Pregenerated sensors for OLFR312 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096806Ensembl transcript IDs: ENSMUST00000078217.2, ENSMUST00000216407.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCATAGCTCCAGAGCCTGGGATGAGGGCGTCAATCAGCCCCAGCTaGCTGGCCATCTCCTTGTGTACAAATCCAGGTTCTACAAACAGA | + |
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Preference number: 1 (lower is better) Translates to: AIAPEPGMRASISPS*LAISLCTNPGSTNR Trigger: TCTGTTTGTAGAACCTGGATTTGTACACAAGGAGATGGCCAGCCAGCTGGGGCTGATTGACGCCCTCATCCCAGGCTCTGGAGCTATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR CCA 90 bp | AGGTGTATGGTATTCACAGCAAAAGAGAGGCAGAGACACAGGATGTaGTTACGGAGAGCAAGTCTGTTCCACAAGGGGACTTGCCACTCA | + |
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Preference number: 1 (lower is better) Translates to: RCMVFTAKERQRHRM*LRRASLFHKGTCHS Trigger: TGAGTGGCAAGTCCCCTTGTGGAACAGACTTGCTCTCCGTAACCACATCCTGTGTCTCTGCCTCTCTTTTGCTGTGAATACCATACACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR TCA 90 bp | TTTATGAGCAATGTCAAGGGTCCCAGGAGGGGAAAAGGGTGCTTGTaGATGAAACACTTGGACCCAACAACAGCCTTCAGAGTCACACAC | + |
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Preference number: 1 (lower is better) Translates to: FMSNVKGPRRGKGCL*MKHLDPTTAFRVTH Trigger: GTGTGTGACTCTGAAGGCTGTTGTTGGGTCCAAGTGTTTCATTCACAAGCACCCTTTTCCCCTCCTGGGACCCTTGACATTGCTCATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR CCA 90 bp | TCTTCTGGGTCGGCAAAGACCTCCAGTGGAAATCCAACAGGTGTATaGTATTCACAGCAAAAGAGAGGCAGAGACACAGGATGTGGTTAC | + |
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Preference number: 1 (lower is better) Translates to: SSGSAKTSSGNPTGV*YSQQKRGRDTGCGY Trigger: GTAACCACATCCTGTGTCTCTGCCTCTCTTTTGCTGTGAATACCATACACCTGTTGGATTTCCACTGGAGGTCTTTGCCGACCCAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR CCA 90 bp | ACTGACATAAGACACTCCCTCTTCTGGGTCGGCAAAGACCTCCAGTaGAAATCCAACAGGTGTATGGTATTCACAGCAAAAGAGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: TDIRHSLFWVGKDLQ*KSNRCMVFTAKERQ Trigger: CTGCCTCTCTTTTGCTGTGAATACCATACACCTGTTGGATTTCCACTGGAGGTCTTTGCCGACCCAGAAGAGGGAGTGTCTTATGTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR GCA 90 bp | TGGGAGACAGTGAGATTGGCAGTGAGAATGGCTGTTCCTGAAGTGTaGAAAACCCACAAGGCACATCTGAGAATCATTGTGACAAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: WETVRLAVRMAVPEV*KTHKAHLRIIVTRL Trigger: AAGCCTTGTCACAATGATTCTCAGATGTGCCTTGTGGGTTTTGCACACTTCAGGAACAGCCATTCTCACTGCCAATCTCACTGTCTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR CCA 90 bp | GGTGTAGAACCCATTAGAGAAAATATGTCACGGCAGGGACTGTGGTaGCTTCTGGCATGCTCTGGTACTGGTTTTATGAGCAATGTCAAG | + |
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Preference number: 1 (lower is better) Translates to: GVEPIRENMSRQGLW*LLACSGTGFMSNVK Trigger: CTTGACATTGCTCATAAAACCAGTACCAGAGCATGCCAGAAGCCACCACAGTCCCTGCCGTGACATATTTTCTCTAATGGGTTCTACACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR CCA 90 bp | ACAACCATCCTTAACTCTAGTCTCAGGCAATCTGATGCCTTCTTTTaGTTTCTTTGGGAACCAGGCACAGACATGGTGCAAACACATGCA | + |
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Preference number: 1 (lower is better) Translates to: TTILNSSLRQSDAFF*FLWEPGTDMVQTHA Trigger: TGCATGTGTTTGCACCATGTCTGTGCCTGGTTCCCAAAGAAACCAAAAGAAGGCATCAGATTGCCTGAGACTAGAGTTAAGGATGGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR GCA 90 bp | CTATATATGGGTATGTCTATATACGTAAGTGCACATAGTTCTGGGTaGCCATGGAGGCCAGTAGAGGGTGTAGAACCCATTAGAGAAAAT | + |
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Preference number: 1 (lower is better) Translates to: LYMGMSIYVSAHSSG*PWRPVEGVEPIREN Trigger: ATTTTCTCTAATGGGTTCTACACCCTCTACTGGCCTCCATGGGCACCCAGAACTATGTGCACTTACGTATATAGACATACCCATATATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR TCA 90 bp | AAAAGGGCAATCCTGGCAGTATATAGGACGAGGCCACATTTCCCATaGACTGACATGAGTGAATTTTTAATTAGAAAGGAACTTAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: KRAILAVYRTRPHFP*TDMSEFLIRKELKN Trigger: ATTCTTAAGTTCCTTTCTAATTAAAAATTCACTCATGTCAGTTCATGGGAAATGTGGCCTCGTCCTATATACTGCCAGGATTGCCCTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGCAGAGACACAGGATGTGGTTACGGAGAGCAAGTCTGTTCCACAAGGGGACCGGCAGGGACTGTGGTaGCTTCTGGCATGCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: EAETQDVVTESKSVPQGDRQGLW*LLACSG Trigger: ACCAGAGCATGCCAGAAGCCACCACAGTCCCTGCCG...GTCCCCTTGTGGAACAGACTTGCTCTCCGTAACCACATCCTGTGTCTCTGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGCAGAGACACAGGATGTGGTTACGGAGAGCAAGTCTGTTCCACAAGGGGACTCAATCAGCCCCAGCTaGCTGGCCATCTCCTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: EAETQDVVTESKSVPQGDSISPS*LAISLC Trigger: ACACAAGGAGATGGCCAGCCAGCTGGGGCTGATTGA...GTCCCCTTGTGGAACAGACTTGCTCTCCGTAACCACATCCTGTGTCTCTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGTGACAAGGCTTAGCACTGACATAAGACACTCCCTCTTCTGGGTCGGCAAACTCCAGAGCCTGGGATaGGGGCGTCAATCAGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: IVTRLSTDIRHSLFWVGKLQSLG*GRQSAP Trigger: TGGGGCTGATTGACGCCCTCATCCCAGGCTCTGGAG...TTTGCCGACCCAGAAGAGGGAGTGTCTTATGTCAGTGCTAAGCCTTGTCACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGGGACTTGCCACTCACTCAGTACACACAGTGCTCCTGAGAGTTCTGCCATAGCACATAGTTCTGGGTaGCCATGGAGGCCAGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: KGTCHSLSTHSAPESSAIAHSSG*PWRPVE Trigger: CTCTACTGGCCTCCATGGGCACCCAGAACTATGTGC...TATGGCAGAACTCTCAGGAGCACTGTGTGTACTGAGTGAGTGGCAAGTCCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCAAACAGTTTTGTCAGCAGAATATAGATCAGACATCTCTGGTGACAGACACAGTTCTGGGTGCCCATaGAGGCCAGTAGAGGGTGTA | + |
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Preference number: 2 (lower is better) Translates to: QQTVLSAEYRSDISGDRHSSGCP*RPVEGV Trigger: TACACCCTCTACTGGCCTCCATGGGCACCCAGAACT...GTGTCTGTCACCAGAGATGTCTGATCTATATTCTGCTGACAAAACTGTTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGATCAATTCGCAGCATCCATATTGACAGTCACAACCATCCTTAACTCTAGTTCTGATGCCTTCTTTTaGTTTCTTTGGGAACCAGGC | + |
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Preference number: 2 (lower is better) Translates to: WDQFAASILTVTTILNSSSDAFF*FLWEPG Trigger: GCCTGGTTCCCAAAGAAACCAAAAGAAGGCATCAGA...ACTAGAGTTAAGGATGGTTGTGACTGTCAATATGGATGCTGCGAATTGATCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR CCA 72 bp | CCAGAGCCTGGGATGAGGGCGTCAATCAGCCCCAGCTaGCTGGCCATCTCCTTGTGTACAAATCCAGGTTCT | + |
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Preference number: 3 (lower is better) Translates to: PEPGMRASISPS*LAISLCTNPGS Trigger: AGAACCTGGATTTGTACACAAGGAGATGGCCAGCCAGCTGGGGCTGATTGACGCCCTCATCCCAGGCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR TCA 72 bp | GGGGACTTGCCACTCACTCAGTACACACAGTGCTCCTaGGAGTTCTGCCATAGCTCCAGAGCCTGGGATGAG | + |
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Preference number: 3 (lower is better) Translates to: GDLPLTQYTQCS*EFCHSSRAWDE Trigger: CTCATCCCAGGCTCTGGAGCTATGGCAGAACTCTCAGGAGCACTGTGTGTACTGAGTGAGTGGCAAGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR CCA 72 bp | GTCACGGCAGGGACTGTGGTGGCTTCTGGCATGCTCTaGTACTGGTTTTATGAGCAATGTCAAGGGTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: VTAGTVVASGML*YWFYEQCQGSQ Trigger: CTGGGACCCTTGACATTGCTCATAAAACCAGTACCAGAGCATGCCAGAAGCCACCACAGTCCCTGCCGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR GCA 72 bp | TGGTTACGGAGAGCAAGTCTGTTCCACAAGGGGACTTaGCACTCACTCAGTACACACAGTGCTCCTGAGAGT | + |
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Preference number: 3 (lower is better) Translates to: WLRRASLFHKGT*HSLSTHSAPES Trigger: ACTCTCAGGAGCACTGTGTGTACTGAGTGAGTGGCAAGTCCCCTTGTGGAACAGACTTGCTCTCCGTAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR TCA 72 bp | TCAAGGGTCCCAGGAGGGGAAAAGGGTGCTTGTGAATaGAACACTTGGACCCAACAACAGCCTTCAGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: SRVPGGEKGACE*NTWTQQQPSES Trigger: TGACTCTGAAGGCTGTTGTTGGGTCCAAGTGTTTCATTCACAAGCACCCTTTTCCCCTCCTGGGACCCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR TCA 72 bp | AATGTCAAGGGTCCCAGGAGGGGAAAAGGGTGCTTGTaGATGAAACACTTGGACCCAACAACAGCCTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: NVKGPRRGKGCL*MKHLDPTTAFR Trigger: TCTGAAGGCTGTTGTTGGGTCCAAGTGTTTCATTCACAAGCACCCTTTTCCCCTCCTGGGACCCTTGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR CCA 72 bp | GTATTCACAGCAAAAGAGAGGCAGAGACACAGGATGTaGTTACGGAGAGCAAGTCTGTTCCACAAGGGGACT | + |
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Preference number: 3 (lower is better) Translates to: VFTAKERQRHRM*LRRASLFHKGT Trigger: AGTCCCCTTGTGGAACAGACTTGCTCTCCGTAACCACATCCTGTGTCTCTGCCTCTCTTTTGCTGTGAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR TCA 72 bp | CCAGGTTCTACAAACAGAGAGGAGAAGGAGAGTGAATaGCTGTCTAGGCCACCATGTAGTGTAAGACTGGGT | + |
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Preference number: 3 (lower is better) Translates to: PGSTNREEKESE*LSRPPCSVRLG Trigger: ACCCAGTCTTACACTACATGGTGGCCTAGACAGTCATTCACTCTCCTTCTCCTCTCTGTTTGTAGAACCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR TCA 72 bp | GGAGACAGTGAGATTGGCAGTGAGAATGGCTGTTCCTaGAGTGTGCAAAACCCACAAGGCACATCTGAGAAT | + |
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Preference number: 3 (lower is better) Translates to: GDSEIGSENGCS*SVQNPQGTSEN Trigger: ATTCTCAGATGTGCCTTGTGGGTTTTGCACACTTCAGGAACAGCCATTCTCACTGCCAATCTCACTGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR GCA 72 bp | GGTATGTCTATATACGTAAGTGCACATAGTTCTGGGTaGCCATGGAGGCCAGTAGAGGGTGTAGAACCCATT | + |
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Preference number: 3 (lower is better) Translates to: GMSIYVSAHSSG*PWRPVEGVEPI Trigger: AATGGGTTCTACACCCTCTACTGGCCTCCATGGGCACCCAGAACTATGTGCACTTACGTATATAGACATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR CCA 72 bp | GAACCCATTAGAGAAAATATGTCACGGCAGGGACTGTaGTGGCTTCTGGCATGCTCTGGTACTGGTTTTATG | + |
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Preference number: 3 (lower is better) Translates to: EPIRENMSRQGL*WLLACSGTGFM Trigger: CATAAAACCAGTACCAGAGCATGCCAGAAGCCACCACAGTCCCTGCCGTGACATATTTTCTCTAATGGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR CCA 72 bp | AGACACTCCCTCTTCTGGGTCGGCAAAGACCTCCAGTaGAAATCCAACAGGTGTATGGTATTCACAGCAAAA | + |
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Preference number: 3 (lower is better) Translates to: RHSLFWVGKDLQ*KSNRCMVFTAK Trigger: TTTTGCTGTGAATACCATACACCTGTTGGATTTCCACTGGAGGTCTTTGCCGACCCAGAAGAGGGAGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR GCA 72 bp | GTGAGATTGGCAGTGAGAATGGCTGTTCCTGAAGTGTaGAAAACCCACAAGGCACATCTGAGAATCATTGTG | + |
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Preference number: 3 (lower is better) Translates to: VRLAVRMAVPEV*KTHKAHLRIIV Trigger: CACAATGATTCTCAGATGTGCCTTGTGGGTTTTGCACACTTCAGGAACAGCCATTCTCACTGCCAATCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR CCA 72 bp | TCTATATACGTAAGTGCACATAGTTCTGGGTGCCCATaGAGGCCAGTAGAGGGTGTAGAACCCATTAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: SIYVSAHSSGCP*RPVEGVEPIRE Trigger: TTCTCTAATGGGTTCTACACCCTCTACTGGCCTCCATGGGCACCCAGAACTATGTGCACTTACGTATATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR CCA 72 bp | AGTCTCAGGCAATCTGATGCCTTCTTTTGGTTTCTTTaGGAACCAGGCACAGACATGGTGCAAACACATGCA | + |
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Preference number: 3 (lower is better) Translates to: SLRQSDAFFWFL*EPGTDMVQTHA Trigger: TGCATGTGTTTGCACCATGTCTGTGCCTGGTTCCCAAAGAAACCAAAAGAAGGCATCAGATTGCCTGAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR TCA 72 bp | ACCAGAAAACCTGGGATCAATTCGCAGCATCCATATTaGCAGTCACAACCATCCTTAACTCTAGTCTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: TRKPGINSQHPY*QSQPSLTLVSG Trigger: GCCTGAGACTAGAGTTAAGGATGGTTGTGACTGTCAATATGGATGCTGCGAATTGATCCCAGGTTTTCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR TCA 72 bp | ATCCTGGCAGTATATAGGACGAGGCCACATTTCCCATaGACTGACATGAGTGAATTTTTAATTAGAAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: ILAVYRTRPHFP*TDMSEFLIRKE Trigger: TTCCTTTCTAATTAAAAATTCACTCATGTCAGTTCATGGGAAATGTGGCCTCGTCCTATATACTGCCAGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| CDS-3UTR TCA 90 bp | GAGGCAGAGACACAGGATGTGGTTACGGAGAGCAAGTCTGTTCCACAAGGGGACCATAGATCAGTGGTCTaGGGATGGCTAGGCACCGGT | + |
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Preference number: 4 (lower is better) Translates to: EAETQDVVTESKSVPQGDHRSVV*GWLGTG Trigger: ACCGGTGCCTAGCCATCCTCAGACCACTGATCTATG...GTCCCCTTGTGGAACAGACTTGCTCTCCGTAACCACATCCTGTGTCTCTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| CDS-3UTR TCA 90 bp | GAGGCAGAGACACAGGATGTGGTTACGGAGAGCAAGTCTGTTCCACAAGGGGACGAATGTGTGGAAGGCTaGGTAGATAGCTCCACCCAC | + |
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Preference number: 4 (lower is better) Translates to: EAETQDVVTESKSVPQGDECVEG*VDSSTH Trigger: GTGGGTGGAGCTATCTACTCAGCCTTCCACACATTC...GTCCCCTTGTGGAACAGACTTGCTCTCCGTAACCACATCCTGTGTCTCTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| CDS-3UTR TCA 90 bp | AAGGGGACTTGCCACTCACTCAGTACACACAGTGCTCCTGAGAGTTCTGCCATACAGCTGTGGGACATCTaGGAAGCCCCTGAGGATGAA | + |
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Preference number: 4 (lower is better) Translates to: KGTCHSLSTHSAPESSAIQLWDI*EAPEDE Trigger: TTCATCCTCAGGGGCTTCTCAGATGTCCCACAGCTG...TATGGCAGAACTCTCAGGAGCACTGTGTGTACTGAGTGAGTGGCAAGTCCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| CDS-3UTR TCA 90 bp | AAGGGGACTTGCCACTCACTCAGTACACACAGTGCTCCTGAGAGTTCTGCCATAATGACTGTGGTCAGGTaGGAGGAGCAGGTAGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: KGTCHSLSTHSAPESSAIMTVVR*EEQVEK Trigger: CTTTTCTACCTGCTCCTCTCACCTGACCACAGTCAT...TATGGCAGAACTCTCAGGAGCACTGTGTGTACTGAGTGAGTGGCAAGTCCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| CDS-3UTR GCA 90 bp | AAGGGGACTTGCCACTCACTCAGTACACACAGTGCTCCTGAGAGTTCTGCCATACTTCTACTGAGGGGATaGGAAGAACTGTGGCCACAA | + |
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Preference number: 4 (lower is better) Translates to: KGTCHSLSTHSAPESSAILLLRG*EELWPQ Trigger: TTGTGGCCACAGTTCTTCGCATCCCCTCAGTAGAAG...TATGGCAGAACTCTCAGGAGCACTGTGTGTACTGAGTGAGTGGCAAGTCCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| CDS-3UTR TCA 90 bp | GAGGCAGAGACACAGGATGTGGTTACGGAGAGCAAGTCTGTTCCACAAGGGGACAATATTTCTGGCTCATaGTGGTTCCATAGATCAGTG | + |
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Preference number: 4 (lower is better) Translates to: EAETQDVVTESKSVPQGDNISGS*WFHRSV Trigger: CACTGATCTATGGAACCATCATGAGCCAGAAATATT...GTCCCCTTGTGGAACAGACTTGCTCTCCGTAACCACATCCTGTGTCTCTGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| CDS-3UTR TCA 90 bp | TGGGATCAATTCGCAGCATCCATATTGACAGTCACAACCATCCTTAACTCTAGTCTTGGGGATGGTGGCTaGGGTGTAGCAAATGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: WDQFAASILTVTTILNSSLGDGG*GVANVQ Trigger: CTGGACATTTGCTACACCTCAGCCACCATCCCCAAG...ACTAGAGTTAAGGATGGTTGTGACTGTCAATATGGATGCTGCGAATTGATCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| CDS-3UTR TCA 90 bp | TGGGATCAATTCGCAGCATCCATATTGACAGTCACAACCATCCTTAACTCTAGTATAGGAGATGACCCCTaGGCCTGTGAGGGATATCAC | + |
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Preference number: 4 (lower is better) Translates to: WDQFAASILTVTTILNSSIGDDP*ACEGYH Trigger: GTGATATCCCTCACAGGCTCAGGGGTCATCTCCTAT...ACTAGAGTTAAGGATGGTTGTGACTGTCAATATGGATGCTGCGAATTGATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| CDS-3UTR TCA 90 bp | CAGCAAACAGTTTTGTCAGCAGAATATAGATCAGACATCTCTGGTGACAGACACGGAGGGAGAAGGTGTTaGATGTGTGGAAGGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: QQTVLSAEYRSDISGDRHGGRRC*MCGRLS Trigger: ACTCAGCCTTCCACACATTCAACACCTTCTCCCTCC...GTGTCTGTCACCAGAGATGTCTGATCTATATTCTGCTGACAAAACTGTTTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| CDS-3UTR GCA 90 bp | ATTGTGACAAGGCTTAGCACTGACATAAGACACTCCCTCTTCTGGGTCGGCAAAGGCAGTGACCACCAATaGAGAACAATATTTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: IVTRLSTDIRHSLFWVGKGSDHQ*RTIFLA Trigger: AGCCAGAAATATTGTTCTGCATTGGTGGTCACTGCC...TTTGCCGACCCAGAAGAGGGAGTGTCTTATGTCAGTGCTAAGCCTTGTCACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| CDS-3UTR TCA 90 bp | CAGCAAACAGTTTTGTCAGCAGAATATAGATCAGACATCTCTGGTGACAGACACCATAAGCCATGGCCGTaGGTAGAAAGCATTCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: QQTVLSAEYRSDISGDRHHKPWP*VESILY Trigger: GTACAGAATGCTTTCTACTCACGGCCATGGCTTATG...GTGTCTGTCACCAGAGATGTCTGATCTATATTCTGCTGACAAAACTGTTTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR CAA 72 bp | TACCAGAAAACCTGGGATCAATTCGCAGCATCCATATaGACAGTCACAACCATCCTTAACTCTAGTCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: YQKTWDQFAASI*TVTTILNSSLR Trigger: CCTGAGACTAGAGTTAAGGATGGTTGTGACTGTCAATATGGATGCTGCGAATTGATCCCAGGTTTTCTGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| CDS-3UTR TCA 90 bp | CAGCAAACAGTTTTGTCAGCAGAATATAGATCAGACATCTCTGGTGACAGACACTTCCATAAAACAAGATaGCTGTGGTCAGGTGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: QQTVLSAEYRSDISGDRHFHKTR*LWSGER Trigger: CCTCTCACCTGACCACAGTCATCTTGTTTTATGGAA...GTGTCTGTCACCAGAGATGTCTGATCTATATTCTGCTGACAAAACTGTTTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| 3UTR CAA 72 bp | AAAGCAGTTCAGTTGAACACCATCCAGCAAACAGTTTaGTCAGCAGAATATAGATCAGACATCTCTGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: KAVQLNTIQQTV*SAEYRSDISGD Trigger: GTCACCAGAGATGTCTGATCTATATTCTGCTGACAAAACTGTTTGCTGGATGGTGTTCAACTGAACTGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| CDS-3UTR CCA 90 bp | TGGGATCAATTCGCAGCATCCATATTGACAGTCACAACCATCCTTAACTCTAGTAAAGAACAAGAAAAATaGGATGAGCACCAATCTCAG | + |
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Preference number: 4 (lower is better) Translates to: WDQFAASILTVTTILNSSKEQEK*DEHQSQ Trigger: CTGAGATTGGTGCTCATCCCATTTTTCTTGTTCTTT...ACTAGAGTTAAGGATGGTTGTGACTGTCAATATGGATGCTGCGAATTGATCCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| CDS TCA 90 bp | GGGTCCACAGTAGGGGAGGGAGAAGGTGTTGAATGTGTGGAAGGCTaGGTAGATAGCTCCACCCACCCAGGCAGTGACCACCAATGCAGA | + |
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Preference number: 5 (lower is better) Translates to: GSTVGEGEGVECVEG*VDSSTHPGSDHQCR Trigger: TCTGCATTGGTGGTCACTGCCTGGGTGGGTGGAGCTATCTACTCAGCCTTCCACACATTCAACACCTTCTCCCTCCCCTACTGTGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078217.2 ENSMUST00000216407.2 |
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| CDS-3UTR CAA 90 bp | TGGGATCAATTCGCAGCATCCATATTGACAGTCACAACCATCCTTAACTCTAGTGGGAGGGAGAAGGTGTaGAATGTGTGGAAGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: WDQFAASILTVTTILNSSGREKV*NVWKAE Trigger: CTCAGCCTTCCACACATTCAACACCTTCTCCCTCCC...ACTAGAGTTAAGGATGGTTGTGACTGTCAATATGGATGCTGCGAATTGATCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216407.2 |
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| CDS TCA 72 bp | GTAGGGGAGGGAGAAGGTGTTGAATGTGTGGAAGGCTaGGTAGATAGCTCCACCCACCCAGGCAGTGACCAC | + |
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Preference number: 6 (lower is better) Translates to: VGEGEGVECVEG*VDSSTHPGSDH Trigger: GTGGTCACTGCCTGGGTGGGTGGAGCTATCTACTCAGCCTTCCACACATTCAACACCTTCTCCCTCCCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078217.2 ENSMUST00000216407.2 |
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| CDS GCA 72 bp | GTAGATAGCTCCACCCACCCAGGCAGTGACCACCAATaGAGAACAATATTTCTGGCTCATGATGGTTCCATA | + |
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Preference number: 6 (lower is better) Translates to: VDSSTHPGSDHQ*RTIFLAHDGSI Trigger: TATGGAACCATCATGAGCCAGAAATATTGTTCTGCATTGGTGGTCACTGCCTGGGTGGGTGGAGCTATCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078217.2 ENSMUST00000216407.2 |
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