Pregenerated sensors for OLFR328 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057654Ensembl transcript IDs: ENSMUST00000073933.2, ENSMUST00000108824.3, ENSMUST00000215717.2, ENSMUST00000216725.2
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AACAACCTTTCTTTCAACTCTCTATATTTTATCCGTTTCACACATCATGTGCACAAAAAGGGATGTCTATaGAATGGGACATGGTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: NNLSFNSLYFIRFTHHVHKKGCL*NGTWWV Trigger: GACCCACCATGTCCCATTTCATAGACATCCCTTTTT...GTGCACATGATGTGTGAAACGGATAAAATATAGAGAGTTGAAAGAAAGGTTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215717.2 ENSMUST00000216725.2 |
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| CDS-3UTR TCA 90 bp | ACCTTTCTTTCAACTCTCTATATTTTATCCGTTTCACACATCATGTGCACTATGAGCAGGAGAGCTTTGTaGCAGCAGGGACCTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: TFLSTLYILSVSHIMCTMSRRAL*QQGPHR Trigger: TCTGTGAGGTCCCTGCTGTCACAAAGCTCTCCTGCT...CATAGTGCACATGATGTGTGAAACGGATAAAATATAGAGAGTTGAAAGAAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215717.2 ENSMUST00000216725.2 |
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| CDS-3UTR CCA 90 bp | AATAGTTCTTCAAAAAGGGATGTCTATGAAATGGGACATGGTGGGTCAAGAATAATGGGTGTGTGGAGGTaGGTGTCAGAGAGTATCAGC | + |
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Preference number: 4 (lower is better) Translates to: NSSSKRDVYEMGHGGSRIMGVWR*VSESIS Trigger: GCTGATACTCTCTGACACCCACCTCCACACACCCAT...TATTCTTGACCCACCATGTCCCATTTCATAGACATCCCTTTTTGAAGAACTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215717.2 ENSMUST00000216725.2 |
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| CDS-3UTR TCA 90 bp | AACAACCTTTCTTTCAACTCTCTATATTTTATCCGTTTCACACATCATGTGCACAAATCCTGTGGTTCATaGGGACAGGATACCGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NNLSFNSLYFIRFTHHVHKSCGS*GQDTGV Trigger: CACTCCGGTATCCTGTCCTCATGAACCACAGGATTT...GTGCACATGATGTGTGAAACGGATAAAATATAGAGAGTTGAAAGAAAGGTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215717.2 ENSMUST00000216725.2 |
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| CDS-3UTR TCA 90 bp | ACCTTTCTTTCAACTCTCTATATTTTATCCGTTTCACACATCATGTGCACTATGAAATCCTGTGGTTCATaGGGACAGGATACCGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TFLSTLYILSVSHIMCTMKSCGS*GQDTGV Trigger: CACTCCGGTATCCTGTCCTCATGAACCACAGGATTT...CATAGTGCACATGATGTGTGAAACGGATAAAATATAGAGAGTTGAAAGAAAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215717.2 ENSMUST00000216725.2 |
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| CDS-3UTR TCA 90 bp | AATAGTTCTTCAAAAAGGGATGTCTATGAAATGGGACATGGTGGGTCAAGAATAGGTTCAACAGAGGGGTaGCTATGGTGTAAAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: NSSSKRDVYEMGHGGSRIGSTEG*LWCKTQ Trigger: CTGTGTTTTACACCATAGTCACCCCTCTGTTGAACC...TATTCTTGACCCACCATGTCCCATTTCATAGACATCCCTTTTTGAAGAACTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215717.2 ENSMUST00000216725.2 |
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| CDS-3UTR TCA 90 bp | AATAGTTCTTCAAAAAGGGATGTCTATGAAATGGGACATGGTGGGTCAAGAATAAGAATCCCACCAGGGTaGAATCTGAAAATTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: NSSSKRDVYEMGHGGSRIRIPPG*NLKIVQ Trigger: CTGGACAATTTTCAGATTTCACCCTGGTGGGATTCT...TATTCTTGACCCACCATGTCCCATTTCATAGACATCCCTTTTTGAAGAACTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215717.2 ENSMUST00000216725.2 |
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| CDS GCA 90 bp | AGAAGCAAAAATTCTGACCCTCCTATTGACAGGTACAGGAACATCTaGATCCCACAGGCAGCAGCTGAGATCTTGTGGCTCCCCAGGACC | + |
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Preference number: 5 (lower is better) Translates to: RSKNSDPPIDRYRNI*IPQAAAEILWLPRT Trigger: GGTCCTGGGGAGCCACAAGATCTCAGCTGCTGCCTGTGGGATGCAGATGTTCCTGTACCTGTCAATAGGAGGGTCAGAATTTTTGCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073933.2 ENSMUST00000108824.3 ENSMUST00000215717.2 ENSMUST00000216725.2 |
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| CDS-3UTR CAA 90 bp | AATAGTTCTTCAAAAAGGGATGTCTATGAAATGGGACATGGTGGGTCAAGAATAATTCTGACCCTCCTATaGACAGGTACAGGAACATCT | + |
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Preference number: 5 (lower is better) Translates to: NSSSKRDVYEMGHGGSRIILTLL*TGTGTS Trigger: AGATGTTCCTGTACCTGTCAATAGGAGGGTCAGAAT...TATTCTTGACCCACCATGTCCCATTTCATAGACATCCCTTTTTGAAGAACTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215717.2 ENSMUST00000216725.2 |
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| CDS-3UTR CAA 90 bp | AACAACCTTTCTTTCAACTCTCTATATTTTATCCGTTTCACACATCATGTGCACATTCTGACCCTCCTATaGACAGGTACAGGAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: NNLSFNSLYFIRFTHHVHILTLL*TGTGTS Trigger: AGATGTTCCTGTACCTGTCAATAGGAGGGTCAGAAT...GTGCACATGATGTGTGAAACGGATAAAATATAGAGAGTTGAAAGAAAGGTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215717.2 ENSMUST00000216725.2 |
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| CDS GCA 72 bp | AATTCTGACCCTCCTATTGACAGGTACAGGAACATCTaGATCCCACAGGCAGCAGCTGAGATCTTGTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: NSDPPIDRYRNI*IPQAAAEILWL Trigger: GAGCCACAAGATCTCAGCTGCTGCCTGTGGGATGCAGATGTTCCTGTACCTGTCAATAGGAGGGTCAGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073933.2 ENSMUST00000108824.3 ENSMUST00000215717.2 ENSMUST00000216725.2 |
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| CDS TCA 72 bp | AATATGACCACAGCAAGCAGGGCAGGGTGTTTGGATTaGCTGAAGAATCCCACCAGGGTGAAATCTGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: NMTTASRAGCLD*LKNPTRVKSEN Trigger: ATTTTCAGATTTCACCCTGGTGGGATTCTTCAGTCAATCCAAACACCCTGCCCTGCTTGCTGTGGTCATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073933.2 ENSMUST00000108824.3 ENSMUST00000215717.2 ENSMUST00000216725.2 |
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