Pregenerated sensors for OLFR319 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064044Ensembl transcript IDs: ENSMUST00000076965.2, ENSMUST00000215962.2
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAACATGGGAGCTCACCACAAAGTTGTTCGTGGAAAGAGACACAGTaGAAAGAGTCAGACAGATTCATTGATGATGTTTATTACAAAGTC | + |
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Preference number: 1 (lower is better) Translates to: KHGSSPQSCSWKETQ*KESDRFIDDVYYKV Trigger: GACTTTGTAATAAACATCATCAATGAATCTGTCTGACTCTTTGCACTGTGTCTCTTTCCACGAACAACTTTGTGGTGAGCTCCCATGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| 3UTR CCA 90 bp | ACAATTTGGGGTCTGTTTCTCAAATGTCCTTATCATAAGTTAGCATaGGTGATCAACATAAATATAAACATGGGAGCTCACCACAAAGTT | + |
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Preference number: 1 (lower is better) Translates to: TIWGLFLKCPYHKLA*VINININMGAHHKV Trigger: AACTTTGTGGTGAGCTCCCATGTTTATATTTATGTTGATCACCCATGCTAACTTATGATAAGGACATTTGAGAAACAGACCCCAAATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| 3UTR-3UTR GCA 90 bp | TATCATAAGTTAGCATGGGTGATCAACATAAATATAAACATGGGAGCTCACCACGAAGCCGTGGTACCTTaGACCAGGGCAGATGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: YHKLAWVINININMGAHHEAVVP*TRADGK Trigger: CTTACCATCTGCCCTGGTGCAAGGTACCACGGCTTC...GTGGTGAGCTCCCATGTTTATATTTATGTTGATCACCCATGCTAACTTATGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| 3UTR-3UTR CCA 90 bp | AGTATAGCTATAATCATAAACTGCAGAAGGGGCTTCCAGAGAAAGTGGAAGGCAATGGGCAGCCAGAGATaGCAGGTACAAAGACAAAGT | + |
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Preference number: 2 (lower is better) Translates to: SIAIIINCRRGFQRKWKAMGSQR*QVQRQS Trigger: ACTTTGTCTTTGTACCTGCCATCTCTGGCTGCCCAT...TGCCTTCCACTTTCTCTGGAAGCCCCTTCTGCAGTTTATGATTATAGCTATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| 3UTR-3UTR CCA 90 bp | AACATAAATATAAACATGGGAGCTCACCACAAAGTTGTTCGTGGAAAGAGACACAGTGGAAGGCAAGTGTaGAACAGGCAACTGTATAGA | + |
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Preference number: 2 (lower is better) Translates to: NININMGAHHKVVRGKRHSGRQV*NRQLYR Trigger: TCTATACAGTTGCCTGTTCCACACTTGCCTTCCACT...GTGTCTCTTTCCACGAACAACTTTGTGGTGAGCTCCCATGTTTATATTTATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCTGTTTCTCAAATGTCCTTATCATAAGTTAGCATGGGTGATCAACATAAATCAGCCTAGGAGAGCTTaGAAATCATATTCTTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: GLFLKCPYHKLAWVININQPRRA*KSYSCG Trigger: ACCACAAGAATATGATTTCCAAGCTCTCCTAGGCTG...ATTTATGTTGATCACCCATGCTAACTTATGATAAGGACATTTGAGAAACAGACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| 3UTR CCA 72 bp | GTGGAAAGCCAATCTAGGCTGATGGGCAGCCAGAGATaGCAGGTACAAAGACAAAGTCCTTCCGTATCCCCA | + |
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Preference number: 3 (lower is better) Translates to: VESQSRLMGSQR*QVQRQSPSVSP Trigger: TGGGGATACGGAAGGACTTTGTCTTTGTACCTGCCATCTCTGGCTGCCCATCAGCCTAGATTGGCTTTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| 3UTR CCA 72 bp | AAGTGTGGAACAGGCAACTGTATAGAATGCCACAGTTaGAGAAGCCGTGGTACCTTGCACCAGGGCAGATGG | + |
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Preference number: 3 (lower is better) Translates to: KCGTGNCIECHS*RSRGTLHQGRW Trigger: CCATCTGCCCTGGTGCAAGGTACCACGGCTTCTCCAACTGTGGCATTCTATACAGTTGCCTGTTCCACACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| 3UTR CCA 72 bp | GCAGAAGGGGCTTCCAGAGAAAGTGGAAGGCAAGTGTaGAACAGGCAACTGTATAGAATGCCACAGTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: AEGASRESGRQV*NRQLYRMPQLE Trigger: CTCCAACTGTGGCATTCTATACAGTTGCCTGTTCCACACTTGCCTTCCACTTTCTCTGGAAGCCCCTTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTATCATAAGTTAGCATGGGTGATCAACATAAATATAAACATGGGAGCTCACTATAGAATGCCACAGTaGGAGAAGCCGTGGTACCTT | + |
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Preference number: 3 (lower is better) Translates to: PYHKLAWVINININMGAHYRMPQ*EKPWYL Trigger: AAGGTACCACGGCTTCTCCAACTGTGGCATTCTATA...GTGAGCTCCCATGTTTATATTTATGTTGATCACCCATGCTAACTTATGATAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| 3UTR-3UTR CAA 90 bp | ATAAATATAAACATGGGAGCTCACCACAAAGTTGTTCGTGGAAAGAGACACAGTCAAAGATTCCGGTTCTaGTTCATTCAGCAAGACAAG | + |
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Preference number: 3 (lower is better) Translates to: ININMGAHHKVVRGKRHSQRFRF*FIQQDK Trigger: CTTGTCTTGCTGAATGAACAAGAACCGGAATCTTTG...ACTGTGTCTCTTTCCACGAACAACTTTGTGGTGAGCTCCCATGTTTATATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| 3UTR-3UTR CAA 90 bp | ATAAATATAAACATGGGAGCTCACCACAAAGTTGTTCGTGGAAAGAGACACAGTAAAGCAAGCATTAAGTaGGCTCCCTCCTTATTTCTT | + |
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Preference number: 3 (lower is better) Translates to: ININMGAHHKVVRGKRHSKASIK*APSLFL Trigger: AAGAAATAAGGAGGGAGCCAACTTAATGCTTGCTTT...ACTGTGTCTCTTTCCACGAACAACTTTGTGGTGAGCTCCCATGTTTATATTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| 3UTR CCA 72 bp | GGTCTGTTTCTCAAATGTCCTTATCATAAGTTAGCATaGGTGATCAACATAAATATAAACATGGGAGCTCAC | + |
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Preference number: 3 (lower is better) Translates to: GLFLKCPYHKLA*VINININMGAH Trigger: GTGAGCTCCCATGTTTATATTTATGTTGATCACCCATGCTAACTTATGATAAGGACATTTGAGAAACAGACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| 3UTR CAA 72 bp | CAAGTGTGGAACAGGCAACTGTATAGAATGCCACAGTaGGAGAAGCCGTGGTACCTTGCACCAGGGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: QVWNRQLYRMPQ*EKPWYLAPGQM Trigger: CATCTGCCCTGGTGCAAGGTACCACGGCTTCTCCAACTGTGGCATTCTATACAGTTGCCTGTTCCACACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| CDS-3UTR GCA 90 bp | GCCGTGGTACCTTGCACCAGGGCAGATGGTAAGAAAATCAGTGGAAAGCCAATCGCTCTACTCTGTCCCTaGCCTGAACCCATCTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: AVVPCTRADGKKISGKPIALLCP*PEPIWN Trigger: ATTCCAGATGGGTTCAGGGCAGGGACAGAGTAGAGC...GATTGGCTTTCCACTGATTTTCTTACCATCTGCCCTGGTGCAAGGTACCACGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| CDS-3UTR CCA 90 bp | AAGGGGCTTCCAGAGAAAGTGGAAGGCAAGTGTGGAACAGGCAACTGTATAGAAGTCTTCACACACAAGTaGCAGGAGAGATGGAACCTC | + |
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Preference number: 4 (lower is better) Translates to: KGLPEKVEGKCGTGNCIEVFTHK*QERWNL Trigger: GAGGTTCCATCTCTCCTGCCACTTGTGTGTGAAGAC...TTCTATACAGTTGCCTGTTCCACACTTGCCTTCCACTTTCTCTGGAAGCCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| CDS-3UTR TCA 90 bp | AAGATTCCGGTTCTTGTTCATTCAGCAAGACAAGCTGATAAGCTTCCACCAGAAAAAGACCAACCAAGGTaGAGTCTGTCCCGCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KIPVLVHSARQADKLPPEKDQPR*SLSRSC Trigger: ACAGCTGCGGGACAGACTTCACCTTGGTTGGTCTTT...TTCTGGTGGAAGCTTATCAGCTTGTCTTGCTGAATGAACAAGAACCGGAATCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| CDS-3UTR TCA 90 bp | AGTATAGCTATAATCATAAACTGCAGAAGGGGCTTCCAGAGAAAGTGGAAGGCAAATGGCCTTGGTGTCTaGGATGAAGTTAGCTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: SIAIIINCRRGFQRKWKANGLGV*DEVSSH Trigger: ATGGGAGCTAACTTCATCTCAGACACCAAGGCCATT...TGCCTTCCACTTTCTCTGGAAGCCCCTTCTGCAGTTTATGATTATAGCTATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| CDS-3UTR TCA 90 bp | AACATAAATATAAACATGGGAGCTCACCACAAAGTTGTTCGTGGAAAGAGACACACTCTGTCCCTGCCCTaGACCCATCTGGAATACAAC | + |
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Preference number: 4 (lower is better) Translates to: NININMGAHHKVVRGKRHTLSLP*THLEYN Trigger: GTTGTATTCCAGATGGGTTCAGGGCAGGGACAGAGT...GTGTCTCTTTCCACGAACAACTTTGTGGTGAGCTCCCATGTTTATATTTATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| CDS-3UTR GCA 90 bp | CATAAATATAAACATGGGAGCTCACCACAAAGTTGTTCGTGGAAAGAGACACAGGCCTATGAGAGCCACTaGAAAGAGGATGGAGATGAC | + |
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Preference number: 4 (lower is better) Translates to: HKYKHGSSPQSCSWKETQAYESH*KEDGDD Trigger: GTCATCTCCATCCTCTTTGCAGTGGCTCTCATAGGC...CTGTGTCTCTTTCCACGAACAACTTTGTGGTGAGCTCCCATGTTTATATTTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| CDS-3UTR GCA 90 bp | GGTCTGTTTCTCAAATGTCCTTATCATAAGTTAGCATGGGTGATCAACATAAATTCCCTTCCAGGAGAATaGAAGGAGTGTGGCTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: GLFLKCPYHKLAWVININSLPGE*KECGWV Trigger: CACCCAGCCACACTCCTTGCATTCTCCTGGAAGGGA...ATTTATGTTGATCACCCATGCTAACTTATGATAAGGACATTTGAGAAACAGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| CDS-3UTR TCA 90 bp | AATAATCACACAAGTATCAAAGCAAGCATTAAGTTGGCTCCCTCCTTATTTCTTACCTGTCATAGGACATaGAGCCCAGCAGGAGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: NNHTSIKASIKLAPSLFLTCHRT*SPAGEL Trigger: AAGCTCTCCTGCTGGGCTTCATGTCCTATGACAGGT...AAGAAATAAGGAGGGAGCCAACTTAATGCTTGCTTTGATACTTGTGTGATTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| CDS-3UTR CCA 90 bp | AACATAAATATAAACATGGGAGCTCACCACAAAGTTGTTCGTGGAAAGAGACACTGCCCTGAACCCATCTaGAATACAACAACCAAGACC | + |
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Preference number: 4 (lower is better) Translates to: NININMGAHHKVVRGKRHCPEPI*NTTTKT Trigger: GGTCTTGGTTGTTGTATTCCAGATGGGTTCAGGGCA...GTGTCTCTTTCCACGAACAACTTTGTGGTGAGCTCCCATGTTTATATTTATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| CDS-3UTR TCA 90 bp | GTTCTTGTTCATTCAGCAAGACAAGCTGATAAGCTTCCACCAGAATATCAATCCCCACAGAAAGGAAGTTaGAACACATACACTGTATGC | + |
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Preference number: 4 (lower is better) Translates to: VLVHSARQADKLPPEYQSPQKGS*NTYTVC Trigger: GCATACAGTGTATGTGTTTCAACTTCCTTTCTGTGG...GGATTGATATTCTGGTGGAAGCTTATCAGCTTGTCTTGCTGAATGAACAAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| CDS-3UTR CCA 90 bp | AACATAAATATAAACATGGGAGCTCACCACAAAGTTGTTCGTGGAAAGAGACACACCTCACAGAAAAAGTaGTTAACCATCCTAGACCCA | + |
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Preference number: 4 (lower is better) Translates to: NININMGAHHKVVRGKRHTSQKK*LTILDP Trigger: TGGGTCTAGGATGGTTAACCACTTTTTCTGTGAGGT...GTGTCTCTTTCCACGAACAACTTTGTGGTGAGCTCCCATGTTTATATTTATGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| CDS CCA 90 bp | GAGCACAGCCACCACTTTGTCCCTTCCAGGAGAATGCAAGGAGTGTaGCTGGGTGTAGGTGCAGAGACCGGTGACATAGAACAGACTGGC | + |
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Preference number: 5 (lower is better) Translates to: EHSHHFVPSRRMQGV*LGVGAETGDIEQTG Trigger: GCCAGTCTGTTCTATGTCACCGGTCTCTGCACCTACACCCAGCCACACTCCTTGCATTCTCCTGGAAGGGACAAAGTGGTGGCTGTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076965.2 ENSMUST00000215962.2 |
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| CDS TCA 90 bp | CACAGAAAGGAAGTTGAAACACATACACTGTATGCGCTAAAGCATTaGTGGAGCTGCTGCTCCAGGCACTGGCGACCATGGAGCAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: HRKEVETHTLYALKH*WSCCSRHWRPWSSR Trigger: TCTGCTGCTCCATGGTCGCCAGTGCCTGGAGCAGCAGCTCCATCAATGCTTTAGCGCATACAGTGTATGTGTTTCAACTTCCTTTCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076965.2 ENSMUST00000215962.2 |
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| CDS CCA 90 bp | AGGATGGAGATGACTGTGAAGAGGAAGGTGTCCATGTGTCCATACTaGAAAAGACCAACCAAGGTGAAGTCTGTCCCGCAGCTGTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: RMEMTVKRKVSMCPY*KRPTKVKSVPQLWF Trigger: AAACCACAGCTGCGGGACAGACTTCACCTTGGTTGGTCTTTTCCAGTATGGACACATGGACACCTTCCTCTTCACAGTCATCTCCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076965.2 ENSMUST00000215962.2 |
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| CDS-3UTR CAA 90 bp | ATAATCATAAACTGCAGAAGGGGCTTCCAGAGAAAGTGGAAGGCAAGTGTGGAAAGCACAGCCACCACTTaGTCCCTTCCAGGAGAATGC | + |
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Preference number: 5 (lower is better) Translates to: IIINCRRGFQRKWKASVESTATT*SLPGEC Trigger: GCATTCTCCTGGAAGGGACAAAGTGGTGGCTGTGCT...TTCCACACTTGCCTTCCACTTTCTCTGGAAGCCCCTTCTGCAGTTTATGATTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| CDS-3UTR CAA 90 bp | TTGGAGAAGCCGTGGTACCTTGCACCAGGGCAGATGGTAAGAAAATCAGTGGAAAAAACGGAAATGGCCTaGGTGTCTGAGATGAAGTTA | + |
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Preference number: 5 (lower is better) Translates to: LEKPWYLAPGQMVRKSVEKTEMA*VSEMKL Trigger: TAACTTCATCTCAGACACCAAGGCCATTTCCGTTTT...TTCCACTGATTTTCTTACCATCTGCCCTGGTGCAAGGTACCACGGCTTCTCCAA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| CDS CCA 90 bp | AGCAGGAGAGCTTCACACCCAGCAAGACTCATAAACATAAAGACTTaGATCTCACATCCTAAAACGGAAATGGCCTTGGTGTCTGAGATG | + |
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Preference number: 5 (lower is better) Translates to: SRRASHPARLINIKT*ISHPKTEMALVSEM Trigger: CATCTCAGACACCAAGGCCATTTCCGTTTTAGGATGTGAGATCCAAGTCTTTATGTTTATGAGTCTTGCTGGGTGTGAAGCTCTCCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076965.2 ENSMUST00000215962.2 |
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| CDS-3UTR CAA 90 bp | CCTTATCATAAGTTAGCATGGGTGATCAACATAAATATAAACATGGGAGCTCACAAGTTAGCTCCCATCTaGGGCACAGTGGTAGATATG | + |
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Preference number: 5 (lower is better) Translates to: PYHKLAWVINININMGAHKLAPI*GTVVDM Trigger: CATATCTACCACTGTGCCCAAGATGGGAGCTAACTT...GTGAGCTCCCATGTTTATATTTATGTTGATCACCCATGCTAACTTATGATAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215962.2 |
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| CDS GCA 72 bp | TGTGAGGAGCAGGTGGACACAGCTCTACTCTGTCCCTaGCCTGAACCCATCTGGAATACAACAACCAAGACC | + |
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Preference number: 6 (lower is better) Translates to: CEEQVDTALLCP*PEPIWNTTTKT Trigger: GGTCTTGGTTGTTGTATTCCAGATGGGTTCAGGGCAGGGACAGAGTAGAGCTGTGTCCACCTGCTCCTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076965.2 ENSMUST00000215962.2 |
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| CDS CCA 72 bp | CACCACTTTGTCCCTTCCAGGAGAATGCAAGGAGTGTaGCTGGGTGTAGGTGCAGAGACCGGTGACATAGAA | + |
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Preference number: 6 (lower is better) Translates to: HHFVPSRRMQGV*LGVGAETGDIE Trigger: TTCTATGTCACCGGTCTCTGCACCTACACCCAGCCACACTCCTTGCATTCTCCTGGAAGGGACAAAGTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076965.2 ENSMUST00000215962.2 |
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| CDS CAA 90 bp | GTGTGGAGTCTTCTATCCAGCCTGATGAGGAGGACCAGTGTGATGTaGCCTATGAGAGCCACTGCAAAGAGGATGGAGATGACTGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: VWSLLSSLMRRTSVM*PMRATAKRMEMTVK Trigger: CTTCACAGTCATCTCCATCCTCTTTGCAGTGGCTCTCATAGGCAACATCACACTGGTCCTCCTCATCAGGCTGGATAGAAGACTCCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076965.2 ENSMUST00000215962.2 |
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| CDS TCA 72 bp | TGTCCATGTGTCCATACTGGAAAAGACCAACCAAGGTaGAGTCTGTCCCGCAGCTGTGGTTTCCTGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: CPCVHTGKDQPR*SLSRSCGFLSP Trigger: TGGAGACAGGAAACCACAGCTGCGGGACAGACTTCACCTTGGTTGGTCTTTTCCAGTATGGACACATGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076965.2 ENSMUST00000215962.2 |
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| CDS GCA 72 bp | GAGGAGGACCAGTGTGATGTTGCCTATGAGAGCCACTaGAAAGAGGATGGAGATGACTGTGAAGAGGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: EEDQCDVAYESH*KEDGDDCEEEG Trigger: ACCTTCCTCTTCACAGTCATCTCCATCCTCTTTGCAGTGGCTCTCATAGGCAACATCACACTGGTCCTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076965.2 ENSMUST00000215962.2 |
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| CDS CCA 72 bp | ATGACTGTGAAGAGGAAGGTGTCCATGTGTCCATACTaGAAAAGACCAACCAAGGTGAAGTCTGTCCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: MTVKRKVSMCPY*KRPTKVKSVPQ Trigger: CTGCGGGACAGACTTCACCTTGGTTGGTCTTTTCCAGTATGGACACATGGACACCTTCCTCTTCACAGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076965.2 ENSMUST00000215962.2 |
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| CDS CAA 90 bp | GAGCAACACAAGGACAAGGACACTCATGACAATCATATGCTCATATaGGGATGTGTCTTCACACACAAGTGGCAGGAGAGATGGAACCTC | + |
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Preference number: 6 (lower is better) Translates to: EQHKDKDTHDNHMLI*GCVFTHKWQERWNL Trigger: GAGGTTCCATCTCTCCTGCCACTTGTGTGTGAAGACACATCCCAATATGAGCATATGATTGTCATGAGTGTCCTTGTCCTTGTGTTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076965.2 ENSMUST00000215962.2 |
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| CDS GCA 72 bp | AGCAACACAAGGACAAGGACACTCATGACAATCATATaGTCATATTGGGATGTGTCTTCACACACAAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: SNTRTRTLMTII*SYWDVSSHTSG Trigger: GCCACTTGTGTGTGAAGACACATCCCAATATGAGCATATGATTGTCATGAGTGTCCTTGTCCTTGTGTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076965.2 ENSMUST00000215962.2 |
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| CDS CCA 72 bp | AGGACAAGGACACTCATGACAATCATATGCTCATATTaGGATGTGTCTTCACACACAAGTGGCAGGAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: RTRTLMTIICSY*DVSSHTSGRRD Trigger: ATCTCTCCTGCCACTTGTGTGTGAAGACACATCCCAATATGAGCATATGATTGTCATGAGTGTCCTTGTCCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076965.2 ENSMUST00000215962.2 |
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| CDS CAA 72 bp | AAGGACAAGGACACTCATGACAATCATATGCTCATATaGGGATGTGTCTTCACACACAAGTGGCAGGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: KDKDTHDNHMLI*GCVFTHKWQER Trigger: TCTCTCCTGCCACTTGTGTGTGAAGACACATCCCAATATGAGCATATGATTGTCATGAGTGTCCTTGTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076965.2 ENSMUST00000215962.2 |
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| CDS TCA 72 bp | AAGTGGTTAACCATCCTAGACCCACAGAAAGGAAGTTaGAACACATACACTGTATGCGCTAAAGCATTGATG | + |
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Preference number: 6 (lower is better) Translates to: KWLTILDPQKGS*NTYTVCAKALM Trigger: CATCAATGCTTTAGCGCATACAGTGTATGTGTTTCAACTTCCTTTCTGTGGGTCTAGGATGGTTAACCACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076965.2 ENSMUST00000215962.2 |
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