Pregenerated sensors for OLFR325 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060765Ensembl transcript IDs: ENSMUST00000169428.5, ENSMUST00000203418.4
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CAAAGGATATTGAATAGTCCATTATTGCTCACTATGAACAAATGGGACATAACCTCATGCTATCAGGCATaGCATGTGAGCAGCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: QRILNSPLLLTMNKWDITSCYQA*HVSSLQ Trigger: CTGCAGGCTGCTCACATGTCATGCCTGATAGCATGA...GGTTATGTCCCATTTGTTCATAGTGAGCAATAATGGACTATTCAATATCCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| 3UTR-3UTR TCA 90 bp | CCAGAATACTGGCAAAGGATATTGAATAGTCCATTATTGCTCACTATGAACAAACAGAACAGAAGTCCTTaGTGGCAGACAGAAAGCATC | + |
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Preference number: 2 (lower is better) Translates to: PEYWQRILNSPLLLTMNKQNRSP*WQTESI Trigger: GATGCTTTCTGTCTGCCATCAAGGACTTCTGTTCTG...TTTGTTCATAGTGAGCAATAATGGACTATTCAATATCCTTTGCCAGTATTCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| 3UTR-3UTR GCA 90 bp | CCAGAATACTGGCAAAGGATATTGAATAGTCCATTATTGCTCACTATGAACAAACGATTTCTGATGAACTaGCCTGGTAAACTAGACGCA | + |
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Preference number: 2 (lower is better) Translates to: PEYWQRILNSPLLLTMNKRFLMN*PGKLDA Trigger: TGCGTCTAGTTTACCAGGGCAGTTCATCAGAAATCG...TTTGTTCATAGTGAGCAATAATGGACTATTCAATATCCTTTGCCAGTATTCTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| 3UTR-3UTR CCA 90 bp | ACACATAAGAAAGACAGTAATGGAACCCAAATAATCCTGTCAGTACACATAGTACATCAGCATGACACCTaGAAAAACAGATGTGTACAG | + |
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Preference number: 2 (lower is better) Translates to: THKKDSNGTQIILSVHIVHQHDT*KNRCVQ Trigger: CTGTACACATCTGTTTTTCCAGGTGTCATGCTGATG...TACTATGTGTACTGACAGGATTATTTGGGTTCCATTACTGTCTTTCTTATGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| 3UTR-3UTR CCA 90 bp | CACATAGGGAAAACCACGGACCATTTCCAAGATAAACATTTATTCCAACTTCTTCTCACTATGAACAAATaGGACATAACCCAGGAATAT | + |
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Preference number: 2 (lower is better) Translates to: HIGKTTDHFQDKHLFQLLLTMNK*DITQEY Trigger: ATATTCCTGGGTTATGTCCCATTTGTTCATAGTGAG...AAGAAGTTGGAATAAATGTTTATCTTGGAAATGGTCCGTGGTTTTCCCTATGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| 3UTR TCA 72 bp | CGCAGGAAGTCCACATTGCTACAGAACAGAAGTCCTTaGTGGCAGACAGAAAGCATCATGCTATCAGGCATG | + |
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Preference number: 3 (lower is better) Translates to: RRKSTLLQNRSP*WQTESIMLSGM Trigger: CATGCCTGATAGCATGATGCTTTCTGTCTGCCATCAAGGACTTCTGTTCTGTAGCAATGTGGACTTCCTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| 3UTR GCA 72 bp | AACTGCCCTGGTAAACTAGACGCAGGAAGTCCACATTaGTACAGAACAGAAGTCCTTGATGGCAGACAGAAA | + |
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Preference number: 3 (lower is better) Translates to: NCPGKLDAGSPH*YRTEVLDGRQK Trigger: TTTCTGTCTGCCATCAAGGACTTCTGTTCTGTAGCAATGTGGACTTCCTGCGTCTAGTTTACCAGGGCAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| 3UTR-3UTR CAA 90 bp | CACATAGGGAAAACCACGGACCATTTCCAAGATAAACATTTATTCCAACTTCTTACAGAACAGAAGTCCTaGATGGCAGACAGAAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: HIGKTTDHFQDKHLFQLLTEQKS*MADRKH Trigger: ATGCTTTCTGTCTGCCATCAAGGACTTCTGTTCTGT...AAGAAGTTGGAATAAATGTTTATCTTGGAAATGGTCCGTGGTTTTCCCTATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| 3UTR TCA 72 bp | CAGCAAAATGGTTTAATGCTGAATTCTAGTGTTACATaGACAATAACAAATCTCCCACTGTCCCAGAACATT | + |
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Preference number: 3 (lower is better) Translates to: QQNGLMLNSSVT*TITNLPLSQNI Trigger: AATGTTCTGGGACAGTGGGAGATTTGTTATTGTTCATGTAACACTAGAATTCAGCATTAAACCATTTTGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| CDS-3UTR CCA 90 bp | TTACTGAGTCAGCATCGATTTCTGATGAACTGCCCTGGTAAACTAGACGCAGGAGACAGGATACCGGAGTaGATGACAGATGGCTACATA | + |
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Preference number: 4 (lower is better) Translates to: LLSQHRFLMNCPGKLDAGDRIPE*MTDGYI Trigger: TATGTAGCCATCTGTCATCCACTCCGGTATCCTGTC...TCCTGCGTCTAGTTTACCAGGGCAGTTCATCAGAAATCGATGCTGACTCAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| 3UTR CAA 72 bp | ACGCAGGAAGTCCACATTGCTACAGAACAGAAGTCCTaGATGGCAGACAGAAAGCATCATGCTATCAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: TQEVHIATEQKS*MADRKHHAIRH Trigger: ATGCCTGATAGCATGATGCTTTCTGTCTGCCATCAAGGACTTCTGTTCTGTAGCAATGTGGACTTCCTGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| CDS-3UTR TCA 90 bp | TTACTGAGTCAGCATCGATTTCTGATGAACTGCCCTGGTAAACTAGACGCAGGACACCAGGGTGAAATCTaGCTGTGTAGTGTAGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: LLSQHRFLMNCPGKLDAGHQGEI*LCSVVV Trigger: AACAACTACACTACACAGTCAGATTTCACCCTGGTG...TCCTGCGTCTAGTTTACCAGGGCAGTTCATCAGAAATCGATGCTGACTCAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| CDS-3UTR CCA 90 bp | ACACATAAGAAAGACAGTAATGGAACCCAAATAATCCTGTCAGTACACATAGTATCCTTCTCAGGGCTGTaGAGGGAGGCAGGGAAAATG | + |
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Preference number: 4 (lower is better) Translates to: THKKDSNGTQIILSVHIVSFSGL*REAGKM Trigger: CATTTTCCCTGCCTCCCTCCACAGCCCTGAGAAGGA...TACTATGTGTACTGACAGGATTATTTGGGTTCCATTACTGTCTTTCTTATGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| CDS-3UTR TCA 90 bp | CCAGAATACTGGCAAAGGATATTGAATAGTCCATTATTGCTCACTATGAACAAAATAGAGCCAGGTGTCTaGGCAGGAGAGCTTTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: PEYWQRILNSPLLLTMNKIEPGV*AGELCH Trigger: GTGACAAAGCTCTCCTGCTCAGACACCTGGCTCTAT...TTTGTTCATAGTGAGCAATAATGGACTATTCAATATCCTTTGCCAGTATTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| CDS-3UTR TCA 90 bp | ATATTGAATAGTCCATTATTGCTCACTATGAACAAATGGGACATAACCCAGGAAACAGGGTGTTTGGATTaGCTGAAGAATCCCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: ILNSPLLLTMNKWDITQETGCLD*LKNPTR Trigger: CCTGGTGGGATTCTTCAGTCAATCCAAACACCCTGT...TTCCTGGGTTATGTCCCATTTGTTCATAGTGAGCAATAATGGACTATTCAATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| CDS-3UTR TCA 90 bp | CACATAGGGAAAACCACGGACCATTTCCAAGATAAACATTTATTCCAACTTCTTGGAAAACCACAAATATaGCCACAGCAAGCAGGACAG | + |
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Preference number: 4 (lower is better) Translates to: HIGKTTDHFQDKHLFQLLGKPQI*PQQAGQ Trigger: CTGTCCTGCTTGCTGTGGTCATATTTGTGGTTTTCC...AAGAAGTTGGAATAAATGTTTATCTTGGAAATGGTCCGTGGTTTTCCCTATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| CDS-3UTR TCA 90 bp | ACACATAAGAAAGACAGTAATGGAACCCAAATAATCCTGTCAGTACACATAGTAGGTTCAACAGAGGGGTaGGTATGGTGTAAAACACAG | + |
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Preference number: 4 (lower is better) Translates to: THKKDSNGTQIILSVHIVGSTEG*VWCKTQ Trigger: CTGTGTTTTACACCATACTCACCCCTCTGTTGAACC...TACTATGTGTACTGACAGGATTATTTGGGTTCCATTACTGTCTTTCTTATGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| CDS-3UTR TCA 90 bp | CACATAGGGAAAACCACGGACCATTTCCAAGATAAACATTTATTCCAACTTCTTTCCTTTAAAGATTCTTaGAAGAAGGGTTTCACACCC | + |
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Preference number: 4 (lower is better) Translates to: HIGKTTDHFQDKHLFQLLSFKDS*KKGFTP Trigger: GGGTGTGAAACCCTTCTTTCAAGAATCTTTAAAGGA...AAGAAGTTGGAATAAATGTTTATCTTGGAAATGGTCCGTGGTTTTCCCTATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| CDS-3UTR CAA 90 bp | AGCATCATGCTATCAGGCATGACATGTGAGCAGCCTGCAGGTACCATCAGCATGGACAGGGTGTTTGGATaGACTGAAGAATCCCACCAG | + |
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Preference number: 5 (lower is better) Translates to: SIMLSGMTCEQPAGTISMDRVFG*TEESHQ Trigger: CTGGTGGGATTCTTCAGTCAATCCAAACACCCTGTC...CATGCTGATGGTACCTGCAGGCTGCTCACATGTCATGCCTGATAGCATGATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203418.4 |
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| CDS TCA 72 bp | ATAAAGACATCAGCAGGAGGCACACCCTGTGGTTCATaGGGACAGGATACCGGAGTGGATGACAGATGGCTA | + |
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Preference number: 6 (lower is better) Translates to: IKTSAGGTPCGS*GQDTGVDDRWL Trigger: TAGCCATCTGTCATCCACTCCGGTATCCTGTCCTCATGAACCACAGGGTGTGCCTCCTGCTGATGTCTTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169428.5 ENSMUST00000203418.4 |
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| CDS TCA 72 bp | AATATGACCACAGCAAGCAGGACAGGGTGTTTGGATTaGCTGAAGAATCCCACCAGGGTGAAATCTGACTGT | + |
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Preference number: 6 (lower is better) Translates to: NMTTASRTGCLD*LKNPTRVKSDC Trigger: ACAGTCAGATTTCACCCTGGTGGGATTCTTCAGTCAATCCAAACACCCTGTCCTGCTTGCTGTGGTCATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169428.5 ENSMUST00000203418.4 |
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| CDS TCA 72 bp | TTTGGATTGACTGAAGAATCCCACCAGGGTGAAATCTaGCTGTGTAGTGTAGTTGTTCATCCAGGTGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: FGLTEESHQGEI*LCSVVVHPGGE Trigger: CTCACCACCTGGATGAACAACTACACTACACAGTCAGATTTCACCCTGGTGGGATTCTTCAGTCAATCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169428.5 ENSMUST00000203418.4 |
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