Pregenerated sensors for OLFR308 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054498Ensembl transcript IDs: ENSMUST00000044256.6, ENSMUST00000214977.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAACAAAGAGTACACACAAGGGGACCCATGGCTCCAGCTGGACATaGAGCAGAGGATTGCCTTATCTGCCATCAAAGGGAAGGAAGCCC | + |
|
Preference number: 1 (lower is better) Translates to: QTKSTHKGTHGSSWT*SRGLPYLPSKGRKP Trigger: GGGCTTCCTTCCCTTTGATGGCAGATAAGGCAATCCTCTGCTCCATGTCCAGCTGGAGCCATGGGTCCCCTTGTGTGTACTCTTTGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR CCA 90 bp | ACAACCCAAACAAAGAGTACACACAAGGGGACCCATGGCTCCAGCTaGACATGGAGCAGAGGATTGCCTTATCTGCCATCAAAGGGAAGG | + |
|
Preference number: 1 (lower is better) Translates to: TTQTKSTHKGTHGSS*TWSRGLPYLPSKGR Trigger: CCTTCCCTTTGATGGCAGATAAGGCAATCCTCTGCTCCATGTCCAGCTGGAGCCATGGGTCCCCTTGTGTGTACTCTTTGTTTGGGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR TCA 90 bp | ATACTTAATAGATGGTCTCCTGGCACTAAAGTTCCTCCAGTCTCATaGCATCCTGAGTGGTTTCTAAAAACAAATGGCATATGGCATTTC | + |
|
Preference number: 1 (lower is better) Translates to: ILNRWSPGTKVPPVS*HPEWFLKTNGIWHF Trigger: GAAATGCCATATGCCATTTGTTTTTAGAAACCACTCAGGATGTCATGAGACTGGAGGAACTTTAGTGCCAGGAGACCATCTATTAAGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR TCA 90 bp | TATGAAAGATTGTTAGTAATAGTAGCCTATTTAATGATTAAGCCATaGTGGCACCAAAGCAATGAGAAGCCAGCCTGGACTCCACAGTCA | + |
|
Preference number: 1 (lower is better) Translates to: YERLLVIVAYLMIKP*WHQSNEKPAWTPQS Trigger: TGACTGTGGAGTCCAGGCTGGCTTCTCATTGCTTTGGTGCCATCATGGCTTAATCATTAAATAGGCTACTATTACTAACAATCTTTCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR CAA 90 bp | ACACACAAGGGGACCCATGGCTCCAGCTGGACATGGAGCAGAGGATaGCCTTATCTGCCATCAAAGGGAAGGAAGCCCCTTGGTCCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: THKGTHGSSWTWSRG*PYLPSKGRKPLGPV Trigger: TACAGGACCAAGGGGCTTCCTTCCCTTTGATGGCAGATAAGGCAATCCTCTGCTCCATGTCCAGCTGGAGCCATGGGTCCCCTTGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR-3UTR TCA 90 bp | AATGAGAAGCCAGCCTGGACTCCACAGTCAGAGCATTTCTCAAAAACCAACAACGTTCCTCCAGTCTCATaGCATCCTGAGTGGTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: NEKPAWTPQSEHFSKTNNVPPVS*HPEWFL Trigger: TAGAAACCACTCAGGATGTCATGAGACTGGAGGAAC...GTTGTTGGTTTTTGAGAAATGCTCTGACTGTGGAGTCCAGGCTGGCTTCTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAAAGACACAACCCAAACAAAGAGTACACACAAGGGGACCCATGGCTCCAGCTGTCTGTCAGACAAATTaGCAACCTACAGAATGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: QKTQPKQRVHTRGPMAPAVCQTN*QPTEWR Trigger: TCTCCATTCTGTAGGTTGGCAATTTGTCTGACAGAC...AGCTGGAGCCATGGGTCCCCTTGTGTGTACTCTTTGTTTGGGTTGTGTCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGACTCCAAATAAATTCACATATTGCAGCCTGAACAAAACTCAACTCAAAATGAGAAGTAGGAGTGGGTaGGCTGGTCGGGGAGTACCC | + |
|
Preference number: 2 (lower is better) Translates to: ETPNKFTYCSLNKTQLKMRSRSG*AGRGVP Trigger: GGGTACTCCCCGACCAGCCCACCCACTCCTACTTCT...CATTTTGAGTTGAGTTTTGTTCAGGCTGCAATATGTGAATTTATTTGGAGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAAAGACACAACCCAAACAAAGAGTACACACAAGGGGACCCATGGCTCCAGCTGCTTTATCTGCATTTTaGCAGAAATACTTTGGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: QKTQPKQRVHTRGPMAPAALSAF*QKYFGF Trigger: GAAGCCAAAGTATTTCTGCCAAAATGCAGATAAAGC...AGCTGGAGCCATGGGTCCCCTTGTGTGTACTCTTTGTTTGGGTTGTGTCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR CAA 90 bp | CAGAAGCATGCACTGAGAACAAGACAGGATCTTGAAACAGTGGTGTaGCTCAAACTGGGTGACTATAGGTTGGAGACTCCAAATAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: QKHALRTRQDLETVV*LKLGDYRLETPNKF Trigger: GAATTTATTTGGAGTCTCCAACCTATAGTCACCCAGTTTGAGCAACACCACTGTTTCAAGATCCTGTCTTGTTCTCAGTGCATGCTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAAAGACACAACCCAAACAAAGAGTACACACAAGGGGACCCATGGCTCCAGCTAGAATACTTAATAGATaGTCTCCTGGCACTAAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: QKTQPKQRVHTRGPMAPARILNR*SPGTKV Trigger: AACTTTAGTGCCAGGAGACCATCTATTAAGTATTCT...AGCTGGAGCCATGGGTCCCCTTGTGTGTACTCTTTGTTTGGGTTGTGTCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR-3UTR GCA 90 bp | AATGAGAAGCCAGCCTGGACTCCACAGTCAGAGCATTTCTCAAAAACCAACAACTGCACCTGCTTTATCTaGATTTTGGCAGAAATACTT | + |
|
Preference number: 2 (lower is better) Translates to: NEKPAWTPQSEHFSKTNNCTCFI*ILAEIL Trigger: AAGTATTTCTGCCAAAATGCAGATAAAGCAGGTGCA...GTTGTTGGTTTTTGAGAAATGCTCTGACTGTGGAGTCCAGGCTGGCTTCTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGACTCCAAATAAATTCACATATTGCAGCCTGAACAAAACTCAACTCAAAATGAATGAGAAGCCAGCCTaGACTCCACAGTCAGAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: ETPNKFTYCSLNKTQLKMNEKPA*TPQSEH Trigger: ATGCTCTGACTGTGGAGTCCAGGCTGGCTTCTCATT...CATTTTGAGTTGAGTTTTGTTCAGGCTGCAATATGTGAATTTATTTGGAGTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAACAACAAAAACTGGAGTCACTCGCACAACTCTTCTGAAAGTAAATAAAGCCGTGATGGGTACTATATaGAATATGTCCATGCTATTC | + |
|
Preference number: 2 (lower is better) Translates to: PTTKTGVTRTTLLKVNKAVMGTI*NMSMLF Trigger: GAATAGCATGGACATATTGCATATAGTACCCATCAC...GGCTTTATTTACTTTCAGAAGAGTTGTGCGAGTGACTCCAGTTTTTGTTGTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAACAACAAAAACTGGAGTCACTCGCACAACTCTTCTGAAAGTAAATAAAGCCAAGTTTACATGCACCTaGTTTATCTGCATTTTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: PTTKTGVTRTTLLKVNKAKFTCT*FICILA Trigger: TGCCAAAATGCAGATAAAGCAGGTGCATGTAAACTT...GGCTTTATTTACTTTCAGAAGAGTTGTGCGAGTGACTCCAGTTTTTGTTGTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR CCA 72 bp | GCTAGGGAAATGCTAGGGTTCAGAAGTAGGAGTGGGTaGGCTGGTCGGGGAGTACCCTCAACCCTCAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: AREMLGFRSRSG*AGRGVPSTLRG Trigger: TCCCCTGAGGGTTGAGGGTACTCCCCGACCAGCCCACCCACTCCTACTTCTGAACCCTAGCATTTCCCTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR CCA 72 bp | AGTACACACAAGGGGACCCATGGCTCCAGCTGGACATaGAGCAGAGGATTGCCTTATCTGCCATCAAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: STHKGTHGSSWT*SRGLPYLPSKG Trigger: TCCCTTTGATGGCAGATAAGGCAATCCTCTGCTCCATGTCCAGCTGGAGCCATGGGTCCCCTTGTGTGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR CCA 72 bp | ACAAAGAGTACACACAAGGGGACCCATGGCTCCAGCTaGACATGGAGCAGAGGATTGCCTTATCTGCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: TKSTHKGTHGSS*TWSRGLPYLPS Trigger: TGATGGCAGATAAGGCAATCCTCTGCTCCATGTCCAGCTGGAGCCATGGGTCCCCTTGTGTGTACTCTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR CCA 72 bp | CACAACCCAAACAAAGAGTACACACAAGGGGACCCATaGCTCCAGCTGGACATGGAGCAGAGGATTGCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: HNPNKEYTQGDP*LQLDMEQRIAL Trigger: TAAGGCAATCCTCTGCTCCATGTCCAGCTGGAGCCATGGGTCCCCTTGTGTGTACTCTTTGTTTGGGTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAAGACACAACCCAAACAAAGAGTACACACAAGGGGACCCATGGCTCCAGCTACATGGAGCAGAGGATaGCCTTATCTGCCATCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QKTQPKQRVHTRGPMAPATWSRG*PYLPSK Trigger: CTTTGATGGCAGATAAGGCAATCCTCTGCTCCATGT...AGCTGGAGCCATGGGTCCCCTTGTGTGTACTCTTTGTTTGGGTTGTGTCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR TCA 72 bp | TTGTTAGTAATAGTAGCCTATTTAATGATTAAGCCATaGTGGCACCAAAGCAATGAGAAGCCAGCCTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: LLVIVAYLMIKP*WHQSNEKPAWT Trigger: AGTCCAGGCTGGCTTCTCATTGCTTTGGTGCCATCATGGCTTAATCATTAAATAGGCTACTATTACTAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAACAACAAAAACTGGAGTCACTCGCACAACTCTTCTGAAAGTAAATAAAGCCTGCTTTATCTGCATTTaGGCAGAAATACTTTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PTTKTGVTRTTLLKVNKACFICI*AEILWL Trigger: AAGCCAAAGTATTTCTGCCAAAATGCAGATAAAGCA...GGCTTTATTTACTTTCAGAAGAGTTGTGCGAGTGACTCCAGTTTTTGTTGTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| 3UTR TCA 72 bp | AAATGGCATATGGCATTTCTTTTAGATAGAGGCATATaGCATTTCATTGTCCTGTTCTTATTGCAGATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: KWHMAFLLDRGI*HFIVLFLLQMH Trigger: GTGCATCTGCAATAAGAACAGGACAATGAAATGTCATATGCCTCTATCTAAAAGAAATGCCATATGCCATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR CCA 90 bp | AATGAGAAGCCAGCCTGGACTCCACAGTCAGAGCATTTCTCAAAAACCAACAACCCACTCCCTGTGTACTaGTACAGGCCAGGGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: NEKPAWTPQSEHFSKTNNPLPVY*YRPGQS Trigger: GGATTGCCCTGGCCTGTACCAGTACACAGGGAGTGG...GTTGTTGGTTTTTGAGAAATGCTCTGACTGTGGAGTCCAGGCTGGCTTCTCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR TCA 90 bp | AATGAGAAGCCAGCCTGGACTCCACAGTCAGAGCATTTCTCAAAAACCAACAACGAAAACTGGAGGACCTaGGATCCAGGGAAGCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: NEKPAWTPQSEHFSKTNNENWRT*DPGKPK Trigger: CTTAGGCTTCCCTGGATCTCAGGTCCTCCAGTTTTC...GTTGTTGGTTTTTGAGAAATGCTCTGACTGTGGAGTCCAGGCTGGCTTCTCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAGACACAACCCAAACAAAGAGTACACACAAGGGGACCCATGGCTCCAGCTAATGGCCAGAGCTTTTaGGACTGCAGCTGTTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QKTQPKQRVHTRGPMAPANGQSF*DCSCCV Trigger: TACACAACAGCTGCAGTCCCAAAAGCTCTGGCCATT...AGCTGGAGCCATGGGTCCCCTTGTGTGTACTCTTTGTTTGGGTTGTGTCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR TCA 90 bp | AATGAGAAGCCAGCCTGGACTCCACAGTCAGAGCATTTCTCAAAAACCAACAACAAGAGCCAGCTGTGCTaGGAGCAGACTGTTCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: NEKPAWTPQSEHFSKTNNKSQLC*EQTVHN Trigger: ATTATGAACAGTCTGCTCTCAGCACAGCTGGCTCTT...GTTGTTGGTTTTTGAGAAATGCTCTGACTGTGGAGTCCAGGCTGGCTTCTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR GCA 90 bp | AATGAGAAGCCAGCCTGGACTCCACAGTCAGAGCATTTCTCAAAAACCAACAACCAGAGCTTTTGGGACTaGAGCTGTTGTGTACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NEKPAWTPQSEHFSKTNNQSFWD*SCCVPD Trigger: ATCTGGTACACAACAGCTGCAGTCCCAAAAGCTCTG...GTTGTTGGTTTTTGAGAAATGCTCTGACTGTGGAGTCCAGGCTGGCTTCTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR TCA 90 bp | AATGAGAAGCCAGCCTGGACTCCACAGTCAGAGCATTTCTCAAAAACCAACAACTCCCTAGAATTTCTCTaGCCTCCTTGTTACGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NEKPAWTPQSEHFSKTNNSLEFL*PPCYEE Trigger: CTCTTCGTAACAAGGAGGTCAGAGAAATTCTAGGGA...GTTGTTGGTTTTTGAGAAATGCTCTGACTGTGGAGTCCAGGCTGGCTTCTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR GCA 90 bp | CCAACAACAAAAACTGGAGTCACTCGCACAACTCTTCTGAAAGTAAATAAAGCCCAAGGTGCTGATGAGTaGTGCTGGCACAGAAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTTKTGVTRTTLLKVNKAQGADE*CWHRNG Trigger: GCCATTTCTGTGCCAGCAGCACTCATCAGCACCTTG...GGCTTTATTTACTTTCAGAAGAGTTGTGCGAGTGACTCCAGTTTTTGTTGTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR CCA 90 bp | AATGAGAAGCCAGCCTGGACTCCACAGTCAGAGCATTTCTCAAAAACCAACAACGTAGAGGAAAACAGATaGCAAGGTAGCGGTCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: NEKPAWTPQSEHFSKTNNVEENR*QGSGHK Trigger: CTTATGACCGCTACCTTGCCATCTGTTTTCCTCTAC...GTTGTTGGTTTTTGAGAAATGCTCTGACTGTGGAGTCCAGGCTGGCTTCTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR TCA 90 bp | AATGAGAAGCCAGCCTGGACTCCACAGTCAGAGCATTTCTCAAAAACCAACAACAAGACACCCCAAAAATaGTATGGATTGACTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NEKPAWTPQSEHFSKTNNKTPQK*YGLTLP Trigger: GGGAAGAGTCAATCCATATCATTTTTGGGGTGTCTT...GTTGTTGGTTTTTGAGAAATGCTCTGACTGTGGAGTCCAGGCTGGCTTCTCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR GCA 90 bp | GAGACTCCAAATAAATTCACATATTGCAGCCTGAACAAAACTCAACTCAAAATGGGTGCTGATGAGTGCTaGTGGCACAGAAATGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETPNKFTYCSLNKTQLKMGADEC*WHRNGQ Trigger: CTGGCCATTTCTGTGCCAGCAGCACTCATCAGCACC...CATTTTGAGTTGAGTTTTGTTCAGGCTGCAATATGTGAATTTATTTGGAGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR CCA 90 bp | GAGACTCCAAATAAATTCACATATTGCAGCCTGAACAAAACTCAACTCAAAATGTCTTCCCCACCAGAATaGCCAGAGCTTTTGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: ETPNKFTYCSLNKTQLKMSSPPE*PELLGL Trigger: CAGTCCCAAAAGCTCTGGCCATTCTGGTGGGGAAGA...CATTTTGAGTTGAGTTTTGTTCAGGCTGCAATATGTGAATTTATTTGGAGTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR TCA 90 bp | CCAACAACAAAAACTGGAGTCACTCGCACAACTCTTCTGAAAGTAAATAAAGCCACTGTATTCAGGACATaGACTGCTTTAGTCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTTKTGVTRTTLLKVNKATVFRT*TALVSC Trigger: GCAACTGACTAAAGCAGTTCATGTCCTGAATACAGT...GGCTTTATTTACTTTCAGAAGAGTTGTGCGAGTGACTCCAGTTTTTGTTGTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR CCA 90 bp | CCAACAACAAAAACTGGAGTCACTCGCACAACTCTTCTGAAAGTAAATAAAGCCAAGAGAAGGAAGTCTTaGGCTAGAGTCCAATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTTKTGVTRTTLLKVNKAKRRKS*ARVQFS Trigger: AGAGAATTGGACTCTAGCCCAAGACTTCCTTCTCTT...GGCTTTATTTACTTTCAGAAGAGTTGTGCGAGTGACTCCAGTTTTTGTTGTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR GCA 90 bp | CCAACAACAAAAACTGGAGTCACTCGCACAACTCTTCTGAAAGTAAATAAAGCCAGAGGAAGTATTCTGTaGAACCTAATGAGAAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: PTTKTGVTRTTLLKVNKARGSIL*NLMRKP Trigger: TGGTTTTCTCATTAGGTTGCACAGAATACTTCCTCT...GGCTTTATTTACTTTCAGAAGAGTTGTGCGAGTGACTCCAGTTTTTGTTGTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR CCA 90 bp | CCAACAACAAAAACTGGAGTCACTCGCACAACTCTTCTGAAAGTAAATAAAGCCATGGATGTTCGAACATaGAGGAAAATTGTAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTTKTGVTRTTLLKVNKAMDVRT*RKIVDP Trigger: TGGATCTACAATTTTCCTCCATGTTCGAACATCCAT...GGCTTTATTTACTTTCAGAAGAGTTGTGCGAGTGACTCCAGTTTTTGTTGTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR CCA 90 bp | GAGACTCCAAATAAATTCACATATTGCAGCCTGAACAAAACTCAACTCAAAATGTCAGAAAGAAATACATaGGCGTCTGTAACTGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ETPNKFTYCSLNKTQLKMSERNT*ASVTGV Trigger: CACACCAGTTACAGACGCCCATGTATTTCTTTCTGA...CATTTTGAGTTGAGTTTTGTTCAGGCTGCAATATGTGAATTTATTTGGAGTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR GCA 90 bp | GAGACTCCAAATAAATTCACATATTGCAGCCTGAACAAAACTCAACTCAAAATGCAGTATAACCACAAATaGAATCACAAAAGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ETPNKFTYCSLNKTQLKMQYNHK*NHKSHC Trigger: ACAGTGGCTTTTGTGATTGCATTTGTGGTTATACTG...CATTTTGAGTTGAGTTTTGTTCAGGCTGCAATATGTGAATTTATTTGGAGTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR GCA 90 bp | GAGACTCCAAATAAATTCACATATTGCAGCCTGAACAAAACTCAACTCAAAATGATTCAGGACATGAACTaGTTTAGTCAGTTGCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: ETPNKFTYCSLNKTQLKMIQDMN*FSQLQI Trigger: GATTTGCAACTGACTAAAGCAGTTCATGTCCTGAAT...CATTTTGAGTTGAGTTTTGTTCAGGCTGCAATATGTGAATTTATTTGGAGTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR GCA 90 bp | GAGACTCCAAATAAATTCACATATTGCAGCCTGAACAAAACTCAACTCAAAATGACTGCTTTAGTCAGTTaGAAATCATCTTTGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ETPNKFTYCSLNKTQLKMTALVS*KSSLMD Trigger: ATCCATCAAAGATGATTTGCAACTGACTAAAGCAGT...CATTTTGAGTTGAGTTTTGTTCAGGCTGCAATATGTGAATTTATTTGGAGTCTC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS CCA 90 bp | GATAGCATGGGTGCCACAGAAGGACAAGGTGCTGATGAGTGCTGCTaGCACAGAAATGGCCAGGAAACCACAAATCCAGGAGCTAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: DSMGATEGQGADECC*HRNGQETTNPGAKS Trigger: GCTCTTAGCTCCTGGATTTGTGGTTTCCTGGCCATTTCTGTGCCAGCAGCACTCATCAGCACCTTGTCCTTCTGTGGCACCCATGCTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044256.6 ENSMUST00000214977.2 |
||
| CDS GCA 90 bp | ATTGATAGCATGGGTGCCACAGAAGGACAAGGTGCTGATGAGTGCTaGTGGCACAGAAATGGCCAGGAAACCACAAATCCAGGAGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: IDSMGATEGQGADEC*WHRNGQETTNPGAK Trigger: CTTAGCTCCTGGATTTGTGGTTTCCTGGCCATTTCTGTGCCAGCAGCACTCATCAGCACCTTGTCCTTCTGTGGCACCCATGCTATCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044256.6 ENSMUST00000214977.2 |
||
| CDS-3UTR CAA 90 bp | CCAACAACAAAAACTGGAGTCACTCGCACAACTCTTCTGAAAGTAAATAAAGCCGAATGGCCAGAGCTTTaGGGACTGCAGCTGTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PTTKTGVTRTTLLKVNKAEWPEL*GLQLLC Trigger: ACACAACAGCTGCAGTCCCAAAAGCTCTGGCCATTC...GGCTTTATTTACTTTCAGAAGAGTTGTGCGAGTGACTCCAGTTTTTGTTGTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR CAA 90 bp | CCAACAACAAAAACTGGAGTCACTCGCACAACTCTTCTGAAAGTAAATAAAGCCTTCTGCGACCACTGGTaGAAGGGATCCTCAGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: PTTKTGVTRTTLLKVNKAFCDHW*KGSSEW Trigger: CCATTCTGAGGATCCCTTCAACCAGTGGTCGCAGAA...GGCTTTATTTACTTTCAGAAGAGTTGTGCGAGTGACTCCAGTTTTTGTTGTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS-3UTR CAA 90 bp | GAGACTCCAAATAAATTCACATATTGCAGCCTGAACAAAACTCAACTCAAAATGAACTGCTTTAGTCAGTaGCAAATCATCTTTGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: ETPNKFTYCSLNKTQLKMNCFSQ*QIIFDG Trigger: TCCATCAAAGATGATTTGCAACTGACTAAAGCAGTT...CATTTTGAGTTGAGTTTTGTTCAGGCTGCAATATGTGAATTTATTTGGAGTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214977.2 |
||
| CDS GCA 72 bp | ATGGGTGCCACAGAAGGACAAGGTGCTGATGAGTGCTaGTGGCACAGAAATGGCCAGGAAACCACAAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: MGATEGQGADEC*WHRNGQETTNP Trigger: TGGATTTGTGGTTTCCTGGCCATTTCTGTGCCAGCAGCACTCATCAGCACCTTGTCCTTCTGTGGCACCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044256.6 ENSMUST00000214977.2 |
||
| CDS CAA 72 bp | CACCACTGTATTCAGGACATGAACTGCTTTAGTCAGTaGCAAATCATCTTTGATGGATGTTCGAACATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HHCIQDMNCFSQ*QIIFDGCSNME Trigger: CTCCATGTTCGAACATCCATCAAAGATGATTTGCAACTGACTAAAGCAGTTCATGTCCTGAATACAGTGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044256.6 ENSMUST00000214977.2 |
||
| CDS CAA 90 bp | AGCTGGAGTCACCACTGTATTCAGGACATGAACTGCTTTAGTCAGTaGCAAATCATCTTTGATGGATGTTCGAACATGGAGGAAAATTGT | + |
|
Preference number: 6 (lower is better) Translates to: SWSHHCIQDMNCFSQ*QIIFDGCSNMEENC Trigger: ACAATTTTCCTCCATGTTCGAACATCCATCAAAGATGATTTGCAACTGACTAAAGCAGTTCATGTCCTGAATACAGTGGTGACTCCAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044256.6 ENSMUST00000214977.2 |
||