Pregenerated sensors for OLFR317 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060030Ensembl transcript IDs: ENSMUST00000075607.5, ENSMUST00000215513.2, ENSMUST00000216196.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAGAAGGCATGGCCAGCCGAGGGGCTTCTCACCTCAGGGCAGCCTaGAAACTGCAGGGAGATGTGGCTGCCTGCTTGTTTCTTCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: QEGMASRGASHLRAA*KLQGDVAACLFLLS Trigger: AGACAGAAGAAACAAGCAGGCAGCCACATCTCCCTGCAGTTTCCAGGCTGCCCTGAGGTGAGAAGCCCCTCGGCTGGCCATGCCTTCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR GCA 90 bp | GCATGGCCAGCCGAGGGGCTTCTCACCTCAGGGCAGCCTGGAAACTaGAGGGAGATGTGGCTGCCTGCTTGTTTCTTCTGTCTTAGTCTT | + |
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Preference number: 1 (lower is better) Translates to: AWPAEGLLTSGQPGN*REMWLPACFFCLSL Trigger: AAGACTAAGACAGAAGAAACAAGCAGGCAGCCACATCTCCCTGCAGTTTCCAGGCTGCCCTGAGGTGAGAAGCCCCTCGGCTGGCCATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR GCA 90 bp | GGCTTCTCACCTCAGGGCAGCCTGGAAACTGCAGGGAGATGTGGCTaGCTGCTTGTTTCTTCTGTCTTAGTCTTGTTAACCGTCTGGGGC | + |
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Preference number: 1 (lower is better) Translates to: GFSPQGSLETAGRCG*LLVSSVLVLLTVWG Trigger: GCCCCAGACGGTTAACAAGACTAAGACAGAAGAAACAAGCAGGCAGCCACATCTCCCTGCAGTTTCCAGGCTGCCCTGAGGTGAGAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR TCA 90 bp | AGATCAGATGCAGTACTGCAGTGCTACCCAAGCCCTCATGTGGAGTaGCATCCAGACCAGGGATGCCTGCCCTCCATAGCCCTGATATCA | + |
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Preference number: 1 (lower is better) Translates to: RSDAVLQCYPSPHVE*HPDQGCLPSIALIS Trigger: TGATATCAGGGCTATGGAGGGCAGGCATCCCTGGTCTGGATGTCACTCCACATGAGGGCTTGGGTAGCACTGCAGTACTGCATCTGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR CCA 90 bp | GAGGGGCTTCTCACCTCAGGGCAGCCTGGAAACTGCAGGGAGATGTaGCTGCCTGCTTGTTTCTTCTGTCTTAGTCTTGTTAACCGTCTG | + |
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Preference number: 1 (lower is better) Translates to: EGLLTSGQPGNCREM*LPACFFCLSLVNRL Trigger: CAGACGGTTAACAAGACTAAGACAGAAGAAACAAGCAGGCAGCCACATCTCCCTGCAGTTTCCAGGCTGCCCTGAGGTGAGAAGCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR CCA 90 bp | GTCTTAGTCTTGTTAACCGTCTGGGGCACAGAGACACACTCAGGGTaGGTCTTCCTCCTCAGTTCGTGCTCTACAAACGCCCTCTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: VLVLLTVWGTETHSG*VFLLSSCSTNALSE Trigger: TTCAGAGAGGGCGTTTGTAGAGCACGAACTGAGGAGGAAGACCCACCCTGAGTGTGTCTCTGTGCCCCAGACGGTTAACAAGACTAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR CCA 90 bp | TGTGGCTGCCTGCTTGTTTCTTCTGTCTTAGTCTTGTTAACCGTCTaGGGCACAGAGACACACTCAGGGTGGGTCTTCCTCCTCAGTTCG | + |
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Preference number: 1 (lower is better) Translates to: CGCLLVSSVLVLLTV*GTETHSGWVFLLSS Trigger: CGAACTGAGGAGGAAGACCCACCCTGAGTGTGTCTCTGTGCCCCAGACGGTTAACAAGACTAAGACAGAAGAAACAAGCAGGCAGCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGTGCTACCCAAGCCCTCATGTGGAGTGACATCCAGACCAGGGATGCCTGCCTCAAAGGGACTTATGTaGGGACATGGGGACAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: AVLPKPSCGVTSRPGMPASKGLM*GHGDKR Trigger: TCTCTTGTCCCCATGTCCCCACATAAGTCCCTTTGA...GGCAGGCATCCCTGGTCTGGATGTCACTCCACATGAGGGCTTGGGTAGCACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR-3UTR GCA 90 bp | CACTTTGAGGTGCCCTTGGTCTCCTGGTTTCTAAAACTAGTCATGCTGACAAGGCATCCAGACCAGGGATaGCTGCCCTCCATAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: HFEVPLVSWFLKLVMLTRHPDQG*LPSIAL Trigger: CAGGGCTATGGAGGGCAGGCATCCCTGGTCTGGATG...CCTTGTCAGCATGACTAGTTTTAGAAACCAGGAGACCAAGGGCACCTCAAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR-3UTR CCA 90 bp | CGTGCTCTACAAACGCCCTCTCTGAACCACTTTGAGGTGCCCTTGGTCTCCTGGACTTATGTGGGGACATaGGGACAAGAGAGCATGATG | + |
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Preference number: 2 (lower is better) Translates to: RALQTPSLNHFEVPLVSWTYVGT*GQESMM Trigger: CATCATGCTCTCTTGTCCCCATGTCCCCACATAAGT...CCAGGAGACCAAGGGCACCTCAAAGTGGTTCAGAGAGGGCGTTTGTAGAGCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR-3UTR CCA 90 bp | TCACTAAGCTTTGATGAAGAAGTAACGCCCAGAGGCTCAGGGGTTCTGATGGTTAACTGCAGGGAGATGTaGCTGCCTGCTTGTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SLSFDEEVTPRGSGVLMVNCREM*LPACFF Trigger: GAAGAAACAAGCAGGCAGCCACATCTCCCTGCAGTT...AACCATCAGAACCCCTGAGCCTCTGGGCGTTACTTCTTCATCAAAGCTTAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGCTGTTCCATTTGTTAGCTTTGCTGTAACATCAGTTACTGCTTCATTACTGCATCCAGACCAGGGATaGCTGCCCTCCATAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: LAVPFVSFAVTSVTASLLHPDQG*LPSIAL Trigger: CAGGGCTATGGAGGGCAGGCATCCCTGGTCTGGATG...CAGTAATGAAGCAGTAACTGATGTTACAGCAAAGCTAACAAATGGAACAGCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGAGGTGCCCTTGGTCTCCTGGTTTCTAAAACTAGTCATGCTGACAAGGGAGCACACACCATCTTCATaGCTACCAAATCTCAGAACC | + |
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Preference number: 2 (lower is better) Translates to: FEVPLVSWFLKLVMLTREHTPSS*LPNLRT Trigger: GGTTCTGAGATTTGGTAGTCATGAAGATGGTGTGTG...CTCCCTTGTCAGCATGACTAGTTTTAGAAACCAGGAGACCAAGGGCACCTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTCCACTAATGTCCCTAATGTAAAAAGTGCACAGAAGGCAACTGTTGTCGCCCACACACCATCTTCATaGCTACCAAATCTCAGAACC | + |
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Preference number: 2 (lower is better) Translates to: LSTNVPNVKSAQKATVVAHTPSS*LPNLRT Trigger: GGTTCTGAGATTTGGTAGTCATGAAGATGGTGTGTG...GGCGACAACAGTTGCCTTCTGTGCACTTTTTACATTAGGGACATTAGTGGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCACATAGTTTGGGACCTTACACAGGATTATAGAAACTCCAGAGGACGCAGAACTTATGTGGGGACATaGGGACAAGAGAGCATGATG | + |
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Preference number: 2 (lower is better) Translates to: KHIVWDLTQDYRNSRGRRTYVGT*GQESMM Trigger: CATCATGCTCTCTTGTCCCCATGTCCCCACATAAGT...TCTGCGTCCTCTGGAGTTTCTATAATCCTGTGTAAGGTCCCAAACTATGTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGTTTCTTCTGTCTTAGTCTTGTTAACCGTCTGGGGCACAGAGACACACTCAGAAAATACTCTTTATTaGTTGGTGGCTCATCATGGG | + |
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Preference number: 2 (lower is better) Translates to: LVSSVLVLLTVWGTETHSENTLY*LVAHHG Trigger: CCCATGATGAGCCACCAATCAATAAAGAGTATTTTC...TGAGTGTGTCTCTGTGCCCCAGACGGTTAACAAGACTAAGACAGAAGAAACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAAGCACATAGTTTGGGACCTTACACAGGATTATAGAAACTCCAGAGGACGCAATCTCAGAACCCTTTaGAAATCCAGTAACGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: TKHIVWDLTQDYRNSRGRNLRTL*KSSNVP Trigger: AGGCACGTTACTGGATTTGCAAAGGGTTCTGAGATT...GCGTCCTCTGGAGTTTCTATAATCCTGTGTAAGGTCCCAAACTATGTGCTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGTTTCTTCTGTCTTAGTCTTGTTAACCGTCTGGGGCACAGAGACACACTCAACAAAGCACATAGTTTaGGACCTTACACAGGATTAT | + |
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Preference number: 2 (lower is better) Translates to: LVSSVLVLLTVWGTETHSTKHIV*DLTQDY Trigger: ATAATCCTGTGTAAGGTCCCAAACTATGTGCTTTGT...TGAGTGTGTCTCTGTGCCCCAGACGGTTAACAAGACTAAGACAGAAGAAACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR CCA 72 bp | ATGGCCAGCCGAGGGGCTTCTCACCTCAGGGCAGCCTaGAAACTGCAGGGAGATGTGGCTGCCTGCTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: MASRGASHLRAA*KLQGDVAACLF Trigger: AAACAAGCAGGCAGCCACATCTCCCTGCAGTTTCCAGGCTGCCCTGAGGTGAGAAGCCCCTCGGCTGGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR TCA 72 bp | GCAGTACTGCAGTGCTACCCAAGCCCTCATGTGGAGTaGCATCCAGACCAGGGATGCCTGCCCTCCATAGCC | + |
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Preference number: 3 (lower is better) Translates to: AVLQCYPSPHVE*HPDQGCLPSIA Trigger: GGCTATGGAGGGCAGGCATCCCTGGTCTGGATGTCACTCCACATGAGGGCTTGGGTAGCACTGCAGTACTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR CCA 72 bp | TTGTTAACCGTCTGGGGCACAGAGACACACTCAGGGTaGGTCTTCCTCCTCAGTTCGTGCTCTACAAACGCC | + |
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Preference number: 3 (lower is better) Translates to: LLTVWGTETHSG*VFLLSSCSTNA Trigger: GGCGTTTGTAGAGCACGAACTGAGGAGGAAGACCCACCCTGAGTGTGTCTCTGTGCCCCAGACGGTTAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR TCA 72 bp | CTTCCTCCTCAGTTCGTGCTCTACAAACGCCCTCTCTaGACCACTTTGAGGTGCCCTTGGTCTCCTGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: LPPQFVLYKRPL*TTLRCPWSPGF Trigger: GAAACCAGGAGACCAAGGGCACCTCAAAGTGGTTCAGAGAGGGCGTTTGTAGAGCACGAACTGAGGAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR CCA 72 bp | CCCTCTCTGAACCACTTTGAGGTGCCCTTGGTCTCCTaGTTTCTAAAACTAGTCATGCTGACAAGGGAGATG | + |
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Preference number: 3 (lower is better) Translates to: PSLNHFEVPLVS*FLKLVMLTREM Trigger: CATCTCCCTTGTCAGCATGACTAGTTTTAGAAACCAGGAGACCAAGGGCACCTCAAAGTGGTTCAGAGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR TCA 72 bp | AGTTCGTGCTCTACAAACGCCCTCTCTGAACCACTTTaGGGTGCCCTTGGTCTCCTGGTTTCTAAAACTAGT | + |
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Preference number: 3 (lower is better) Translates to: SSCSTNALSEPL*GALGLLVSKTS Trigger: ACTAGTTTTAGAAACCAGGAGACCAAGGGCACCTCAAAGTGGTTCAGAGAGGGCGTTTGTAGAGCACGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR TCA 72 bp | AAGTTGTGTCCTACCTGGGACCAGGTTACACGCTGGTaGGAACTTACCCTTGCTGTTCCATTTGTTAGCTTT | + |
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Preference number: 3 (lower is better) Translates to: KLCPTWDQVTRW*ELTLAVPFVSF Trigger: AAAGCTAACAAATGGAACAGCAAGGGTAAGTTCTCACCAGCGTGTAACCTGGTCCCAGGTAGGACACAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS-3UTR TCA 90 bp | GGCACAGAGACACACTCAGGGTGGGTCTTCCTCCTCAGTTCGTGCTCTACAAACGCCTGGACACCAGGATaGTGGTGCTGTTGCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GTETHSGWVFLLSSCSTNAWTPG*WCCCPA Trigger: TGCTGGGCAACAGCACCATCATCCTGGTGTCCAGGC...GTTTGTAGAGCACGAACTGAGGAGGAAGACCCACCCTGAGTGTGTCTCTGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS-3UTR CCA 90 bp | GCCCAGAGGCTCAGGGGTTCTGATGGTTCTGATGGTTCTGTCCATCTTGTCAAGAACTTGCCCTGGTCCTaGGAGGAGCTGTTCCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: AQRLRGSDGSDGSVHLVKNLPWS*EELFPG Trigger: GCCGGGGAACAGCTCCTCCCAGGACCAGGGCAAGTT...CTTGACAAGATGGACAGAACCATCAGAACCATCAGAACCCCTGAGCCTCTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS-3UTR CCA 90 bp | TTTGAGGTGCCCTTGGTCTCCTGGTTTCTAAAACTAGTCATGCTGACAAGGGAGAACTTGCCCTGGTCCTaGGAGGAGCTGTTCCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: FEVPLVSWFLKLVMLTRENLPWS*EELFPG Trigger: GCCGGGGAACAGCTCCTCCCAGGACCAGGGCAAGTT...CTCCCTTGTCAGCATGACTAGTTTTAGAAACCAGGAGACCAAGGGCACCTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS-3UTR TCA 90 bp | TGCCCCCTTTCTTTCTCATTAGATGTTAGCCTGAGAGCCTGCAAAGTTCTCTCAGCCTGGACACCAGGATaGTGGTGCTGTTGCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: CPLSFSLDVSLRACKVLSAWTPG*WCCCPA Trigger: TGCTGGGCAACAGCACCATCATCCTGGTGTCCAGGC...TGAGAGAACTTTGCAGGCTCTCAGGCTAACATCTAATGAGAAAGAAAGGGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075607.5 ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS-3UTR CCA 90 bp | TCATTAGATGTTAGCCTGAGAGCCTGCAAAGTTCTCTCAGTATTCAGTGCCATCAACTTGCCCTGGTCCTaGGAGGAGCTGTTCCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: SLDVSLRACKVLSVFSAINLPWS*EELFPG Trigger: GCCGGGGAACAGCTCCTCCCAGGACCAGGGCAAGTT...GATGGCACTGAATACTGAGAGAACTTTGCAGGCTCTCAGGCTAACATCTAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075607.5 ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS-3UTR CCA 90 bp | CTCTGCCCCCTTTCTTTCTCATTAGATGTTAGCCTGAGAGCCTGCAAAGTTCTCGTGAGGAACTTGCCCTaGTCCTGGGAGGAGCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: LCPLSFSLDVSLRACKVLVRNLP*SWEELF Trigger: GAACAGCTCCTCCCAGGACCAGGGCAAGTTCCTCAC...GAGAACTTTGCAGGCTCTCAGGCTAACATCTAATGAGAAAGAAAGGGGGCAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075607.5 ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS-3UTR TCA 90 bp | AGCTACCCACAGTCACTCTCCACTAATGTCCCTAATGTAAAAAGTGCACAGAAGGCCTGGACACCAGGATaGTGGTGCTGTTGCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SYPQSLSTNVPNVKSAQKAWTPG*WCCCPA Trigger: TGCTGGGCAACAGCACCATCATCCTGGTGTCCAGGC...CTTCTGTGCACTTTTTACATTAGGGACATTAGTGGAGAGTGACTGTGGGTAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR CAA 72 bp | AGATGTGGCTGCCTGCTTGTTTCTTCTGTCTTAGTCTaGTTAACCGTCTGGGGCACAGAGACACACTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RCGCLLVSSVLV*LTVWGTETHSG Trigger: CCCTGAGTGTGTCTCTGTGCCCCAGACGGTTAACAAGACTAAGACAGAAGAAACAAGCAGGCAGCCACATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS-3UTR TCA 90 bp | TCATTAGATGTTAGCCTGAGAGCCTGCAAAGTTCTCTCAGTATTCAGTGCCATCATCTCGCAGAGGAAGTaGTCCACCCTGTGGTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SLDVSLRACKVLSVFSAIISQRK*STLWCP Trigger: TGGGCACCACAGGGTGGATCACTTCCTCTGCGAGAT...GATGGCACTGAATACTGAGAGAACTTTGCAGGCTCTCAGGCTAACATCTAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075607.5 ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS-3UTR TCA 90 bp | TTTCTCTGCCCCCTTTCTTTCTCATTAGATGTTAGCCTGAGAGCCTGCAAAGTTAAAGCGAGACCACGGTaGGGTGCGAGCCACACGTAT | + |
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Preference number: 4 (lower is better) Translates to: FLCPLSFSLDVSLRACKVKARPR*GASHTY Trigger: ATACGTGTGGCTCGCACCTCACCGTGGTCTCGCTTT...AACTTTGCAGGCTCTCAGGCTAACATCTAATGAGAAAGAAAGGGGGCAGAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075607.5 ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS-3UTR TCA 90 bp | GGGAAACAGGTAATGTTCAGGTCATTCACAAAGCACATAGTTTGGGACCTTACAAAAGCGAGACCACGGTaGGGTGCGAGCCACACGTAT | + |
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Preference number: 4 (lower is better) Translates to: GKQVMFRSFTKHIVWDLTKARPR*GASHTY Trigger: ATACGTGTGGCTCGCACCTCACCGTGGTCTCGCTTT...TGTAAGGTCCCAAACTATGTGCTTTGTGAATGACCTGAACATTACCTGTTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS-3UTR CCA 90 bp | TGGCTGCCTGCTTGTTTCTTCTGTCTTAGTCTTGTTAACCGTCTGGGGCACAGACCAGTAAGGATGAAATaGCTGAAGGTGCTGTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: WLPACFFCLSLVNRLGHRPVRMK*LKVLSL Trigger: CAACGACAGCACCTTCAGCCATTTCATCCTTACTGG...TCTGTGCCCCAGACGGTTAACAAGACTAAGACAGAAGAAACAAGCAGGCAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS-3UTR CCA 90 bp | GGGAAACAGGTAATGTTCAGGTCATTCACAAAGCACATAGTTTGGGACCTTACAGTGAGGAACTTGCCCTaGTCCTGGGAGGAGCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: GKQVMFRSFTKHIVWDLTVRNLP*SWEELF Trigger: GAACAGCTCCTCCCAGGACCAGGGCAAGTTCCTCAC...TGTAAGGTCCCAAACTATGTGCTTTGTGAATGACCTGAACATTACCTGTTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| 3UTR CAA 72 bp | CTACAAACGCCCTCTCTGAACCACTTTGAGGTGCCCTaGGTCTCCTGGTTTCTAAAACTAGTCATGCTGACA | + |
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Preference number: 4 (lower is better) Translates to: LQTPSLNHFEVP*VSWFLKLVMLT Trigger: TGTCAGCATGACTAGTTTTAGAAACCAGGAGACCAAGGGCACCTCAAAGTGGTTCAGAGAGGGCGTTTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS-3UTR TCA 90 bp | TCTTTCTCATTAGATGTTAGCCTGAGAGCCTGCAAAGTTCTCTCAGTATTCAGTATCTCGCAGAGGAAGTaGTCCACCCTGTGGTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SFSLDVSLRACKVLSVFSISQRK*STLWCP Trigger: TGGGCACCACAGGGTGGATCACTTCCTCTGCGAGAT...ACTGAATACTGAGAGAACTTTGCAGGCTCTCAGGCTAACATCTAATGAGAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075607.5 ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS-3UTR CCA 90 bp | CTCTGCCCCCTTTCTTTCTCATTAGATGTTAGCCTGAGAGCCTGCAAAGTTCTCGTTATAGAGCAGCTGTaGGATGGAGCTACTGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: LCPLSFSLDVSLRACKVLVIEQL*DGATGE Trigger: TTCACCAGTAGCTCCATCCCACAGCTGCTCTATAAC...GAGAACTTTGCAGGCTCTCAGGCTAACATCTAATGAGAAAGAAAGGGGGCAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075607.5 ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS-3UTR CCA 90 bp | CTTGCTGTTCCATTTGTTAGCTTTGCTGTAACATCAGTTACTGCTTCATTACTGGTGAGGAACTTGCCCTaGTCCTGGGAGGAGCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: LAVPFVSFAVTSVTASLLVRNLP*SWEELF Trigger: GAACAGCTCCTCCCAGGACCAGGGCAAGTTCCTCAC...CAGTAATGAAGCAGTAACTGATGTTACAGCAAAGCTAACAAATGGAACAGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS-3UTR CCA 90 bp | ACAAAGCACATAGTTTGGGACCTTACACAGGATTATAGAAACTCCAGAGGACGCCCAGTAAGGATGAAATaGCTGAAGGTGCTGTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: TKHIVWDLTQDYRNSRGRPVRMK*LKVLSL Trigger: CAACGACAGCACCTTCAGCCATTTCATCCTTACTGG...GCGTCCTCTGGAGTTTCTATAATCCTGTGTAAGGTCCCAAACTATGTGCTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCTGCCCCCTTTCTTTCTCATTAGATGTTAGCCTGAGAGCCTGCAAAGTTGTTATAGAGCAGCTGTaGGATGGAGCTACTGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: FLCPLSFSLDVSLRACKVVIEQL*DGATGE Trigger: TTCACCAGTAGCTCCATCCCACAGCTGCTCTATAAC...AACTTTGCAGGCTCTCAGGCTAACATCTAATGAGAAAGAAAGGGGGCAGAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075607.5 ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS-3UTR CCA 90 bp | TCTTTCTCATTAGATGTTAGCCTGAGAGCCTGCAAAGTTCTCTCAGTATTCAGTCCAGTAAGGATGAAATaGCTGAAGGTGCTGTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: SFSLDVSLRACKVLSVFSPVRMK*LKVLSL Trigger: CAACGACAGCACCTTCAGCCATTTCATCCTTACTGG...ACTGAATACTGAGAGAACTTTGCAGGCTCTCAGGCTAACATCTAATGAGAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075607.5 ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS TCA 90 bp | GAGGTGCGAGCCACACGTATTAAATGCTTTCTGCCGTCCTGCAGCTaGGCTGATTCGCAACACCGCTCTTACAATGTAACCATAGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: EVRATRIKCFLPSCS*ADSQHRSYNVTIGD Trigger: GTCTCCTATGGTTACATTGTAAGAGCGGTGTTGCGAATCAGCTCAGCTGCAGGACGGCAGAAAGCATTTAATACGTGTGGCTCGCACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075607.5 ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS CAA 90 bp | CCACAGCGGGGTAGGCTGAGAGTTGCTGGAGACATAGCCAAGGAGTaGGCCACACCGCAGCTCCAGGCCACTGAGACCAGGCCCACGCAG | + |
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Preference number: 6 (lower is better) Translates to: PQRGRLRVAGDIAKE*ATPQLQATETRPTQ Trigger: CTGCGTGGGCCTGGTCTCAGTGGCCTGGAGCTGCGGTGTGGCCAACTCCTTGGCTATGTCTCCAGCAACTCTCAGCCTACCCCGCTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075607.5 ENSMUST00000215513.2 ENSMUST00000216196.2 |
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| CDS CAA 72 bp | GGTAGGCTGAGAGTTGCTGGAGACATAGCCAAGGAGTaGGCCACACCGCAGCTCCAGGCCACTGAGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: GRLRVAGDIAKE*ATPQLQATETR Trigger: CCTGGTCTCAGTGGCCTGGAGCTGCGGTGTGGCCAACTCCTTGGCTATGTCTCCAGCAACTCTCAGCCTACC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075607.5 ENSMUST00000215513.2 ENSMUST00000216196.2 |
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