Pregenerated sensors for OLFR332 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050813Ensembl transcript IDs: ENSMUST00000180165.3
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCGAACCGCTACAGGCACCGTGGGGGATGATCATTGTTCCCTGCTaGAACCAGAACACGAAATGCATTTATATCAACACTACGATTGAC | + |
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Preference number: 1 (lower is better) Translates to: FEPLQAPWGMIIVPC*NQNTKCIYINTTID Trigger: GTCAATCGTAGTGTTGATATAAATGCATTTCGTGTTCTGGTTCCAGCAGGGAACAATGATCATCCCCCACGGTGCCTGTAGCGGTTCGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR CCA 90 bp | ATAAATAAATTTACTATAACTGCTCACACACTGGTTGAACTTTATTaGCTTACAGTGAATGCATACAGTGCCCGTAACAGCTGCTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: INKFTITAHTLVELY*LTVNAYSARNSCWL Trigger: CAGCCAGCAGCTGTTACGGGCACTGTATGCATTCACTGTAAGCCAATAAAGTTCAACCAGTGTGTGAGCAGTTATAGTAAATTTATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR GCA 90 bp | AGTGATGCGTTCAGTCAGAAGAAAGAAGGATTTAATTGCATAGATTaGTTCAAGGGACTAAGCGAGAGTAAAAATGTGAAAAGGAGATAC | + |
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Preference number: 1 (lower is better) Translates to: SDAFSQKKEGFNCID*FKGLSESKNVKRRY Trigger: GTATCTCCTTTTCACATTTTTACTCTCGCTTAGTCCCTTGAAGCAATCTATGCAATTAAATCCTTCTTTCTTCTGACTGAACGCATCACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR-3UTR TCA 90 bp | GTTCGAACCGCTACAGGCACCGTGGGGGATGATCATTGTTCCCTGCTGGAACCACCCCAGAAAGCACACTaGGTATCATTTCTGTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: VRTATGTVGDDHCSLLEPPQKAH*VSFLCW Trigger: CCAGCACAGAAATGATACTCAGTGTGCTTTCTGGGG...TGGTTCCAGCAGGGAACAATGATCATCCCCCACGGTGCCTGTAGCGGTTCGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR-3UTR TCA 90 bp | GTTCGAACCGCTACAGGCACCGTGGGGGATGATCATTGTTCCCTGCTGGAACCAGGACTTGTGTCTCAATaGATTAGAAACCCTTCGCCT | + |
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Preference number: 2 (lower is better) Translates to: VRTATGTVGDDHCSLLEPGLVSQ*IRNPSP Trigger: AGGCGAAGGGTTTCTAATTCATTGAGACACAAGTCC...TGGTTCCAGCAGGGAACAATGATCATCCCCCACGGTGCCTGTAGCGGTTCGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR-3UTR TCA 90 bp | GGGAACGGTCTGAGTGGAAAGGAGGGGCGGTGCTTAAGGATGGTCACTGGTCACGCGAGAGTAAAAATGTaGAAAGGAGATACTAACAGG | + |
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Preference number: 2 (lower is better) Translates to: GNGLSGKEGRCLRMVTGHARVKM*KGDTNR Trigger: CCTGTTAGTATCTCCTTTTCACATTTTTACTCTCGC...GTGACCAGTGACCATCCTTAAGCACCGCCCCTCCTTTCCACTCAGACCGTTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR-3UTR CCA 90 bp | GGGAACGGTCTGAGTGGAAAGGAGGGGCGGTGCTTAAGGATGGTCACTGGTCACACAGCAAATAGGTTCTaGACTTGTGTCTCAATGAAT | + |
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Preference number: 2 (lower is better) Translates to: GNGLSGKEGRCLRMVTGHTANRF*TCVSMN Trigger: ATTCATTGAGACACAAGTCCAGAACCTATTTGCTGT...GTGACCAGTGACCATCCTTAAGCACCGCCCCTCCTTTCCACTCAGACCGTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR-3UTR GCA 90 bp | GGGAACGGTCTGAGTGGAAAGGAGGGGCGGTGCTTAAGGATGGTCACTGGTCACGATAAATATAAAAGATaGACTAAGGGCTCACGGAAA | + |
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Preference number: 2 (lower is better) Translates to: GNGLSGKEGRCLRMVTGHDKYKR*TKGSRK Trigger: TTTCCGTGAGCCCTTAGTGCATCTTTTATATTTATC...GTGACCAGTGACCATCCTTAAGCACCGCCCCTCCTTTCCACTCAGACCGTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR-3UTR CCA 90 bp | AGTAAACAGAGTTTCATCCAAGAGGGCTTCTATGAAAGGAAATTAGAGGTGTACAACCGTGGGAGCCCCTaGGCTTCTAAAGTGAAAATT | + |
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Preference number: 2 (lower is better) Translates to: SKQSFIQEGFYERKLEVYNRGSP*ASKVKI Trigger: AATTTTCACTTTAGAAGCCCAGGGGCTCCCACGGTT...GTACACCTCTAATTTCCTTTCATAGAAGCCCTCTTGGATGAAACTCTGTTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR-3UTR TCA 90 bp | AGTAAACAGAGTTTCATCCAAGAGGGCTTCTATGAAAGGAAATTAGAGGTGTACGTTATTTTTAAGAGGTaGTTGTGTGAGAAGGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SKQSFIQEGFYERKLEVYVIFKR*LCEKGP Trigger: AGGCCCCTTCTCACACAATCACCTCTTAAAAATAAC...GTACACCTCTAATTTCCTTTCATAGAAGCCCTCTTGGATGAAACTCTGTTTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR-3UTR TCA 90 bp | AGTAAACAGAGTTTCATCCAAGAGGGCTTCTATGAAAGGAAATTAGAGGTGTACCTAACAGAAAGCATCTaGAATGATGACGATTTCGCT | + |
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Preference number: 2 (lower is better) Translates to: SKQSFIQEGFYERKLEVYLTESI*NDDDFA Trigger: AGCGAAATCGTCATCATTTCAGATGCTTTCTGTTAG...GTACACCTCTAATTTCCTTTCATAGAAGCCCTCTTGGATGAAACTCTGTTTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR TCA 72 bp | CTTAAGTGTTCGAACCGCTACAGGCACCGTGGGGGATaGTCATTGTTCCCTGCTGGAACCAGAACACGAAAT | + |
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Preference number: 3 (lower is better) Translates to: LKCSNRYRHRGG*SLFPAGTRTRN Trigger: ATTTCGTGTTCTGGTTCCAGCAGGGAACAATGATCATCCCCCACGGTGCCTGTAGCGGTTCGAACACTTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR TCA 72 bp | CTGCTCACACACTGGTTGAACTTTATTGGCTTACAGTaGATGCATACAGTGCCCGTAACAGCTGCTGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: LLTHWLNFIGLQ*MHTVPVTAAGW Trigger: CCAGCCAGCAGCTGTTACGGGCACTGTATGCATTCACTGTAAGCCAATAAAGTTCAACCAGTGTGTGAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR TCA 72 bp | TCTCCCGAAGATGAAGGTTTGCTAACATACATTTTGTaGCATAAAGCCACCTCAACCACGACACGAGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: SPEDEGLLTYIL*HKATSTTTRAW Trigger: CCAGGCTCGTGTCGTGGTTGAGGTGGCTTTATGTCACAAAATGTATGTTAGCAAACCTTCATCTTCGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR CCA 72 bp | CTACAGGCACCGTGGGGGATGATCATTGTTCCCTGCTaGAACCAGAACACGAAATGCATTTATATCAACACT | + |
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Preference number: 3 (lower is better) Translates to: LQAPWGMIIVPC*NQNTKCIYINT Trigger: AGTGTTGATATAAATGCATTTCGTGTTCTGGTTCCAGCAGGGAACAATGATCATCCCCCACGGTGCCTGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR-3UTR CAA 90 bp | CTGCCCAGTGTGATCAGTGATGCGTTCAGTCAGAAGAAAGAAGGATTTAATTGCGCCGTGTGGATCAACTaGGGAAAGATAGAACAGCAA | + |
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Preference number: 3 (lower is better) Translates to: LPSVISDAFSQKKEGFNCAVWIN*GKIEQQ Trigger: TTGCTGTTCTATCTTTCCCAAGTTGATCCACACGGC...GCAATTAAATCCTTCTTTCTTCTGACTGAACGCATCACTGATCACACTGGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR TCA 72 bp | GATCAGGAGGGCAATTGTCACACACAAAGCTTTCCTTaGGACTGTATTCTTAAGTGTTCGAACCGCTACAGG | + |
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Preference number: 3 (lower is better) Translates to: DQEGNCHTQSFP*DCILKCSNRYR Trigger: CCTGTAGCGGTTCGAACACTTAAGAATACAGTCTCAAGGAAAGCTTTGTGTGTGACAATTGCCCTCCTGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR GCA 72 bp | AGTGATGCGTTCAGTCAGAAGAAAGAAGGATTTAATTaGATAGATTGCTTCAAGGGACTAAGCGAGAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: SDAFSQKKEGFN*IDCFKGLSESK Trigger: TTTACTCTCGCTTAGTCCCTTGAAGCAATCTATGCAATTAAATCCTTCTTTCTTCTGACTGAACGCATCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR GCA 72 bp | ATGATCATTGTTCCCTGCTGGAACCAGAACACGAAATaGATTTATATCAACACTACGATTGACATGCTAAAT | + |
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Preference number: 3 (lower is better) Translates to: MIIVPCWNQNTK*IYINTTIDMLN Trigger: ATTTAGCATGTCAATCGTAGTGTTGATATAAATGCATTTCGTGTTCTGGTTCCAGCAGGGAACAATGATCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR GCA 72 bp | GACTTGTGTCTCAATGAATTAGAAACCCTTCGCCTTTaGACAGATGTCATCGTAATTTTACAAATAAACACT | + |
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Preference number: 3 (lower is better) Translates to: DLCLNELETLRL*TDVIVILQINT Trigger: AGTGTTTATTTGTAAAATTACGATGACATCTGTGCAAAGGCGAAGGGTTTCTAATTCATTGAGACACAAGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS-3UTR GCA 90 bp | GGGAACGGTCTGAGTGGAAAGGAGGGGCGGTGCTTAAGGATGGTCACTGGTCACGGAGGTTTGGGTACCTaGAGCTGGGAAAGAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GNGLSGKEGRCLRMVTGHGGLGT*SWERAP Trigger: TGGGGCTCTTTCCCAGCTGCAGGTACCCAAACCTCC...GTGACCAGTGACCATCCTTAAGCACCGCCCCTCCTTTCCACTCAGACCGTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS-3UTR GCA 90 bp | GTTCGAACCGCTACAGGCACCGTGGGGGATGATCATTGTTCCCTGCTGGAACCAGGTATGAACGAGGGCTaGGGCAACTGCTCCGATCCA | + |
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Preference number: 4 (lower is better) Translates to: VRTATGTVGDDHCSLLEPGMNEG*GNCSDP Trigger: TGGATCGGAGCAGTTGCCGCAGCCCTCGTTCATACC...TGGTTCCAGCAGGGAACAATGATCATCCCCCACGGTGCCTGTAGCGGTTCGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS-3UTR GCA 90 bp | GGGAACGGTCTGAGTGGAAAGGAGGGGCGGTGCTTAAGGATGGTCACTGGTCACGAAGTAGTTGATGGCTaGCTTGGGCACTGTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GNGLSGKEGRCLRMVTGHEVVDG*LGHCAG Trigger: TCCTGCACAGTGCCCAAGGCAGCCATCAACTACTTC...GTGACCAGTGACCATCCTTAAGCACCGCCCCTCCTTTCCACTCAGACCGTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS-3UTR CCA 90 bp | AACGGTCTGAGTGGAAAGGAGGGGCGGTGCTTAAGGATGGTCACTGGTCACGTTAGGAAAACATCTGAGTaGCACAGGCAAAGAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: NGLSGKEGRCLRMVTGHVRKTSE*HRQRRR Trigger: TCTCCTTCTTTGCCTGTGCCACTCAGATGTTTTCCT...AACGTGACCAGTGACCATCCTTAAGCACCGCCCCTCCTTTCCACTCAGACCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS-3UTR CCA 90 bp | CTGCCCAGTGTGATCAGTGATGCGTTCAGTCAGAAGAAAGAAGGATTTAATTGCTCCTGGTCGGGTGTGTaGGAAGAAGTGGGCGTCATG | + |
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Preference number: 4 (lower is better) Translates to: LPSVISDAFSQKKEGFNCSWSGV*EEVGVM Trigger: CATGACGCCCACTTCTTCCCACACACCCGACCAGGA...GCAATTAAATCCTTCTTTCTTCTGACTGAACGCATCACTGATCACACTGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS-3UTR GCA 90 bp | TTAAAGTCCCACACAGTAAATCCCATGTCACCATGTGATCTTTTCTCCCGAAGATGGGGGTCACTATGGTaGCCAGCACAGCACCTACCT | + |
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Preference number: 4 (lower is better) Translates to: LKSHTVNPMSPCDLFSRRWGSLW*PAQHLP Trigger: AGGTAGGTGCTGTGCTGGGCACCATAGTGACCCCCA...TCTTCGGGAGAAAAGATCACATGGTGACATGGGATTTACTGTGTGGGACTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS-3UTR GCA 90 bp | AGTAAACAGAGTTTCATCCAAGAGGGCTTCTATGAAAGGAAATTAGAGGTGTACCACGGCTGCAGCATCTaGCGGTGCACTTCTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SKQSFIQEGFYERKLEVYHGCSI*RCTSAG Trigger: CCCTGCAGAAGTGCACCGGCAGATGCTGCAGCCGTG...GTACACCTCTAATTTCCTTTCATAGAAGCCCTCTTGGATGAAACTCTGTTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS-3UTR TCA 90 bp | CTGCCCAGTGTGATCAGTGATGCGTTCAGTCAGAAGAAAGAAGGATTTAATTGCCAGCAAGGCCAAGGGTaGGGAAGGAAAACATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LPSVISDAFSQKKEGFNCQQGQG*GRKTSE Trigger: CTCAGATGTTTTCCTTCCTCACCCTTGGCCTTGCTG...GCAATTAAATCCTTCTTTCTTCTGACTGAACGCATCACTGATCACACTGGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS-3UTR TCA 90 bp | CTGCCCAGTGTGATCAGTGATGCGTTCAGTCAGAAGAAAGAAGGATTTAATTGCCACAGAAGTAATGGTTaGTCTCCCTGGAGCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: LPSVISDAFSQKKEGFNCHRSNG*SPWSHR Trigger: TCTGTGGCTCCAGGGAGATCAACCATTACTTCTGTG...GCAATTAAATCCTTCTTTCTTCTGACTGAACGCATCACTGATCACACTGGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS-3UTR CCA 90 bp | AGTAAACAGAGTTTCATCCAAGAGGGCTTCTATGAAAGGAAATTAGAGGTGTACGCATGGGGGTCACTATaGTGCCCAGCACAGCACCTA | + |
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Preference number: 4 (lower is better) Translates to: SKQSFIQEGFYERKLEVYAWGSL*CPAQHL Trigger: TAGGTGCTGTGCTGGGCACCATAGTGACCCCCATGC...GTACACCTCTAATTTCCTTTCATAGAAGCCCTCTTGGATGAAACTCTGTTTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS-3UTR TCA 90 bp | TTAAAGTCCCACACAGTAAATCCCATGTCACCATGTGATCTTTTCTCCCGAAGAAGACCTTGGGGCTCATaGGAATGGTATACCTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LKSHTVNPMSPCDLFSRRRPWGS*EWYTSE Trigger: CTCTGAGGTATACCATTCTCATGAGCCCCAAGGTCT...TCTTCGGGAGAAAAGATCACATGGTGACATGGGATTTACTGTGTGGGACTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| 3UTR CAA 72 bp | CAGAAAGCATCTGAAATGATGACGATTTCGCTGCTTTaGAAGGTCCTTGTAAATCCCCACAATCGAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: QKASEMMTISLL*KVLVNPHNRVQ Trigger: CTGCACTCGATTGTGGGGATTTACAAGGACCTTCAAAAGCAGCGAAATCGTCATCATTTCAGATGCTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS-3UTR GCA 90 bp | CATTTGGATCCATTATCAGTTCTTGCATGTAACACCCTGCCTTTAGTCACAGATTTAGTGTCAGTAAGATaGACTCAGCAAGGCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: HLDPLSVLACNTLPLVTDLVSVR*TQQGQG Trigger: CCCTTGGCCTTGCTGAGTGCATCTTACTGACACTAA...ATCTGTGACTAAAGGCAGGGTGTTACATGCAAGAACTGATAATGGATCCAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS-3UTR TCA 90 bp | AGTAAACAGAGTTTCATCCAAGAGGGCTTCTATGAAAGGAAATTAGAGGTGTACAAGTCAGGATCAAAGTaGATGGGGTCAGGAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: SKQSFIQEGFYERKLEVYKSGSK*MGSGER Trigger: TCTTTCTCCTGACCCCATTCACTTTGATCCTGACTT...GTACACCTCTAATTTCCTTTCATAGAAGCCCTCTTGGATGAAACTCTGTTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS-3UTR CCA 90 bp | CATTTGGATCCATTATCAGTTCTTGCATGTAACACCCTGCCTTTAGTCACAGATCAGGATCAAAGTGAATaGGGTCAGGAGAAAGATAAT | + |
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Preference number: 4 (lower is better) Translates to: HLDPLSVLACNTLPLVTDQDQSE*GQEKDN Trigger: ATTATCTTTCTCCTGACCCCATTCACTTTGATCCTG...ATCTGTGACTAAAGGCAGGGTGTTACATGCAAGAACTGATAATGGATCCAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS-3UTR TCA 90 bp | CATTTGGATCCATTATCAGTTCTTGCATGTAACACCCTGCCTTTAGTCACAGATGAGAAAGATAATAGTTaGCACAAACTTCACCATCTC | + |
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Preference number: 4 (lower is better) Translates to: HLDPLSVLACNTLPLVTDEKDNS*HKLHHL Trigger: GAGATGGTGAAGTTTGTGTCAACTATTATCTTTCTC...ATCTGTGACTAAAGGCAGGGTGTTACATGCAAGAACTGATAATGGATCCAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS GCA 90 bp | GGCAAAGAAGGAGATGTTCTGCCTCCCGGTGAAGTAGTTGATGGCTaGCTTGGGCACTGTGCAGGAGATATAAGCCAGGTCAATGACAGA | + |
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Preference number: 5 (lower is better) Translates to: GKEGDVLPPGEVVDG*LGHCAGDISQVNDR Trigger: TCTGTCATTGACCTGGCTTATATCTCCTGCACAGTGCCCAAGGCAGCCATCAACTACTTCACCGGGAGGCAGAACATCTCCTTCTTTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS-3UTR CAA 90 bp | TTAAAGTCCCACACAGTAAATCCCATGTCACCATGTGATCTTTTCTCCCGAAGAGCTTTATTCCGCCCCTaGGGAGAGTTCATCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LKSHTVNPMSPCDLFSRRALFRP*GEFILR Trigger: CCTCAGGATGAACTCTCCCAAGGGGCGGAATAAAGC...TCTTCGGGAGAAAAGATCACATGGTGACATGGGATTTACTGTGTGGGACTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS TCA 90 bp | GGAAGTCAGGATCAAAGTGAATGGGGTCAGGAGAAAGATAATAGTTaGCACAAACTTCACCATCTCGTAGACAGATGTATCCACACAAGA | + |
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Preference number: 5 (lower is better) Translates to: GSQDQSEWGQEKDNS*HKLHHLVDRCIHTR Trigger: TCTTGTGTGGATACATCTGTCTACGAGATGGTGAAGTTTGTGTCAACTATTATCTTTCTCCTGACCCCATTCACTTTGATCCTGACTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS GCA 72 bp | GAGTGCAGCACCGGAGGGAGCCGACTCTATCACGGCTaGAGCATCTGCCGGTGCACTTCTGCAGGGCCCCTA | + |
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Preference number: 6 (lower is better) Translates to: ECSTGGSRLYHG*SICRCTSAGPL Trigger: TAGGGGCCCTGCAGAAGTGCACCGGCAGATGCTGCAGCCGTGATAGAGTCGGCTCCCTCCGGTGCTGCACTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS GCA 72 bp | GGGAGCCGACTCTATCACGGCTGCAGCATCTGCCGGTaGACTTCTGCAGGGCCCCTATCACTTCCTTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: GSRLYHGCSICR*TSAGPLSLPCF Trigger: GAAACAAGGAAGTGATAGGGGCCCTGCAGAAGTGCACCGGCAGATGCTGCAGCCGTGATAGAGTCGGCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS GCA 72 bp | GGAGATGTTCTGCCTCCCGGTGAAGTAGTTGATGGCTaGCTTGGGCACTGTGCAGGAGATATAAGCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: GDVLPPGEVVDG*LGHCAGDISQV Trigger: GACCTGGCTTATATCTCCTGCACAGTGCCCAAGGCAGCCATCAACTACTTCACCGGGAGGCAGAACATCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS CCA 72 bp | GGTGTAGATGAGGAGGATGAAGGAGATAAGGAGGTTTaGGTACCTGCAGCTGGGAAAGAGCCCCAGCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: GVDEEDEGDKEV*VPAAGKEPQQD Trigger: ATCCTGCTGGGGCTCTTTCCCAGCTGCAGGTACCCAAACCTCCTTATCTCCTTCATCCTCCTCATCTACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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| CDS TCA 72 bp | GATCAAAGTGAATGGGGTCAGGAGAAAGATAATAGTTaGCACAAACTTCACCATCTCGTAGACAGATGTATC | + |
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Preference number: 6 (lower is better) Translates to: DQSEWGQEKDNS*HKLHHLVDRCI Trigger: GATACATCTGTCTACGAGATGGTGAAGTTTGTGTCAACTATTATCTTTCTCCTGACCCCATTCACTTTGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180165.3 |
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