Pregenerated sensors for OLFR32 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075066Ensembl transcript IDs: ENSMUST00000099755.5, ENSMUST00000213293.2, ENSMUST00000214973.2, ENSMUST00000215153.3, ENSMUST00000215659.2, ENSMUST00000215765.2
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATGATGATAGAAATTGGAGCAGCAGCTGATGTTGGGTGTGGAGGAAGCTGTGTGCACACATGTGGAGAGTaGAGGACAAGCTGCTCATTC | + |
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Preference number: 2 (lower is better) Translates to: MMIEIGAAADVGCGGSCVHTCGE*RTSCSF Trigger: GAATGAGCAGCTTGTCCTTCACTCTCCACATGTGTG...CACACAGCTTCCTCCACACCCAACATCAGCTGCTGCTCCAATTTCTATCATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCACCCATCTTAGGACATGAGGTAAACACAAAAATGAAAGGCCTTGGTGATCACACATGTGGAGAGTaGAGGACAAGCTGCTCATTC | + |
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Preference number: 2 (lower is better) Translates to: PAPILGHEVNTKMKGLGDHTCGE*RTSCSF Trigger: GAATGAGCAGCTTGTCCTTCACTCTCCACATGTGTG...ATCACCAAGGCCTTTCATTTTTGTGTTTACCTCATGTCCTAAGATGGGTGCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR-3UTR TCA 90 bp | GAATACATGTGTAGAATCAGGGAAGGAGTCCTGGGACTTCCTCCAAAATTGCAAGTAGGGTTCATTTTGTaGACTGGGATTCCCAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: EYMCRIREGVLGLPPKLQVGFIL*TGIPRE Trigger: TTCCCTGGGAATCCCAGTTCACAAAATGAACCCTAC...TTGCAATTTTGGAGGAAGTCCCAGGACTCCTTCCCTGATTCTACACATGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR-3UTR CCA 90 bp | ATGATGATAGAAATTGGAGCAGCAGCTGATGTTGGGTGTGGAGGAAGCTGTGTGAAAAGAACACACATGTaGAGAGTGAAGGACAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: MMIEIGAAADVGCGGSCVKRTHM*RVKDKL Trigger: CAGCTTGTCCTTCACTCTCCACATGTGTGTTCTTTT...CACACAGCTTCCTCCACACCCAACATCAGCTGCTGCTCCAATTTCTATCATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR-3UTR TCA 90 bp | ATGATGATAGAAATTGGAGCAGCAGCTGATGTTGGGTGTGGAGGAAGCTGTGTGTTATCATATGACATCTaGATCCAAGAACAGATTCCC | + |
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Preference number: 2 (lower is better) Translates to: MMIEIGAAADVGCGGSCVLSYDI*IQEQIP Trigger: GGGAATCTGTTCTTGGATTCAGATGTCATATGATAA...CACACAGCTTCCTCCACACCCAACATCAGCTGCTGCTCCAATTTCTATCATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTCATTCAATCTGGCCAGCCTAGGGAATACATGTGTAGAATCAGGGAAGGAGACATCTGAAGGAAAATaGATAAAACTAAGGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: CSFNLASLGNTCVESGKETSEGK*IKLRPQ Trigger: CTGTGGCCTTAGTTTTATTCATTTTCCTTCAGATGT...CTCCTTCCCTGATTCTACACATGTATTCCCTAGGCTGGCCAGATTGAATGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR-3UTR TCA 90 bp | ATGATGATAGAAATTGGAGCAGCAGCTGATGTTGGGTGTGGAGGAAGCTGTGTGACCCATCTTAGGACATaGGGTAAACACAAAAATGAA | + |
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Preference number: 2 (lower is better) Translates to: MMIEIGAAADVGCGGSCVTHLRT*GKHKNE Trigger: TTCATTTTTGTGTTTACCTCATGTCCTAAGATGGGT...CACACAGCTTCCTCCACACCCAACATCAGCTGCTGCTCCAATTTCTATCATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCACCCATCTTAGGACATGAGGTAAACACAAAAATGAAAGGCCTTGGTGATGTTCATTTTGTGAACTaGGATTCCCAGGGAAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: PAPILGHEVNTKMKGLGDVHFVN*DSQGKA Trigger: AGCTTTTCCCTGGGAATCCCAGTTCACAAAATGAAC...ATCACCAAGGCCTTTCATTTTTGTGTTTACCTCATGTCCTAAGATGGGTGCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR-3UTR GCA 90 bp | ATGATGATAGAAATTGGAGCAGCAGCTGATGTTGGGTGTGGAGGAAGCTGTGTGTTAGATTGTGACTATTaGATGATCTTTGGGGTATGT | + |
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Preference number: 2 (lower is better) Translates to: MMIEIGAAADVGCGGSCVLDCDY*MIFGVC Trigger: ACATACCCCAAAGATCATGCAATAGTCACAATCTAA...CACACAGCTTCCTCCACACCCAACATCAGCTGCTGCTCCAATTTCTATCATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCACCCATCTTAGGACATGAGGTAAACACAAAAATGAAAGGCCTTGGTGATTACCTTTATTTTCTATaGACCTGTTCCCACAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: PAPILGHEVNTKMKGLGDYLYFL*TCSHSE Trigger: TTCACTGTGGGAACAGGTTCATAGAAAATAAAGGTA...ATCACCAAGGCCTTTCATTTTTGTGTTTACCTCATGTCCTAAGATGGGTGCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCACCCATCTTAGGACATGAGGTAAACACAAAAATGAAAGGCCTTGGTGATACATCTGAAGGAAAATaGATAAAACTAAGGCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: PAPILGHEVNTKMKGLGDTSEGK*IKLRPQ Trigger: CTGTGGCCTTAGTTTTATTCATTTTCCTTCAGATGT...ATCACCAAGGCCTTTCATTTTTGTGTTTACCTCATGTCCTAAGATGGGTGCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCACCCATCTTAGGACATGAGGTAAACACAAAAATGAAAGGCCTTGGTGATAAATACTTTAGCTATTaGATGCCAAGATCCCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: PAPILGHEVNTKMKGLGDKYFSY*MPRSLH Trigger: GTGAAGGGATCTTGGCATCCAATAGCTAAAGTATTT...ATCACCAAGGCCTTTCATTTTTGTGTTTACCTCATGTCCTAAGATGGGTGCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR-3UTR TCA 90 bp | ATCAGGGAAGGAGTCCTGGGACTTCCTCCAAAATTGCAAGCAGACAATATAAAATACCTTTATTTTCTATaGACCTGTTCCCACAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: IREGVLGLPPKLQADNIKYLYFL*TCSHSE Trigger: TTCACTGTGGGAACAGGTTCATAGAAAATAAAGGTA...TTTTATATTGTCTGCTTGCAATTTTGGAGGAAGTCCCAGGACTCCTTCCCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR-3UTR TCA 90 bp | ATCAGGGAAGGAGTCCTGGGACTTCCTCCAAAATTGCAAGCAGACAATATAAAATTATCATATGACATCTaGATCCAAGAACAGATTCCC | + |
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Preference number: 2 (lower is better) Translates to: IREGVLGLPPKLQADNIKLSYDI*IQEQIP Trigger: GGGAATCTGTTCTTGGATTCAGATGTCATATGATAA...TTTTATATTGTCTGCTTGCAATTTTGGAGGAAGTCCCAGGACTCCTTCCCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR-3UTR GCA 90 bp | GAATACATGTGTAGAATCAGGGAAGGAGTCCTGGGACTTCCTCCAAAATTGCAATTAGATTGTGACTATTaGATGATCTTTGGGGTATGT | + |
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Preference number: 2 (lower is better) Translates to: EYMCRIREGVLGLPPKLQLDCDY*MIFGVC Trigger: ACATACCCCAAAGATCATGCAATAGTCACAATCTAA...TTGCAATTTTGGAGGAAGTCCCAGGACTCCTTCCCTGATTCTACACATGTATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR CAA 90 bp | TGTCATCACCTTGATGTCTTTATTCATTGTGTAGCTCAGTTCCTGTaGTGTGTGACTTGTCATGTAAGGTTACCTGAAAAGAACACACAT | + |
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Preference number: 2 (lower is better) Translates to: CHHLDVFIHCVAQFL*CVTCHVRLPEKNTH Trigger: ATGTGTGTTCTTTTCAGGTAACCTTACATGACAAGTCACACACAACAGGAACTGAGCTACACAATGAATAAAGACATCAAGGTGATGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR GCA 72 bp | GAGCAGCAGCTGATGTTGGGTGTGGAGGAAGCTGTGTaGGTGAAAGGACACAAGAGACGCTTTCATGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: EQQLMLGVEEAV*VKGHKRRFHVF Trigger: GAAGACATGAAAGCGTCTCTTGTGTCCTTTCACGCACACAGCTTCCTCCACACCCAACATCAGCTGCTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGCACCCATCTTAGGACATGAGGTAAACACAAAAATGAAAGGCCTTGGTGATGTAGCTCAGTTCCTGTaGTGTGTGACTTGTCATGTA | + |
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Preference number: 3 (lower is better) Translates to: PAPILGHEVNTKMKGLGDVAQFL*CVTCHV Trigger: TACATGACAAGTCACACACAACAGGAACTGAGCTAC...ATCACCAAGGCCTTTCATTTTTGTGTTTACCTCATGTCCTAAGATGGGTGCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR TCA 72 bp | CCTGTTCCCACAGTGAAACATGGTGCTTGTGTAACCTaGATCTATAGTCCCACACTTTACTCATATCAGCTC | + |
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Preference number: 3 (lower is better) Translates to: PVPTVKHGACVT*IYSPTLYSYQL Trigger: GAGCTGATATGAGTAAAGTGTGGGACTATAGATTCAGGTTACACAAGCACCATGTTTCACTGTGGGAACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR-3UTR CAA 90 bp | TGCTCATTCAATCTGGCCAGCCTAGGGAATACATGTGTAGAATCAGGGAAGGAGCATTACAGCTATCCATaGTCCACTTCTTACTTAATC | + |
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Preference number: 3 (lower is better) Translates to: CSFNLASLGNTCVESGKEHYSYP*STSYLI Trigger: GATTAAGTAAGAAGTGGACAATGGATAGCTGTAATG...CTCCTTCCCTGATTCTACACATGTATTCCCTAGGCTGGCCAGATTGAATGAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR GCA 72 bp | ATGACATCTGAATCCAAGAACAGATTCCCCCAACACTaGCCCATAACCTATCAGCCTGATATTCTTACCAAT | + |
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Preference number: 3 (lower is better) Translates to: MTSESKNRFPQH*PITYQPDILTN Trigger: ATTGGTAAGAATATCAGGCTGATAGGTTATGGGGCAGTGTTGGGGGAATCTGTTCTTGGATTCAGATGTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR-3UTR CAA 90 bp | ATCAGGGAAGGAGTCCTGGGACTTCCTCCAAAATTGCAAGCAGACAATATAAAACATTACAGCTATCCATaGTCCACTTCTTACTTAATC | + |
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Preference number: 3 (lower is better) Translates to: IREGVLGLPPKLQADNIKHYSYP*STSYLI Trigger: GATTAAGTAAGAAGTGGACAATGGATAGCTGTAATG...TTTTATATTGTCTGCTTGCAATTTTGGAGGAAGTCCCAGGACTCCTTCCCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR CCA 72 bp | GTGAAAGGACACAAGAGACGCTTTCATGTCTTCCAATaGATGTCAAGGAAACTGTGTGTAAACTTATCAAAA | + |
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Preference number: 3 (lower is better) Translates to: VKGHKRRFHVFQ*MSRKLCVNLSK Trigger: TTTTGATAAGTTTACACACAGTTTCCTTGACATCCATTGGAAGACATGAAAGCGTCTCTTGTGTCCTTTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| 3UTR TCA 72 bp | ATCTTCACCAACCCAAAAACTAAGAATGTTATCATATaGCATCTGAATCCAAGAACAGATTCCCCCAACACT | + |
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Preference number: 3 (lower is better) Translates to: IFTNPKTKNVII*HLNPRTDSPNT Trigger: AGTGTTGGGGGAATCTGTTCTTGGATTCAGATGTCATATGATAACATTCTTAGTTTTTGGGTTGGTGAAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| CDS-3UTR CCA 90 bp | TGCTCATTCAATCTGGCCAGCCTAGGGAATACATGTGTAGAATCAGGGAAGGAGCACCTTCTGCACATCTaGATCCTGGAAAAGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: CSFNLASLGNTCVESGKEHLLHI*ILEKAS Trigger: ACTGGCCTTTTCCAGGATCCAGATGTGCAGAAGGTG...CTCCTTCCCTGATTCTACACATGTATTCCCTAGGCTGGCCAGATTGAATGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| CDS-3UTR TCA 90 bp | GAATACATGTGTAGAATCAGGGAAGGAGTCCTGGGACTTCCTCCAAAATTGCAACAGTGCAGGCCAACTTaGATAAGGGATGGAGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: EYMCRIREGVLGLPPKLQQCRPT*IRDGGH Trigger: GTGACCTCCATCCCTTATTCAAGTTGGCCTGCACTG...TTGCAATTTTGGAGGAAGTCCCAGGACTCCTTCCCTGATTCTACACATGTATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| CDS-3UTR TCA 90 bp | TGCTCATTCAATCTGGCCAGCCTAGGGAATACATGTGTAGAATCAGGGAAGGAGACAACCACCATGATGTaGGAGGCACAGGTAGATAAA | + |
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Preference number: 4 (lower is better) Translates to: CSFNLASLGNTCVESGKETTTMM*EAQVDK Trigger: TTTATCTACCTGTGCCTCTCACATCATGGTGGTTGT...CTCCTTCCCTGATTCTACACATGTATTCCCTAGGCTGGCCAGATTGAATGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| CDS-3UTR CCA 90 bp | CCAGCACCCATCTTAGGACATGAGGTAAACACAAAAATGAAAGGCCTTGGTGATCACCTTCTGCACATCTaGATCCTGGAAAAGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: PAPILGHEVNTKMKGLGDHLLHI*ILEKAS Trigger: ACTGGCCTTTTCCAGGATCCAGATGTGCAGAAGGTG...ATCACCAAGGCCTTTCATTTTTGTGTTTACCTCATGTCCTAAGATGGGTGCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| CDS-3UTR CCA 90 bp | GAATACATGTGTAGAATCAGGGAAGGAGTCCTGGGACTTCCTCCAAAATTGCAACTCCCCTCTGCAGAATaGTTCCTCAAGTTATACAGG | + |
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Preference number: 4 (lower is better) Translates to: EYMCRIREGVLGLPPKLQLPSAE*FLKLYR Trigger: CCTGTATAACTTGAGGAACCATTCTGCAGAGGGGAG...TTGCAATTTTGGAGGAAGTCCCAGGACTCCTTCCCTGATTCTACACATGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| CDS-3UTR CCA 90 bp | GAATACATGTGTAGAATCAGGGAAGGAGTCCTGGGACTTCCTCCAAAATTGCAATGTCTTCAGTGTAGGTaGAGGCAGGTCTCAAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: EYMCRIREGVLGLPPKLQCLQCR*RQVSSR Trigger: TCTACTTGAGACCTGCCTCCACCTACACTGAAGACA...TTGCAATTTTGGAGGAAGTCCCAGGACTCCTTCCCTGATTCTACACATGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| CDS-3UTR TCA 90 bp | GAATACATGTGTAGAATCAGGGAAGGAGTCCTGGGACTTCCTCCAAAATTGCAAACAACCACCATGATGTaGGAGGCACAGGTAGATAAA | + |
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Preference number: 4 (lower is better) Translates to: EYMCRIREGVLGLPPKLQTTTMM*EAQVDK Trigger: TTTATCTACCTGTGCCTCTCACATCATGGTGGTTGT...TTGCAATTTTGGAGGAAGTCCCAGGACTCCTTCCCTGATTCTACACATGTATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| CDS-3UTR CCA 90 bp | ATCAGGGAAGGAGTCCTGGGACTTCCTCCAAAATTGCAAGCAGACAATATAAAACTCCCCTCTGCAGAATaGTTCCTCAAGTTATACAGG | + |
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Preference number: 4 (lower is better) Translates to: IREGVLGLPPKLQADNIKLPSAE*FLKLYR Trigger: CCTGTATAACTTGAGGAACCATTCTGCAGAGGGGAG...TTTTATATTGTCTGCTTGCAATTTTGGAGGAAGTCCCAGGACTCCTTCCCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| CDS-3UTR CAA 90 bp | CCAGCACCCATCTTAGGACATGAGGTAAACACAAAAATGAAAGGCCTTGGTGATACAACAATGAGGCCATaGCCCAACACTGTGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PAPILGHEVNTKMKGLGDTTMRP*PNTVAR Trigger: CCTGGCCACAGTGTTGGGCAATGGCCTCATTGTTGT...ATCACCAAGGCCTTTCATTTTTGTGTTTACCTCATGTCCTAAGATGGGTGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| CDS-3UTR CAA 90 bp | ATCAGGGAAGGAGTCCTGGGACTTCCTCCAAAATTGCAAGCAGACAATATAAAAACAACAATGAGGCCATaGCCCAACACTGTGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: IREGVLGLPPKLQADNIKTTMRP*PNTVAR Trigger: CCTGGCCACAGTGTTGGGCAATGGCCTCATTGTTGT...TTTTATATTGTCTGCTTGCAATTTTGGAGGAAGTCCCAGGACTCCTTCCCTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| CDS-3UTR CAA 90 bp | CCAGCACCCATCTTAGGACATGAGGTAAACACAAAAATGAAAGGCCTTGGTGATTCAGTGCAGGCCAACTaGAATAAGGGATGGAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: PAPILGHEVNTKMKGLGDSVQAN*NKGWRS Trigger: TGACCTCCATCCCTTATTCAAGTTGGCCTGCACTGA...ATCACCAAGGCCTTTCATTTTTGTGTTTACCTCATGTCCTAAGATGGGTGCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| CDS-3UTR CAA 90 bp | TGCTCATTCAATCTGGCCAGCCTAGGGAATACATGTGTAGAATCAGGGAAGGAGAGACTCTTACTGATGTaGACTGTCACAACAATGAGG | + |
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Preference number: 5 (lower is better) Translates to: CSFNLASLGNTCVESGKERLLLM*TVTTMR Trigger: CCTCATTGTTGTGACAGTCAACATCAGTAAGAGTCT...CTCCTTCCCTGATTCTACACATGTATTCCCTAGGCTGGCCAGATTGAATGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| CDS-3UTR CAA 90 bp | CCAGCACCCATCTTAGGACATGAGGTAAACACAAAAATGAAAGGCCTTGGTGATAGACTCTTACTGATGTaGACTGTCACAACAATGAGG | + |
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Preference number: 5 (lower is better) Translates to: PAPILGHEVNTKMKGLGDRLLLM*TVTTMR Trigger: CCTCATTGTTGTGACAGTCAACATCAGTAAGAGTCT...ATCACCAAGGCCTTTCATTTTTGTGTTTACCTCATGTCCTAAGATGGGTGCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215153.3 ENSMUST00000215659.2 |
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| CDS CAA 72 bp | CTCTTACTGATGTTGACTGTCACAACAATGAGGCCATaGCCCAACACTGTGGCCAGGTACACAGGAAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LLLMLTVTTMRP*PNTVARYTGRN Trigger: GTTCCTTCCTGTGTACCTGGCCACAGTGTTGGGCAATGGCCTCATTGTTGTGACAGTCAACATCAGTAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000099755.5 ENSMUST00000213293.2 ENSMUST00000214973.2 ENSMUST00000215153.3 ENSMUST00000215659.2 ENSMUST00000215765.2 |
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