Pregenerated sensors for OLFR329 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064252Ensembl transcript IDs: ENSMUST00000108822.8, ENSMUST00000108823.3, ENSMUST00000219448.2
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCATTGCTCACTGTAGTTTCTGTCAGTATCCCTGTGACAATCAGGTaGCACCTTTTGGAGTATACTGGCTTCTCAGAAGGCTTGCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: SLLTVVSVSIPVTIR*HLLEYTGFSEGLLP Trigger: GGGAAGCAAGCCTTCTGAGAAGCCAGTATACTCCAAAAGGTGTCACCTGATTGTCACAGGGATACTGACAGAAACTACAGTGAGCAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR CCA 90 bp | TGTCAGTATCCCTGTGACAATCAGGTGACACCTTTTGGAGTATACTaGCTTCTCAGAAGGCTTGCTTCCCTGACGCTAGAAGCTTTACAT | + |
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Preference number: 1 (lower is better) Translates to: CQYPCDNQVTPFGVY*LLRRLASLTLEALH Trigger: ATGTAAAGCTTCTAGCGTCAGGGAAGCAAGCCTTCTGAGAAGCCAGTATACTCCAAAAGGTGTCACCTGATTGTCACAGGGATACTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR GCA 90 bp | AACCAGTCAATTTCCCTGCATCCTATGTGTCCACTTTGCACAGCATaGTATCTGCAGTTGAGGCAAGAAAAACTTTTGTCCTGGTTGCTA | + |
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Preference number: 1 (lower is better) Translates to: NQSISLHPMCPLCTA*YLQLRQEKLLSWLL Trigger: TAGCAACCAGGACAAAAGTTTTTCTTGCCTCAACTGCAGATAGCATGCTGTGCAAAGTGGACACATAGGATGCAGGGAAATTGACTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR CAA 90 bp | TCCCTGCATCCTATGTGTCCACTTTGCACAGCATGCTATCTGCAGTaGAGGCAAGAAAAACTTTTGTCCTGGTTGCTAGCTTGCCACATA | + |
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Preference number: 2 (lower is better) Translates to: SLHPMCPLCTACYLQ*RQEKLLSWLLACHI Trigger: TATGTGGCAAGCTAGCAACCAGGACAAAAGTTTTTCTTGCCTCAACTGCAGATAGCATGCTGTGCAAAGTGGACACATAGGATGCAGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTTAGTCTTAAGAAAGCTAGCTGTAACATGTATTGTCCAGGTCACCACAGGTCTGCACTTGGCAAACTaGTTAGAACGCCTGGGAACA | + |
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Preference number: 2 (lower is better) Translates to: WLVLRKLAVTCIVQVTTGLHLAN*LERLGT Trigger: TGTTCCCAGGCGTTCTAATCAGTTTGCCAAGTGCAG...ACCTGTGGTGACCTGGACAATACATGTTACAGCTAGCTTTCTTAAGACTAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR-3UTR CCA 90 bp | GGACAAAGCCAAACACACATTAAAGACTCTGCACTTGGCAAACTGATTAGAACGCCTTTTGGAGTATACTaGCTTCTCAGAAGGCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: GQSQTHIKDSALGKLIRTPFGVY*LLRRLA Trigger: AGCAAGCCTTCTGAGAAGCCAGTATACTCCAAAAGG...CGTTCTAATCAGTTTGCCAAGTGCAGAGTCTTTAATGTGTGTTTGGCTTTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTTAGTCTTAAGAAAGCTAGCTGTAACATGTATTGTCCAGGTCACCACAGGTTCAGGTGACACCTTTTaGAGTATACTGGCTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: WLVLRKLAVTCIVQVTTGSGDTF*SILASQ Trigger: CTGAGAAGCCAGTATACTCCAAAAGGTGTCACCTGA...ACCTGTGGTGACCTGGACAATACATGTTACAGCTAGCTTTCTTAAGACTAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGAACGCCTGGGAACATGGAGCTTTAGAACATTACAGAGAGAGAGCCCACTTTGGCTCAAGAATATGTaGTTCCTCATGTCCTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: LERLGTWSFRTLQRESPLWLKNM*FLMSLN Trigger: ATTTAAGGACATGAGGAATCACATATTCTTGAGCCA...AAGTGGGCTCTCTCTCTGTAATGTTCTAAAGCTCCATGTTCCCAGGCGTTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR-3UTR GCA 90 bp | GATTTCAAACCAAAGTTAATCAAAGGAGACAGGGAAGAACACTTAACATTCGTCGTAAACATGAGACACTaGACTAGGCTCTCAGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: DFKPKLIKGDREEHLTFVVNMRH*TRLSED Trigger: GTCCTCTGAGAGCCTAGTGCAGTGTCTCATGTTTAC...GACGAATGTTAAGTGTTCTTCCCTGTCTCCTTTGATTAACTTTGGTTTGAAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAGAAAATTGGTTAGTCTTAAGAAAGCTAGCTGTAACATGTATTGTCCAGGTAGGATGAGGAATAAGTaGAGCATGAGTCCCATATCA | + |
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Preference number: 2 (lower is better) Translates to: QRKLVSLKKASCNMYCPGRMRNK*SMSPIS Trigger: TGATATGGGACTCATGCTGCACTTATTCCTCATCCT...ACCTGGACAATACATGTTACAGCTAGCTTTCTTAAGACTAACCAATTTTCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR-3UTR CCA 90 bp | GATTTCAAACCAAAGTTAATCAAAGGAGACAGGGAAGAACACTTAACATTCGTCGAAAAACTTTTGTCCTaGTTGCTAGCTTGCCACATA | + |
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Preference number: 2 (lower is better) Translates to: DFKPKLIKGDREEHLTFVEKLLS*LLACHI Trigger: TATGTGGCAAGCTAGCAACCAGGACAAAAGTTTTTC...GACGAATGTTAAGTGTTCTTCCCTGTCTCCTTTGATTAACTTTGGTTTGAAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR-3UTR CAA 90 bp | TTGCACAGCATGCTATCTGCAGTTGAGGCAAGAAAAACTTTTGTCCTGGTTGCTCTGACCTCCCTTAGTTaGTTTCCTCCCTGCCCAAGA | + |
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Preference number: 3 (lower is better) Translates to: LHSMLSAVEARKTFVLVALTSLS*FPPCPR Trigger: TCTTGGGCAGGGAGGAAACAAACTAAGGGAGGTCAG...AGCAACCAGGACAAAAGTTTTTCTTGCCTCAACTGCAGATAGCATGCTGTGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR GCA 72 bp | GACACCTTTTGGAGTATACTGGCTTCTCAGAAGGCTTaGTTCCCTGACGCTAGAAGCTTTACATATGACCAG | + |
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Preference number: 3 (lower is better) Translates to: DTFWSILASQKA*FPDARSFTYDQ Trigger: CTGGTCATATGTAAAGCTTCTAGCGTCAGGGAAGCAAGCCTTCTGAGAAGCCAGTATACTCCAAAAGGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR GCA 72 bp | GGCAGCAACAGACAAAAACGAACCAGTCAATTTCCCTaGATCCTATGTGTCCACTTTGCACAGCATGCTATC | + |
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Preference number: 3 (lower is better) Translates to: GSNRQKRTSQFP*ILCVHFAQHAI Trigger: GATAGCATGCTGTGCAAAGTGGACACATAGGATGCAGGGAAATTGACTGGTTCGTTTTTGTCTGTTGCTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCAATGCCTAGTGCTCACCTACAGCCCGGTCATCAAGGCAAAAACTAAACAGGTTATGACTTGTGACTaGTTTGTGCTTTGTAGCACT | + |
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Preference number: 3 (lower is better) Translates to: LQCLVLTYSPVIKAKTKQVMTCD*FVLCST Trigger: AGTGCTACAAAGCACAAACAAGTCACAAGTCATAAC...CTGTTTAGTTTTTGCCTTGATGACCGGGCTGTAGGTGAGCACTAGGCATTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR TCA 72 bp | GCCAAACACACATTAAAGACTCTGCACTTGGCAAACTaGTTAGAACGCCTGGGAACATGGAGCTTTAGAACA | + |
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Preference number: 3 (lower is better) Translates to: AKHTLKTLHLAN*LERLGTWSFRT Trigger: TGTTCTAAAGCTCCATGTTCCCAGGCGTTCTAATCAGTTTGCCAAGTGCAGAGTCTTTAATGTGTGTTTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR GCA 72 bp | AACCAGTCAATTTCCCTGCATCCTATGTGTCCACTTTaGACAGCATGCTATCTGCAGTTGAGGCAAGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: NQSISLHPMCPL*TACYLQLRQEK Trigger: TTTTTCTTGCCTCAACTGCAGATAGCATGCTGTGCAAAGTGGACACATAGGATGCAGGGAAATTGACTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR TCA 72 bp | ACAGGTCATAAAACAGGACTCGGCCTCCTTATGCATTaGGGTTTATTCTTGGTAAACATGAGACACTGCACT | + |
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Preference number: 3 (lower is better) Translates to: TGHKTGLGLLMH*GLFLVNMRHCT Trigger: AGTGCAGTGTCTCATGTTTACCAAGAATAAACCTCAATGCATAAGGAGGCCGAGTCCTGTTTTATGACCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR TCA 72 bp | TTCATGAGACTTTGGAACCTGTCATTGAGGGAAACCTaGACCCATGTTTCTGGGTCATGGTCATTCATATTT | + |
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Preference number: 3 (lower is better) Translates to: FMRLWNLSLRET*THVSGSWSFIF Trigger: AAATATGAATGACCATGACCCAGAAACATGGGTTCAGGTTTCCCTCAATGACAGGTTCCAAAGTCTCATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR-3UTR CAA 90 bp | TCATGTTATTTAAAGTACAATGGGGTTTCTGCCAGGACCATACCTGTCTCATTGCGGCCTCCTTATGCATaGAGGTTTATTCTTGGTAAA | + |
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Preference number: 3 (lower is better) Translates to: SCYLKYNGVSARTIPVSLRPPYA*RFILGK Trigger: TTTACCAAGAATAAACCTCAATGCATAAGGAGGCCG...CAATGAGACAGGTATGGTCCTGGCAGAAACCCCATTGTACTTTAAATAACATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR-3UTR CAA 90 bp | AGACAAAAACGAACCAGTCAATTTCCCTGCATCCTATGTGTCCACTTTGCACAGGACTACAAACATACATaGAACGAACAAAAATCCCTC | + |
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Preference number: 3 (lower is better) Translates to: RQKRTSQFPCILCVHFAQDYKHT*NEQKSL Trigger: GAGGGATTTTTGTTCGTTCAATGTATGTTTGTAGTC...CTGTGCAAAGTGGACACATAGGATGCAGGGAAATTGACTGGTTCGTTTTTGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCAAACCAAAGTTAATCAAAGGAGACAGGGAAGAACACTTAACATTCGTCAAACTGATCTCTTAAATTaGCTTCCTGTTGTCTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: FQTKVNQRRQGRTLNIRQTDLLN*LPVVWG Trigger: CCCCCAGACAACAGGAAGCAAATTTAAGAGATCAGT...TTGACGAATGTTAAGTGTTCTTCCCTGTCTCCTTTGATTAACTTTGGTTTGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCAAACCAAAGTTAATCAAAGGAGACAGGGAAGAACACTTAACATTCGTCAAAAACTTTTGTCCTGGTaGCTAGCTTGCCACATAGGA | + |
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Preference number: 3 (lower is better) Translates to: FQTKVNQRRQGRTLNIRQKLLSW*LACHIG Trigger: TCCTATGTGGCAAGCTAGCAACCAGGACAAAAGTTT...TTGACGAATGTTAAGTGTTCTTCCCTGTCTCCTTTGATTAACTTTGGTTTGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR TCA 72 bp | TTCCTCATGTCCTTAAATAGAAGCTGTGTTAGGTTTTaGGGGATATATTTATATGCAAATACAGCTACACTG | + |
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Preference number: 3 (lower is better) Translates to: FLMSLNRSCVRF*GIYLYANTATL Trigger: CAGTGTAGCTGTATTTGCATATAAATATATCCCTCAAAACCTAACACAGCTTCTATTTAAGGACATGAGGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| CDS-3UTR TCA 90 bp | ATTTCCCTGCATCCTATGTGTCCACTTTGCACAGCATGCTATCTGCAGTTGAGGCACCAGGGTGAAATCTaGCTGTCCAGTAGAGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: ISLHPMCPLCTACYLQLRHQGEI*LSSRVV Trigger: AACAACTCTACTGGACAGTCAGATTTCACCCTGGTG...CCTCAACTGCAGATAGCATGCTGTGCAAAGTGGACACATAGGATGCAGGGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| CDS-3UTR CCA 90 bp | TGGTTAGTCTTAAGAAAGCTAGCTGTAACATGTATTGTCCAGGTCACCACAGGTCCGGGACCCACAGAATaGGAAAGTCATGGTGACAGG | + |
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Preference number: 4 (lower is better) Translates to: WLVLRKLAVTCIVQVTTGPGPTE*ESHGDR Trigger: CCTGTCACCATGACTTTCCCATTCTGTGGGTCCCGG...ACCTGTGGTGACCTGGACAATACATGTTACAGCTAGCTTTCTTAAGACTAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| CDS-3UTR CCA 90 bp | CAGCATGAGTCCCATATCAACAGATGTGTAGAGACAAGGAAAAGAAAGATGCATCCGGGACCCACAGAATaGGAAAGTCATGGTGACAGG | + |
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Preference number: 4 (lower is better) Translates to: QHESHINRCVETRKRKMHPGPTE*ESHGDR Trigger: CCTGTCACCATGACTTTCCCATTCTGTGGGTCCCGG...ATGCATCTTTCTTTTCCTTGTCTCTACACATCTGTTGATATGGGACTCATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108822.8 ENSMUST00000108823.3 ENSMUST00000219448.2 |
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| CDS-3UTR CCA 90 bp | GTCCCATATCAACAGATGTGTAGAGACAAGGAAAAGAAAGATGCATTCCTAATTTCCTTCTCAGGGGTGTaGAGAGAGGCAGGGAGCATG | + |
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Preference number: 4 (lower is better) Translates to: VPYQQMCRDKEKKDAFLISFSGV*REAGSM Trigger: CATGCTCCCTGCCTCTCTCCACACCCCTGAGAAGGA...AATTAGGAATGCATCTTTCTTTTCCTTGTCTCTACACATCTGTTGATATGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108822.8 ENSMUST00000108823.3 ENSMUST00000219448.2 |
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| 3UTR CAA 72 bp | CACTTACTCCAGGCTGTCCACAGTGTCCTTAATTCATaGCTCACTGTAGTTTCTGTCAGTATCCCTGTGACA | + |
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Preference number: 4 (lower is better) Translates to: HLLQAVHSVLNS*LTVVSVSIPVT Trigger: TGTCACAGGGATACTGACAGAAACTACAGTGAGCAATGAATTAAGGACACTGTGGACAGCCTGGAGTAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR CAA 72 bp | ACAGCATGCTATCTGCAGTTGAGGCAAGAAAAACTTTaGTCCTGGTTGCTAGCTTGCCACATAGGAGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: TACYLQLRQEKL*SWLLACHIGAK Trigger: TTTGGCTCCTATGTGGCAAGCTAGCAACCAGGACAAAAGTTTTTCTTGCCTCAACTGCAGATAGCATGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| 3UTR CAA 72 bp | CCTATGTGTCCACTTTGCACAGCATGCTATCTGCAGTaGAGGCAAGAAAAACTTTTGTCCTGGTTGCTAGCT | + |
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Preference number: 4 (lower is better) Translates to: PMCPLCTACYLQ*RQEKLLSWLLA Trigger: AGCTAGCAACCAGGACAAAAGTTTTTCTTGCCTCAACTGCAGATAGCATGCTGTGCAAAGTGGACACATAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| CDS-3UTR TCA 90 bp | CATGAGTCCCATATCAACAGATGTGTAGAGACAAGGAAAAGAAAGATGCATTCCGGAAAACCACAAATATaGCCACAGCAAGCAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: HESHINRCVETRKRKMHSGKPQI*PQQAGQ Trigger: CTGCCCTGCTTGCTGTGGTCATATTTGTGGTTTTCC...GGAATGCATCTTTCTTTTCCTTGTCTCTACACATCTGTTGATATGGGACTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108822.8 ENSMUST00000108823.3 ENSMUST00000219448.2 |
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| CDS-3UTR TCA 90 bp | CATGAGTCCCATATCAACAGATGTGTAGAGACAAGGAAAAGAAAGATGCATTCCTGTTCATCCAGGTGGTaGGGTCCATGTTTGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: HESHINRCVETRKRKMHSCSSRW*GPCLSP Trigger: AGGAGACAAACATGGACCTCACCACCTGGATGAACA...GGAATGCATCTTTCTTTTCCTTGTCTCTACACATCTGTTGATATGGGACTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108822.8 |
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| CDS-3UTR CCA 90 bp | CCATATCAACAGATGTGTAGAGACAAGGAAAAGAAAGATGCATTCCTAATTGTTTCCTTCTCAGGGGTGTaGAGAGAGGCAGGGAGCATG | + |
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Preference number: 4 (lower is better) Translates to: PYQQMCRDKEKKDAFLIVSFSGV*REAGSM Trigger: CATGCTCCCTGCCTCTCTCCACACCCCTGAGAAGGA...AACAATTAGGAATGCATCTTTCTTTTCCTTGTCTCTACACATCTGTTGATATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108822.8 ENSMUST00000108823.3 ENSMUST00000219448.2 |
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| 3UTR CAA 72 bp | GTGACTTGTTTGTGCTTTGTAGCACTTCATGAGACTTaGGAACCTGTCATTGAGGGAAACCTGAACCCATGT | + |
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Preference number: 4 (lower is better) Translates to: VTCLCFVALHET*EPVIEGNLNPC Trigger: ACATGGGTTCAGGTTTCCCTCAATGACAGGTTCCAAAGTCTCATGAAGTGCTACAAAGCACAAACAAGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| CDS-3UTR TCA 90 bp | CATGAGTCCCATATCAACAGATGTGTAGAGACAAGGAAAAGAAAGATGCATTCCCACCAGGGTGAAATCTaGCTGTCCAGTAGAGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: HESHINRCVETRKRKMHSHQGEI*LSSRVV Trigger: AACAACTCTACTGGACAGTCAGATTTCACCCTGGTG...GGAATGCATCTTTCTTTTCCTTGTCTCTACACATCTGTTGATATGGGACTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108822.8 ENSMUST00000108823.3 ENSMUST00000219448.2 |
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| CDS-3UTR CCA 90 bp | CCATATCAACAGATGTGTAGAGACAAGGAAAAGAAAGATGCATTCCTAATTGTTCCGGGACCCACAGAATaGGAAAGTCATGGTGACAGG | + |
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Preference number: 4 (lower is better) Translates to: PYQQMCRDKEKKDAFLIVPGPTE*ESHGDR Trigger: CCTGTCACCATGACTTTCCCATTCTGTGGGTCCCGG...AACAATTAGGAATGCATCTTTCTTTTCCTTGTCTCTACACATCTGTTGATATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108822.8 ENSMUST00000108823.3 ENSMUST00000219448.2 |
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| CDS-3UTR TCA 90 bp | GTCCCATATCAACAGATGTGTAGAGACAAGGAAAAGAAAGATGCATTCCTAATTGGAAAACCACAAATATaGCCACAGCAAGCAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VPYQQMCRDKEKKDAFLIGKPQI*PQQAGQ Trigger: CTGCCCTGCTTGCTGTGGTCATATTTGTGGTTTTCC...AATTAGGAATGCATCTTTCTTTTCCTTGTCTCTACACATCTGTTGATATGGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108822.8 ENSMUST00000108823.3 ENSMUST00000219448.2 |
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| CDS-3UTR TCA 90 bp | GTCCCATATCAACAGATGTGTAGAGACAAGGAAAAGAAAGATGCATTCCTAATTCACCAGGGTGAAATCTaGCTGTCCAGTAGAGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: VPYQQMCRDKEKKDAFLIHQGEI*LSSRVV Trigger: AACAACTCTACTGGACAGTCAGATTTCACCCTGGTG...AATTAGGAATGCATCTTTCTTTTCCTTGTCTCTACACATCTGTTGATATGGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108822.8 ENSMUST00000108823.3 ENSMUST00000219448.2 |
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| CDS-3UTR CAA 90 bp | CAGCATGAGTCCCATATCAACAGATGTGTAGAGACAAGGAAAAGAAAGATGCATGACTGTCCAGTAGAGTaGTTCATCCAGGTGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: QHESHINRCVETRKRKMHDCPVE*FIQVVR Trigger: CCTCACCACCTGGATGAACAACTCTACTGGACAGTC...ATGCATCTTTCTTTTCCTTGTCTCTACACATCTGTTGATATGGGACTCATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108822.8 ENSMUST00000108823.3 ENSMUST00000219448.2 |
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| CDS-3UTR CAA 90 bp | CATGAGTCCCATATCAACAGATGTGTAGAGACAAGGAAAAGAAAGATGCATTCCGACTGTCCAGTAGAGTaGTTCATCCAGGTGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: HESHINRCVETRKRKMHSDCPVE*FIQVVR Trigger: CCTCACCACCTGGATGAACAACTCTACTGGACAGTC...GGAATGCATCTTTCTTTTCCTTGTCTCTACACATCTGTTGATATGGGACTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108822.8 ENSMUST00000108823.3 ENSMUST00000219448.2 |
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| CDS-3UTR CAA 90 bp | TCATGTTATTTAAAGTACAATGGGGTTTCTGCCAGGACCATACCTGTCTCATTGGACTGTCCAGTAGAGTaGTTCATCCAGGTGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: SCYLKYNGVSARTIPVSLDCPVE*FIQVVR Trigger: CCTCACCACCTGGATGAACAACTCTACTGGACAGTC...CAATGAGACAGGTATGGTCCTGGCAGAAACCCCATTGTACTTTAAATAACATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219448.2 |
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| CDS CAA 72 bp | AGTCCCACCAGGGTGAAATCTGACTGTCCAGTAGAGTaGTTCATCCAGGTGGTGAGGTCCATGTTTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SPTRVKSDCPVE*FIQVVRSMFVS Trigger: GGAGACAAACATGGACCTCACCACCTGGATGAACAACTCTACTGGACAGTCAGATTTCACCCTGGTGGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108822.8 |
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