Pregenerated sensors for OLFR324 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056564Ensembl transcript IDs: ENSMUST00000054683.8, ENSMUST00000214990.2, ENSMUST00000216965.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACCATCACTGGGAAGAGAGGCCCCTAGGTCTTGCAAACTTTATATaGCCCAGTACAGGGGAACGCCAGGGCCAAGAAGTGGGAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: NHHWEERPLGLANFI*PSTGERQGQEVGVG Trigger: ACCCACTCCCACTTCTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGACCTAGGGGCCTCTCTTCCCAGTGATGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR TCA 90 bp | CTGGACCTGAGCCACTGTCCCCTGCTCCTGACATGCTTCCTGCTATaGCCAGGTTTGGAATTTGGCTTCAAGCTGAACTGGGCAGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: LDLSHCPLLLTCFLL*PGLEFGFKLNWAES Trigger: AGACTCTGCCCAGTTCAGCTTGAAGCCAAATTCCAAACCTGGTCATAGCAGGAAGCATGTCAGGAGCAGGGGACAGTGGCTCAGGTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR CCA 90 bp | TCAAATCTGACTCCGGCAGCTCTAGCAGCAGCCCCCTCTCAGCCCTaGTCCGACCCATCATCTTATGAACATAGACTCTGCCAACTTCTG | + |
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Preference number: 1 (lower is better) Translates to: SNLTPAALAAAPSQP*SDPSSYEHRLCQLL Trigger: CAGAAGTTGGCAGAGTCTATGTTCATAAGATGATGGGTCGGACCAGGGCTGAGAGGGGGCTGCTGCTAGAGCTGCCGGAGTCAGATTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR TCA 90 bp | CTCCACTCTTTCCAGCTGTGCACAGCCTCATACCAACCTATCATCTaGTACCTGTTGTGTGTCAGGAGCAGGGGACTCCACAAATGCCCC | + |
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Preference number: 1 (lower is better) Translates to: LHSFQLCTASYQPII*YLLCVRSRGLHKCP Trigger: GGGGCATTTGTGGAGTCCCCTGCTCCTGACACACAACAGGTATCAGATGATAGGTTGGTATGAGGCTGTGCACAGCTGGAAAGAGTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR GCA 90 bp | GAAAACCAAAGTCCATCCAGAAGGGAGATGCTGCCAGTTCGCCACTaGAGACACACAGTAGTCTCACTGGAGACACTGAGTTCCTTAGGC | + |
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Preference number: 1 (lower is better) Translates to: ENQSPSRREMLPVRH*RHTVVSLETLSSLG Trigger: GCCTAAGGAACTCAGTGTCTCCAGTGAGACTACTGTGTGTCTGCAGTGGCGAACTGGCAGCATCTCCCTTCTGGATGGACTTTGGTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR CCA 90 bp | TCCCCTGCTCCTGACATGCTTCCTGCTATGACCAGGTTTGGAATTTaGCTTCAAGCTGAACTGGGCAGAGTCTCCTCAAATCTGACTCCG | + |
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Preference number: 1 (lower is better) Translates to: SPAPDMLPAMTRFGI*LQAELGRVSSNLTP Trigger: CGGAGTCAGATTTGAGGAGACTCTGCCCAGTTCAGCTTGAAGCCAAATTCCAAACCTGGTCATAGCAGGAAGCATGTCAGGAGCAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR TCA 90 bp | AGACTCTCATACACACAAAGCAAGGCTCTTGGGTATTTTAGTCCTTaGTCTCTTCCCAGAAAACCAAAGTCCATCCAGAAGGGAGATGCT | + |
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Preference number: 1 (lower is better) Translates to: RLSYTQSKALGYFSP*SLPRKPKSIQKGDA Trigger: AGCATCTCCCTTCTGGATGGACTTTGGTTTTCTGGGAAGAGATCAAGGACTAAAATACCCAAGAGCCTTGCTTTGTGTGTATGAGAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR GCA 90 bp | GAAAGAATCACATGTGCTGAGCTCAGGCTGTGCCCTATTCTAAATTaGTTCACATTGTGTAAAACAGTGGTCTTTCCAGCTGTGCATTGC | + |
|
Preference number: 1 (lower is better) Translates to: ERITCAELRLCPILN*FTLCKTVVFPAVHC Trigger: GCAATGCACAGCTGGAAAGACCACTGTTTTACACAATGTGAAGCAATTTAGAATAGGGCACAGCCTGAGCTCAGCACATGTGATTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR GCA 90 bp | CCTGAAGAACTCCACGAAAGAATCACATGTGCTGAGCTCAGGCTGTaGCCTATTCTAAATTGCTTCACATTGTGTAAAACAGTGGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: PEELHERITCAELRL*PILNCFTLCKTVVF Trigger: AAAGACCACTGTTTTACACAATGTGAAGCAATTTAGAATAGGGCACAGCCTGAGCTCAGCACATGTGATTCTTTCGTGGAGTTCTTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCTGTTTGTCCACCTGGACCTGAGCCACTGTCCCCTGCTCCTGACATGCTTCTCCTGGGGGTGCTATaGCTGCTCAGGGGAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: PPVCPPGPEPLSPAPDMLLLGVL*LLRGGR Trigger: TCTGCCTCCCCTGAGCAGCCATAGCACCCCCAGGAG...AAGCATGTCAGGAGCAGGGGACAGTGGCTCAGGTCCAGGTGGACAAACAGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR CCA 90 bp | AACCAAAGTCCATCCAGAAGGGAGATGCTGCCAGTTCGCCACTGCAGACACACACTCCTGGGGGTGCTATaGCTGCTCAGGGGAGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: NQSPSRREMLPVRHCRHTLLGVL*LLRGGR Trigger: TCTGCCTCCCCTGAGCAGCCATAGCACCCCCAGGAG...TGTGTGTCTGCAGTGGCGAACTGGCAGCATCTCCCTTCTGGATGGACTTTGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTTTCCAGCTGTGCATTGCCCTAGAAGACTCCACTCTTTCCAGCTGTGCACATTGTCCACCTGGACCTaGGCCACTGTCCCCTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: VFPAVHCPRRLHSFQLCTLSTWT*ATVPCS Trigger: GGAGCAGGGGACAGTGGCTCAGGTCCAGGTGGACAA...TGTGCACAGCTGGAAAGAGTGGAGTCTTCTAGGGCAATGCACAGCTGGAAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR GCA 90 bp | CCACCTGTTTGTCCACCTGGACCTGAGCCACTGTCCCCTGCTCCTGACATGCTTCTGCCAGTTCGCCACTaGAGACACACAGTAGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: PPVCPPGPEPLSPAPDMLLPVRH*RHTVVS Trigger: TGAGACTACTGTGTGTCTGCAGTGGCGAACTGGCAG...AAGCATGTCAGGAGCAGGGGACAGTGGCTCAGGTCCAGGTGGACAAACAGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR CAA 90 bp | AAAGCCGAGGCAACTCCAAGTGTGGAGACACACACACATCAGCAGTaGGTCTTCAAGGTCAGCCTGAGCTTCAAGGGCGGGCCAGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: KAEATPSVETHTHQQ*VFKVSLSFKGGPVS Trigger: AGACACTGGCCCGCCCTTGAAGCTCAGGCTGACCTTGAAGACCAACTGCTGATGTGTGTGTGTCTCCACACTTGGAGTTGCCTCGGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGCAGAGTCTCCTCAAATCTGACTCCGGCAGCTCTAGCAGCAGCCCCCTCTCTGTCTCCAAGTTCTaGAAAGTGCCTCTGTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: TGQSLLKSDSGSSSSSPLSVSKF*KVPLSH Trigger: GTGAGACAGAGGCACTTTCCAGAACTTGGAGACAGA...GAGGGGGCTGCTGCTAGAGCTGCCGGAGTCAGATTTGAGGAGACTCTGCCCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTTTCCAGCTGTGCATTGCCCTAGAAGACTCCACTCTTTCCAGCTGTGCACAGCCAAGAAGTGGGAGTaGGTAGGTAGGGCAGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: VFPAVHCPRRLHSFQLCTAKKWE*VGRAAG Trigger: CCCTGCTGCCCTACCTACCCACTCCCACTTCTTGGC...TGTGCACAGCTGGAAAGAGTGGAGTCTTCTAGGGCAATGCACAGCTGGAAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR CCA 90 bp | CACAAATGCCCCTGGATCTTCCTGTTGGTTGGGTGCCTGCTATTGATGAGACTGGCCAGGGCCAAGAAGTaGGAGTGGGTAGGTAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: HKCPWIFLLVGCLLLMRLARAKK*EWVGRA Trigger: TGCCCTACCTACCCACTCCCACTTCTTGGCCCTGGC...CAGTCTCATCAATAGCAGGCACCCAACCAACAGGAAGATCCAGGGGCATTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCTGTTTGTCCACCTGGACCTGAGCCACTGTCCCCTGCTCCTGACATGCTTGGCTTCAAGCTGAACTaGGCAGAGTCTCCTCAAATC | + |
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Preference number: 2 (lower is better) Translates to: PPVCPPGPEPLSPAPDMLGFKLN*AESPQI Trigger: GATTTGAGGAGACTCTGCCCAGTTCAGCTTGAAGCC...AAGCATGTCAGGAGCAGGGGACAGTGGCTCAGGTCCAGGTGGACAAACAGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR CAA 90 bp | CTCCACAAATGCCCCTGGATCTTCCTGTTGGTTGGGTGCCTGCTATaGATGAGACTGCTTGACCTGTCTGCCAGCCCACCTGTTTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: LHKCPWIFLLVGCLL*MRLLDLSASPPVCP Trigger: TGGACAAACAGGTGGGCTGGCAGACAGGTCAAGCAGTCTCATCAATAGCAGGCACCCAACCAACAGGAAGATCCAGGGGCATTTGTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGGGCAGAGTCTCCTCAAATCTGACTCCGGCAGCTCTAGCAGCAGCCCCCTCGTCTCACTCCACTGTTaGCTTCTGTCTCTGTTTTTC | + |
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Preference number: 2 (lower is better) Translates to: TGQSLLKSDSGSSSSSPLVSLHC*LLSLFF Trigger: GAAAAACAGAGACAGAAGGCAACAGTGGAGTGAGAC...GAGGGGGCTGCTGCTAGAGCTGCCGGAGTCAGATTTGAGGAGACTCTGCCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGCAGAGTCTCCTCAAATCTGACTCCGGCAGCTCTAGCAGCAGCCCCCTCGCATGCATATTCTTTTaGGACAGGACCTTACCACAT | + |
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Preference number: 2 (lower is better) Translates to: TGQSLLKSDSGSSSSSPLACIFF*DRTLPH Trigger: ATGTGGTAAGGTCCTGTCTCAAAAGAATATGCATGC...GAGGGGGCTGCTGCTAGAGCTGCCGGAGTCAGATTTGAGGAGACTCTGCCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAAACAGTGGTCTTTCCAGCTGTGCATTGCCCTAGAAGACTCCACTCTTTCCGCCAAGAAGTGGGAGTaGGTAGGTAGGGCAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: VKQWSFQLCIALEDSTLSAKKWE*VGRAAG Trigger: CCCTGCTGCCCTACCTACCCACTCCCACTTCTTGGC...GGAAAGAGTGGAGTCTTCTAGGGCAATGCACAGCTGGAAAGACCACTGTTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAAACAGTGGTCTTTCCAGCTGTGCATTGCCCTAGAAGACTCCACTCTTTCCGCCAGGGCCAAGAAGTaGGAGTGGGTAGGTAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: VKQWSFQLCIALEDSTLSARAKK*EWVGRA Trigger: TGCCCTACCTACCCACTCCCACTTCTTGGCCCTGGC...GGAAAGAGTGGAGTCTTCTAGGGCAATGCACAGCTGGAAAGACCACTGTTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR TCA 90 bp | CCACCTGTTTGTCCACCTGGACCTGAGCCACTGTCCCCTGCTCCTGACATGCTTGCTTTGCCTTTATTTTaGGTTACTCAACGAAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: PPVCPPGPEPLSPAPDMLALPLF*VTQRSA Trigger: GGCACTTCGTTGAGTAACTCAAAATAAAGGCAAAGC...AAGCATGTCAGGAGCAGGGGACAGTGGCTCAGGTCCAGGTGGACAAACAGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR TCA 90 bp | GTAAAACAGTGGTCTTTCCAGCTGTGCATTGCCCTAGAAGACTCCACTCTTTCCGCAGAAGGCAGAAAGTaGCAGGGGTCTCCCGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: VKQWSFQLCIALEDSTLSAEGRK*QGSPGE Trigger: TTCACCGGGAGACCCCTGTCACTTTCTGCCTTCTGC...GGAAAGAGTGGAGTCTTCTAGGGCAATGCACAGCTGGAAAGACCACTGTTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAAACAGTGGTCTTTCCAGCTGTGCATTGCCCTAGAAGACTCCACTCTTTCCGCCCCCTCTCAGCCCTaGTCCGACCCATCATCTTAT | + |
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Preference number: 2 (lower is better) Translates to: VKQWSFQLCIALEDSTLSAPSQP*SDPSSY Trigger: ATAAGATGATGGGTCGGACCAGGGCTGAGAGGGGGC...GGAAAGAGTGGAGTCTTCTAGGGCAATGCACAGCTGGAAAGACCACTGTTTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGCAGGGGACTCCACAAATGCCCCTGGATCTTCCTGTTGGTTGGGTGCCTGCCATAGAGCTGAGCTTTaGCTTTATTTTGAGTTACTC | + |
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Preference number: 2 (lower is better) Translates to: GAGDSTNAPGSSCWLGACHRAEL*LYFELL Trigger: GAGTAACTCAAAATAAAGGCAAAGCTCAGCTCTATG...GCAGGCACCCAACCAACAGGAAGATCCAGGGGCATTTGTGGAGTCCCCTGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR TCA 90 bp | CACAAATGCCCCTGGATCTTCCTGTTGGTTGGGTGCCTGCTATTGATGAGACTGGAGAAGTTGAAATTGTaGCCAGCAAGTTTGAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: HKCPWIFLLVGCLLLMRLEKLKL*PASLSL Trigger: GAGACTCAAACTTGCTGGTCACAATTTCAACTTCTC...CAGTCTCATCAATAGCAGGCACCCAACCAACAGGAAGATCCAGGGGCATTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR TCA 90 bp | GTAAAACAGTGGTCTTTCCAGCTGTGCATTGCCCTAGAAGACTCCACTCTTTCCGGGTATTTTAGTCCTTaGTCTCTTCCCAGAAAACCA | + |
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Preference number: 2 (lower is better) Translates to: VKQWSFQLCIALEDSTLSGYFSP*SLPRKP Trigger: TGGTTTTCTGGGAAGAGATCAAGGACTAAAATACCC...GGAAAGAGTGGAGTCTTCTAGGGCAATGCACAGCTGGAAAGACCACTGTTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR TCA 90 bp | GTAAAACAGTGGTCTTTCCAGCTGTGCATTGCCCTAGAAGACTCCACTCTTTCCGCATGCATATTCTTTTaGGACAGGACCTTACCACAT | + |
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Preference number: 2 (lower is better) Translates to: VKQWSFQLCIALEDSTLSACIFF*DRTLPH Trigger: ATGTGGTAAGGTCCTGTCTCAAAAGAATATGCATGC...GGAAAGAGTGGAGTCTTCTAGGGCAATGCACAGCTGGAAAGACCACTGTTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGAGTTCCTGAGCCTGGAATTAACTGTATACTTCATCTCTAAAAGTAGCACCTGTGACCAGCAAGTTTaGGTCTCACAGACTCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: KEFLSLELTVYFISKSSTCDQQV*VSQTLG Trigger: GCCCAGAGTCTGTGAGACTCAAACTTGCTGGTCACA...GGTGCTACTTTTAGAGATGAAGTATACAGTTAATTCCAGGCTCAGGAACTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR CCA 90 bp | CAACTCCAAGTGTGGAGACACACACACATCAGCAGTTGGTCTTCAAGGTCAGCCATTCACATACACTCTTaGTTCTATTATCCCCATTTG | + |
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Preference number: 2 (lower is better) Translates to: QLQVWRHTHISSWSSRSAIHIHS*FYYPHL Trigger: CAAATGGGGATAATAGAACCAAGAGTGTATGTGAAT...GGCTGACCTTGAAGACCAACTGCTGATGTGTGTGTGTCTCCACACTTGGAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR CAA 90 bp | TTGAATCTGTGCTCTAAATGTTTGACTCCATTGGAACAAAACAGGTaGACCCCTGAAGAACTCCACGAAAGAATCACATGTGCTGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LNLCSKCLTPLEQNR*TPEELHERITCAEL Trigger: GAGCTCAGCACATGTGATTCTTTCGTGGAGTTCTTCAGGGGTCAACCTGTTTTGTTCCAATGGAGTCAAACATTTAGAGCACAGATTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR TCA 90 bp | GCGCTAACGCCAGCAACAGTTTTCATTAGTTTTAATTCTCATAGAGCTGAGCTTGAGAAGTTGAAATTGTaGCCAGCAAGTTTGAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: ALTPATVFISFNSHRAELEKLKL*PASLSL Trigger: GAGACTCAAACTTGCTGGTCACAATTTCAACTTCTC...AAGCTCAGCTCTATGAGAATTAAAACTAATGAAAACTGTTGCTGGCGTTAGCGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR CCA 90 bp | CTCATAGAGCTGAGCTTTGCCTTTATTTTGAGTTACTCAACGAAGTGCCACCGAATTCACATACACTCTTaGTTCTATTATCCCCATTTG | + |
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Preference number: 2 (lower is better) Translates to: LIELSFAFILSYSTKCHRIHIHS*FYYPHL Trigger: CAAATGGGGATAATAGAACCAAGAGTGTATGTGAAT...TCGGTGGCACTTCGTTGAGTAACTCAAAATAAAGGCAAAGCTCAGCTCTATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGGGCAGAGTCTCCTCAAATCTGACTCCGGCAGCTCTAGCAGCAGCCCCCTCAGGCTATCCTTGAGCTaGCACAAGTCCACCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: TGQSLLKSDSGSSSSSPLRLSLS*HKSTCL Trigger: GAGGCAGGTGGACTTGTGCAAGCTCAAGGATAGCCT...GAGGGGGCTGCTGCTAGAGCTGCCGGAGTCAGATTTGAGGAGACTCTGCCCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR CCA 72 bp | ACTCCGGCAGCTCTAGCAGCAGCCCCCTCTCAGCCCTaGTCCGACCCATCATCTTATGAACATAGACTCTGC | + |
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Preference number: 3 (lower is better) Translates to: TPAALAAAPSQP*SDPSSYEHRLC Trigger: GCAGAGTCTATGTTCATAAGATGATGGGTCGGACCAGGGCTGAGAGGGGGCTGCTGCTAGAGCTGCCGGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR GCA 72 bp | TGGGAAGAGAGGCCCCTAGGTCTTGCAAACTTTATATaGCCCAGTACAGGGGAACGCCAGGGCCAAGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: WEERPLGLANFI*PSTGERQGQEV Trigger: CACTTCTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGACCTAGGGGCCTCTCTTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGGGCAGAGTCTCCTCAAATCTGACTCCGGCAGCTCTAGCAGCAGCCCCCTCTGTCTCACTCCACTGTaGCCTTCTGTCTCTGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: TGQSLLKSDSGSSSSSPLCLTPL*PSVSVF Trigger: AAAAACAGAGACAGAAGGCAACAGTGGAGTGAGACA...GAGGGGGCTGCTGCTAGAGCTGCCGGAGTCAGATTTGAGGAGACTCTGCCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR GCA 72 bp | AGTCCATCCAGAAGGGAGATGCTGCCAGTTCGCCACTaGAGACACACAGTAGTCTCACTGGAGACACTGAGT | + |
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Preference number: 3 (lower is better) Translates to: SPSRREMLPVRH*RHTVVSLETLS Trigger: ACTCAGTGTCTCCAGTGAGACTACTGTGTGTCTGCAGTGGCGAACTGGCAGCATCTCCCTTCTGGATGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR CCA 72 bp | GCTTGCACAAGTCCACCTGCCTCTGTCTCCAAGTTCTaGAAAGTGCCTCTGTCTCACTCCACTGTTGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: ACTSPPASVSKF*KVPLSHSTVAF Trigger: GAAGGCAACAGTGGAGTGAGACAGAGGCACTTTCCAGAACTTGGAGACAGAGGCAGGTGGACTTGTGCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR CCA 72 bp | TTGTGTGTCAGGAGCAGGGGACTCCACAAATGCCCCTaGATCTTCCTGTTGGTTGGGTGCCTGCTATTGATG | + |
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Preference number: 3 (lower is better) Translates to: LCVRSRGLHKCP*IFLLVGCLLLM Trigger: CATCAATAGCAGGCACCCAACCAACAGGAAGATCCAGGGGCATTTGTGGAGTCCCCTGCTCCTGACACACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR TCA 72 bp | AGCCACTGTCCCCTGCTCCTGACATGCTTCCTGCTATaGCCAGGTTTGGAATTTGGCTTCAAGCTGAACTGG | + |
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Preference number: 3 (lower is better) Translates to: SHCPLLLTCFLL*PGLEFGFKLNW Trigger: CCAGTTCAGCTTGAAGCCAAATTCCAAACCTGGTCATAGCAGGAAGCATGTCAGGAGCAGGGGACAGTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR TCA 72 bp | TTCCAGCTGTGCACAGCCTCATACCAACCTATCATCTaGTACCTGTTGTGTGTCAGGAGCAGGGGACTCCAC | + |
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Preference number: 3 (lower is better) Translates to: FQLCTASYQPII*YLLCVRSRGLH Trigger: GTGGAGTCCCCTGCTCCTGACACACAACAGGTATCAGATGATAGGTTGGTATGAGGCTGTGCACAGCTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR GCA 72 bp | CAAGTCCACCTGCCTCTGTCTCCAAGTTCTGGAAAGTaGCTCTGTCTCACTCCACTGTTGCCTTCTGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QVHLPLSPSSGK*LCLTPLLPSVS Trigger: AGAGACAGAAGGCAACAGTGGAGTGAGACAGAGGCACTTTCCAGAACTTGGAGACAGAGGCAGGTGGACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| 3UTR TCA 72 bp | TCCTGCTATGACCAGGTTTGGAATTTGGCTTCAAGCTaGACTGGGCAGAGTCTCCTCAAATCTGACTCCGGC | + |
|
Preference number: 3 (lower is better) Translates to: SCYDQVWNLASS*TGQSLLKSDSG Trigger: GCCGGAGTCAGATTTGAGGAGACTCTGCCCAGTTCAGCTTGAAGCCAAATTCCAAACCTGGTCATAGCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| 3UTR GCA 72 bp | GAACTAACCAGTACCCCCGGAGCTCGTGTCTCTAGCTaGATATGTAGCAGAAGATGGCCTAGTGAACCATCA | + |
|
Preference number: 3 (lower is better) Translates to: ELTSTPGARVSS*ICSRRWPSEPS Trigger: TGATGGTTCACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACACGAGCTCCGGGGGTACTGGTTAGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| 3UTR CCA 72 bp | CCTGACATGCTTCCTGCTATGACCAGGTTTGGAATTTaGCTTCAAGCTGAACTGGGCAGAGTCTCCTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: PDMLPAMTRFGI*LQAELGRVSSN Trigger: ATTTGAGGAGACTCTGCCCAGTTCAGCTTGAAGCCAAATTCCAAACCTGGTCATAGCAGGAAGCATGTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAAAACCAAAGTCCATCCAGAAGGGAGATGCTGCCAGTTCGCCACTGCAGAAGCTTTGCCTTTATTTaGAGTTACTCAACGAAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PENQSPSRREMLPVRHCRSFAFI*SYSTKC Trigger: GCACTTCGTTGAGTAACTCAAAATAAAGGCAAAGCT...TCTGCAGTGGCGAACTGGCAGCATCTCCCTTCTGGATGGACTTTGGTTTTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCACCTGCCTCTGTCTCCAAGTTCTGGAAAGTGCCTCTGTCTCACTCCACTGTGAACCTGTTAAAGTGTaGGTAAATGAATACAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: STCLCLQVLESASVSLHCEPVKV*VNEYRT Trigger: AGTCCTGTATTCATTTACCAACACTTTAACAGGTTC...ACAGTGGAGTGAGACAGAGGCACTTTCCAGAACTTGGAGACAGAGGCAGGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| 3UTR GCA 72 bp | CTGAGCTTTGCCTTTATTTTGAGTTACTCAACGAAGTaGCACCGATTAGGAACCAGGAGCCCAGTATTCGTC | + |
|
Preference number: 3 (lower is better) Translates to: LSFAFILSYSTK*HRLGTRSPVFV Trigger: GACGAATACTGGGCTCCTGGTTCCTAATCGGTGGCACTTCGTTGAGTAACTCAAAATAAAGGCAAAGCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAAAACAGTGGTCTTTCCAGCTGTGCATTGCCCTAGAAGACTCCACTCTTTCCCACAAAGCAAGGCTCTaGGGTATTTTAGTCCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: VKQWSFQLCIALEDSTLSHKARL*GILVLD Trigger: ATCAAGGACTAAAATACCCAAGAGCCTTGCTTTGTG...GGAAAGAGTGGAGTCTTCTAGGGCAATGCACAGCTGGAAAGACCACTGTTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| 3UTR GCA 72 bp | ACATGTGCTGAGCTCAGGCTGTGCCCTATTCTAAATTaGTTCACATTGTGTAAAACAGTGGTCTTTCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TCAELRLCPILN*FTLCKTVVFPA Trigger: AGCTGGAAAGACCACTGTTTTACACAATGTGAAGCAATTTAGAATAGGGCACAGCCTGAGCTCAGCACATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| 3UTR TCA 72 bp | TACACACAAAGCAAGGCTCTTGGGTATTTTAGTCCTTaGTCTCTTCCCAGAAAACCAAAGTCCATCCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: YTQSKALGYFSP*SLPRKPKSIQK Trigger: CTTCTGGATGGACTTTGGTTTTCTGGGAAGAGATCAAGGACTAAAATACCCAAGAGCCTTGCTTTGTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| 3UTR GCA 72 bp | CTCCACGAAAGAATCACATGTGCTGAGCTCAGGCTGTaGCCTATTCTAAATTGCTTCACATTGTGTAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LHERITCAELRL*PILNCFTLCKT Trigger: TGTTTTACACAATGTGAAGCAATTTAGAATAGGGCACAGCCTGAGCTCAGCACATGTGATTCTTTCGTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| 3UTR CCA 72 bp | GGGGGAGATTCTAGTGCACATATTCACATACACTCTTaGTTCTATTATCCCCATTTGATTGAGCTGACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GGDSSAHIHIHS*FYYPHLIELTD Trigger: ATCTGTCAGCTCAATCAAATGGGGATAATAGAACCAAGAGTGTATGTGAATATGTGCACTAGAATCTCCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCATAGAGCTGAGCTTTGCCTTTATTTTGAGTTACTCAACGAAGTGCCACCGAGAACCTGTTAAAGTGTaGGTAAATGAATACAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: LIELSFAFILSYSTKCHREPVKV*VNEYRT Trigger: AGTCCTGTATTCATTTACCAACACTTTAACAGGTTC...TCGGTGGCACTTCGTTGAGTAACTCAAAATAAAGGCAAAGCTCAGCTCTATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR GCA 90 bp | CCACCTGTTTGTCCACCTGGACCTGAGCCACTGTCCCCTGCTCCTGACATGCTTTCTGCACAGAACAGGTaGAGAAGGATAGGCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PPVCPPGPEPLSPAPDMLSAQNR*RRIGSS Trigger: CGAGCTGCCTATCCTTCTGCACCTGTTCTGTGCAGA...AAGCATGTCAGGAGCAGGGGACAGTGGCTCAGGTCCAGGTGGACAAACAGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| 3UTR CAA 72 bp | TGCCCCTGGATCTTCCTGTTGGTTGGGTGCCTGCTATaGATGAGACTGCTTGACCTGTCTGCCAGCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: CPWIFLLVGCLL*MRLLDLSASPP Trigger: AGGTGGGCTGGCAGACAGGTCAAGCAGTCTCATCAATAGCAGGCACCCAACCAACAGGAAGATCCAGGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR TCA 90 bp | TCCACCTGCCTCTGTCTCCAAGTTCTGGAAAGTGCCTCTGTCTCACTCCACTGTACTCCAAGAACAGGGTaGGGTAGGTCTGAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: STCLCLQVLESASVSLHCTPRTG*GRSEPG Trigger: GCCTGGCTCAGACCTACCTCACCCTGTTCTTGGAGT...ACAGTGGAGTGAGACAGAGGCACTTTCCAGAACTTGGAGACAGAGGCAGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| 3UTR CAA 72 bp | GCAACTCCAAGTGTGGAGACACACACACATCAGCAGTaGGTCTTCAAGGTCAGCCTGAGCTTCAAGGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATPSVETHTHQQ*VFKVSLSFKGG Trigger: CCCGCCCTTGAAGCTCAGGCTGACCTTGAAGACCAACTGCTGATGTGTGTGTGTCTCCACACTTGGAGTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR GCA 90 bp | GTAAAACAGTGGTCTTTCCAGCTGTGCATTGCCCTAGAAGACTCCACTCTTTCCGCCATCATGGCCTCCTaGAGAGACGTGTCTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VKQWSFQLCIALEDSTLSAIMAS*RDVSAQ Trigger: CTGTGCAGACACGTCTCTGCAGGAGGCCATGATGGC...GGAAAGAGTGGAGTCTTCTAGGGCAATGCACAGCTGGAAAGACCACTGTTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR CCA 90 bp | CCACCTGTTTGTCCACCTGGACCTGAGCCACTGTCCCCTGCTCCTGACATGCTTATTGAAGAGCATCTTTaGAGTCACAACCGTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPVCPPGPEPLSPAPDMLIEEHL*SHNRAE Trigger: TTCAGCACGGTTGTGACTCCAAAGATGCTCTTCAAT...AAGCATGTCAGGAGCAGGGGACAGTGGCTCAGGTCCAGGTGGACAAACAGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGCTGGAATCCGCCATCATGGCCTCCTaGAGAGACGTGTCTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GLEPVKVLVNEYRTQLESAIMAS*RDVSAQ Trigger: CTGTGCAGACACGTCTCTGCAGGAGGCCATGATGGC...GGATTCCAGCTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTTCCAGCTGTGCATTGCCCTAGAAGACTCCACTCTTTCCAGCTGTGCACACTGAGCCAGGCAGAATaGGTAAGATATGACCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFPAVHCPRRLHSFQLCTLSQAE*VRYDLP Trigger: AGGAAGGTCATATCTTACCCATTCTGCCTGGCTCAG...TGTGCACAGCTGGAAAGAGTGGAGTCTTCTAGGGCAATGCACAGCTGGAAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR TCA 90 bp | ACAGACTCTGGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGACTCCAAGAACAGGGTaGGGTAGGTCTGAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TDSGLEPVKVLVNEYRTQTPRTG*GRSEPG Trigger: GCCTGGCTCAGACCTACCTCACCCTGTTCTTGGAGT...CTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCCAGAGTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGCTGGAAGCCATCATGGCCTCCTaGAGAGACGTGTCTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SGLEPVKVLVNEYRTQLEAIMAS*RDVSAQ Trigger: CTGTGCAGACACGTCTCTGCAGGAGGCCATGATGGC...TTCCAGCTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR CCA 90 bp | TCCACCTGCCTCTGTCTCCAAGTTCTGGAAAGTGCCTCTGTCTCACTCCACTGTATTGAAGAGCATCTTTaGAGTCACAACCGTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: STCLCLQVLESASVSLHCIEEHL*SHNRAE Trigger: TTCAGCACGGTTGTGACTCCAAAGATGCTCTTCAAT...ACAGTGGAGTGAGACAGAGGCACTTTCCAGAACTTGGAGACAGAGGCAGGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTGAGCCTGGAATTAACTGTATACTTCATCTCTAAAAGTAGCACCCTGACAACTCCAAGAACAGGGTaGGGTAGGTCTGAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLSLELTVYFISKSSTLTTPRTG*GRSEPG Trigger: GCCTGGCTCAGACCTACCTCACCCTGTTCTTGGAGT...TGTCAGGGTGCTACTTTTAGAGATGAAGTATACAGTTAATTCCAGGCTCAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAAAACCAAAGTCCATCCAGAAGGGAGATGCTGCCAGTTCGCCACTGCAGATATGACCTTCCTGCTTaGAAGGAAATTGAAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PENQSPSRREMLPVRHCRYDLPA*KEIEEH Trigger: ATGCTCTTCAATTTCCTTGCAAGCAGGAAGGTCATA...TCTGCAGTGGCGAACTGGCAGCATCTCCCTTCTGGATGGACTTTGGTTTTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGCTGGAATCCTCTGCACAGAACAGGTaGAGAAGGATAGGCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GLEPVKVLVNEYRTQLESSAQNR*RRIGSS Trigger: CGAGCTGCCTATCCTTCTGCACCTGTTCTGTGCAGA...GGATTCCAGCTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGCTGGAATCCCAGTGCTATGCACACTaGCCAGCTCATGATGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLEPVKVLVNEYRTQLESQCYAH*PAHDEK Trigger: CTTCTCATCATGAGCTGGGCAGTGTGCATAGCACTG...GGATTCCAGCTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR GCA 90 bp | CATACACACAAAGCAAGGCTCTTGGGTATTTTAGTCCTTGATCTCTTCCCAGAATCTGCACAGAACAGGTaGAGAAGGATAGGCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HTHKARLLGILVLDLFPESAQNR*RRIGSS Trigger: CGAGCTGCCTATCCTTCTGCACCTGTTCTGTGCAGA...TTCTGGGAAGAGATCAAGGACTAAAATACCCAAGAGCCTTGCTTTGTGTGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGCTGGAATCCCAGGCTATAGATGAATaGATTCAGCGCGGGTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLEPVKVLVNEYRTQLESQAIDE*IQRGSD Trigger: ATCGGACCCGCGCTGAATCCATTCATCTATAGCCTG...GGATTCCAGCTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR TCA 90 bp | GTAAAACAGTGGTCTTTCCAGCTGTGCATTGCCCTAGAAGACTCCACTCTTTCCTGCTTGCAAGGAAATTaGAGAGCATCTTTGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VKQWSFQLCIALEDSTLSCLQGN*RASLES Trigger: TGACTCCAAAGATGCTCTTCAATTTCCTTGCAAGCA...GGAAAGAGTGGAGTCTTCTAGGGCAATGCACAGCTGGAAAGACCACTGTTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGCTGGAATCCAAATACATGGGTGTCTaGAGAGAGACATCGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLEPVKVLVNEYRTQLESKYMGV*RETSRA Trigger: GGCTCTCGATGTCTCTCTGCAGACACCCATGTATTT...GGATTCCAGCTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGCTGGAACAGTGCTATGCACACTaGCCAGCTCATGATGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGLEPVKVLVNEYRTQLEQCYAH*PAHDEK Trigger: CTTCTCATCATGAGCTGGGCAGTGTGCATAGCACTG...TTCCAGCTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR CCA 90 bp | GACTCTGGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGCTGCTGAGCCAGGCAGAATaGGTAAGATATGACCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DSGLEPVKVLVNEYRTQLLSQAE*VRYDLP Trigger: AGGAAGGTCATATCTTACCCATTCTGCCTGGCTCAG...CAGCTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCCAGAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGCTGGAACAGGCTATAGATGAATaGATTCAGCGCGGGTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SGLEPVKVLVNEYRTQLEQAIDE*IQRGSD Trigger: ATCGGACCCGCGCTGAATCCATTCATCTATAGCCTG...TTCCAGCTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| 3UTR CAA 72 bp | GAGCTCAGGCTGTGCCCTATTCTAAATTGCTTCACATaGTGTAAAACAGTGGTCTTTCCAGCTGTGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: ELRLCPILNCFT*CKTVVFPAVHC Trigger: GCAATGCACAGCTGGAAAGACCACTGTTTTACACAATGTGAAGCAATTTAGAATAGGGCACAGCCTGAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR TCA 90 bp | GGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGCTGGAATCCAGAATGGGTAAGATATaGCCTTCCTGCTTGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLEPVKVLVNEYRTQLESRMGKI*PSCLQG Trigger: TCCTTGCAAGCAGGAAGGTCATATCTTACCCATTCT...GGATTCCAGCTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR TCA 90 bp | ACAGACTCTGGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGAGAATGGGTAAGATATaGCCTTCCTGCTTGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TDSGLEPVKVLVNEYRTQRMGKI*PSCLQG Trigger: TCCTTGCAAGCAGGAAGGTCATATCTTACCCATTCT...CTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCCAGAGTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR GCA 90 bp | GCGCTAACGCCAGCAACAGTTTTCATTAGTTTTAATTCTCATAGAGCTGAGCTTAAATACATGGGTGTCTaGAGAGAGACATCGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALTPATVFISFNSHRAELKYMGV*RETSRA Trigger: GGCTCTCGATGTCTCTCTGCAGACACCCATGTATTT...AAGCTCAGCTCTATGAGAATTAAAACTAATGAAAACTGTTGCTGGCGTTAGCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGCTGGAATCCATTGAAGAGCATCTTTaGAGTCACAACCGTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLEPVKVLVNEYRTQLESIEEHL*SHNRAE Trigger: TTCAGCACGGTTGTGACTCCAAAGATGCTCTTCAAT...GGATTCCAGCTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGCTGGAATGCTTGCAAGGAAATTaGAGAGCATCTTTGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGLEPVKVLVNEYRTQLECLQGN*RASLES Trigger: TGACTCCAAAGATGCTCTTCAATTTCCTTGCAAGCA...TTCCAGCTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR GCA 90 bp | GACTCTGGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGCTGTATGACCTTCCTGCTTaGAAGGAAATTGAAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DSGLEPVKVLVNEYRTQLYDLPA*KEIEEH Trigger: ATGCTCTTCAATTTCCTTGCAAGCAGGAAGGTCATA...CAGCTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCCAGAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGCTGGAACTAGAAGGCAATTCTTaGGCTTTTCCTGTATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGLEPVKVLVNEYRTQLELEGNS*AFPVSL Trigger: GAGAGATACAGGAAAAGCCCAAGAATTGCCTTCTAG...TTCCAGCTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
||
| 3UTR CAA 72 bp | TGCTCTAAATGTTTGACTCCATTGGAACAAAACAGGTaGACCCCTGAAGAACTCCACGAAAGAATCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: CSKCLTPLEQNR*TPEELHERITC Trigger: ACATGTGATTCTTTCGTGGAGTTCTTCAGGGGTCAACCTGTTTTGTTCCAATGGAGTCAAACATTTAGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| CDS-3UTR TCA 90 bp | GCGCTAACGCCAGCAACAGTTTTCATTAGTTTTAATTCTCATAGAGCTGAGCTTTGCTTGCAAGGAAATTaGAGAGCATCTTTGGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: ALTPATVFISFNSHRAELCLQGN*RASLES Trigger: TGACTCCAAAGATGCTCTTCAATTTCCTTGCAAGCA...AAGCTCAGCTCTATGAGAATTAAAACTAATGAAAACTGTTGCTGGCGTTAGCGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| CDS-3UTR GCA 90 bp | ACAGACTCTGGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGTATGACCTTCCTGCTTaGAAGGAAATTGAAGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: TDSGLEPVKVLVNEYRTQYDLPA*KEIEEH Trigger: ATGCTCTTCAATTTCCTTGCAAGCAGGAAGGTCATA...CTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCCAGAGTCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| CDS-3UTR CCA 90 bp | ACATCCGTATTTACTCATAAAGACGACAAACATGAAAGAAAAGTGTCTGTGTGTCAGGCTATAGATGAATaGATTCAGCGCGGGTCCGAT | + |
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Preference number: 4 (lower is better) Translates to: TSVFTHKDDKHERKVSVCQAIDE*IQRGSD Trigger: ATCGGACCCGCGCTGAATCCATTCATCTATAGCCTG...ACACACAGACACTTTTCTTTCATGTTTGTCGTCTTTATGAGTAAATACGGATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| CDS-3UTR CCA 90 bp | GCGCTAACGCCAGCAACAGTTTTCATTAGTTTTAATTCTCATAGAGCTGAGCTTCTAGAAGGCAATTCTTaGGCTTTTCCTGTATCTCTC | + |
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Preference number: 4 (lower is better) Translates to: ALTPATVFISFNSHRAELLEGNS*AFPVSL Trigger: GAGAGATACAGGAAAAGCCCAAGAATTGCCTTCTAG...AAGCTCAGCTCTATGAGAATTAAAACTAATGAAAACTGTTGCTGGCGTTAGCGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| CDS-3UTR CCA 90 bp | ACATCCGTATTTACTCATAAAGACGACAAACATGAAAGAAAAGTGTCTGTGTGTCTAGAAGGCAATTCTTaGGCTTTTCCTGTATCTCTC | + |
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Preference number: 4 (lower is better) Translates to: TSVFTHKDDKHERKVSVCLEGNS*AFPVSL Trigger: GAGAGATACAGGAAAAGCCCAAGAATTGCCTTCTAG...ACACACAGACACTTTTCTTTCATGTTTGTCGTCTTTATGAGTAAATACGGATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| 3UTR CAA 72 bp | CATATTCACATACACTCTTGGTTCTATTATCCCCATTaGATTGAGCTGACAGATGACGTATTGACTCCTAAT | + |
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Preference number: 4 (lower is better) Translates to: HIHIHSWFYYPH*IELTDDVLTPN Trigger: ATTAGGAGTCAATACGTCATCTGTCAGCTCAATCAAATGGGGATAATAGAACCAAGAGTGTATGTGAATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| CDS GCA 90 bp | TGCGAAGGTAGGAGAGCGCAATCAGGAGGAAGGGAACCAGCACCGTaGCAGCCCCTCCAACGGCCATCATGGCCTCCTGCAGAGACGTGT | + |
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Preference number: 5 (lower is better) Translates to: CEGRRAQSGGREPAP*QPLQRPSWPPAETC Trigger: ACACGTCTCTGCAGGAGGCCATGATGGCCGTTGGAGGGGCTGGCACGGTGCTGGTTCCCTTCCTCCTGATTGCGCTCTCCTACCTTCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| CDS CCA 90 bp | GGAGGAAGGGAACCAGCACCGTGCCAGCCCCTCCAACGGCCATCATaGCCTCCTGCAGAGACGTGTCTGCACAGAACAGGTGCAGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: GGREPAPCQPLQRPS*PPAETCLHRTGAEG Trigger: TCCTTCTGCACCTGTTCTGTGCAGACACGTCTCTGCAGGAGGCCATGATGGCCGTTGGAGGGGCTGGCACGGTGCTGGTTCCCTTCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| CDS GCA 90 bp | GCCAGCCCCTCCAACGGCCATCATGGCCTCCTGCAGAGACGTGTCTaGACAGAACAGGTGCAGAAGGATAGGCAGCTCGCAGAAAAGATA | + |
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Preference number: 5 (lower is better) Translates to: ASPSNGHHGLLQRRV*TEQVQKDRQLAEKI Trigger: TATCTTTTCTGCGAGCTGCCTATCCTTCTGCACCTGTTCTGTGCAGACACGTCTCTGCAGGAGGCCATGATGGCCGTTGGAGGGGCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| CDS-3UTR CAA 90 bp | GGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGCTGGAATCCCTGCTTGCAAGGAAATaGAAGAGCATCTTTGGAGTC | + |
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Preference number: 5 (lower is better) Translates to: GLEPVKVLVNEYRTQLESLLARK*KSIFGV Trigger: GACTCCAAAGATGCTCTTCAATTTCCTTGCAAGCAG...GGATTCCAGCTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| CDS-3UTR CAA 90 bp | TCTGGGCTTGAACCTGTTAAAGTGTTGGTAAATGAATACAGGACTCAGCTGGAACTGCTTGCAAGGAAATaGAAGAGCATCTTTGGAGTC | + |
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Preference number: 5 (lower is better) Translates to: SGLEPVKVLVNEYRTQLELLARK*KSIFGV Trigger: GACTCCAAAGATGCTCTTCAATTTCCTTGCAAGCAG...TTCCAGCTGAGTCCTGTATTCATTTACCAACACTTTAACAGGTTCAAGCCCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| CDS-3UTR CAA 90 bp | AATTCTCATAGAGCTGAGCTTTGCCTTTATTTTGAGTTACTCAACGAAGTGCCACTGCTTGCAAGGAAATaGAAGAGCATCTTTGGAGTC | + |
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Preference number: 5 (lower is better) Translates to: NSHRAELCLYFELLNEVPLLARK*KSIFGV Trigger: GACTCCAAAGATGCTCTTCAATTTCCTTGCAAGCAG...TGGCACTTCGTTGAGTAACTCAAAATAAAGGCAAAGCTCAGCTCTATGAGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| CDS TCA 72 bp | GATGGTGCTGGAATTCTCGGGGCTCAGGCCTGCGGCTaGGCCATACCTGCCCAGCGTCCTGATGTGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: DGAGILGAQACG*AIPAQRPDVGK Trigger: CTTCCCCACATCAGGACGCTGGGCAGGTATGGCTCAGCCGCAGGCCTGAGCCCCGAGAATTCCAGCACCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216965.2 |
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| CDS GCA 72 bp | AGGAGAGCGCAATCAGGAGGAAGGGAACCAGCACCGTaGCAGCCCCTCCAACGGCCATCATGGCCTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: RRAQSGGREPAP*QPLQRPSWPPA Trigger: TGCAGGAGGCCATGATGGCCGTTGGAGGGGCTGGCACGGTGCTGGTTCCCTTCCTCCTGATTGCGCTCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| CDS CCA 72 bp | GAACCAGCACCGTGCCAGCCCCTCCAACGGCCATCATaGCCTCCTGCAGAGACGTGTCTGCACAGAACAGGT | + |
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Preference number: 6 (lower is better) Translates to: EPAPCQPLQRPS*PPAETCLHRTG Trigger: ACCTGTTCTGTGCAGACACGTCTCTGCAGGAGGCCATGATGGCCGTTGGAGGGGCTGGCACGGTGCTGGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| CDS GCA 72 bp | TCCAACGGCCATCATGGCCTCCTGCAGAGACGTGTCTaGACAGAACAGGTGCAGAAGGATAGGCAGCTCGCA | + |
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Preference number: 6 (lower is better) Translates to: SNGHHGLLQRRV*TEQVQKDRQLA Trigger: TGCGAGCTGCCTATCCTTCTGCACCTGTTCTGTGCAGACACGTCTCTGCAGGAGGCCATGATGGCCGTTGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| CDS TCA 72 bp | GATGGTGCTGGAATTCTCGGGGCTCAGGCCTGCGGCTaGGCCATACCTGTCCAAACGAGAAGAAATCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: DGAGILGAQACG*AIPVQTRRNRR Trigger: CCTTCGATTTCTTCTCGTTTGGACAGGTATGGCTCAGCCGCAGGCCTGAGCCCCGAGAATTCCAGCACCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054683.8 |
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| CDS GCA 72 bp | GGCACAAAAACCTGTGACCCACACGGCCACTGCCAGTaGTATGCACACTGCCCAGCTCATGATGAGAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: GTKTCDPHGHCQ*YAHCPAHDEKV Trigger: TACCTTCTCATCATGAGCTGGGCAGTGTGCATAGCACTGGCAGTGGCCGTGTGGGTCACAGGTTTTTGTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| CDS TCA 72 bp | TGGGTGTCTGCAGAGAGACATCGAGAGCCACTAATATaGCCACAGCTGTATTCCCCAAACAGCTGGCTAGGT | + |
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Preference number: 6 (lower is better) Translates to: WVSAERHREPLI*PQLYSPNSWLG Trigger: ACCTAGCCAGCTGTTTGGGGAATACAGCTGTGGTCATATTAGTGGCTCTCGATGTCTCTCTGCAGACACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| CDS CCA 72 bp | CAAGAACAGGGTGAGGTAGGTCTGAGCCAGGCAGAATaGGTAAGATATGACCTTCCTGCTTGCAAGGAAATT | + |
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Preference number: 6 (lower is better) Translates to: QEQGEVGLSQAE*VRYDLPACKEI Trigger: AATTTCCTTGCAAGCAGGAAGGTCATATCTTACCCATTCTGCCTGGCTCAGACCTACCTCACCCTGTTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
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| CDS TCA 72 bp | CCAAACAGCTGGCTAGGTAGACCAGAGAGAAGAAGATaGAGAGAGGAATCTCAGTCTGGGGTTGATCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: PNSWLGRPERRR*REESQSGVDQK Trigger: TTTCTGATCAACCCCAGACTGAGATTCCTCTCTTCATCTTCTTCTCTCTGGTCTACCTAGCCAGCTGTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054683.8 ENSMUST00000214990.2 ENSMUST00000216965.2 |
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