Pregenerated sensors for OLFR320 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000107711Ensembl transcript IDs: ENSMUST00000204718.3, ENSMUST00000214662.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGAGCCAACATTCAGATTTAGACCATCACCTCAGTGTGACACTGTaGTTGAAGGATTGTGCTCTTGTTCAGTCACTGAGACAAGCTGAT | + |
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Preference number: 1 (lower is better) Translates to: QSQHSDLDHHLSVTL*LKDCALVQSLRQAD Trigger: ATCAGCTTGTCTCAGTGACTGAACAAGAGCACAATCCTTCAATCACAGTGTCACACTGAGGTGATGGTCTAAATCTGAATGTTGGCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGCCAGCCACTGTACTGACTCCCACATTCTGAGAGCCTTGCATCAGGGCAGGCTCAGTGTGACACTGTaGTTGAAGGATTGTGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: IASHCTDSHILRALHQGRLSVTL*LKDCAL Trigger: AAGAGCACAATCCTTCAATCACAGTGTCACACTGAG...CCTGCCCTGATGCAAGGCTCTCAGAATGTGGGAGTCAGTACAGTGGCTGGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGGCCAGGGCCCTTCAATCTCCTTCAGAGCCAACATTCAGATTTAGACCAGTCACTGAGACAAGCTaGTGGACTTCTACCAGAATA | + |
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Preference number: 2 (lower is better) Translates to: ARARALQSPSEPTFRFRPVTETS*WTSTRI Trigger: TATTCTGGTAGAAGTCCATCAGCTTGTCTCAGTGAC...TGGTCTAAATCTGAATGTTGGCTCTGAAGGAGATTGAAGGGCCCTGGCCCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR-3UTR TCA 90 bp | AGGACAAGAGGCCTCAGATATCCGGGAGTTGCAGCTACAGACAGTTGTGAGCTACTCTTGTTCAGTCACTaGGACAAGCTGATGGACTTC | + |
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Preference number: 2 (lower is better) Translates to: RTRGLRYPGVAATDSCELLLFSH*DKLMDF Trigger: GAAGTCCATCAGCTTGTCTCAGTGACTGAACAAGAG...TAGCTCACAACTGTCTGTAGCTGCAACTCCCGGATATCTGAGGCCTCTTGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCAAATGTACAGCTGTACTCATAAACTGCAGAAAGAGCATCCAGAGTACGAGCATCAGGGCAGGAGGTaGTGTGGAAAGCCAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: LQMYSCTHKLQKEHPEYEHQGRR*CGKPTQ Trigger: CTGGGTTGGCTTTCCACAGCACCTCCTGCCCTGATG...CTCGTACTCTGGATGCTCTTTCTGCAGTTTATGAGTACAGCTGTACATTTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR CAA 90 bp | ATGGACTTCTACCAGAATATGGATCCTCAAACTGTCCAAGCAGCGTaGAAGACCAACCTCCATATCAGTACAGAGGCTGACCCAAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: MDFYQNMDPQTVQAA*KTNLHISTEADPKS Trigger: GGACTTTGGGTCAGCCTCTGTACTGATATGGAGGTTGGTCTTCAACGCTGCTTGGACAGTTTGAGGATCCATATTCTGGTAGAAGTCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGGCCAGGGCCCTTCAATCTCCTTCAGAGCCAACATTCAGATTTAGACCAACTTCTACCAGAATATaGATCCTCAAACTGTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: ARARALQSPSEPTFRFRPTSTRI*ILKLSK Trigger: CTTGGACAGTTTGAGGATCCATATTCTGGTAGAAGT...TGGTCTAAATCTGAATGTTGGCTCTGAAGGAGATTGAAGGGCCCTGGCCCTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACAAGAGGCCTCAGATATCCGGGAGTTGCAGCTACAGACAGTTGTGAGCTAACACTGGTGAATTTGTaGAACAGTATTGATAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: RTRGLRYPGVAATDSCELTLVNL*NSIDKG Trigger: CCCTTTATCAATACTGTTCCACAAATTCACCAGTGT...TAGCTCACAACTGTCTGTAGCTGCAACTCCCGGATATCTGAGGCCTCTTGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTACAGACAGTTGTGAGCTACCTTATAAAGGGGCTAGAATTTGAACTCAAGTGGAAAGAGACACAGTaGATACTGACAGACAGATCC | + |
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Preference number: 2 (lower is better) Translates to: QLQTVVSYLIKGLEFELKWKETQ*ILTDRS Trigger: GGATCTGTCTGTCAGTATGCACTGTGTCTCTTTCCA...CTTGAGTTCAAATTCTAGCCCCTTTATAAGGTAGCTCACAACTGTCTGTAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTACAGACAGTTGTGAGCTACCTTATAAAGGGGCTAGAATTTGAACTCAAGTATCATAAGCTAGCGTaGCTGCTGAGAGATCCACAT | + |
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Preference number: 2 (lower is better) Translates to: QLQTVVSYLIKGLEFELKYHKLA*LLRDPH Trigger: ATGTGGATCTCTCAGCAGGCACGCTAGCTTATGATA...CTTGAGTTCAAATTCTAGCCCCTTTATAAGGTAGCTCACAACTGTCTGTAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTACAGACAGTTGTGAGCTACCTTATAAAGGGGCTAGAATTTGAACTCAAGTTACGAAGACACTGGTaGATTTGTGGAACAGTATTG | + |
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Preference number: 2 (lower is better) Translates to: QLQTVVSYLIKGLEFELKLRRHW*ICGTVL Trigger: CAATACTGTTCCACAAATTCACCAGTGTCTTCGTAA...CTTGAGTTCAAATTCTAGCCCCTTTATAAGGTAGCTCACAACTGTCTGTAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTACAGACAGTTGTGAGCTACCTTATAAAGGGGCTAGAATTTGAACTCAAGAGATCCACATACAACTaGACAACTGTTCATGAACAA | + |
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Preference number: 2 (lower is better) Translates to: QLQTVVSYLIKGLEFELKRSTYN*TTVHEQ Trigger: TTGTTCATGAACAGTTGTTCAGTTGTATGTGGATCT...CTTGAGTTCAAATTCTAGCCCCTTTATAAGGTAGCTCACAACTGTCTGTAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAGAGATCCACATACAACTGAACAACTGTTCATGAACAACTGTTCATGGAAAGTGATTGAAGGATTGTaGTCTTGTTCAGTCACTGAG | + |
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Preference number: 2 (lower is better) Translates to: LRDPHTTEQLFMNNCSWKVIEGL*SCSVTE Trigger: CTCAGTGACTGAACAAGAGCACAATCCTTCAATCAC...TTTCCATGAACAGTTGTTCATGAACAGTTGTTCAGTTGTATGTGGATCTCTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR TCA 72 bp | AGAGCATCCAGAGTACGAGATAGCCAGCCACTGTACTaGCTCCCACATTCTGAGAGCCTTGCATCAGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: RASRVRDSQPLY*LPHSESLASGQ Trigger: CTGCCCTGATGCAAGGCTCTCAGAATGTGGGAGTCAGTACAGTGGCTGGCTATCTCGTACTCTGGATGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR TCA 72 bp | GACAGTTGTGAGCTACCTTATAAAGGGGCTAGAATTTaGACTCAAGGCCTCAGGAAGAGCAGCCAGTGCTAC | + |
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Preference number: 3 (lower is better) Translates to: DSCELPYKGARI*TQGLRKSSQCY Trigger: GTAGCACTGGCTGCTCTTCCTGAGGCCTTGAGTTCAAATTCTAGCCCCTTTATAAGGTAGCTCACAACTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTTAAATCTGTGGATGCTGGCATACAATGTTATTCCCAAAACTAGTTTGATCCACATTCTGAGAGCCTaGCATCAGGGCAGGAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: SLNLWMLAYNVIPKTSLIHILRA*HQGRRC Trigger: GCACCTCCTGCCCTGATGCAAGGCTCTCAGAATGTG...GATCAAACTAGTTTTGGGAATAACATTGTATGCCAGCATCCACAGATTTAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR TCA 72 bp | GAAGGATTGTGCTCTTGTTCAGTCACTGAGACAAGCTaGTGGACTTCTACCAGAATATGGATCCTCAAACTG | + |
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Preference number: 3 (lower is better) Translates to: EGLCSCSVTETS*WTSTRIWILKL Trigger: CAGTTTGAGGATCCATATTCTGGTAGAAGTCCATCAGCTTGTCTCAGTGACTGAACAAGAGCACAATCCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR GCA 72 bp | GTCTTCTTGTCTGAATGTCCTTATCATAAGCTAGCGTaGCTGCTGAGAGATCCACATACAACTGAACAACTG | + |
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Preference number: 3 (lower is better) Translates to: VFLSECPYHKLA*LLRDPHTTEQL Trigger: CAGTTGTTCAGTTGTATGTGGATCTCTCAGCAGGCACGCTAGCTTATGATAAGGACATTCAGACAAGAAGAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR TCA 72 bp | CATTCAGATTTAGACCATCACCTCAGTGTGACACTGTaGTTGAAGGATTGTGCTCTTGTTCAGTCACTGAGA | + |
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Preference number: 3 (lower is better) Translates to: HSDLDHHLSVTL*LKDCALVQSLR Trigger: TCTCAGTGACTGAACAAGAGCACAATCCTTCAATCACAGTGTCACACTGAGGTGATGGTCTAAATCTGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR CCA 72 bp | CATACAACTGAACAACTGTTCATGAACAACTGTTCATaGAAAGAGACACAGTGCATACTGACAGACAGATCC | + |
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Preference number: 3 (lower is better) Translates to: HTTEQLFMNNCS*KETQCILTDRS Trigger: GGATCTGTCTGTCAGTATGCACTGTGTCTCTTTCCATGAACAGTTGTTCATGAACAGTTGTTCAGTTGTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR GCA 72 bp | CTGTTCATGAACAACTGTTCATGGAAAGAGACACAGTaGATACTGACAGACAGATCCATTAATGATGTTTAT | + |
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Preference number: 3 (lower is better) Translates to: LFMNNCSWKETQ*ILTDRSINDVY Trigger: ATAAACATCATTAATGGATCTGTCTGTCAGTATGCACTGTGTCTCTTTCCATGAACAGTTGTTCATGAACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR CCA 72 bp | TTAATGATGTTTATTACGAAGACACTGGTGAATTTGTaGAACAGTATTGATAAAGGGAGTCAGCCAGACATG | + |
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Preference number: 3 (lower is better) Translates to: LMMFITKTLVNL*NSIDKGSQPDM Trigger: CATGTCTGGCTGACTCCCTTTATCAATACTGTTCCACAAATTCACCAGTGTCTTCGTAATAAACATCATTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| CDS-3UTR TCA 90 bp | TGTGGAAAGCCAACCCAGGCTGACAGGCAGCCAGAGATACCAGGGCCAGAGCCAACTCTGTCCCTTTCCTaGACCCATCTGGAGTACAAC | + |
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Preference number: 4 (lower is better) Translates to: CGKPTQADRQPEIPGPEPTLSLS*THLEYN Trigger: GTTGTACTCCAGATGGGTTCAGGAAAGGGACAGAGT...TGGCTCTGGCCCTGGTATCTCTGGCTGCCTGTCAGCCTGGGTTGGCTTTCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| CDS-3UTR CCA 90 bp | GCCAGGGCCAGGGCCCTTCAATCTCCTTCAGAGCCAACATTCAGATTTAGACCACATAGGAAGCTAGGATaGCCAGGAAGGGGAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: ARARALQSPSEPTFRFRPHRKLG*PGRGAA Trigger: TGCTGCTCCCCTTCCTGGCCATCCTAGCTTCCTATG...TGGTCTAAATCTGAATGTTGGCTCTGAAGGAGATTGAAGGGCCCTGGCCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| CDS-3UTR TCA 90 bp | GCCAGGGCCAGGGCCCTTCAATCTCCTTCAGAGCCAACATTCAGATTTAGACCAAATGGCCTTGGTGTCTaGGAGGAAGTTAGCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: ARARALQSPSEPTFRFRPNGLGV*EEVSCH Trigger: GTGGCAGCTAACTTCCTCTCAGACACCAAGGCCATT...TGGTCTAAATCTGAATGTTGGCTCTGAAGGAGATTGAAGGGCCCTGGCCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| CDS-3UTR GCA 90 bp | GCCAGGGCCAGGGCCCTTCAATCTCCTTCAGAGCCAACATTCAGATTTAGACCATCCCTTCCAGGAGAATaGAAGGAGTGTGGCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: ARARALQSPSEPTFRFRPSLPGE*KECGWV Trigger: TACCCAGCCACACTCCTTGCATTCTCCTGGAAGGGA...TGGTCTAAATCTGAATGTTGGCTCTGAAGGAGATTGAAGGGCCCTGGCCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| CDS-3UTR CCA 90 bp | ATAGCCAGCCACTGTACTGACTCCCACATTCTGAGAGCCTTGCATCAGGGCAGGTCCATGTGTCCATCCTaGAAAAGGCCAACCAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: IASHCTDSHILRALHQGRSMCPS*KRPTKL Trigger: CAGCTTGGTTGGCCTTTTCCAGGATGGACACATGGA...CCTGCCCTGATGCAAGGCTCTCAGAATGTGGGAGTCAGTACAGTGGCTGGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| CDS-3UTR TCA 90 bp | AAGGATTGTGCTCTTGTTCAGTCACTGAGACAAGCTGATGGACTTCTACCAGAAGGCCACAGTCAGGTGTaGGGAGCAGGTGGACACAGC | + |
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Preference number: 4 (lower is better) Translates to: KDCALVQSLRQADGLLPEGHSQV*GAGGHS Trigger: GCTGTGTCCACCTGCTCCTCACACCTGACTGTGGCC...TTCTGGTAGAAGTCCATCAGCTTGTCTCAGTGACTGAACAAGAGCACAATCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| CDS-3UTR CCA 90 bp | TCAGGAAGAGCAGCCAGTGCTACTAAGGGCCACACCAACACTCATGTCCCACAAGTCTTCACACACCAGTaGAAGGAGAGATGGAACCTC | + |
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Preference number: 4 (lower is better) Translates to: SGRAASATKGHTNTHVPQVFTHQ*KERWNL Trigger: GAGGTTCCATCTCTCCTTCCACTGGTGTGTGAAGAC...TTGTGGGACATGAGTGTTGGTGTGGCCCTTAGTAGCACTGGCTGCTCTTCCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| CDS-3UTR CCA 90 bp | ATAGCCAGCCACTGTACTGACTCCCACATTCTGAGAGCCTTGCATCAGGGCAGGTTTCCTGAACCCATCTaGAGTACAACAACCAAGACC | + |
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Preference number: 4 (lower is better) Translates to: IASHCTDSHILRALHQGRFPEPI*STTTKT Trigger: GGTCTTGGTTGTTGTACTCCAGATGGGTTCAGGAAA...CCTGCCCTGATGCAAGGCTCTCAGAATGTGGGAGTCAGTACAGTGGCTGGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| CDS-3UTR TCA 90 bp | GCCAGGGCCAGGGCCCTTCAATCTCCTTCAGAGCCAACATTCAGATTTAGACCACCACAGAATGGAAGTTaGAACACATACACTGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: ARARALQSPSEPTFRFRPPQNGS*NTYTVC Trigger: GCACACAGTGTATGTGTTTCAACTTCCATTCTGTGG...TGGTCTAAATCTGAATGTTGGCTCTGAAGGAGATTGAAGGGCCCTGGCCCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR CAA 72 bp | ACTCCTGGAGGACAAGAGGCCTCAGATATCCGGGAGTaGCAGCTACAGACAGTTGTGAGCTACCTTATAAAG | + |
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Preference number: 4 (lower is better) Translates to: TPGGQEASDIRE*QLQTVVSYLIK Trigger: CTTTATAAGGTAGCTCACAACTGTCTGTAGCTGCAACTCCCGGATATCTGAGGCCTCTTGTCCTCCAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| 3UTR CAA 72 bp | TTAAAAGCACTGACTGCTCCTCCAGAGAATCCAGGTTaGATTCCCAGGATCCACACTGTGGCTCACAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: LKALTAPPENPG*IPRIHTVAHKH Trigger: ATGCTTGTGAGCCACAGTGTGGATCCTGGGAATCAAACCTGGATTCTCTGGAGGAGCAGTCAGTGCTTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| CDS-3UTR CCA 90 bp | CAGCTACAGACAGTTGTGAGCTACCTTATAAAGGGGCTAGAATTTGAACTCAAGGGTGTGAGGAGCAGGTaGACACAGCTCTACTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: QLQTVVSYLIKGLEFELKGVRSR*TQLYSV Trigger: GACAGAGTAGAGCTGTGTCCACCTGCTCCTCACACC...CTTGAGTTCAAATTCTAGCCCCTTTATAAGGTAGCTCACAACTGTCTGTAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| CDS-3UTR GCA 90 bp | TGTACTCATAAACTGCAGAAAGAGCATCCAGAGTACGAGATAGCCAGCCACTGTGCCTATGAAAGCCACTaGAAAGAGGATGGCAATCAG | + |
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Preference number: 4 (lower is better) Translates to: CTHKLQKEHPEYEIASHCAYESH*KEDGNQ Trigger: CTGATTGCCATCCTCTTTGCAGTGGCTTTCATAGGC...ACAGTGGCTGGCTATCTCGTACTCTGGATGCTCTTTCTGCAGTTTATGAGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| CDS-3UTR CCA 90 bp | TTTAGACCATCACCTCAGTGTGACACTGTGATTGAAGGATTGTGCTCTTGTTCAAGAAACACAAAGGCTTaGACAGCACAGCCCAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: FRPSPQCDTVIEGLCSCSRNTKA*TAQPRK Trigger: CTTTCTGGGCTGTGCTGTCCAAGCCTTTGTGTTTCT...TGAACAAGAGCACAATCCTTCAATCACAGTGTCACACTGAGGTGATGGTCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| CDS-3UTR TCA 90 bp | TCTTTAAATCTGTGGATGCTGGCATACAATGTTATTCCCAAAACTAGTTTGATCGGTTCAGAACAAGGGTaGCGATTGAGTAGAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: SLNLWMLAYNVIPKTSLIGSEQG*RLSRAQ Trigger: CTGTGCTCTACTCAATCGTCACCCTTGTTCTGAACC...GATCAAACTAGTTTTGGGAATAACATTGTATGCCAGCATCCACAGATTTAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| CDS GCA 90 bp | AGGAAGGGGAGCAGCAGAATGACAAGTCCACTCACGAGGACTGTATaGTCATACTGGGACGTGTCTTCACACACCAGTGGAAGGAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: RKGSSRMTSPLTRTV*SYWDVSSHTSGRRD Trigger: ATCTCTCCTTCCACTGGTGTGTGAAGACACGTCCCAGTATGAGCATACAGTCCTCGTGAGTGGACTTGTCATTCTGCTGCTCCCCTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204718.3 ENSMUST00000214662.2 |
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| CDS CCA 90 bp | GAGCACAGCCACTACTTTGTCCCTTCCAGGAGAATGCAAGGAGTGTaGCTGGGTATATGTGGAGAGTCCAGTAACATAGAACAGGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: EHSHYFVPSRRMQGV*LGICGESSNIEQAG Trigger: GCCAGCCTGTTCTATGTTACTGGACTCTCCACATATACCCAGCCACACTCCTTGCATTCTCCTGGAAGGGACAAAGTAGTGGCTGTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204718.3 ENSMUST00000214662.2 |
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| CDS GCA 90 bp | AGAGCCACAGAATGGAAGTTGAAACACATACACTGTGTGCATGAATaGATTGATGGAGCTGCTGCTCCAGGCACCAGCGACCATGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: RATEWKLKHIHCVHE*IDGAAAPGTSDHGA Trigger: TGCTCCATGGTCGCTGGTGCCTGGAGCAGCAGCTCCATCAATGCATTCATGCACACAGTGTATGTGTTTCAACTTCCATTCTGTGGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204718.3 ENSMUST00000214662.2 |
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| CDS CCA 90 bp | AGGATGGCAATCAGTGTGAAGAGGAAAGTGTCCATGTGTCCATCCTaGAAAAGGCCAACCAAGCTGAAGTCTGTCCCACAGCTGCGGTTT | + |
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Preference number: 5 (lower is better) Translates to: RMAISVKRKVSMCPS*KRPTKLKSVPQLRF Trigger: AAACCGCAGCTGTGGGACAGACTTCAGCTTGGTTGGCCTTTTCCAGGATGGACACATGGACACTTTCCTCTTCACACTGATTGCCATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204718.3 ENSMUST00000214662.2 |
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| CDS GCA 90 bp | CAGCCTGATGAGGAGGACCAGTGTGATGTTGCCTATGAAAGCCACTaGAAAGAGGATGGCAATCAGTGTGAAGAGGAAAGTGTCCATGTG | + |
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Preference number: 5 (lower is better) Translates to: QPDEEDQCDVAYESH*KEDGNQCEEESVHV Trigger: CACATGGACACTTTCCTCTTCACACTGATTGCCATCCTCTTTGCAGTGGCTTTCATAGGCAACATCACACTGGTCCTCCTCATCAGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204718.3 ENSMUST00000214662.2 |
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| CDS-3UTR CAA 90 bp | CAGCTACAGACAGTTGTGAGCTACCTTATAAAGGGGCTAGAATTTGAACTCAAGCAGAAACACAAAGGCTaGGACAGCACAGCCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: QLQTVVSYLIKGLEFELKQKHKG*DSTAQK Trigger: TTTCTGGGCTGTGCTGTCCAAGCCTTTGTGTTTCTG...CTTGAGTTCAAATTCTAGCCCCTTTATAAGGTAGCTCACAACTGTCTGTAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214662.2 |
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| CDS TCA 72 bp | GGAGCAGGTGGACACAGCTCTACTCTGTCCCTTTCCTaGACCCATCTGGAGTACAACAACCAAGACCCGAGC | + |
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Preference number: 6 (lower is better) Translates to: GAGGHSSTLSLS*THLEYNNQDPS Trigger: GCTCGGGTCTTGGTTGTTGTACTCCAGATGGGTTCAGGAAAGGGACAGAGTAGAGCTGTGTCCACCTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204718.3 ENSMUST00000214662.2 |
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| CDS TCA 72 bp | TGTCCATGTGTCCATCCTGGAAAAGGCCAACCAAGCTaGAGTCTGTCCCACAGCTGCGGTTTCCTGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: CPCVHPGKGQPS*SLSHSCGFLSP Trigger: TGGAGACAGGAAACCGCAGCTGTGGGACAGACTTCAGCTTGGTTGGCCTTTTCCAGGATGGACACATGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204718.3 ENSMUST00000214662.2 |
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| CDS CAA 72 bp | CTGCAGTCCAGCCTGATGAGGAGGACCAGTGTGATGTaGCCTATGAAAGCCACTGCAAAGAGGATGGCAATC | + |
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Preference number: 6 (lower is better) Translates to: LQSSLMRRTSVM*PMKATAKRMAI Trigger: GATTGCCATCCTCTTTGCAGTGGCTTTCATAGGCAACATCACACTGGTCCTCCTCATCAGGCTGGACTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204718.3 ENSMUST00000214662.2 |
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| CDS CAA 90 bp | GTGTGGAGTCTGCAGTCCAGCCTGATGAGGAGGACCAGTGTGATGTaGCCTATGAAAGCCACTGCAAAGAGGATGGCAATCAGTGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: VWSLQSSLMRRTSVM*PMKATAKRMAISVK Trigger: CTTCACACTGATTGCCATCCTCTTTGCAGTGGCTTTCATAGGCAACATCACACTGGTCCTCCTCATCAGGCTGGACTGCAGACTCCACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204718.3 ENSMUST00000214662.2 |
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| CDS GCA 72 bp | AGCAGCAGAATGACAAGTCCACTCACGAGGACTGTATaGTCATACTGGGACGTGTCTTCACACACCAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SSRMTSPLTRTV*SYWDVSSHTSG Trigger: TCCACTGGTGTGTGAAGACACGTCCCAGTATGAGCATACAGTCCTCGTGAGTGGACTTGTCATTCTGCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204718.3 ENSMUST00000214662.2 |
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| CDS CCA 72 bp | ATCAGTGTGAAGAGGAAAGTGTCCATGTGTCCATCCTaGAAAAGGCCAACCAAGCTGAAGTCTGTCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: ISVKRKVSMCPS*KRPTKLKSVPQ Trigger: CTGTGGGACAGACTTCAGCTTGGTTGGCCTTTTCCAGGATGGACACATGGACACTTTCCTCTTCACACTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204718.3 ENSMUST00000214662.2 |
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| CDS GCA 72 bp | GAGGAGGACCAGTGTGATGTTGCCTATGAAAGCCACTaGAAAGAGGATGGCAATCAGTGTGAAGAGGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: EEDQCDVAYESH*KEDGNQCEEES Trigger: ACTTTCCTCTTCACACTGATTGCCATCCTCTTTGCAGTGGCTTTCATAGGCAACATCACACTGGTCCTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204718.3 ENSMUST00000214662.2 |
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| CDS CCA 72 bp | CACTACTTTGTCCCTTCCAGGAGAATGCAAGGAGTGTaGCTGGGTATATGTGGAGAGTCCAGTAACATAGAA | + |
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Preference number: 6 (lower is better) Translates to: HYFVPSRRMQGV*LGICGESSNIE Trigger: TTCTATGTTACTGGACTCTCCACATATACCCAGCCACACTCCTTGCATTCTCCTGGAAGGGACAAAGTAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204718.3 ENSMUST00000214662.2 |
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