Pregenerated sensors for OLFR307 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055610Ensembl transcript IDs: ENSMUST00000069279.5, ENSMUST00000213705.2, ENSMUST00000217494.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGCTAACATGTAAGATCCCTTCCATCAAGAAACCAGATGGCCTGTaGGTCTTTCTTTGGAATTTTTATACAGGTCACAGTTCCCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: WLTCKIPSIKKPDGL*VFLWNFYTGHSSQS Trigger: GCTCTGGGAACTGTGACCTGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGAAGGGATCTTACATGTTAGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR TCA 90 bp | AGCTCAACTAGCCAGAGAAGCATATCACAATCAGTGGACAGAAGTTaGCTTACAGAAAACATACCACACATTCTCAAAAGGATGGCACCC | + |
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Preference number: 1 (lower is better) Translates to: SSTSQRSISQSVDRS*LTENIPHILKRMAP Trigger: GGGTGCCATCCTTTTGAGAATGTGTGGTATGTTTTCTGTAAGTCAACTTCTGTCCACTGATTGTGATATGCTTCTCTGGCTAGTTGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR GCA 90 bp | AATCGAGCTATATCTGGAGAGACAGCCAAAATCTTTGTATCTCTGTaGTTGACACCTTGTGGCCACGTTATGACTCATTTACAAGCCACA | + |
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Preference number: 1 (lower is better) Translates to: NRAISGETAKIFVSL*LTPCGHVMTHLQAT Trigger: TGTGGCTTGTAAATGAGTCATAACGTGGCCACAAGGTGTCAAGCACAGAGATACAAAGATTTTGGCTGTCTCTCCAGATATAGCTCGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR CCA 90 bp | TGTTTATCTGGGAATTCTCTGCACCGCTCTTCTGATGCAATGCTATaGATAAGGGTAAATCTCCAGAATGCACTGGATTTAGTCTATTGC | + |
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Preference number: 1 (lower is better) Translates to: CLSGNSLHRSSDAML*IRVNLQNALDLVYC Trigger: GCAATAGACTAAATCCAGTGCATTCTGGAGATTTACCCTTATCCATAGCATTGCATCAGAAGAGCGGTGCAGAGAATTCCCAGATAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR CCA 90 bp | TCTTTAAGATTGAAATGCACTTTGAGGATGGAATCGAGCTATATCTaGAGAGACAGCCAAAATCTTTGTATCTCTGTGCTTGACACCTTG | + |
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Preference number: 1 (lower is better) Translates to: SLRLKCTLRMESSYI*RDSQNLCISVLDTL Trigger: CAAGGTGTCAAGCACAGAGATACAAAGATTTTGGCTGTCTCTCCAGATATAGCTCGATTCCATCCTCAAAGTGCATTTCAATCTTAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGGTCTTTCTTTGGAATTTTTATACAGGTCACAGTTCCCAGAGCTCATCATTTCTGCACCGCTCTTCTaGTGCAATGCTATGGATAAG | + |
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Preference number: 2 (lower is better) Translates to: VGLSLEFLYRSQFPELIISAPLF*CNAMDK Trigger: CTTATCCATAGCATTGCATCAGAAGAGCGGTGCAGA...AATGATGAGCTCTGGGAACTGTGACCTGTATAAAAATTCCAAAGAAAGACCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGGTCTTTCTTTGGAATTTTTATACAGGTCACAGTTCCCAGAGCTCATCATTTTGTATCTCTGTGCTTaGCACCTTGTGGCCACGTTA | + |
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Preference number: 2 (lower is better) Translates to: VGLSLEFLYRSQFPELIILYLCA*HLVATL Trigger: TAACGTGGCCACAAGGTGTCAAGCACAGAGATACAA...AATGATGAGCTCTGGGAACTGTGACCTGTATAAAAATTCCAAAGAAAGACCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGGTCTTTCTTTGGAATTTTTATACAGGTCACAGTTCCCAGAGCTCATCATTATCTTTGTATCTCTGTaGTTGACACCTTGTGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: VGLSLEFLYRSQFPELIIIFVSL*LTPCGH Trigger: GTGGCCACAAGGTGTCAAGCACAGAGATACAAAGAT...AATGATGAGCTCTGGGAACTGTGACCTGTATAAAAATTCCAAAGAAAGACCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCATCAAGAAACCAGATGGCCTGTGGGTCTTTCTTTGGAATTTTTATACAGTCACAGCTTTCTTTTaGGTGGGCTTTTGTTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: PSIKKPDGLWVFLWNFYTVTAFF*VGFCCF Trigger: GAAGCAACAAAAGCCCACCCAAAAGAAAGCTGTGAC...TGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCATCAAGAAACCAGATGGCCTGTGGGTCTTTCTTTGGAATTTTTATACATCACTCTATAGTGGTTaGGAGAGGTCACAGCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: PSIKKPDGLWVFLWNFYTSLYSG*ERSQLS Trigger: AGAAAGCTGTGACCTCTCCCAACCACTATAGAGTGA...TGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCATCAAGAAACCAGATGGCCTGTGGGTCTTTCTTTGGAATTTTTATACACCTGCTTATCTTTTCTaGATTTTTACAGCCCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: PSIKKPDGLWVFLWNFYTPAYLF*IFTALA Trigger: GGCAAGGGCTGTAAAAATTCAGAAAAGATAAGCAGG...TGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGGTCTTTCTTTGGAATTTTTATACAGGTCACAGTTCCCAGAGCTCATCATTCTTGTGATGGATGACTaGTTCTTGAGTAGTAAACTG | + |
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Preference number: 2 (lower is better) Translates to: VGLSLEFLYRSQFPELIILVMDD*FLSSKL Trigger: CAGTTTACTACTCAAGAAGCAGTCATCCATCACAAG...AATGATGAGCTCTGGGAACTGTGACCTGTATAAAAATTCCAAAGAAAGACCCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCATCAAGAAACCAGATGGCCTGTGGGTCTTTCTTTGGAATTTTTATACAGAATCGAGCTATATCTaGAGAGACAGCCAAAATCTT | + |
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Preference number: 2 (lower is better) Translates to: PSIKKPDGLWVFLWNFYTESSYI*RDSQNL Trigger: AAGATTTTGGCTGTCTCTCCAGATATAGCTCGATTC...TGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR CAA 90 bp | GCTATGGATAAGGGTAAATCTCCAGAATGCACTGGATTTAGTCTATaGCTTAATCAGTGTTCTTCTACCTCACAACAAGGTAGAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: AMDKGKSPECTGFSL*LNQCSSTSQQGRIP Trigger: TGGAATTCTACCTTGTTGTGAGGTAGAAGAACACTGATTAAGCAATAGACTAAATCCAGTGCATTCTGGAGATTTACCCTTATCCATAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCATCAAGAAACCAGATGGCCTGTGGGTCTTTCTTTGGAATTTTTATACATTCTCAATGGGACAATaGGCAATAACTTTAGCCATT | + |
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Preference number: 2 (lower is better) Translates to: PSIKKPDGLWVFLWNFYTFSMGQ*AITLAI Trigger: AATGGCTAAAGTTATTGCTCATTGTCCCATTGAGAA...TGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCATCAAGAAACCAGATGGCCTGTGGGTCTTTCTTTGGAATTTTTATACATGGAAAGTGATATTTTaGTCACTAGTGGAGGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: PSIKKPDGLWVFLWNFYTWKVIF*SLVEAL Trigger: TAAAGCCTCCACTAGTGACCAAAATATCACTTTCCA...TGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR TCA 90 bp | GATGCAATGCTATGGATAAGGGTAAATCTCCAGAATGCACTGGATTTAGTCTATTTCCCACCTATTGACTaGTTTAACAATCTCAATAGC | + |
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Preference number: 2 (lower is better) Translates to: DAMLWIRVNLQNALDLVYFPPID*FNNLNS Trigger: GCTATTGAGATTGTTAAATCAGTCAATAGGTGGGAA...ATAGACTAAATCCAGTGCATTCTGGAGATTTACCCTTATCCATAGCATTGCATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCATATCACAATCAGTGGACAGAAGTTGACTTACAGAAAACATACCACACATCAGCCCTATAGCAGATaGTGTATTTTAGTCAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: KHITISGQKLTYRKHTTHQPYSR*CILVKS Trigger: ACTCTTGACTAAAATACATCATCTGCTATAGGGCTG...ATGTGTGGTATGTTTTCTGTAAGTCAACTTCTGTCCACTGATTGTGATATGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTCCATCAAGAAACCAGATGGCCTGTGGGTCTTTCTTTGGAATTTTTATACACCTCCTTTAGGAATTTaGATAACAAATGCTCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: PSIKKPDGLWVFLWNFYTPPLGI*ITNAQK Trigger: CTTTTGAGCATTTGTTATGCAAATTCCTAAAGGAGG...TGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGAAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCATCAAGAAACCAGATGGCCTGTGGGTCTTTCTTTGGAATTTTTATACAGTAAAGTCTCATCAGTaGAAAGTGATATTTTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: PSIKKPDGLWVFLWNFYTVKSHQ*KVIFWS Trigger: TGACCAAAATATCACTTTCCACTGATGAGACTTTAC...TGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGAAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCATATCACAATCAGTGGACAGAAGTTGACTTACAGAAAACATACCACACATTTCCCACCTATTGACTaGTTTAACAATCTCAATAGC | + |
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Preference number: 2 (lower is better) Translates to: KHITISGQKLTYRKHTTHFPPID*FNNLNS Trigger: GCTATTGAGATTGTTAAATCAGTCAATAGGTGGGAA...ATGTGTGGTATGTTTTCTGTAAGTCAACTTCTGTCCACTGATTGTGATATGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCATATCACAATCAGTGGACAGAAGTTGACTTACAGAAAACATACCACACATGGTAAATCTCCAGAATaGACTGGATTTAGTCTATTG | + |
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Preference number: 2 (lower is better) Translates to: KHITISGQKLTYRKHTTHGKSPE*TGFSLL Trigger: CAATAGACTAAATCCAGTGCATTCTGGAGATTTACC...ATGTGTGGTATGTTTTCTGTAAGTCAACTTCTGTCCACTGATTGTGATATGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR CAA 90 bp | GACCTCCAAGTACAGTATAGAAAATGTCTTATTCCTAGAAGAAACTaGGACATTTATATAAGTACTAGCCACTGTCACTCTATAGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: DLQVQYRKCLIPRRN*DIYISTSHCHSIVV Trigger: AACCACTATAGAGTGACAGTGGCTAGTACTTATATAAATGTCCAAGTTTCTTCTAGGAATAAGACATTTTCTATACTGTACTTGGAGGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCATATCACAATCAGTGGACAGAAGTTGACTTACAGAAAACATACCACACATGAATTAACTAGTCATTaGAATTATGAGTCAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: KHITISGQKLTYRKHTTHELTSH*NYESGQ Trigger: CTGTCCTGACTCATAATTGCAATGACTAGTTAATTC...ATGTGTGGTATGTTTTCTGTAAGTCAACTTCTGTCCACTGATTGTGATATGCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR GCA 72 bp | AATAGTTACCTTGCAAGGGAGAACCATGCACAGGTATaGTTGTGTGTGGTGTCTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: NSYLARENHAQV*LCVVSVCVCVC Trigger: ACACACACACACACACACAGACACCACACACAAGCATACCTGTGCATGGTTCTCCCTTGCAAGGTAACTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTCCATCAAGAAACCAGATGGCCTGTGGGTCTTTCTTTGGAATTTTTATACACATGCACAGGTATGCTaGTGTGTGGTGTCTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: PSIKKPDGLWVFLWNFYTHAQVC*CVVSVC Trigger: ACACACAGACACCACACACAAGCATACCTGTGCATG...TGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR TCA 72 bp | CCTGTGTTTATCTGGGAATTCTCTGCACCGCTCTTCTaGTGCAATGCTATGGATAAGGGTAAATCTCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: PVFIWEFSAPLF*CNAMDKGKSPE Trigger: TTCTGGAGATTTACCCTTATCCATAGCATTGCATCAGAAGAGCGGTGCAGAGAATTCCCAGATAAACACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR CCA 72 bp | GGGAATTCTCTGCACCGCTCTTCTGATGCAATGCTATaGATAAGGGTAAATCTCCAGAATGCACTGGATTTA | + |
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Preference number: 3 (lower is better) Translates to: GNSLHRSSDAML*IRVNLQNALDL Trigger: TAAATCCAGTGCATTCTGGAGATTTACCCTTATCCATAGCATTGCATCAGAAGAGCGGTGCAGAGAATTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR CCA 72 bp | TCCATCAAGAAACCAGATGGCCTGTGGGTCTTTCTTTaGAATTTTTATACAGGTCACAGTTCCCAGAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: SIKKPDGLWVFL*NFYTGHSSQSS Trigger: TGAGCTCTGGGAACTGTGACCTGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTCCATCAAGAAACCAGATGGCCTGTGGGTCTTTCTTTGGAATTTTTATACATTTGTATCTCTGTGCTaGACACCTTGTGGCCACGTT | + |
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Preference number: 3 (lower is better) Translates to: PSIKKPDGLWVFLWNFYTFVSLC*TPCGHV Trigger: AACGTGGCCACAAGGTGTCAAGCACAGAGATACAAA...TGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGGTCTTTCTTTGGAATTTTTATACAGGTCACAGTTCCCAGAGCTCATCATTTTTGTATCTCTGTGCTaGACACCTTGTGGCCACGTT | + |
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Preference number: 3 (lower is better) Translates to: VGLSLEFLYRSQFPELIIFVSLC*TPCGHV Trigger: AACGTGGCCACAAGGTGTCAAGCACAGAGATACAAA...AATGATGAGCTCTGGGAACTGTGACCTGTATAAAAATTCCAAAGAAAGACCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGGTCTTTCTTTGGAATTTTTATACAGGTCACAGTTCCCAGAGCTCATCATTGGTCACAGCTTTCTTTaGGGTGGGCTTTTGTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: VGLSLEFLYRSQFPELIIGHSFL*GGLLLL Trigger: AAGCAACAAAAGCCCACCCAAAAGAAAGCTGTGACC...AATGATGAGCTCTGGGAACTGTGACCTGTATAAAAATTCCAAAGAAAGACCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR GCA 72 bp | ATATCTGGAGAGACAGCCAAAATCTTTGTATCTCTGTaGTTGACACCTTGTGGCCACGTTATGACTCATTTA | + |
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Preference number: 3 (lower is better) Translates to: ISGETAKIFVSL*LTPCGHVMTHL Trigger: TAAATGAGTCATAACGTGGCCACAAGGTGTCAAGCACAGAGATACAAAGATTTTGGCTGTCTCTCCAGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR CCA 72 bp | GAAGCTCAACTAGCCAGAGAAGCATATCACAATCAGTaGACAGAAGTTGACTTACAGAAAACATACCACACA | + |
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Preference number: 3 (lower is better) Translates to: EAQLAREAYHNQ*TEVDLQKTYHT Trigger: TGTGTGGTATGTTTTCTGTAAGTCAACTTCTGTCCACTGATTGTGATATGCTTCTCTGGCTAGTTGAGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR CCA 72 bp | AGCCAAAATCTTTGTATCTCTGTGCTTGACACCTTGTaGCCACGTTATGACTCATTTACAAGCCACACATTT | + |
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Preference number: 3 (lower is better) Translates to: SQNLCISVLDTL*PRYDSFTSHTF Trigger: AAATGTGTGGCTTGTAAATGAGTCATAACGTGGCCACAAGGTGTCAAGCACAGAGATACAAAGATTTTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGGTCTTTCTTTGGAATTTTTATACAGGTCACAGTTCCCAGAGCTCATCATTATCAGTGGACAGAAGTaGACTTACAGAAAACATACC | + |
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Preference number: 3 (lower is better) Translates to: VGLSLEFLYRSQFPELIIISGQK*TYRKHT Trigger: GGTATGTTTTCTGTAAGTCAACTTCTGTCCACTGAT...AATGATGAGCTCTGGGAACTGTGACCTGTATAAAAATTCCAAAGAAAGACCCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTCCATCAAGAAACCAGATGGCCTGTGGGTCTTTCTTTGGAATTTTTATACAATCAGTGGACAGAAGTaGACTTACAGAAAACATACC | + |
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Preference number: 3 (lower is better) Translates to: PSIKKPDGLWVFLWNFYTISGQK*TYRKHT Trigger: GGTATGTTTTCTGTAAGTCAACTTCTGTCCACTGAT...TGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTCCATCAAGAAACCAGATGGCCTGTGGGTCTTTCTTTGGAATTTTTATACACAGGGAAATTCAAAGTaGGAACACACTTTAAATCCC | + |
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Preference number: 3 (lower is better) Translates to: PSIKKPDGLWVFLWNFYTQGNSK*EHTLNP Trigger: GGGATTTAAAGTGTGTTCCAACTTTGAATTTCCCTG...TGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGGTCTTTCTTTGGAATTTTTATACAGGTCACAGTTCCCAGAGCTCATCATTATGCTTTCCCACCTATaGACTGATTTAACAATCTCA | + |
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Preference number: 3 (lower is better) Translates to: VGLSLEFLYRSQFPELIIMLSHL*TDLTIS Trigger: TGAGATTGTTAAATCAGTCAATAGGTGGGAAAGCAT...AATGATGAGCTCTGGGAACTGTGACCTGTATAAAAATTCCAAAGAAAGACCCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTCCATCAAGAAACCAGATGGCCTGTGGGTCTTTCTTTGGAATTTTTATACAATGCTTTCCCACCTATaGACTGATTTAACAATCTCA | + |
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Preference number: 3 (lower is better) Translates to: PSIKKPDGLWVFLWNFYTMLSHL*TDLTIS Trigger: TGAGATTGTTAAATCAGTCAATAGGTGGGAAAGCAT...TGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGGTCTTTCTTTGGAATTTTTATACAGGTCACAGTTCCCAGAGCTCATCATTAAAGGGAAAGGTCGATaGAATGCATTTATTTTGGTG | + |
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Preference number: 3 (lower is better) Translates to: VGLSLEFLYRSQFPELIIKGKGR*NAFILV Trigger: CACCAAAATAAATGCATTCAATCGACCTTTCCCTTT...AATGATGAGCTCTGGGAACTGTGACCTGTATAAAAATTCCAAAGAAAGACCCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTCCATCAAGAAACCAGATGGCCTGTGGGTCTTTCTTTGGAATTTTTATACAGAATTTTTACAGCCCTaGCCATTTTTCAGGGAAATT | + |
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Preference number: 3 (lower is better) Translates to: PSIKKPDGLWVFLWNFYTEFLQP*PFFREI Trigger: AATTTCCCTGAAAAATGGCAAGGGCTGTAAAAATTC...TGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR GCA 72 bp | AGGGTAAATCTCCAGAATGCACTGGATTTAGTCTATTaGTTAATCAGTGTTCTTCTACCTCACAACAAGGTA | + |
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Preference number: 3 (lower is better) Translates to: RVNLQNALDLVY*LISVLLPHNKV Trigger: TACCTTGTTGTGAGGTAGAAGAACACTGATTAAGCAATAGACTAAATCCAGTGCATTCTGGAGATTTACCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR TCA 72 bp | GAAGCCAATACTGAATATGCTTTCCCACCTATTGACTaGTTTAACAATCTCAATAGCTATGTTTCCTTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: EANTEYAFPPID*FNNLNSYVSFY Trigger: GTAGAAGGAAACATAGCTATTGAGATTGTTAAATCAGTCAATAGGTGGGAAAGCATATTCAGTATTGGCTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR GCA 72 bp | GTAAACTGGTTAGTTTCTAATAGATGTAAGATTCCCTaGTTATCTTTTCTGAATTTTTACAGCCCTTGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: VNWLVSNRCKIP*LSFLNFYSPCH Trigger: ATGGCAAGGGCTGTAAAAATTCAGAAAAGATAAGCAGGGAATCTTACATCTATTAGAAACTAACCAGTTTAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS-3UTR TCA 90 bp | GTGGGTCTTTCTTTGGAATTTTTATACAGGTCACAGTTCCCAGAGCTCATCATTTTTGCTGCAACCTCCTaGGAGCACTTTTCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGLSLEFLYRSQFPELIIFAATS*EHFSHQ Trigger: CTGATGTGAAAAGTGCTCTCAGGAGGTTGCAGCAAA...AATGATGAGCTCTGGGAACTGTGACCTGTATAAAAATTCCAAAGAAAGACCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR CAA 72 bp | TCTGGAGAGACAGCCAAAATCTTTGTATCTCTGTGCTaGACACCTTGTGGCCACGTTATGACTCATTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: SGETAKIFVSLC*TPCGHVMTHLQ Trigger: TTGTAAATGAGTCATAACGTGGCCACAAGGTGTCAAGCACAGAGATACAAAGATTTTGGCTGTCTCTCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS-3UTR TCA 90 bp | GATGCAATGCTATGGATAAGGGTAAATCTCCAGAATGCACTGGATTTAGTCTATTTTGCTGCAACCTCCTaGGAGCACTTTTCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: DAMLWIRVNLQNALDLVYFAATS*EHFSHQ Trigger: CTGATGTGAAAAGTGCTCTCAGGAGGTTGCAGCAAA...ATAGACTAAATCCAGTGCATTCTGGAGATTTACCCTTATCCATAGCATTGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS-3UTR GCA 90 bp | GTGGGTCTTTCTTTGGAATTTTTATACAGGTCACAGTTCCCAGAGCTCATCATTCTCAAGCAAAGATTTTaGTGCAACCTCCTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGLSLEFLYRSQFPELIILKQRF*CNLLRA Trigger: TGCTCTCAGGAGGTTGCAGCAAAATCTTTGCTTGAG...AATGATGAGCTCTGGGAACTGTGACCTGTATAAAAATTCCAAAGAAAGACCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
||
| CDS-3UTR CCA 90 bp | GATGCAATGCTATGGATAAGGGTAAATCTCCAGAATGCACTGGATTTAGTCTATAAGTACATGGGTGTTTaGAGCTGTAGGTCAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DAMLWIRVNLQNALDLVYKYMGV*SCRSRV Trigger: CACCCTTGACCTACAGCTCCAAACACCCATGTACTT...ATAGACTAAATCCAGTGCATTCTGGAGATTTACCCTTATCCATAGCATTGCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCATCAAGAAACCAGATGGCCTGTGGGTCTTTCTTTGGAATTTTTATACAGTGAAAACAGTTAGGTaGGGAATACAGGTGGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PSIKKPDGLWVFLWNFYTVKTVR*GIQVAN Trigger: GTTTGCCACCTGTATTCCCCACCTAACTGTTTTCAC...TGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCCATCAAGAAACCAGATGGCCTGTGGGTCTTTCTTTGGAATTTTTATACAACCAATTCCAAGACATaGGTAAATGGCCACAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSIKKPDGLWVFLWNFYTTNSKT*VNGHKC Trigger: ACACTTGTGGCCATTTACTCATGTCTTGGAATTGGT...TGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS-3UTR GCA 90 bp | GATGCAATGCTATGGATAAGGGTAAATCTCCAGAATGCACTGGATTTAGTCTATAAGGCATGGAAAATGTaGCAGCTGTGTATATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DAMLWIRVNLQNALDLVYKAWKM*QLCIWL Trigger: GAGCCATATACACAGCTGGCACATTTTCCATGCCTT...ATAGACTAAATCCAGTGCATTCTGGAGATTTACCCTTATCCATAGCATTGCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGTCTTTCTTTGGAATTTTTATACAGGTCACAGTTCCCAGAGCTCATCATTAAGCAAAGATTTTGCTaGAACCTCCTGAGAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: VGLSLEFLYRSQFPELIIKQRFC*NLLRAL Trigger: AAGTGCTCTCAGGAGGTTGCAGCAAAATCTTTGCTT...AATGATGAGCTCTGGGAACTGTGACCTGTATAAAAATTCCAAAGAAAGACCCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS-3UTR CCA 90 bp | AAGCATATCACAATCAGTGGACAGAAGTTGACTTACAGAAAACATACCACACATAAGTACATGGGTGTTTaGAGCTGTAGGTCAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KHITISGQKLTYRKHTTHKYMGV*SCRSRV Trigger: CACCCTTGACCTACAGCTCCAAACACCCATGTACTT...ATGTGTGGTATGTTTTCTGTAAGTCAACTTCTGTCCACTGATTGTGATATGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS-3UTR CCA 90 bp | GTGGGTCTTTCTTTGGAATTTTTATACAGGTCACAGTTCCCAGAGCTCATCATTGTCATTAAAAATACCTaGAAGGCACAAGCCAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: VGLSLEFLYRSQFPELIIVIKNT*KAQART Trigger: CGTTCTGGCTTGTGCCTTCCAGGTATTTTTAATGAC...AATGATGAGCTCTGGGAACTGTGACCTGTATAAAAATTCCAAAGAAAGACCCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCATCAAGAAACCAGATGGCCTGTGGGTCTTTCTTTGGAATTTTTATACACAAGACATGAGTAAATaGCCACAAGTGTTTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSIKKPDGLWVFLWNFYTQDMSK*PQVFQS Trigger: GCTCTGAAACACTTGTGGCCATTTACTCATGTCTTG...TGTATAAAAATTCCAAAGAAAGACCCACAGGCCATCTGGTTTCTTGATGGAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS-3UTR CCA 90 bp | GATGCAATGCTATGGATAAGGGTAAATCTCCAGAATGCACTGGATTTAGTCTATGTCATTAAAAATACCTaGAAGGCACAAGCCAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: DAMLWIRVNLQNALDLVYVIKNT*KAQART Trigger: CGTTCTGGCTTGTGCCTTCCAGGTATTTTTAATGAC...ATAGACTAAATCCAGTGCATTCTGGAGATTTACCCTTATCCATAGCATTGCATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS-3UTR CCA 90 bp | AAGCATATCACAATCAGTGGACAGAAGTTGACTTACAGAAAACATACCACACATTGCCAGCTGTGTATATaGCTCCAAAAAGCATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KHITISGQKLTYRKHTTHCQLCI*LQKAFQ Trigger: CTGGAATGCTTTTTGGAGCCATATACACAGCTGGCA...ATGTGTGGTATGTTTTCTGTAAGTCAACTTCTGTCCACTGATTGTGATATGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS-3UTR CCA 90 bp | AAGCATATCACAATCAGTGGACAGAAGTTGACTTACAGAAAACATACCACACATGTGAAAACAGTTAGGTaGGGAATACAGGTGGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KHITISGQKLTYRKHTTHVKTVR*GIQVAN Trigger: GTTTGCCACCTGTATTCCCCACCTAACTGTTTTCAC...ATGTGTGGTATGTTTTCTGTAAGTCAACTTCTGTCCACTGATTGTGATATGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS-3UTR TCA 90 bp | AAGCATATCACAATCAGTGGACAGAAGTTGACTTACAGAAAACATACCACACATACCAATTCCAAGACATaGGTAAATGGCCACAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KHITISGQKLTYRKHTTHTNSKT*VNGHKC Trigger: ACACTTGTGGCCATTTACTCATGTCTTGGAATTGGT...ATGTGTGGTATGTTTTCTGTAAGTCAACTTCTGTCCACTGATTGTGATATGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS-3UTR TCA 90 bp | AAGCATATCACAATCAGTGGACAGAAGTTGACTTACAGAAAACATACCACACATAAATCACAACACAGATaGAGCAAGACATACCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KHITISGQKLTYRKHTTHKSQHR*SKTYPD Trigger: GTCTGGGTATGTCTTGCTTCATCTGTGTTGTGATTT...ATGTGTGGTATGTTTTCTGTAAGTCAACTTCTGTCCACTGATTGTGATATGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS-3UTR GCA 90 bp | AAGCATATCACAATCAGTGGACAGAAGTTGACTTACAGAAAACATACCACACATAAGCAAAGATTTTGCTaGAACCTCCTGAGAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: KHITISGQKLTYRKHTTHKQRFC*NLLRAL Trigger: AAGTGCTCTCAGGAGGTTGCAGCAAAATCTTTGCTT...ATGTGTGGTATGTTTTCTGTAAGTCAACTTCTGTCCACTGATTGTGATATGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR CAA 72 bp | AAGGGTAAATCTCCAGAATGCACTGGATTTAGTCTATaGCTTAATCAGTGTTCTTCTACCTCACAACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KGKSPECTGFSL*LNQCSSTSQQG Trigger: ACCTTGTTGTGAGGTAGAAGAACACTGATTAAGCAATAGACTAAATCCAGTGCATTCTGGAGATTTACCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| 3UTR CAA 72 bp | ACAGAGTCTATGGTCAAGAGGATTTGTATTCACTCCTaGTTACCTAATACTATCATATTTTGTTCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: TESMVKRICIHS*LPNTIIFCSTF Trigger: GAATGTGGAACAAAATATGATAGTATTAGGTAACAAGGAGTGAATACAAATCCTCTTGACCATAGACTCTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS CCA 90 bp | AGCAAGACATACCCAGACAAACACCAATTCCAAGACATGAGTAAATaGCCACAAGTGTTTCAGAGCAGGAGATCCTTAGCAATGAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SKTYPDKHQFQDMSK*PQVFQSRRSLAMRE Trigger: TTCCCTCATTGCTAAGGATCTCCTGCTCTGAAACACTTGTGGCCATTTACTCATGTCTTGGAATTGGTGTTTGTCTGGGTATGTCTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069279.5 ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS-3UTR CAA 90 bp | GTGGGTCTTTCTTTGGAATTTTTATACAGGTCACAGTTCCCAGAGCTCATCATTTCTCAAGCAAAGATTTaGCTGCAACCTCCTGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VGLSLEFLYRSQFPELIISQAKI*LQPPES Trigger: GCTCTCAGGAGGTTGCAGCAAAATCTTTGCTTGAGA...AATGATGAGCTCTGGGAACTGTGACCTGTATAAAAATTCCAAAGAAAGACCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS-3UTR CAA 90 bp | AAGCATATCACAATCAGTGGACAGAAGTTGACTTACAGAAAACATACCACACATTCTCAAGCAAAGATTTaGCTGCAACCTCCTGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KHITISGQKLTYRKHTTHSQAKI*LQPPES Trigger: GCTCTCAGGAGGTTGCAGCAAAATCTTTGCTTGAGA...ATGTGTGGTATGTTTTCTGTAAGTCAACTTCTGTCCACTGATTGTGATATGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS TCA 90 bp | AAAAATACCTGGAAGGCACAAGCCAGAACGGAAATAGAATTATTATaGATTAGGCTATTAACAACGAACTTTGGGATTGGAACAGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: KNTWKAQARTEIELL*IRLLTTNFGIGTET Trigger: TGTTTCTGTTCCAATCCCAAAGTTCGTTGTTAATAGCCTAATTCATAATAATTCTATTTCCGTTCTGGCTTGTGCCTTCCAGGTATTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069279.5 ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS CCA 72 bp | GTTAGGTGGGGAATACAGGTGGCAAACGCTTTAGACTaGCCTTTGGTGGTAGGAATCTTCAGCACAGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VRWGIQVANALD*PLVVGIFSTVE Trigger: CTCCACTGTGCTGAAGATTCCTACCACCAAAGGCCAGTCTAAAGCGTTTGCCACCTGTATTCCCCACCTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069279.5 ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS CAA 72 bp | TGGGGAATACAGGTGGCAAACGCTTTAGACTGGCCTTaGGTGGTAGGAATCTTCAGCACAGTGGAGAAAATG | + |
|
Preference number: 6 (lower is better) Translates to: WGIQVANALDWP*VVGIFSTVEKM Trigger: CATTTTCTCCACTGTGCTGAAGATTCCTACCACCAAAGGCCAGTCTAAAGCGTTTGCCACCTGTATTCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069279.5 ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS GCA 72 bp | GTATCACATTGGAGCCACAGAAAGGCATGGAAAATGTaGCAGCTGTGTATATGGCTCCAAAAAGCATTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VSHWSHRKAWKM*QLCIWLQKAFQ Trigger: CTGGAATGCTTTTTGGAGCCATATACACAGCTGGCACATTTTCCATGCCTTTCTGTGGCTCCAATGTGATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069279.5 ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS CCA 72 bp | CAAGCAGTAACAAGGAAAACAGTGAAAACAGTTAGGTaGGGAATACAGGTGGCAAACGCTTTAGACTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: QAVTRKTVKTVR*GIQVANALDWP Trigger: AGGCCAGTCTAAAGCGTTTGCCACCTGTATTCCCCACCTAACTGTTTTCACTGTTTTCCTTGTTACTGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069279.5 ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS TCA 72 bp | GCAAGACATACCCAGACAAACACCAATTCCAAGACATaGGTAAATGGCCACAAGTGTTTCAGAGCAGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: ARHTQTNTNSKT*VNGHKCFRAGD Trigger: ATCTCCTGCTCTGAAACACTTGTGGCCATTTACTCATGTCTTGGAATTGGTGTTTGTCTGGGTATGTCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069279.5 ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS CCA 72 bp | TACCCAGACAAACACCAATTCCAAGACATGAGTAAATaGCCACAAGTGTTTCAGAGCAGGAGATCCTTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: YPDKHQFQDMSK*PQVFQSRRSLA Trigger: TGCTAAGGATCTCCTGCTCTGAAACACTTGTGGCCATTTACTCATGTCTTGGAATTGGTGTTTGTCTGGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069279.5 ENSMUST00000213705.2 ENSMUST00000217494.2 |
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| CDS TCA 72 bp | TGGAAGGCACAAGCCAGAACGGAAATAGAATTATTATaGATTAGGCTATTAACAACGAACTTTGGGATTGGA | + |
|
Preference number: 6 (lower is better) Translates to: WKAQARTEIELL*IRLLTTNFGIG Trigger: TCCAATCCCAAAGTTCGTTGTTAATAGCCTAATTCATAATAATTCTATTTCCGTTCTGGCTTGTGCCTTCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069279.5 ENSMUST00000213705.2 ENSMUST00000217494.2 |
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