAAGAGTTACAGAGATAAAATTTGGAGCTGTGAACAAATGATGACTCCATaGCATACACTAGCAAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: WEQNTHGKSYRDKIWSCEQMMTP*HTLARF Trigger: AAATCTTGCTAGTGTATGCAATGGAGTCATCATTTG...TTCACAGCTCCAAATTTTATCTCTGTAACTCTTTCCATGGGTGTTTTGTTCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR GCA 72 bp | GTGCAATATACAAGTAGTACGGGAATGGACTCTGAGTaGTTATACCACAAAATATGTCAAACATTTAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VQYTSSTGMDSE*LYHKICQTFRR Trigger: TCTCCTAAATGTTTGACATATTTTGTGGTATAAGCACTCAGAGTCCATTCCCGTACTACTTGTATATTGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CCA 72 bp | ATGATGATGGAGTGCAATATACAAGTAGTACGGGAATaGACTCTGAGTGCTTATACCACAAAATATGTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: MMMECNIQVVRE*TLSAYTTKYVK Trigger: TTTGACATATTTTGTGGTATAAGCACTCAGAGTCCATTCCCGTACTACTTGTATATTGCACTCCATCATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR TCA 72 bp | TGTACCCATATTGTCTACCTTATATCAATGGACCACTaGGTTTGGAAGAAAATAGAAAGTAACTGCATAGAT | + |
|
Preference number: 3 (lower is better) Translates to: CTHIVYLISMDH*VWKKIESNCID Trigger: ATCTATGCAGTTACTTTCTATTTTCTTCCAAACTCAGTGGTCCATTGATATAAGGTAGACAATATGGGTACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR TCA 72 bp | ATGATGACTCCATTGCATACACTAGCAAGATTTTGCTaGAAGGACCCAGATAAACTAGTGCTTTTTAAATTA | + |
|
Preference number: 3 (lower is better) Translates to: MMTPLHTLARFC*KDPDKLVLFKL Trigger: TAATTTAAAAAGCACTAGTTTATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGAGTCATCAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR TCA 72 bp | GATACCCAAGATATAAGATACAATTTGTTAAACGCATaGAACTCAAGAAGAATGAAGACCAAAGTGTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: DTQDIRYNLLNA*NSRRMKTKVWT Trigger: TGTCCACACTTTGGTCTTCATTCTTCTTGAGTTTCATGCGTTTAACAAATTGTATCTTATATCTTGGGTATC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CCA 72 bp | ACAAAGGAATTCACACAATATGAACTCACTGATAAGTaGATATTAGCCCAAAAACTTAGGATACCCAAGATA | + |
|
Preference number: 3 (lower is better) Translates to: TKEFTQYELTDK*ILAQKLRIPKI Trigger: TATCTTGGGTATCCTAAGTTTTTGGGCTAATATCCACTTATCAGTGAGTTCATATTGTGTGAATTCCTTTGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR TCA 90 bp | AACCATTGGACTGAGCACTGGGTCCCTGATGGAGGAGTGGGAGAAGGGACTGAAGGAGCCCCAGAAGGATaGACTCAGACACAGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NHWTEHWVPDGGVGEGTEGAPEG*TQTQCS Trigger: AGAGCACTGTGTCTGAGTTCATCCTTCTGGGGCTCC...TTCAGTCCCTTCTCCCACTCCTCCATCAGGGACCCAGTGCTCAGTCCAATGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CAA 72 bp | TGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTaGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSTYRVADPFSS*GTFSSSSIGGP Trigger: AGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CAA 72 bp | CAAACCCTGGACACGATTGTGGGTGCTAGGAAGTGCTaGCTGATGAGAGAGCCTGATATGAGAAGAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTLDTIVGARKC*LMREPDMRRVS Trigger: GGAGACTCTTCTCATATCAGGCTCTCTCATCAGCAAGCACTTCCTAGCACCCACAATCGTGTCCAGGGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CAA 72 bp | CATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTaGCTAGGCCCCAGCATTGTCTCACAAGAGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HPIADCEHPLLC*LGPSIVSQETA Trigger: AGCTGTCTCTTGTGAGACAATGCTGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTATTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCAGTGGCTATGGTGTTCATGGATTTCCACACCTGTGTCCAAGGCCACTTGGCCAAGAGAAGGGTGTaGACAAGGCAATTTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSVAMVFMDFHTCVQGHLAKRRV*TRQFAE Trigger: TTCTGCAAATTGCCTTGTGCACACCCTTCTCTTGGC...CAAGTGGCCTTGGACACAGGTGTGGAAATCCATGAACACCATAGCCACTGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCAGTGGCTATGGTGTTCATGGATTTCCACACCTGTGTCCAAGGCCACTTGAATACACCCAGCATATaGGATGGACTGACTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSVAMVFMDFHTCVQGHLNTPSI*DGLTVC Trigger: ACACACAGTCAGTCCATCTCATATGCTGGGTGTATT...CAAGTGGCCTTGGACACAGGTGTGGAAATCCATGAACACCATAGCCACTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTGCTGAACTTTCTACCTAGCCAATATCCTGCTTTTGGGAGCAGGTGGTTTGCATATGAGATGGACTaGCTGTGTGTCAGCATATTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLNFLPSQYPAFGSRWFAYEMD*LCVSIF Trigger: GAATATGCTGACACACAGTCAGTCCATCTCATATGC...AAACCACCTGCTCCCAAAAGCAGGATATTGGCTAGGTAGAAAGTTCAGCAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR TCA 90 bp | GCACTCAGGAGACAGAGGCAAGCAGATCTCGATGAACTAAAAACTAGTCTGGTCAATACACCCAGCATATaGGATGGACTGACTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALRRQRQADLDELKTSLVNTPSI*DGLTVC Trigger: ACACACAGTCAGTCCATCTCATATGCTGGGTGTATT...GACCAGACTAGTTTTTAGTTCATCGAGATCTGCTTGCCTCTGTCTCCTGAGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR TCA 90 bp | ACCAGTAAGAAGGACACATGCTCCACTATGTTCCTAGCAGCCTTATTTATAATAGGAGCCCCAGAAGGATaGACTCAGACACAGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSKKDTCSTMFLAALFIIGAPEG*TQTQCS Trigger: AGAGCACTGTGTCTGAGTTCATCCTTCTGGGGCTCC...TATTATAAATAAGGCTGCTAGGAACATAGTGGAGCATGTGTCCTTCTTACTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCGCATCTTTGGAGCTGTaGCTGATGAGAAAGAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: CSTYRVADPFSSLGTFSSASLEL*LMRKRY Trigger: ATATCTCTTTCTCATCAGTCACAGCTCCAAAGATGC...GCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAACCCAGCATATGAGATaGACTGACTGTGTGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRCPSTEEWIQKMWYIYTTQHMR*TDCVSA Trigger: TGCTGACACACAGTCAGTCCATCTCATATGCTGGGT...TGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCGTATTGTTTCTAAAGTaGGATAGGCAAGCCAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSTYRVADPFSSLGTFSSVLFLK*DRQAKR Trigger: TCTCTTGGCTTGCCTATCTCACTTTAGAAACAATAC...GCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCAGTGGCTATGGTGTTCATGGATTTCCACACCTGTGTCCAAGGCCACTTGATTAATGTTATTAGATaGGGGGACACAATACAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSVAMVFMDFHTCVQGHLINVIR*GDTIQS Trigger: GGACTGTATTGTGTCCCCTCATCTAATAACATTAAT...CAAGTGGCCTTGGACACAGGTGTGGAAATCCATGAACACCATAGCCACTGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CAA 72 bp | CACAGCCCTTTTCACCACCTAGAACCTGTACCCATATaGTCTACCTTATATCAATGGACCACTGAGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSPFHHLEPVPI*STLYQWTTEFG Trigger: TCCAAACTCAGTGGTCCATTGATATAAGGTAGACAATATGGGTACAGGTTCTAGGTGGTGAAAAGGGCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAGCATCTTTGGAGCTGTaGCTGATGAGAAAGAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: PRCPSTEEWIQKMWYIYTASLEL*LMRKRY Trigger: ATATCTCTTTCTCATCAGTCACAGCTCCAAAGATGC...TGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCATTAATGTTATTAGATaGGGGGACACAATACAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSTYRVADPFSSLGTFSSINVIR*GDTIQS Trigger: GGACTGTATTGTGTCCCCTCATCTAATAACATTAAT...GCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CAA 72 bp | AATGAACCCCACCCTGCAGTAACCATAACCAGTTCATaGGTGGTGTGTCTGAGATACAGTATCTATTTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NEPHPAVTITSS*VVCLRYSIYLS Trigger: GCTTAAATAGATACTGTATCTCAGACACACCACCAATGAACTGGTTATGGTTACTGCAGGGTGGGGTTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CAA 72 bp | GATCTTATGAACAGGTACCTAGCAACCCACACTGTTTaGTTCCTCCTGCTGAACTTTCTACCTAGCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: DLMNRYLATHTV*FLLLNFLPSQY Trigger: ATATTGGCTAGGTAGAAAGTTCAGCAGGAGGAACAAAACAGTGTGGGTTGCTAGGTACCTGTTCATAAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR GCA 90 bp | TGGGAACAAAACACCCATGGAAAGAGTTACAGAGATAAAATTTGGAGCTGTGAAGCCAAGAGAAGGGTGTaGACAAGGCAATTTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WEQNTHGKSYRDKIWSCEAKRRV*TRQFAE Trigger: TTCTGCAAATTGCCTTGTGCACACCCTTCTCTTGGC...TTCACAGCTCCAAATTTTATCTCTGTAACTCTTTCCATGGGTGTTTTGTTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR CCA 90 bp | TGGGAACAAAACACCCATGGAAAGAGTTACAGAGATAAAATTTGGAGCTGTGAAACCCAGCATATGAGATaGACTGACTGTGTGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WEQNTHGKSYRDKIWSCETQHMR*TDCVSA Trigger: TGCTGACACACAGTCAGTCCATCTCATATGCTGGGT...TTCACAGCTCCAAATTTTATCTCTGTAACTCTTTCCATGGGTGTTTTGTTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CAA 72 bp | ACTTTACATAAACTTGATCTCCTTAAACAAAGAAGTTaGCACAGCCCTTTTCACCACCTAGAACCTGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: TLHKLDLLKQRS*HSPFHHLEPVP Trigger: GGGTACAGGTTCTAGGTGGTGAAAAGGGCTGTGCAAACTTCTTTGTTTAAGGAGATCAAGTTTATGTAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR TCA 90 bp | ACCAGTAAGAAGGACACATGCTCCACTATGTTCCTAGCAGCCTTATTTATAATAGTATTGTTTCTAAAGTaGGATAGGCAAGCCAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSKKDTCSTMFLAALFIIVLFLK*DRQAKR Trigger: TCTCTTGGCTTGCCTATCTCACTTTAGAAACAATAC...TATTATAAATAAGGCTGCTAGGAACATAGTGGAGCATGTGTCCTTCTTACTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR CCA 90 bp | TGGGAACAAAACACCCATGGAAAGAGTTACAGAGATAAAATTTGGAGCTGTGAAACCTGTCATATGCCATaGAAGTCAGAAGAAAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: WEQNTHGKSYRDKIWSCETCHMP*KSEESY Trigger: ATAGCTTTCTTCTGACTTCCATGGCATATGACAGGT...TTCACAGCTCCAAATTTTATCTCTGTAACTCTTTCCATGGGTGTTTTGTTCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGTAAGAAGGACACATGCTCCACTATGTTCCTAGCAGCCTTATTTATAATAACCTGTCATATGCCATaGAAGTCAGAAGAAAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: TSKKDTCSTMFLAALFIITCHMP*KSEESY Trigger: ATAGCTTTCTTCTGACTTCCATGGCATATGACAGGT...TATTATAAATAAGGCTGCTAGGAACATAGTGGAGCATGTGTCCTTCTTACTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| 3UTR CAA 72 bp | AATGAAATGATGTCACTTATAGGAATTTTAACTGCCTaGTCAGCCATAAGTGATTACTTACAAAGTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NEMMSLIGILTA*SAISDYLQSLG Trigger: GCCAAGACTTTGTAAGTAATCACTTATGGCTGACAAGGCAGTTAAAATTCCTATAAGTGACATCATTTCATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR CAA 90 bp | AACCATTGGACTGAGCACTGGGTCCCTGATGGAGGAGTGGGAGAAGGGACTGAAGGCAGAGTACACAGCTaGATCCTCTGCTCGAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: NHWTEHWVPDGGVGEGTEGRVHS*ILCSNG Trigger: CCCATTCGAGCAGAGGATCAAGCTGTGTACTCTGCC...TTCAGTCCCTTCTCCCACTCCTCCATCAGGGACCCAGTGCTCAGTCCAATGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS GCA 90 bp | CAGGTACAGAACCAGGAACAAGGCAGAGTACACAGCTTGATCCTCTaGTCGAATGGGGAGCCCCAGAAGGATGAACTCAGACACAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QVQNQEQGRVHSLIL*SNGEPQKDELRHSA Trigger: AGCACTGTGTCTGAGTTCATCCTTCTGGGGCTCCCCATTCGAGCAGAGGATCAAGCTGTGTACTCTGCCTTGTTCCTGGTTCTGTACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072114.4 ENSMUST00000091006.2 ENSMUST00000217511.2 |
||
| CDS-3UTR CAA 90 bp | GTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTGGCAGAGTACACAGCTaGATCCTCTGCTCGAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPPIGLQIPLAPWVLSLAGRVHS*ILCSNG Trigger: CCCATTCGAGCAGAGGATCAAGCTGTGTACTCTGCC...AGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR CAA 90 bp | TGGGAACAAAACACCCATGGAAAGAGTTACAGAGATAAAATTTGGAGCTGTGAAGCTTTGCAGATTCCCTaGATGGAGGGAGCTTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: WEQNTHGKSYRDKIWSCEALQIP*MEGAFI Trigger: TATGAAAGCTCCCTCCATCAAGGGAATCTGCAAAGC...TTCACAGCTCCAAATTTTATCTCTGTAACTCTTTCCATGGGTGTTTTGTTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS-3UTR CAA 90 bp | ACCAGTAAGAAGGACACATGCTCCACTATGTTCCTAGCAGCCTTATTTATAATAGCTTTGCAGATTCCCTaGATGGAGGGAGCTTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: TSKKDTCSTMFLAALFIIALQIP*MEGAFI Trigger: TATGAAAGCTCCCTCCATCAAGGGAATCTGCAAAGC...TATTATAAATAAGGCTGCTAGGAACATAGTGGAGCATGTGTCCTTCTTACTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072114.4 ENSMUST00000217511.2 |
||
| CDS TCA 90 bp | ATGCCATGGAAGTCAGAAGAAAGCTATCAATGCCTGCAAAAACTGTaGAAAAATACTCCTGGGAAATACACCCAGCATATGAGATGGACT | + |
|
Preference number: 5 (lower is better) Translates to: MPWKSEESYQCLQKL*KNTPGKYTQHMRWT Trigger: AGTCCATCTCATATGCTGGGTGTATTTCCCAGGAGTATTTTTTCACAGTTTTTGCAGGCATTGATAGCTTTCTTCTGACTTCCATGGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000072114.4 ENSMUST00000091006.2 ENSMUST00000217511.2 |
||
| CDS TCA 90 bp | GTACATCACAGACACAATGGCATTATTCTCATTAATGTTATTAGATaGGGGGACACAATACAGTCCAATGATGGACCCAAAGTACAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VHHRHNGIILINVIR*GDTIQSNDGPKVQG Trigger: TCCTTGTACTTTGGGTCCATCATTGGACTGTATTGTGTCCCCTCATCTAATAACATTAATGAGAATAATGCCATTGTGTCTGTGATGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072114.4 ENSMUST00000091006.2 ENSMUST00000217511.2 |
||
| CDS CAA 72 bp | CAGGTACAGAACCAGGAACAAGGCAGAGTACACAGCTaGATCCTCTGCTCGAATGGGGAGCCCCAGAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: QVQNQEQGRVHS*ILCSNGEPQKD Trigger: ATCCTTCTGGGGCTCCCCATTCGAGCAGAGGATCAAGCTGTGTACTCTGCCTTGTTCCTGGTTCTGTACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072114.4 ENSMUST00000091006.2 ENSMUST00000217511.2 |
||
| CDS CAA 72 bp | ATAGGCAAGCCAAGAGAAGGGTGTGCACAAGGCAATTaGCAGAAGATAAGGCCCAGGACACAACTACTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: IGKPREGCAQGN*QKIRPRTQLLE Trigger: TTCTAGTAGTTGTGTCCTGGGCCTTATCTTCTGCAAATTGCCTTGTGCACACCCTTCTCTTGGCTTGCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072114.4 ENSMUST00000091006.2 ENSMUST00000217511.2 |
||
| CDS TCA 72 bp | CTAATGACCACATTACCTAAAACAAGGATGACCAGTTaGTTGATGGTGGTGTCTGAGCTGGACAGCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LMTTLPKTRMTS*LMVVSELDSFS Trigger: GCTGAAGCTGTCCAGCTCAGACACCACCATCAATCAACTGGTCATCCTTGTTTTAGGTAATGTGGTCATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072114.4 ENSMUST00000091006.2 ENSMUST00000217511.2 |
||
| CDS CCA 72 bp | AAAAATACTCCTGGGAAATACACCCAGCATATGAGATaGACTGACTGTGTGTCAGCATATTCACGAGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: KNTPGKYTQHMR*TDCVSAYSRAS Trigger: AGATGCTCGTGAATATGCTGACACACAGTCAGTCCATCTCATATGCTGGGTGTATTTCCCAGGAGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072114.4 ENSMUST00000091006.2 ENSMUST00000217511.2 |
||
| CDS TCA 72 bp | AAGTCAGAAGAAAGCTATCAATGCCTGCAAAAACTGTaGAAAAATACTCCTGGGAAATACACCCAGCATATG | + |
|
Preference number: 6 (lower is better) Translates to: KSEESYQCLQKL*KNTPGKYTQHM Trigger: CATATGCTGGGTGTATTTCCCAGGAGTATTTTTTCACAGTTTTTGCAGGCATTGATAGCTTTCTTCTGACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000072114.4 ENSMUST00000091006.2 ENSMUST00000217511.2 |
||
| CDS TCA 72 bp | AGACACAATGGCATTATTCTCATTAATGTTATTAGATaGGGGGACACAATACAGTCCAATGATGGACCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RHNGIILINVIR*GDTIQSNDGPK Trigger: TTTGGGTCCATCATTGGACTGTATTGTGTCCCCTCATCTAATAACATTAATGAGAATAATGCCATTGTGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072114.4 ENSMUST00000091006.2 ENSMUST00000217511.2 |
||