Pregenerated sensors for OLFR305 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055571Ensembl transcript IDs: ENSMUST00000069236.4, ENSMUST00000213255.2, ENSMUST00000213869.2, ENSMUST00000216700.2
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGAGGCATATAAAGTTTGCAAGACCAATGGGCCTCTCTTTGAAATaGTGGATGACTAGGCCATCTTCTGATACATATGCAGCTAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: LRHIKFARPMGLSLK*WMTRPSSDTYAARD Trigger: GTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTCATCCATCATTTCAAAGAGAGGCCCATTGGTCTTGCAAACTTTATATGCCTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR TCA 90 bp | CAGATCTTAGACAATGAGATACACTATGATCATGCTAGCACAGAATaGAAACACACCTTTCTTCAAATACACTGTATACCTCTATCACTT | + |
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Preference number: 1 (lower is better) Translates to: QILDNEIHYDHASTE*KHTFLQIHCIPLSL Trigger: AAGTGATAGAGGTATACAGTGTATTTGAAGAAAGGTGTGTTTTCATTCTGTGCTAGCATGATCATAGTGTATCTCATTGTCTAAGATCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR CCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTCCTACTCCCACTTCTTaGCCCTTGCGTTCCCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPPTPTS*PLRSPV Trigger: TACAGGGGAACGCAAGGGCCAAGAAGTGGGAGTAGG...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATCCTACTCCCACTTCTTaGCCCTTGCGTTCCCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYPTPTS*PLRSPV Trigger: TACAGGGGAACGCAAGGGCCAAGAAGTGGGAGTAGG...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTCAGATTCCACCAGTAGAATGTGTTGTACTTGTGGTTTAAGGAGGCTTCAGAATCACAGACAGACCTaGTCCATGCATCATTTACCA | + |
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Preference number: 2 (lower is better) Translates to: LSDSTSRMCCTCGLRRLQNHRQT*SMHHLP Trigger: TGGTAAATGATGCATGGATCAGGTCTGTCTGTGATT...CTGAAGCCTCCTTAAACCACAAGTACAACACATTCTACTGGTGGAATCTGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTCAGATTCCACCAGTAGAATGTGTTGTACTTGTGGTTTAAGGAGGCTTCAGCAGATAAAAAGCATTTaGCTTCACAGAGTCAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: LSDSTSRMCCTCGLRRLQQIKSI*LHRVRS Trigger: ACTTCTGACTCTGTGAAGGCAAATGCTTTTTATCTG...CTGAAGCCTCCTTAAACCACAAGTACAACACATTCTACTGGTGGAATCTGAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR TCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTGTTTCCTTTTCTCCGTaGTGTGGTTATGGGTTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPVSFSP*CGYGFH Trigger: ATGAAACCCATAACCACATCACGGAGAAAAGGAAAC...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR TCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTCATGCTAGCACAGAATaGAAACACACCTTTCTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPHASTE*KHTFLQ Trigger: TTGAAGAAAGGTGTGTTTTCATTCTGTGCTAGCATG...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR CCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTTCCGTGATGTGGTTATaGGTTTCATTTGAAGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPSVMWL*VSFEAD Trigger: ATCTGCTTCAAATGAAACCCATAACCACATCACGGA...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATCATGCTAGCACAGAATaGAAACACACCTTTCTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYHASTE*KHTFLQ Trigger: TTGAAGAAAGGTGTGTTTTCATTCTGTGCTAGCATG...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR TCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTTCACAGAGTCAGAAGTaGATATTTCTGAATTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPSQSQK*IFLNCR Trigger: TCTGCAATTCAGAAATATTCACTTCTGACTCTGTGA...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATTGCGTTGGAAGAAGATaGGTGTCTAATGGGAATAAA | + |
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Preference number: 2 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYCVGRR*VSNGNK Trigger: TTTATTCCCATTAGACACTCATCTTCTTCCAACGCA...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR TCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTTGTGGTTTCTTCTTCTaGAACTTGCTACTAACTCAT | + |
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Preference number: 2 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPCGFFF*NLLLTH Trigger: ATGAGTTAGTAGCAAGTTTCAGAAGAAGAAACCACA...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR GCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTCAGATAAAAAGCATTTaGCTTCACAGAGTCAGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPQIKSI*LHRVRS Trigger: ACTTCTGACTCTGTGAAGGCAAATGCTTTTTATCTG...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR GCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTTTTTTCCACAATGTGTaGTTACCTTTCAGATTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPFFHNV*LPFRFH Trigger: GTGGAATCTGAAAGGTAAGCACACATTGTGGAAAAA...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATTCCGTGATGTGGTTATaGGTTTCATTTGAAGCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYSVMWL*VSFEAD Trigger: ATCTGCTTCAAATGAAACCCATAACCACATCACGGA...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR CCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTCTTTTCTCCGTGATGTaGTTATGGGTTTCATTTGAA | + |
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Preference number: 2 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPLFSVM*LWVSFE Trigger: TTCAAATGAAACCCATAACCACATCACGGAGAAAAG...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATTCACAGAGTCAGAAGTaGATATTTCTGAATTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYSQSQK*IFLNCR Trigger: TCTGCAATTCAGAAATATTCACTTCTGACTCTGTGA...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATTGTGGTTTCTTCTTCTaGAACTTGCTACTAACTCAT | + |
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Preference number: 2 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYCGFFF*NLLLTH Trigger: ATGAGTTAGTAGCAAGTTTCAGAAGAAGAAACCACA...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR CCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTACCCCTTTAGCTCCTTaGTTAATCAACTTTTTATTC | + |
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Preference number: 2 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPTPLAP*LINFLF Trigger: GAATAAAAAGTTGATTAACCAAGGAGCTAAAGGGGT...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATCTTTTCTCCGTGATGTaGTTATGGGTTTCATTTGAA | + |
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Preference number: 2 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYLFSVM*LWVSFE Trigger: TTCAAATGAAACCCATAACCACATCACGGAGAAAAG...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATGAGAAAATTCACGTGTaGTTTCTTCTTCTGAAACTT | + |
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Preference number: 2 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYEKIHV*FLLLKL Trigger: AAGTTTCAGAAGAAGAAACCACACGTGAATTTTCTC...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATACCCCTTTAGCTCCTTaGTTAATCAACTTTTTATTC | + |
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Preference number: 2 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYTPLAP*LINFLF Trigger: GAATAAAAAGTTGATTAACCAAGGAGCTAAAGGGGT...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR CAA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTACCTACTCCCACTTCTaGGCCCTTGCGTTCCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPTYSHF*ALAFPC Trigger: ACAGGGGAACGCAAGGGCCAAGAAGTGGGAGTAGGT...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR TCA 72 bp | CTAGGCCATCTTCTGATACATATGCAGCTAGAGACATaGGTTCCGGGGGAGTACAGGTTAGCTCATATTGTT | + |
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Preference number: 3 (lower is better) Translates to: LGHLLIHMQLET*VPGEYRLAHIV Trigger: AACAATATGAGCTAACCTGTACTCCCCCGGAACTCATGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATACCTACTCCCACTTCTaGGCCCTTGCGTTCCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYTYSHF*ALAFPC Trigger: ACAGGGGAACGCAAGGGCCAAGAAGTGGGAGTAGGT...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR CAA 90 bp | CTTTCAGATTCCACCAGTAGAATGTGTTGTACTTGTGGTTTAAGGAGGCTTCAGTCAGATAAAAAGCATTaGCCTTCACAGAGTCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: LSDSTSRMCCTCGLRRLQSDKKH*PSQSQK Trigger: CTTCTGACTCTGTGAAGGCAAATGCTTTTTATCTGA...CTGAAGCCTCCTTAAACCACAAGTACAACACATTCTACTGGTGGAATCTGAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR CAA 90 bp | CTTTCAGATTCCACCAGTAGAATGTGTTGTACTTGTGGTTTAAGGAGGCTTCAGCATAAAATGTCCCTATaGCCTCAGATATACTATGTC | + |
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Preference number: 3 (lower is better) Translates to: LSDSTSRMCCTCGLRRLQHKMSL*PQIYYV Trigger: GACATAGTATATCTGAGGCAATAGGGACATTTTATG...CTGAAGCCTCCTTAAACCACAAGTACAACACATTCTACTGGTGGAATCTGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR TCA 72 bp | ATAAAGTTTGCAAGACCAATGGGCCTCTCTTTGAAATaGTGGATGACTAGGCCATCTTCTGATACATATGCA | + |
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Preference number: 3 (lower is better) Translates to: IKFARPMGLSLK*WMTRPSSDTYA Trigger: TGCATATGTATCAGAAGATGGCCTAGTCATCCATCATTTCAAAGAGAGGCCCATTGGTCTTGCAAACTTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR CAA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATTCCCTCTCACCACTaGGCAGAATCTCATAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPIPSHH*AESHRN Trigger: ATTTCTATGAGATTCTGCCAAGTGGTGAGAGGGAAT...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATATTCCCTCTCACCACTaGGCAGAATCTCATAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYIPSHH*AESHRN Trigger: ATTTCTATGAGATTCTGCCAAGTGGTGAGAGGGAAT...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATCATAAAATGTCCCTATaGCCTCAGATATACTATGTC | + |
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Preference number: 3 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYHKMSL*PQIYYV Trigger: GACATAGTATATCTGAGGCAATAGGGACATTTTATG...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR CCA 72 bp | TTTTTATATTCTCTGAGATTATTCCCTCTCACCACTTaGCAGAATCTCATAGAAATCAGGGTGAATCTTAAC | + |
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Preference number: 3 (lower is better) Translates to: FLYSLRLFPLTT*QNLIEIRVNLN Trigger: GTTAAGATTCACCCTGATTTCTATGAGATTCTGCCAAGTGGTGAGAGGGAATAATCTCAGAGAATATAAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR CCA 72 bp | AAAAGTAATATACATATAATGGTTGAAATCATGAGATaGCACAGCGGGTCCAATTTTTCCACAATGTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: KSNIHIMVEIMR*HSGSNFSTMCA Trigger: AGCACACATTGTGGAAAAATTGGACCCGCTGTGCCATCTCATGATTTCAACCATTATATGTATATTACTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR GCA 90 bp | CTTTCAGATTCCACCAGTAGAATGTGTTGTACTTGTGGTTTAAGGAGGCTTCAGGATGGGGGATACAGGTaGCAAATGCTTTGGACTGAC | + |
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Preference number: 4 (lower is better) Translates to: LSDSTSRMCCTCGLRRLQDGGYR*QMLWTD Trigger: GTCAGTCCAAAGCATTTGGCACCTGTATCCCCCATC...CTGAAGCCTCCTTAAACCACAAGTACAACACATTCTACTGGTGGAATCTGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR TCA 90 bp | CTTTCAGATTCCACCAGTAGAATGTGTTGTACTTGTGGTTTAAGGAGGCTTCAGTGCCAGCTGTGTACATaGCTCCAAAGAATAATCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSDSTSRMCCTCGLRRLQCQLCT*LQRIIQ Trigger: CTGGATTATTCTTTGGAGTCATGTACACAGCTGGCA...CTGAAGCCTCCTTAAACCACAAGTACAACACATTCTACTGGTGGAATCTGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR TCA 90 bp | CTTTCAGATTCCACCAGTAGAATGTGTTGTACTTGTGGTTTAAGGAGGCTTCAGCCAAATGCTTTGGACTaGCCTTTAGTGGTAGGAATC | + |
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Preference number: 4 (lower is better) Translates to: LSDSTSRMCCTCGLRRLQPNALD*PLVVGI Trigger: GATTCCTACCACTAAAGGTCAGTCCAAAGCATTTGG...CTGAAGCCTCCTTAAACCACAAGTACAACACATTCTACTGGTGGAATCTGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR TCA 90 bp | CTTTCAGATTCCACCAGTAGAATGTGTTGTACTTGTGGTTTAAGGAGGCTTCAGATCCAAGGAGAGCCATaGAAAATACCTGAAATGCAC | + |
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Preference number: 4 (lower is better) Translates to: LSDSTSRMCCTCGLRRLQIQGEP*KIPEMH Trigger: GTGCATTTCAGGTATTTTTCATGGCTCTCCTTGGAT...CTGAAGCCTCCTTAAACCACAAGTACAACACATTCTACTGGTGGAATCTGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR GCA 90 bp | CTTTCAGATTCCACCAGTAGAATGTGTTGTACTTGTGGTTTAAGGAGGCTTCAGCATAATGTAGGGGACTaGAAATGGCAACATAGCGAT | + |
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Preference number: 4 (lower is better) Translates to: LSDSTSRMCCTCGLRRLQHNVGD*KWQHSD Trigger: ATCGCTATGTTGCCATTTGCAGTCCCCTACATTATG...CTGAAGCCTCCTTAAACCACAAGTACAACACATTCTACTGGTGGAATCTGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR GCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTGATGGGGGATACAGGTaGCAAATGCTTTGGACTGAC | + |
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Preference number: 4 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPDGGYR*QMLWTD Trigger: GTCAGTCCAAAGCATTTGGCACCTGTATCCCCCATC...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR TCA 90 bp | CTTTCAGATTCCACCAGTAGAATGTGTTGTACTTGTGGTTTAAGGAGGCTTCAGGCCATGAAAAATACCTaGAATGCACATCCAAGTATG | + |
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Preference number: 4 (lower is better) Translates to: LSDSTSRMCCTCGLRRLQAMKNT*NAHPSM Trigger: CATACTTGGATGTGCATTTCAGGTATTTTTCATGGC...CTGAAGCCTCCTTAAACCACAAGTACAACACATTCTACTGGTGGAATCTGAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR TCA 90 bp | CTTTCAGATTCCACCAGTAGAATGTGTTGTACTTGTGGTTTAAGGAGGCTTCAGATAAATGATCATGAGTaGTCCAGAGCAGGAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: LSDSTSRMCCTCGLRRLQINDHE*SRAGNP Trigger: AGGATTTCCTGCTCTGGATCACTCATGATCATTTAT...CTGAAGCCTCCTTAAACCACAAGTACAACACATTCTACTGGTGGAATCTGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR TCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTTGCCAGCTGTGTACATaGCTCCAAAGAATAATCCAG | + |
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Preference number: 4 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPCQLCT*LQRIIQ Trigger: CTGGATTATTCTTTGGAGTCATGTACACAGCTGGCA...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR TCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTCCAAATGCTTTGGACTaGCCTTTAGTGGTAGGAATC | + |
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Preference number: 4 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPPNALD*PLVVGI Trigger: GATTCCTACCACTAAAGGTCAGTCCAAAGCATTTGG...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR CCA 90 bp | CTTTCAGATTCCACCAGTAGAATGTGTTGTACTTGTGGTTTAAGGAGGCTTCAGAGAATCTGTAGCTCATaGATATCAGAGAAACCCATA | + |
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Preference number: 4 (lower is better) Translates to: LSDSTSRMCCTCGLRRLQRICSS*ISEKPI Trigger: TATGGGTTTCTCTGATATCCATGAGCTACAGATTCT...CTGAAGCCTCCTTAAACCACAAGTACAACACATTCTACTGGTGGAATCTGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR TCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATCCAAGGAGAGCCATaGAAAATACCTGAAATGCAC | + |
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Preference number: 4 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPIQGEP*KIPEMH Trigger: GTGCATTTCAGGTATTTTTCATGGCTCTCCTTGGAT...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR TCA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATTGCCAGCTGTGTACATaGCTCCAAAGAATAATCCAG | + |
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Preference number: 4 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYCQLCT*LQRIIQ Trigger: CTGGATTATTCTTTGGAGTCATGTACACAGCTGGCA...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR TCA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATCCAAATGCTTTGGACTaGCCTTTAGTGGTAGGAATC | + |
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Preference number: 4 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYPNALD*PLVVGI Trigger: GATTCCTACCACTAAAGGTCAGTCCAAAGCATTTGG...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR GCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTCATAATGTAGGGGACTaGAAATGGCAACATAGCGAT | + |
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Preference number: 4 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPHNVGD*KWQHSD Trigger: ATCGCTATGTTGCCATTTGCAGTCCCCTACATTATG...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR CAA 72 bp | CTCTATATTGCTCAGGGGTGCATGAATAATGATATTTaGCTAGCATCAGAGCTTATAGTAGATATGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: LYIAQGCMNNDI*LASELIVDMWS Trigger: GGACCACATATCTACTATAAGCTCTGATGCTAGCAAAATATCATTATTCATGCACCCCTGAGCAATATAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR TCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTGCCATGAAAAATACCTaGAATGCACATCCAAGTATG | + |
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Preference number: 4 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPAMKNT*NAHPSM Trigger: CATACTTGGATGTGCATTTCAGGTATTTTTCATGGC...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR TCA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATATCCAAGGAGAGCCATaGAAAATACCTGAAATGCAC | + |
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Preference number: 4 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYIQGEP*KIPEMH Trigger: GTGCATTTCAGGTATTTTTCATGGCTCTCCTTGGAT...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR TCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAATGATCATGAGTaGTCCAGAGCAGGAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPINDHE*SRAGNP Trigger: AGGATTTCCTGCTCTGGATCACTCATGATCATTTAT...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR TCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATGAAGGAAGTCTCTTaGGTAGAGATTTTGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPMKEVS*VEILKQ Trigger: CTGCTTCAAAATCTCTACTCAAGAGACTTCCTTCAT...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR GCA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATCATAATGTAGGGGACTaGAAATGGCAACATAGCGAT | + |
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Preference number: 4 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYHNVGD*KWQHSD Trigger: ATCGCTATGTTGCCATTTGCAGTCCCCTACATTATG...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR TCA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATATAAATGATCATGAGTaGTCCAGAGCAGGAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYINDHE*SRAGNP Trigger: AGGATTTCCTGCTCTGGATCACTCATGATCATTTAT...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR TCA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATATGAAGGAAGTCTCTTaGGTAGAGATTTTGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYMKEVS*VEILKQ Trigger: CTGCTTCAAAATCTCTACTCAAGAGACTTCCTTCAT...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR CCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTAGAATCTGTAGCTCATaGATATCAGAGAAACCCATA | + |
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Preference number: 4 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPRICSS*ISEKPI Trigger: TATGGGTTTCTCTGATATCCATGAGCTACAGATTCT...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR CCA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATAGAATCTGTAGCTCATaGATATCAGAGAAACCCATA | + |
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Preference number: 4 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYRICSS*ISEKPI Trigger: TATGGGTTTCTCTGATATCCATGAGCTACAGATTCT...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR CCA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATGCACATCCAAGTATaGAAATGGAATTTTTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPMHIQV*KWNFCA Trigger: TGCACAAAAATTCCATTTCCATACTTGGATGTGCAT...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| 3UTR CAA 72 bp | GAATTCGAAATAAATTCAGGGAGATCATCGATTGCGTaGGAAGAAGATGAGTGTCTAATGGGAATAAAATAC | + |
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Preference number: 4 (lower is better) Translates to: EFEINSGRSSIA*EEDECLMGIKY Trigger: GTATTTTATTCCCATTAGACACTCATCTTCTTCCAACGCAATCGATGATCTCCCTGAATTTATTTCGAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR CCA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATATGCACATCCAAGTATaGAAATGGAATTTTTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYMHIQV*KWNFCA Trigger: TGCACAAAAATTCCATTTCCATACTTGGATGTGCAT...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS TCA 90 bp | AGAACAAATACTTCTCCTGATCCAAGGAGAGCCATGAAAAATACCTaGAATGCACATCCAAGTATGGAAATGGAATTTTTGTGCATAAGG | + |
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Preference number: 5 (lower is better) Translates to: RTNTSPDPRRAMKNT*NAHPSMEMEFLCIR Trigger: CCTTATGCACAAAAATTCCATTTCCATACTTGGATGTGCATTTCAGGTATTTTTCATGGCTCTCCTTGGATCAGGAGAAGTATTTGTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000069236.4 ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR CAA 90 bp | AACCATAAAGTATACATAGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTCATGAAGGAAGTCTCTaGAGTAGAGATTTTGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: NHKVYIAKLPNFCGHMTPHEGSL*SRDFEA Trigger: TGCTTCAAAATCTCTACTCAAGAGACTTCCTTCATG...AGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCTATGTATACTTTATGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS CCA 90 bp | AGGTATAGTACTAAAAATAACACTCCACATAGAATCTGTAGCTCATaGATATCAGAGAAACCCATAAGTATGAATCCAGTTACTGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: RYSTKNNTPHRICSS*ISEKPISMNPVTAV Trigger: CACTGCAGTAACTGGATTCATACTTATGGGTTTCTCTGATATCCATGAGCTACAGATTCTATGTGGAGTGTTATTTTTAGTACTATACCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069236.4 ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS-3UTR CAA 90 bp | AGCAAAACTTCCAAATTTCTGTGGTCACATGACCCCTATAAGAATCATACATATCATGAAGGAAGTCTCTaGAGTAGAGATTTTGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: SKTSKFLWSHDPYKNHTYHEGSL*SRDFEA Trigger: TGCTTCAAAATCTCTACTCAAGAGACTTCCTTCATG...ATATGTATGATTCTTATAGGGGTCATGTGACCACAGAAATTTGGAAGTTTTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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| CDS TCA 72 bp | CACAGAAAGTCATGGAAAATGTGCCAGCTGTGTACATaGCTCCAAAGAATAATCCAGTGCCCCAGGAAACGC | + |
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Preference number: 6 (lower is better) Translates to: HRKSWKMCQLCT*LQRIIQCPRKR Trigger: GCGTTTCCTGGGGCACTGGATTATTCTTTGGAGTCATGTACACAGCTGGCACATTTTCCATGACTTTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069236.4 ENSMUST00000213255.2 ENSMUST00000213869.2 ENSMUST00000216700.2 |
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