Pregenerated sensors for OLFR311 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094805Ensembl transcript IDs: ENSMUST00000071625.2, ENSMUST00000216473.2
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTCCACAAGGGGACTTGCCACTCACTCAGTACACACAGTGCTCCTaGGAGTTCTGCCATAGCTCCAGAGCCTGGGATGAGGGTGCCAAT | + |
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Preference number: 1 (lower is better) Translates to: VPQGDLPLTQYTQCS*EFCHSSRAWDEGAN Trigger: ATTGGCACCCTCATCCCAGGCTCTGGAGCTATGGCAGAACTCTCAGGAGCACTGTGTGTACTGAGTGAGTGGCAAGTCCCCTTGTGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR GCA 90 bp | CAGCCCCAGCTGGCTGGACATCTCCTTGTGTACAAATCCAGGTTCTaGAAACAGAGACGAGAAGGAGAGAGTGACTGTCTAGGCCACCAT | + |
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Preference number: 1 (lower is better) Translates to: QPQLAGHLLVYKSRF*KQRREGESDCLGHH Trigger: ATGGTGGCCTAGACAGTCACTCTCTCCTTCTCGTCTCTGTTTGCAGAACCTGGATTTGTACACAAGGAGATGTCCAGCCAGCTGGGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR GCA 90 bp | CACAGGATGTGGTTATGGAGAGCAAGTCTGTTCCACAAGGGGACTTaGCACTCACTCAGTACACACAGTGCTCCTGAGAGTTCTGCCATA | + |
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Preference number: 1 (lower is better) Translates to: HRMWLWRASLFHKGT*HSLSTHSAPESSAI Trigger: TATGGCAGAACTCTCAGGAGCACTGTGTGTACTGAGTGAGTGGCAAGTCCCCTTGTGGAACAGACTTGCTCTCCATAACCACATCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR TCA 90 bp | TTTATGAGCAATGTCAAGGGTCCCAGGAGGGGAAAAGGGTGCTTGTaGATGAAACACTTGGACCCAACAACAGCCTTCAGAGCCACACAC | + |
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Preference number: 1 (lower is better) Translates to: FMSNVKGPRRGKGCL*MKHLDPTTAFRATH Trigger: GTGTGTGGCTCTGAAGGCTGTTGTTGGGTCCAAGTGTTTCATTCACAAGCACCCTTTTCCCCTCCTGGGACCCTTGACATTGCTCATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR GCA 90 bp | ATTGGAGATAAAATGTCACTGCAGGGACTGTGGTGGCTTCTGGCATaGTCTGGTACTGGTTTTATGAGCAATGTCAAGGGTCCCAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: IGDKMSLQGLWWLLA*SGTGFMSNVKGPRR Trigger: CCTCCTGGGACCCTTGACATTGCTCATAAAACCAGTACCAGAGCATGCCAGAAGCCACCACAGTCCCTGCAGTGACATTTTATCTCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR TCA 90 bp | AGCACTAGTAATGAATTGTGTGCCTTCACATTCTCCATGTCGATTTaGTTCTGTCAGATTGACTACCTGGGAAAGCATGTTTATTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: STSNELCAFTFSMSI*FCQIDYLGKHVYFC Trigger: ACAGAAATAAACATGCTTTCCCAGGTAGTCAATCTGACAGAATCAAATCGACATGGAGAATGTGAAGGCACACAATTCATTACTAGTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR TCA 90 bp | ATTGTGTGCCTTCACATTCTCCATGTCGATTTGATTCTGTCAGATTaGCTACCTGGGAAAGCATGTTTATTTCTGTATAATGTGATAGCA | + |
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Preference number: 1 (lower is better) Translates to: IVCLHILHVDLILSD*LPGKACLFLYNVIA Trigger: TGCTATCACATTATACAGAAATAAACATGCTTTCCCAGGTAGTCAATCTGACAGAATCAAATCGACATGGAGAATGTGAAGGCACACAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR CAA 90 bp | CCTGGGATGAGGGTGCCAATCAGCCCCAGCTGGCTGGACATCTCCTaGTGTACAAATCCAGGTTCTGCAAACAGAGACGAGAAGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: PGMRVPISPSWLDIS*CTNPGSANRDEKER Trigger: TCTCTCCTTCTCGTCTCTGTTTGCAGAACCTGGATTTGTACACAAGGAGATGTCCAGCCAGCTGGGGCTGATTGGCACCCTCATCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCATCAGCTGCTCTCCCAAAGGAGGGTAGATTGATTTGCAGCACTTACACGGGACACTCCCTCTTCTaGGTCGGCAAAGACCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: RASAALPKEGRLICSTYTGHSLF*VGKDLQ Trigger: CTGGAGGTCTTTGCCGACCCAGAAGAGGGAGTGTCC...CGTGTAAGTGCTGCAAATCAATCTACCCTCCTTTGGGAGAGCAGCTGATGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGCATCAGCTGCTCTCCCAAAGGAGGGTAGATTGATTTGCAGCACTTACACGTACACACAGTGCTCCTaGGAGTTCTGCCATAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: RASAALPKEGRLICSTYTYTQCS*EFCHSS Trigger: GGAGCTATGGCAGAACTCTCAGGAGCACTGTGTGTA...CGTGTAAGTGCTGCAAATCAATCTACCCTCCTTTGGGAGAGCAGCTGATGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR CCA 90 bp | TCACAGCAAAAGAGAGGCAGAGACACAGGATGTGGTTATGGAGAGCAAGTCTGTCATAGCTCCAGAGCCTaGGATGAGGGTGCCAATCAG | + |
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Preference number: 2 (lower is better) Translates to: SQQKRGRDTGCGYGEQVCHSSRA*DEGANQ Trigger: CTGATTGGCACCCTCATCCCAGGCTCTGGAGCTATG...ACAGACTTGCTCTCCATAACCACATCCTGTGTCTCTGCCTCTCTTTTGCTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR TCA 90 bp | GCCACTTTGTGTGTAATACAGACACATAAGAGAATATCCATCCCACTTCCTCCAACCCAGCCTTCCTTCTaGGCAGGACACTCTTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: ATLCVIQTHKRISIPLPPTQPSF*AGHSCE Trigger: CTCACAAGAGTGTCCTGCTCAGAAGGAAGGCTGGGT...TGGAGGAAGTGGGATGGATATTCTCTTATGTGTCTGTATTACACACAAAGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR CCA 90 bp | TCACAGCAAAAGAGAGGCAGAGACACAGGATGTGGTTATGGAGAGCAAGTCTGTGGGTCTAGGTGCCAATaGAGGTCCAAAGAAGGTATA | + |
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Preference number: 2 (lower is better) Translates to: SQQKRGRDTGCGYGEQVCGSRCQ*RSKEGI Trigger: TATACCTTCTTTGGACCTCCATTGGCACCTAGACCC...ACAGACTTGCTCTCCATAACCACATCCTGTGTCTCTGCCTCTCTTTTGCTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAACTATAAATACATACACCCAAAGGCAAAGCCCAGAGCCAGGAGACAAATAGACTGTGGTGGCTTCTaGCATGCTCTGGTACTGGTT | + |
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Preference number: 2 (lower is better) Translates to: SNYKYIHPKAKPRARRQIDCGGF*HALVLV Trigger: AACCAGTACCAGAGCATGCCAGAAGCCACCACAGTC...TATTTGTCTCCTGGCTCTGGGCTTTGCCTTTGGGTGTATGTATTTATAGTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR GCA 90 bp | GCCACTTTGTGTGTAATACAGACACATAAGAGAATATCCATCCCACTTCCTCCATTCCACAAGGGGACTTaGCACTCACTCAGTACACAC | + |
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Preference number: 2 (lower is better) Translates to: ATLCVIQTHKRISIPLPPFHKGT*HSLSTH Trigger: GTGTGTACTGAGTGAGTGGCAAGTCCCCTTGTGGAA...TGGAGGAAGTGGGATGGATATTCTCTTATGTGTCTGTATTACACACAAAGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAAAGACCTCCAGTGGAAATCCAACAGGTGTATGGTATTCACAGCAAAAGAGGGCATGCTCTGGTACTaGTTTTATGAGCAATGTCAA | + |
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Preference number: 2 (lower is better) Translates to: GKDLQWKSNRCMVFTAKEGMLWY*FYEQCQ Trigger: TTGACATTGCTCATAAAACCAGTACCAGAGCATGCC...CTCTTTTGCTGTGAATACCATACACCTGTTGGATTTCCACTGGAGGTCTTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR TCA 90 bp | GCACTAGTAATGAATTGTGTGCCTTCACATTCTCCATGTCGATTTGATTCTGTCCTGGTACTGGTTTTATaGGCAATGTCAAGGGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: ALVMNCVPSHSPCRFDSVLVLVL*AMSRVP Trigger: TGGGACCCTTGACATTGCTCATAAAACCAGTACCAG...GACAGAATCAAATCGACATGGAGAATGTGAAGGCACACAATTCATTACTAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR TCA 90 bp | GCACTAGTAATGAATTGTGTGCCTTCACATTCTCCATGTCGATTTGATTCTGTCCAAAGGAGGGTAGATTaGTTTGCAGCACTTACACGG | + |
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Preference number: 2 (lower is better) Translates to: ALVMNCVPSHSPCRFDSVQRRVD*FAALTR Trigger: CCGTGTAAGTGCTGCAAATCAATCTACCCTCCTTTG...GACAGAATCAAATCGACATGGAGAATGTGAAGGCACACAATTCATTACTAGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR GCA 90 bp | ATATTTGAAGTCCTGTGTTATAATGAGAACCAAGAGCCCAGAGAGATGGGCGAGTACAAATCCAGGTTCTaGAAACAGAGACGAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: IFEVLCYNENQEPREMGEYKSRF*KQRREG Trigger: TCCTTCTCGTCTCTGTTTGCAGAACCTGGATTTGTA...CTCGCCCATCTCTCTGGGCTCTTGGTTCTCATTATAACACAGGACTTCAAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR GCA 90 bp | GCACTAGTAATGAATTGTGTGCCTTCACATTCTCCATGTCGATTTGATTCTGTCGCTGTTCCTGAAGTGTaGAAAACCCACAAGGCACAT | + |
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Preference number: 2 (lower is better) Translates to: ALVMNCVPSHSPCRFDSVAVPEV*KTHKAH Trigger: ATGTGCCTTGTGGGTTTTGCACACTTCAGGAACAGC...GACAGAATCAAATCGACATGGAGAATGTGAAGGCACACAATTCATTACTAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR CCA 90 bp | GCACTAGTAATGAATTGTGTGCCTTCACATTCTCCATGTCGATTTGATTCTGTCCAGAGACACAGGATGTaGTTATGGAGAGCAAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: ALVMNCVPSHSPCRFDSVQRHRM*LWRASL Trigger: CAGACTTGCTCTCCATAACCACATCCTGTGTCTCTG...GACAGAATCAAATCGACATGGAGAATGTGAAGGCACACAATTCATTACTAGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR CCA 90 bp | GCACTAGTAATGAATTGTGTGCCTTCACATTCTCCATGTCGATTTGATTCTGTCGGCAAAGACCTCCAGTaGAAATCCAACAGGTGTATG | + |
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Preference number: 2 (lower is better) Translates to: ALVMNCVPSHSPCRFDSVGKDLQ*KSNRCM Trigger: CATACACCTGTTGGATTTCCACTGGAGGTCTTTGCC...GACAGAATCAAATCGACATGGAGAATGTGAAGGCACACAATTCATTACTAGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR CAA 90 bp | AAGTTCATTCTTGACTACATACTGAGTTTGAGGCTCCTGGGATATTaGAAGTCCTGTGTTATAATGAGAACCAAGAGCCCAGAGAGATGG | + |
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Preference number: 2 (lower is better) Translates to: KFILDYILSLRLLGY*KSCVIMRTKSPERW Trigger: CCATCTCTCTGGGCTCTTGGTTCTCATTATAACACAGGACTTCAAATATCCCAGGAGCCTCAAACTCAGTATGTAGTCAAGAATGAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR GCA 90 bp | GCACTAGTAATGAATTGTGTGCCTTCACATTCTCCATGTCGATTTGATTCTGTCGATCCTGATCTGGAGTaGCATGATTGTCACAAATTA | + |
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Preference number: 2 (lower is better) Translates to: ALVMNCVPSHSPCRFDSVDPDLE*HDCHKL Trigger: TAATTTGTGACAATCATGGCACTCCAGATCAGGATC...GACAGAATCAAATCGACATGGAGAATGTGAAGGCACACAATTCATTACTAGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACTTTGTGTGTAATACAGACACATAAGAGAATATCCATCCCACTTCCTCCAGTCAGATTGACTACCTaGGAAAGCATGTTTATTTCT | + |
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Preference number: 2 (lower is better) Translates to: ATLCVIQTHKRISIPLPPVRLTT*ESMFIS Trigger: AGAAATAAACATGCTTTCCCAGGTAGTCAATCTGAC...TGGAGGAAGTGGGATGGATATTCTCTTATGTGTCTGTATTACACACAAAGTGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR TCA 90 bp | GCACTAGTAATGAATTGTGTGCCTTCACATTCTCCATGTCGATTTGATTCTGTCGTTCAAGTTCATTCTTaGCTACATACTGAGTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: ALVMNCVPSHSPCRFDSVVQVHS*LHTEFE Trigger: CTCAAACTCAGTATGTAGTCAAGAATGAACTTGAAC...GACAGAATCAAATCGACATGGAGAATGTGAAGGCACACAATTCATTACTAGTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR CCA 72 bp | GCAGGGACTGTGGTGGCTTCTGGCATGCTCTGGTACTaGTTTTATGAGCAATGTCAAGGGTCCCAGGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: AGTVVASGMLWY*FYEQCQGSQEG Trigger: CCCCTCCTGGGACCCTTGACATTGCTCATAAAACCAGTACCAGAGCATGCCAGAAGCCACCACAGTCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR CCA 72 bp | GTCACTGCAGGGACTGTGGTGGCTTCTGGCATGCTCTaGTACTGGTTTTATGAGCAATGTCAAGGGTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: VTAGTVVASGML*YWFYEQCQGSQ Trigger: CTGGGACCCTTGACATTGCTCATAAAACCAGTACCAGAGCATGCCAGAAGCCACCACAGTCCCTGCAGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR TCA 72 bp | TCAAGGGTCCCAGGAGGGGAAAAGGGTGCTTGTGAATaGAACACTTGGACCCAACAACAGCCTTCAGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: SRVPGGEKGACE*NTWTQQQPSEP Trigger: TGGCTCTGAAGGCTGTTGTTGGGTCCAAGTGTTTCATTCACAAGCACCCTTTTCCCCTCCTGGGACCCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR GCA 72 bp | GTGAGATTGGCAGTGAGAATGGCTGTTCCTGAAGTGTaGAAAACCCACAAGGCACATCTGAGAATCGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: VRLAVRMAVPEV*KTHKAHLRIVV Trigger: CACCACGATTCTCAGATGTGCCTTGTGGGTTTTGCACACTTCAGGAACAGCCATTCTCACTGCCAATCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR GCA 72 bp | AAAATGTCACTGCAGGGACTGTGGTGGCTTCTGGCATaGTCTGGTACTGGTTTTATGAGCAATGTCAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: KMSLQGLWWLLA*SGTGFMSNVKG Trigger: ACCCTTGACATTGCTCATAAAACCAGTACCAGAGCATGCCAGAAGCCACCACAGTCCCTGCAGTGACATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR GCA 72 bp | CTGGCTGGACATCTCCTTGTGTACAAATCCAGGTTCTaGAAACAGAGACGAGAAGGAGAGAGTGACTGTCTA | + |
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Preference number: 3 (lower is better) Translates to: LAGHLLVYKSRF*KQRREGESDCL Trigger: TAGACAGTCACTCTCTCCTTCTCGTCTCTGTTTGCAGAACCTGGATTTGTACACAAGGAGATGTCCAGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR CAA 90 bp | TCCAACTATAAATACATACACCCAAAGGCAAAGCCCAGAGCCAGGAGACAAATATGGGAGACAGTGAGATaGGCAGTGAGAATGGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: SNYKYIHPKAKPRARRQIWETVR*AVRMAV Trigger: AACAGCCATTCTCACTGCCAATCTCACTGTCTCCCA...TATTTGTCTCCTGGCTCTGGGCTTTGCCTTTGGGTGTATGTATTTATAGTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR CCA 72 bp | GAATACATTGGAGATAAAATGTCACTGCAGGGACTGTaGTGGCTTCTGGCATGCTCTGGTACTGGTTTTATG | + |
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Preference number: 3 (lower is better) Translates to: EYIGDKMSLQGL*WLLACSGTGFM Trigger: CATAAAACCAGTACCAGAGCATGCCAGAAGCCACCACAGTCCCTGCAGTGACATTTTATCTCCAATGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR-3UTR CAA 90 bp | GCCACTTTGTGTGTAATACAGACACATAAGAGAATATCCATCCCACTTCCTCCAAATGAGCACCACACTTaGAAAGCTGAAGCAGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: ATLCVIQTHKRISIPLPPNEHHT*KAEAGK Trigger: TTTTCCTGCTTCAGCTTTCAAAGTGTGGTGCTCATT...TGGAGGAAGTGGGATGGATATTCTCTTATGTGTCTGTATTACACACAAAGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR CAA 72 bp | AGGGTGCCAATCAGCCCCAGCTGGCTGGACATCTCCTaGTGTACAAATCCAGGTTCTGCAAACAGAGACGAG | + |
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Preference number: 4 (lower is better) Translates to: RVPISPSWLDIS*CTNPGSANRDE Trigger: CTCGTCTCTGTTTGCAGAACCTGGATTTGTACACAAGGAGATGTCCAGCCAGCTGGGGCTGATTGGCACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| CDS-3UTR TCA 90 bp | AAAAGGGTGCTTGTGAATGAAACACTTGGACCCAACAACAGCCTTCAGAGCCACCATAGATCAGTGGTCTaGGGATGGCCAGGCACCGGT | + |
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Preference number: 4 (lower is better) Translates to: KRVLVNETLGPNNSLQSHHRSVV*GWPGTG Trigger: ACCGGTGCCTGGCCATCCTCAGACCACTGATCTATG...GTGGCTCTGAAGGCTGTTGTTGGGTCCAAGTGTTTCATTCACAAGCACCCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| CDS-3UTR TCA 90 bp | CAGGGACTGTGGTGGCTTCTGGCATGCTCTGGTACTGGTTTTATGAGCAATGTCTTCCATAAAACAAGATaGCCGTGGTCAGGTGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: QGLWWLLACSGTGFMSNVFHKTR*PWSGER Trigger: CCTCTCACCTGACCACGGTCATCTTGTTTTATGGAA...GACATTGCTCATAAAACCAGTACCAGAGCATGCCAGAAGCCACCACAGTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| CDS-3UTR TCA 90 bp | TCACAGCAAAAGAGAGGCAGAGACACAGGATGTGGTTATGGAGAGCAAGTCTGTCATAAGCCATGGCCGTaGGCAGAAAGCATTCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: SQQKRGRDTGCGYGEQVCHKPWP*AESIQY Trigger: GTACTGAATGCTTTCTGCTCACGGCCATGGCTTATG...ACAGACTTGCTCTCCATAACCACATCCTGTGTCTCTGCCTCTCTTTTGCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| CDS-3UTR TCA 90 bp | TCACAGCAAAAGAGAGGCAGAGACACAGGATGTGGTTATGGAGAGCAAGTCTGTTCTACTGAGGGGATGTaGAGAACTGTGGCCACAATG | + |
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Preference number: 4 (lower is better) Translates to: SQQKRGRDTGCGYGEQVCSTEGM*RTVATM Trigger: CATTGTGGCCACAGTTCTTCACATCCCCTCAGTAGA...ACAGACTTGCTCTCCATAACCACATCCTGTGTCTCTGCCTCTCTTTTGCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| CDS-3UTR TCA 90 bp | GTAAGTGCACATGGGTCTAGGTGCCAATGGAGGTCCAAAGAAGGTATAGAATACAAATGTATGGAAGGCTaGGTAGATAGCCCCACCCAC | + |
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Preference number: 4 (lower is better) Translates to: VSAHGSRCQWRSKEGIEYKCMEG*VDSPTH Trigger: GTGGGTGGGGCTATCTACTCAGCCTTCCATACATTT...GTATTCTATACCTTCTTTGGACCTCCATTGGCACCTAGACCCATGTGCACTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| CDS-3UTR TCA 90 bp | GCACTAGTAATGAATTGTGTGCCTTCACATTCTCCATGTCGATTTGATTCTGTCAGCCCACCTCCTCATTaGGATGGTAATCAGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ALVMNCVPSHSPCRFDSVSPPPH*DGNQCR Trigger: CCTGCACTGATTACCATCTCAATGAGGAGGTGGGCT...GACAGAATCAAATCGACATGGAGAATGTGAAGGCACACAATTCATTACTAGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| CDS-3UTR TCA 90 bp | TCACAGCAAAAGAGAGGCAGAGACACAGGATGTGGTTATGGAGAGCAAGTCTGTAATATTTGTGGCTCATaGTGGTTCCATAGATCAGTG | + |
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Preference number: 4 (lower is better) Translates to: SQQKRGRDTGCGYGEQVCNICGS*WFHRSV Trigger: CACTGATCTATGGAACCATCATGAGCCACAAATATT...ACAGACTTGCTCTCCATAACCACATCCTGTGTCTCTGCCTCTCTTTTGCTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| CDS-3UTR CCA 90 bp | GGCAAAGACCTCCAGTGGAAATCCAACAGGTGTATGGTATTCACAGCAAAAGAGCAGACAATAGATAACTaGATTAAGAGATGGTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: GKDLQWKSNRCMVFTAKEQTIDN*IKRWCD Trigger: GTCACACCATCTCTTAATCCAGTTATCTATTGTCTG...CTCTTTTGCTGTGAATACCATACACCTGTTGGATTTCCACTGGAGGTCTTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| 3UTR CAA 72 bp | AAAAAGTTCAAGTTCATTCTTGACTACATACTGAGTTaGAGGCTCCTGGGATATTTGAAGTCCTGTGTTATA | + |
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Preference number: 4 (lower is better) Translates to: KKFKFILDYILS*RLLGYLKSCVI Trigger: TATAACACAGGACTTCAAATATCCCAGGAGCCTCAAACTCAGTATGTAGTCAAGAATGAACTTGAACTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216473.2 |
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| CDS TCA 90 bp | GGGTCCACAGTAGGGGAGGGAGAAGGTGTTAAATGTATGGAAGGCTaGGTAGATAGCCCCACCCACCCAGGCAGTGACCACCAATGCAGA | + |
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Preference number: 5 (lower is better) Translates to: GSTVGEGEGVKCMEG*VDSPTHPGSDHQCR Trigger: TCTGCATTGGTGGTCACTGCCTGGGTGGGTGGGGCTATCTACTCAGCCTTCCATACATTTAACACCTTCTCCCTCCCCTACTGTGGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071625.2 ENSMUST00000216473.2 |
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| CDS TCA 72 bp | GTAGGGGAGGGAGAAGGTGTTAAATGTATGGAAGGCTaGGTAGATAGCCCCACCCACCCAGGCAGTGACCAC | + |
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Preference number: 6 (lower is better) Translates to: VGEGEGVKCMEG*VDSPTHPGSDH Trigger: GTGGTCACTGCCTGGGTGGGTGGGGCTATCTACTCAGCCTTCCATACATTTAACACCTTCTCCCTCCCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071625.2 ENSMUST00000216473.2 |
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| CDS GCA 72 bp | GTAGATAGCCCCACCCACCCAGGCAGTGACCACCAATaGAGAACAATATTTGTGGCTCATGATGGTTCCATA | + |
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Preference number: 6 (lower is better) Translates to: VDSPTHPGSDHQ*RTIFVAHDGSI Trigger: TATGGAACCATCATGAGCCACAAATATTGTTCTGCATTGGTGGTCACTGCCTGGGTGGGTGGGGCTATCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071625.2 ENSMUST00000216473.2 |
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| CDS TCA 72 bp | GGATGCCGAAAGTGTAAAAGAGCAAGAAAAATGGGATaGGCACCAATCTCAGCTGTGGGACATCTGAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: GCRKCKRARKMG*APISAVGHLRS Trigger: GCTTCTCAGATGTCCCACAGCTGAGATTGGTGCTCATCCCATTTTTCTTGCTCTTTTACACTTTCGGCATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071625.2 ENSMUST00000216473.2 |
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