Pregenerated sensors for OLFR314 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059504Ensembl transcript IDs: ENSMUST00000076393.6, ENSMUST00000205189.4
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATCTTTTGGTGACAGGTACAAGGGAAGAGGTCAGTAGAACTGGCTaGAGAGTGCCCTTCAGCTCGAAGCTGTGCTTCAGTCACTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: HLLVTGTREEVSRTG*RVPFSSKLCFSHSN Trigger: GTTGGAGTGACTGAAGCACAGCTTCGAGCTGAAGGGCACTCTCCAGCCAGTTCTACTGACCTCTTCCCTTGTACCTGTCACCAAAAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR CCA 90 bp | CTTCAGCTCGAAGCTGTGCTTCAGTCACTCCAACGCAAAACAAGGTaGCAGTTAGTCCTCAGGGTTGCTCCATTCTTTGATGGTGGTGTA | + |
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Preference number: 1 (lower is better) Translates to: LQLEAVLQSLQRKTR*QLVLRVAPFFDGGV Trigger: TACACCACCATCAAAGAATGGAGCAACCCTGAGGACTAACTGCCACCTTGTTTTGCGTTGGAGTGACTGAAGCACAGCTTCGAGCTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR TCA 90 bp | ACGCAAAACAAGGTGGCAGTTAGTCCTCAGGGTTGCTCCATTCTTTaGTGGTGGTGTATTAAACATTCTTGTGTGGGGAGGCATGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: TQNKVAVSPQGCSIL*WWCIKHSCVGRHEN Trigger: GTTCTCATGCCTCCCCACACAAGAATGTTTAATACACCACCATCAAAGAATGGAGCAACCCTGAGGACTAACTGCCACCTTGTTTTGCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR TCA 90 bp | ACAAGTACCATTGGTACCCAGCAATGGAACAGGATAGAATTGGATTaGATCCATGGACAGATTTTCATTAGAAATGGGCTCAAAGGAGTT | + |
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Preference number: 1 (lower is better) Translates to: TSTIGTQQWNRIELD*IHGQIFIRNGLKGV Trigger: AACTCCTTTGAGCCCATTTCTAATGAAAATCTGTCCATGGATTCAATCCAATTCTATCCTGTTCCATTGCTGGGTACCAATGGTACTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR-3UTR CCA 90 bp | CAGAAAGGCCTGGTGACGCCCGCCCAGGGCAGCTGCACCCTGTGTGAACTTCATGTCAGTAGAACTGGCTaGAGAGTGCCCTTCAGCTCG | + |
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Preference number: 2 (lower is better) Translates to: QKGLVTPAQGSCTLCELHVSRTG*RVPFSS Trigger: CGAGCTGAAGGGCACTCTCCAGCCAGTTCTACTGAC...ATGAAGTTCACACAGGGTGCAGCTGCCCTGGGCGGGCGTCACCAGGCCTTTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR CAA 90 bp | ACCGAGACACAGGGACAGGTGCACACACACCCCTTAGGGGCGGCTTaGCTTTCCATGATCACAGCTACTTGCGACAATTGCCAACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: TETQGQVHTHPLGAA*LSMITATCDNCQLK Trigger: TTTCAGTTGGCAATTGTCGCAAGTAGCTGTGATCATGGAAAGCAAAGCCGCCCCTAAGGGGTGTGTGTGCACCTGTCCCTGTGTCTCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR-3UTR GCA 90 bp | CACGCACACACTCATAAAACACAAGTACCATTGGTACCCAGCAATGGAACAGGACTCATCCCCCTACAGTaGTGCCTTCTGAGTGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: HAHTHKTQVPLVPSNGTGLIPLQ*CLLSAD Trigger: ATCTGCACTCAGAAGGCAGCACTGTAGGGGGATGAG...TCCTGTTCCATTGCTGGGTACCAATGGTACTTGTGTTTTATGAGTGTGTGCGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGCCCGCGTATCCACTCAGTATATGCTATCCATCTATCTGTCACGTAAGAGTTTGGAATTCTCAGTaGCTCCAGGTATCCACTGGG | + |
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Preference number: 2 (lower is better) Translates to: FWPAYPLSICYPSICHVRVWNSQ*LQVSTG Trigger: CCCAGTGGATACCTGGAGCCACTGAGAATTCCAAAC...TCTTACGTGACAGATAGATGGATAGCATATACTGAGTGGATACGCGGGCCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCATCTCACCTAGCGTAAATCAGTATAAAATCATTGAGCGTCAACAAGCAATCCACTGGGCATCCTaGGACATAGCCTCTGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: EGISPSVNQYKIIERQQAIHWAS*DIASVL Trigger: CAACACAGAGGCTATGTCTCAGGATGCCCAGTGGAT...TGCTTGTTGACGCTCAATGATTTTATACTGATTTACGCTAGGTGAGATGCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR-3UTR TCA 90 bp | CCCAGGGCAGCTGCACCCTGTGTGAACTTCATGTGGGAATTGGAAATCAATCTGAGGATAGAATTGGATTaGATCCATGGACAGATTTTC | + |
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Preference number: 2 (lower is better) Translates to: PRAAAPCVNFMWELEINLRIELD*IHGQIF Trigger: GAAAATCTGTCCATGGATTCAATCCAATTCTATCCT...CAGATTGATTTCCAATTCCCACATGAAGTTCACACAGGGTGCAGCTGCCCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR-3UTR GCA 90 bp | AGCGTAAATCAGTATAAAATCATTGAGCGTCAACAAGCACCAGGAAGCTACATAGAACTGGCTGGAGAGTaGCCTTCAGCTCGAAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SVNQYKIIERQQAPGSYIELAGE*PSARSC Trigger: ACAGCTTCGAGCTGAAGGGCACTCTCCAGCCAGTTC...TATGTAGCTTCCTGGTGCTTGTTGACGCTCAATGATTTTATACTGATTTACGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR-3UTR TCA 90 bp | GTTTTGCATCTTTTGGTGACAGGTACAAGGGAAGAGGTCAGTAGAACTGGCTGGGATTTTAGTTTGAAATaGGAAGGTGGCTCCACAATC | + |
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Preference number: 2 (lower is better) Translates to: VLHLLVTGTREEVSRTGWDFSLK*EGGSTI Trigger: GATTGTGGAGCCACCTTCTCATTTCAAACTAAAATC...CCAGCCAGTTCTACTGACCTCTTCCCTTGTACCTGTCACCAAAAGATGCAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR-3UTR CCA 90 bp | TCAACTCATCCCCCTACAGTGCTGCCTTCTGAGTGCAGATTGATATTTCGTACAAAATCAGCAAGAGTTTaGAATTCTCAGTGGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: STHPPTVLPSECRLIFRTKSARV*NSQWLQ Trigger: CTGGAGCCACTGAGAATTCCAAACTCTTGCTGATTT...TGTACGAAATATCAATCTGCACTCAGAAGGCAGCACTGTAGGGGGATGAGTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR-3UTR GCA 90 bp | ACACACACACACACACACACGCACGCACACACTCATAAAACACAAGTACCATTGGTAAATGCCTCAAAGTaGAAAAATCGTGATACAGAA | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTHAHTHKTQVPLVNASK*KNRDTE Trigger: TTCTGTATCACGATTTTTGCACTTTGAGGCATTTAC...CAATGGTACTTGTGTTTTATGAGTGTGTGCGTGCGTGTGTGTGTGTGTGTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR GCA 72 bp | GAGCAGAAAGGCCTGGTGACGCCCGCCCAGGGCAGCTaGACCCTGTGTGAACTTCATGTGGGAATTGGAAAT | + |
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Preference number: 3 (lower is better) Translates to: EQKGLVTPAQGS*TLCELHVGIGN Trigger: ATTTCCAATTCCCACATGAAGTTCACACAGGGTGCAGCTGCCCTGGGCGGGCGTCACCAGGCCTTTCTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR GCA 72 bp | AGAACTGGCTGGAGAGTGCCCTTCAGCTCGAAGCTGTaGTTCAGTCACTCCAACGCAAAACAAGGTGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: RTGWRVPFSSKL*FSHSNAKQGGS Trigger: ACTGCCACCTTGTTTTGCGTTGGAGTGACTGAAGCACAGCTTCGAGCTGAAGGGCACTCTCCAGCCAGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR TCA 72 bp | CTCATCCCCCTACAGTGCTGCCTTCTGAGTGCAGATTaGTATTTCGTACAGTCCTGGTACCTACTTCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: LIPLQCCLLSAD*YFVQSWYLLLA Trigger: GGCCAGAAGTAGGTACCAGGACTGTACGAAATATCAATCTGCACTCAGAAGGCAGCACTGTAGGGGGATGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR TCA 72 bp | AAGGTGGCAGTTAGTCCTCAGGGTTGCTCCATTCTTTaGTGGTGGTGTATTAAACATTCTTGTGTGGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: KVAVSPQGCSIL*WWCIKHSCVGR Trigger: CCTCCCCACACAAGAATGTTTAATACACCACCATCAAAGAATGGAGCAACCCTGAGGACTAACTGCCACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR TCA 72 bp | GAAATGAGAAGGTGGCTCCACAATCAGCTGCCAGCATaGCGTTTAACCAAAACCTCAAAGGAACAGAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: EMRRWLHNQLPA*RLTKTSKEQSK Trigger: TTTGCTCTGTTCCTTTGAGGTTTTGGTTAAACGTCATGCTGGCAGCTGATTGTGGAGCCACCTTCTCATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR CCA 72 bp | CAGATTGATATTTCGTACAGTCCTGGTACCTACTTCTaGCCCGCGTATCCACTCAGTATATGCTATCCATCT | + |
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Preference number: 3 (lower is better) Translates to: QIDISYSPGTYF*PAYPLSICYPS Trigger: AGATGGATAGCATATACTGAGTGGATACGCGGGCCAGAAGTAGGTACCAGGACTGTACGAAATATCAATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR-3UTR CAA 90 bp | AATGCCTCAAAGTGCAAAAATCGTGATACAGAAGTCTCCATGTTAAAGACAAGCAACATAGTGTTACTTTaGCTGAGGCTCCTCAGGTTC | + |
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Preference number: 3 (lower is better) Translates to: NASKCKNRDTEVSMLKTSNIVLL*LRLLRF Trigger: GAACCTGAGGAGCCTCAGCAAAAGTAACACTATGTT...GCTTGTCTTTAACATGGAGACTTCTGTATCACGATTTTTGCACTTTGAGGCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR-3UTR CAA 90 bp | AATGCCTCAAAGTGCAAAAATCGTGATACAGAAGTCTCCATGTTAAAGACAAGCAAAATCAGCAAGAGTTaGGAATTCTCAGTGGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: NASKCKNRDTEVSMLKTSKISKS*EFSVAP Trigger: TGGAGCCACTGAGAATTCCAAACTCTTGCTGATTTT...GCTTGTCTTTAACATGGAGACTTCTGTATCACGATTTTTGCACTTTGAGGCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR TCA 72 bp | ATTGGTACCCAGCAATGGAACAGGATAGAATTGGATTaGATCCATGGACAGATTTTCATTAGAAATGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: IGTQQWNRIELD*IHGQIFIRNGL Trigger: GAGCCCATTTCTAATGAAAATCTGTCCATGGATTCAATCCAATTCTATCCTGTTCCATTGCTGGGTACCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| CDS-3UTR TCA 90 bp | AACCGAGACACAGGGACAGGTGCACACACACCCCTTAGGGGCGGCTTTGCTTTCAGCCGGCGGTCCTGGTaGATAAGGAGAAGCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: NRDTGTGAHTPLRGGFAFSRRSW*IRRSRR Trigger: CCTCCTGCTTCTCCTTATTCACCAGGACCGCCGGCT...GAAAGCAAAGCCGCCCCTAAGGGGTGTGTGTGCACCTGTCCCTGTGTCTCGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| CDS-3UTR TCA 90 bp | AAAGGCCTGGTGACGCCCGCCCAGGGCAGCTGCACCCTGTGTGAACTTCATGTGTCCTCAGGCTACCCTTaGCTTCACTGTTCCGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: KGLVTPAQGSCTLCELHVSSGYP*LHCSED Trigger: GTCTTCGGAACAGTGAAGTCAAGGGTAGCCTGAGGA...CACATGAAGTTCACACAGGGTGCAGCTGCCCTGGGCGGGCGTCACCAGGCCTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| CDS-3UTR GCA 90 bp | GCAAGAGTTTGGAATTCTCAGTGGCTCCAGGTATCCACTGGGCATCCTGAGACATGGCGAAGGCTTTCTTaGGGGCTTCTGTGGACCGCA | + |
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Preference number: 4 (lower is better) Translates to: ARVWNSQWLQVSTGHPETWRRLS*GLLWTA Trigger: TGCGGTCCACAGAAGCCCGCAAGAAAGCCTTCGCCA...TGTCTCAGGATGCCCAGTGGATACCTGGAGCCACTGAGAATTCCAAACTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| CDS-3UTR GCA 90 bp | ACACACACACACACACACACGCACGCACACACTCATAAAACACAAGTACCATTGCCCACTACCGCCAAGTaGGAGGAGCAGGTGGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHAHTHKTQVPLPTTAK*EEQVAK Trigger: CTTCGCCACCTGCTCCTCGCACTTGGCGGTAGTGGG...CAATGGTACTTGTGTTTTATGAGTGTGTGCGTGCGTGTGTGTGTGTGTGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| CDS-3UTR GCA 90 bp | TTCTGGCCCGCGTATCCACTCAGTATATGCTATCCATCTATCTGTCACGTAAGACATGGCTCCATCAGCTaGTCCCAGGAGCCAAGACGC | + |
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Preference number: 4 (lower is better) Translates to: FWPAYPLSICYPSICHVRHGSIS*SQEPRR Trigger: GCGTCTTGGCTCCTGGGAGCAGCTGATGGAGCCATG...TCTTACGTGACAGATAGATGGATAGCATATACTGAGTGGATACGCGGGCCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| CDS-3UTR GCA 90 bp | GTAGAACTGGCTGGAGAGTGCCCTTCAGCTCGAAGCTGTGCTTCAGTCACTCCACTATTTCATTCCGGCTaGAAAACTGGAAGCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VELAGECPSARSCASVTPLFHSG*KTGSSG Trigger: CCCTGAGCTTCCAGTTTTGCAGCCGGAATGAAATAG...TGGAGTGACTGAAGCACAGCTTCGAGCTGAAGGGCACTCTCCAGCCAGTTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| CDS-3UTR CCA 90 bp | CGTCAACAAGCACCAGGAAGCTACATACAGGAAACAGAACGAGGTACTGCCATGTTCCGGCTGCAAAACTaGAAGCTCAGGGTGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RQQAPGSYIQETERGTAMFRLQN*KLRVAA Trigger: TGCTGCCACCCTGAGCTTCCAGTTTTGCAGCCGGAA...CATGGCAGTACCTCGTTCTGTTTCCTGTATGTAGCTTCCTGGTGCTTGTTGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR CAA 72 bp | ACTCATCCCCCTACAGTGCTGCCTTCTGAGTGCAGATaGATATTTCGTACAGTCCTGGTACCTACTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: THPPTVLPSECR*IFRTVLVPTSG Trigger: GCCAGAAGTAGGTACCAGGACTGTACGAAATATCAATCTGCACTCAGAAGGCAGCACTGTAGGGGGATGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| CDS-3UTR TCA 90 bp | GCAAGAGTTTGGAATTCTCAGTGGCTCCAGGTATCCACTGGGCATCCTGAGACAAGCCAGCGGCAGAGATaGACTTCTTACCCATTAAAT | + |
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Preference number: 4 (lower is better) Translates to: ARVWNSQWLQVSTGHPETSQRQR*TSYPLN Trigger: ATTTAATGGGTAAGAAGTTCATCTCTGCCGCTGGCT...TGTCTCAGGATGCCCAGTGGATACCTGGAGCCACTGAGAATTCCAAACTCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| CDS-3UTR TCA 90 bp | AGCGTAAATCAGTATAAAATCATTGAGCGTCAACAAGCACCAGGAAGCTACATATGCCTACCACAGAGTTaGAGGCCACAGTCAGAACCA | + |
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Preference number: 4 (lower is better) Translates to: SVNQYKIIERQQAPGSYICLPQS*RPQSEP Trigger: TGGTTCTGACTGTGGCCTTCAACTCTGTGGTAGGCA...TATGTAGCTTCCTGGTGCTTGTTGACGCTCAATGATTTTATACTGATTTACGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| CDS-3UTR TCA 90 bp | AGCGTAAATCAGTATAAAATCATTGAGCGTCAACAAGCACCAGGAAGCTACATAGCCTCACAGAAGAAGTaGTCTATTTCATTCCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SVNQYKIIERQQAPGSYIASQKK*SISFRL Trigger: CAGCCGGAATGAAATAGATCACTTCTTCTGTGAGGC...TATGTAGCTTCCTGGTGCTTGTTGACGCTCAATGATTTTATACTGATTTACGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| 3UTR CAA 72 bp | TCATTAGAAATGGGCTCAAAGGAGTTCTGTGTCCTTTaGAGTTTTGCATCTTTTGGTGACAGGTACAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SLEMGSKEFCVL*SFASFGDRYKG Trigger: TCCCTTGTACCTGTCACCAAAAGATGCAAAACTCAAAAGGACACAGAACTCCTTTGAGCCCATTTCTAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| CDS-3UTR TCA 90 bp | GAAGGCATCTCACCTAGCGTAAATCAGTATAAAATCATTGAGCGTCAACAAGCACACAGCAAATGTACATaGAAAACTCAAAGGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: EGISPSVNQYKIIERQQAHSKCT*KTQRLM Trigger: CATCAGCCTTTGAGTTTTTCATGTACATTTGCTGTG...TGCTTGTTGACGCTCAATGATTTTATACTGATTTACGCTAGGTGAGATGCCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| CDS-3UTR CAA 90 bp | CCGAGAGGCAGGACAAAGAAACATAGTGTTACTTTTGCTGAGGCTCCTCAGGTTCAGGGTGGCAGCAGCTaGCATGGCTCCATCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: PRGRTKKHSVTFAEAPQVQGGSS*HGSISC Trigger: GCAGCTGATGGAGCCATGCAAGCTGCTGCCACCCTG...AACCTGAGGAGCCTCAGCAAAAGTAACACTATGTTTCTTTGTCCTGCCTCTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| CDS-3UTR CAA 90 bp | CTGGCCCGCGTATCCACTCAGTATATGCTATCCATCTATCTGTCACGTAAGAGCTTGCCTACCACAGAGTaGAAGGCCACAGTCAGAACC | + |
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Preference number: 5 (lower is better) Translates to: LARVSTQYMLSIYLSRKSLPTTE*KATVRT Trigger: GGTTCTGACTGTGGCCTTCAACTCTGTGGTAGGCAA...GCTCTTACGTGACAGATAGATGGATAGCATATACTGAGTGGATACGCGGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| CDS-3UTR CAA 90 bp | GCAAGAGTTTGGAATTCTCAGTGGCTCCAGGTATCCACTGGGCATCCTGAGACAGTATACCTTTCCCCTTaGTACCTCCAGCTAGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: ARVWNSQWLQVSTGHPETVYLSP*YLQLGP Trigger: TGGACCTAGCTGGAGGTACAAAGGGGAAAGGTATAC...TGTCTCAGGATGCCCAGTGGATACCTGGAGCCACTGAGAATTCCAAACTCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| CDS-3UTR CAA 90 bp | TCCCACAGTAAGAACAAACGGATCTATGAAACCGAGAGGCAGGACAAAGAAACATTCCTCAGGCTACCCTaGACTTCACTGTTCCGAAGA | + |
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Preference number: 5 (lower is better) Translates to: SHSKNKRIYETERQDKETFLRLP*TSLFRR Trigger: TCTTCGGAACAGTGAAGTCAAGGGTAGCCTGAGGAA...TGTTTCTTTGTCCTGCCTCTCGGTTTCATAGATCCGTTTGTTCTTACTGTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205189.4 |
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| CDS TCA 72 bp | GCCAAGCGCAATAACACAGGGGCCTCACAGAAGAAGTaGTCTATTTCATTCCGGCTGCAAAACTGGAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: AKRNNTGASQKK*SISFRLQNWKL Trigger: GAGCTTCCAGTTTTGCAGCCGGAATGAAATAGATCACTTCTTCTGTGAGGCCCCTGTGTTATTGCGCTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076393.6 ENSMUST00000205189.4 |
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