Pregenerated sensors for OLFR30 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043314Ensembl transcript IDs: ENSMUST00000055204.6, ENSMUST00000215691.2
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGATACAGAGGGGATCGGTTACTTTCTTGGTCCACAAGGAAGGCTaGGGTGTTCTGAGGTGGAGGGGAGCCAGTGTAGATAAAGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: VIQRGSVTFLVHKEG*GVLRWRGASVDKAL Trigger: CAGAGCTTTATCTACACTGGCTCCCCTCCACCTCAGAACACCCCAGCCTTCCTTGTGGACCAAGAAAGTAACCGATCCCCTCTGTATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR TCA 90 bp | CCAGTATTTGTTACTGATCACGTGTTCCAGTTCCCTCCTAGAAGCTaGCCCCGTGGCATTAAAGGAGCAAATCCTCTGGGTCTGTATACT | + |
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Preference number: 1 (lower is better) Translates to: PVFVTDHVFQFPPRS*PRGIKGANPLGLYT Trigger: AGTATACAGACCCAGAGGATTTGCTCCTTTAATGCCACGGGGTCAGCTTCTAGGAGGGAACTGGAACACGTGATCAGTAACAAATACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR TCA 90 bp | AGGCAGGAACAAATTCTAAGAAGCTGGCATCAGAACCGGCAGTACTaGGATCAGGTAAGGAAATGTTCTTTGCAGTGTTTATTTATCCAG | + |
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Preference number: 1 (lower is better) Translates to: RQEQILRSWHQNRQY*DQVRKCSLQCLFIQ Trigger: CTGGATAAATAAACACTGCAAAGAACATTTCCTTACCTGATCTCAGTACTGCCGGTTCTGATGCCAGCTTCTTAGAATTTGTTCCTGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR CAA 90 bp | AAGAGAAGAGGGAGCTGTCGGAAGATGTCAGGTGCAGTTCCTGCCTaGGAGGACTCTGCTGAGGGCCTACCTGTGCTGAGGATGTTCATG | + |
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Preference number: 2 (lower is better) Translates to: KRRGSCRKMSGAVPA*EDSAEGLPVLRMFM Trigger: CATGAACATCCTCAGCACAGGTAGGCCCTCAGCAGAGTCCTCCAAGGCAGGAACTGCACCTGACATCTTCCGACAGCTCCCTCTTCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAGCAAGAGAAGAGGGAGCTGTCGGAAGATGTCAGGTGCAGTTCCTGCCTTGAGGGCCTACCTGTGCTaGGGATGTTCATGCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: LSKRRGSCRKMSGAVPALRAYLC*GCSCRT Trigger: TGTCCTGCATGAACATCCTCAGCACAGGTAGGCCCT...CAAGGCAGGAACTGCACCTGACATCTTCCGACAGCTCCCTCTTCTCTTGCTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAAGAGGGAGCTGTCGGAAGATGTCAGGTGCAGTTCCTGCCTTGGAGGACTCGATCGGTTACTTTCTTaGTCCACAAGGAAGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: EKRELSEDVRCSSCLGGLDRLLS*STRKAG Trigger: CCCAGCCTTCCTTGTGGACCAAGAAAGTAACCGATC...GAGTCCTCCAAGGCAGGAACTGCACCTGACATCTTCCGACAGCTCCCTCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR-3UTR TCA 90 bp | TCTAAGCAAGAGAAGAGGGAGCTGTCGGAAGATGTCAGGTGCAGTTCCTGCCTTGATGCTGCTGAGAGCTaGGGTACCCATCTCTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: SKQEKRELSEDVRCSSCLDAAES*GTHLSV Trigger: GACTGAGAGATGGGTACCTCAGCTCTCAGCAGCATC...AAGGCAGGAACTGCACCTGACATCTTCCGACAGCTCCCTCTTCTCTTGCTTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR-3UTR CCA 90 bp | TCTAAGCAAGAGAAGAGGGAGCTGTCGGAAGATGTCAGGTGCAGTTCCTGCCTTTTGTGGGTGGGTCCTTaGCTTTTTGTGGGGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: SKQEKRELSEDVRCSSCLLWVGP*LFVGLK Trigger: CTTCAGCCCCACAAAAAGCCAAGGACCCACCCACAA...AAGGCAGGAACTGCACCTGACATCTTCCGACAGCTCCCTCTTCTCTTGCTTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR-3UTR TCA 90 bp | AGCACTGCAGATGTCTCTGGTGCTTTAAGCCTTTCTAAGCAAGAGAAGAGGGAGCAAGAATTTAGGAGTTaGCTTTCTGGGCTGTGGCGG | + |
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Preference number: 2 (lower is better) Translates to: STADVSGALSLSKQEKREQEFRS*LSGLWR Trigger: CCGCCACAGCCCAGAAAGTCAACTCCTAAATTCTTG...CTCCCTCTTCTCTTGCTTAGAAAGGCTTAAAGCACCAGAGACATCTGCAGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR-3UTR GCA 90 bp | GCCAAGGCAGGAACAAATTCTAAGAAGCTGGCATCAGAACCGGCAGTACTGAGAGGATGGGATAAGCACTaGAGATGTCTCTGGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: AKAGTNSKKLASEPAVLRGWDKH*RCLWCF Trigger: AAAGCACCAGAGACATCTGCAGTGCTTATCCCATCC...TCTCAGTACTGCCGGTTCTGATGCCAGCTTCTTAGAATTTGTTCCTGCCTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR-3UTR CCA 90 bp | TTAAGCCTTTCTAAGCAAGAGAAGAGGGAGCTGTCGGAAGATGTCAGGTGCAGTGAAGGAGTTTGTGGGTaGGTCCTTGGCTTTTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: LSLSKQEKRELSEDVRCSEGVCG*VLGFLW Trigger: CCACAAAAAGCCAAGGACCCACCCACAAACTCCTTC...ACTGCACCTGACATCTTCCGACAGCTCCCTCTTCTCTTGCTTAGAAAGGCTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR-3UTR GCA 90 bp | CTTAAGGACAGGGTGCTGATAGGGAAGTTTGAGGAAATGGCCAGGGATGAAGGAAGAGGCCCTTCTCCTTaGCTTAGAATTCAATGCACA | + |
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Preference number: 2 (lower is better) Translates to: LKDRVLIGKFEEMARDEGRGPSP*LRIQCT Trigger: TGTGCATTGAATTCTAAGGCAAGGAGAAGGGCCTCT...TCCTTCATCCCTGGCCATTTCCTCAAACTTCCCTATCAGCACCCTGTCCTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAATAGGAAAGACTTCCCATCATTTTATAGGAATAGGGGAGAGGTAGGGACAGTCCACAAGGAAGGCTaGGGTGTTCTGAGGTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: FNRKDFPSFYRNRGEVGTVHKEG*GVLRWR Trigger: CCTCCACCTCAGAACACCCCAGCCTTCCTTGTGGAC...TGTCCCTACCTCTCCCCTATTCCTATAAAATGATGGGAAGTCTTTCCTATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR CAA 90 bp | GATCAGGTAAGGAAATGTTCTTTGCAGTGTTTATTTATCCAGTATTaGTTACTGATCACGTGTTCCAGTTCCCTCCTAGAAGCTGACCCC | + |
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Preference number: 2 (lower is better) Translates to: DQVRKCSLQCLFIQY*LLITCSSSLLEADP Trigger: GGGGTCAGCTTCTAGGAGGGAACTGGAACACGTGATCAGTAACAAATACTGGATAAATAAACACTGCAAAGAACATTTCCTTACCTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR-3UTR CAA 90 bp | TCCAGTTCCCTCCTAGAAGCTGACCCCGTGGCATTAAAGGAGCAAATCCTCTGGGGTGCAGTTCCTGCCTaGGAGGACTCTGCTGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: SSSLLEADPVALKEQILWGAVPA*EDSAEG Trigger: GCCCTCAGCAGAGTCCTCCAAGGCAGGAACTGCACC...CCAGAGGATTTGCTCCTTTAATGCCACGGGGTCAGCTTCTAGGAGGGAACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR TCA 72 bp | GATGTCAGGTGCAGTTCCTGCCTTGGAGGACTCTGCTaGGGGCCTACCTGTGCTGAGGATGTTCATGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: DVRCSSCLGGLC*GPTCAEDVHAG Trigger: TCCTGCATGAACATCCTCAGCACAGGTAGGCCCTCAGCAGAGTCCTCCAAGGCAGGAACTGCACCTGACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR-3UTR CAA 90 bp | GAGAAGAGGGAGCTGTCGGAAGATGTCAGGTGCAGTTCCTGCCTTGGAGGACTCTTTGTGGGTGGGTCCTaGGCTTTTTGTGGGGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: EKRELSEDVRCSSCLGGLFVGGS*AFCGAE Trigger: TTCAGCCCCACAAAAAGCCAAGGACCCACCCACAAA...GAGTCCTCCAAGGCAGGAACTGCACCTGACATCTTCCGACAGCTCCCTCTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR CCA 72 bp | AGGGGATCGGTTACTTTCTTGGTCCACAAGGAAGGCTaGGGTGTTCTGAGGTGGAGGGGAGCCAGTGTAGAT | + |
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Preference number: 3 (lower is better) Translates to: RGSVTFLVHKEG*GVLRWRGASVD Trigger: ATCTACACTGGCTCCCCTCCACCTCAGAACACCCCAGCCTTCCTTGTGGACCAAGAAAGTAACCGATCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR TCA 72 bp | GTTACTGATCACGTGTTCCAGTTCCCTCCTAGAAGCTaGCCCCGTGGCATTAAAGGAGCAAATCCTCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: VTDHVFQFPPRS*PRGIKGANPLG Trigger: ACCCAGAGGATTTGCTCCTTTAATGCCACGGGGTCAGCTTCTAGGAGGGAACTGGAACACGTGATCAGTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR TCA 72 bp | TTCTTCTTTCACTTCTCTGCACAAGAATTTAGGAGTTaGCTTTCTGGGCTGTGGCGGAGTCCCAGAATAGGA | + |
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Preference number: 3 (lower is better) Translates to: FFFHFSAQEFRS*LSGLWRSPRIG Trigger: TCCTATTCTGGGACTCCGCCACAGCCCAGAAAGTCAACTCCTAAATTCTTGTGCAGAGAAGTGAAAGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR TCA 72 bp | CAAATTCTAAGAAGCTGGCATCAGAACCGGCAGTACTaGGATCAGGTAAGGAAATGTTCTTTGCAGTGTTTA | + |
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Preference number: 3 (lower is better) Translates to: QILRSWHQNRQY*DQVRKCSLQCL Trigger: TAAACACTGCAAAGAACATTTCCTTACCTGATCTCAGTACTGCCGGTTCTGATGCCAGCTTCTTAGAATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR CAA 72 bp | GGGAGCTGTCGGAAGATGTCAGGTGCAGTTCCTGCCTaGGAGGACTCTGCTGAGGGCCTACCTGTGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: GSCRKMSGAVPA*EDSAEGLPVLR Trigger: CCTCAGCACAGGTAGGCCCTCAGCAGAGTCCTCCAAGGCAGGAACTGCACCTGACATCTTCCGACAGCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| CDS-3UTR TCA 90 bp | CTAAGCAAGAGAAGAGGGAGCTGTCGGAAGATGTCAGGTGCAGTTCCTGCCTTGTCTGAATGGAGGCGTTaGGGGACCCTCCCAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: LSKRRGSCRKMSGAVPALSEWRR*GTLPTR Trigger: CCTGGTTGGGAGGGTCCCTCAACGCCTCCATTCAGA...CAAGGCAGGAACTGCACCTGACATCTTCCGACAGCTCCCTCTTCTCTTGCTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| CDS-3UTR CCA 90 bp | GGGATCGGTTACTTTCTTGGTCCACAAGGAAGGCTGGGGTGTTCTGAGGTGGAGTTGACGACTGTCAGGTaGGAGGAGCATGTGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GIGYFLGPQGRLGCSEVELTTVR*EEHVAR Trigger: CCTGGCCACATGCTCCTCCCACCTGACAGTCGTCAA...CTCCACCTCAGAACACCCCAGCCTTCCTTGTGGACCAAGAAAGTAACCGATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| CDS-3UTR TCA 90 bp | GCCAAGGCAGGAACAAATTCTAAGAAGCTGGCATCAGAACCGGCAGTACTGAGAACACCCGGCGGCTCATaGGCACTGGGTATCGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: AKAGTNSKKLASEPAVLRTPGGS*ALGIAE Trigger: CTCTGCGATACCCAGTGCTCATGAGCCGCCGGGTGT...TCTCAGTACTGCCGGTTCTGATGCCAGCTTCTTAGAATTTGTTCCTGCCTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| CDS-3UTR GCA 90 bp | GAGAAGAGGGAGCTGTCGGAAGATGTCAGGTGCAGTTCCTGCCTTGGAGGACTCCATGGCCGTGTTGCCTaGCATAGCAAGGATGTAGAC | + |
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Preference number: 4 (lower is better) Translates to: EKRELSEDVRCSSCLGGLHGRVA*HSKDVD Trigger: GTCTACATCCTTGCTATGGCAGGCAACACGGCCATG...GAGTCCTCCAAGGCAGGAACTGCACCTGACATCTTCCGACAGCTCCCTCTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| CDS-3UTR CCA 90 bp | GCTGTCGGAAGATGTCAGGTGCAGTTCCTGCCTTGGAGGACTCTGCTGAGGGCCACCTCACAGAAGAAGTaGGAGATCTTCCGTGATCCA | + |
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Preference number: 4 (lower is better) Translates to: AVGRCQVQFLPWRTLLRATSQKK*EIFRDP Trigger: TGGATCACGGAAGATCTCCCACTTCTTCTGTGAGGT...GGCCCTCAGCAGAGTCCTCCAAGGCAGGAACTGCACCTGACATCTTCCGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| CDS-3UTR GCA 90 bp | CTAAGCAAGAGAAGAGGGAGCTGTCGGAAGATGTCAGGTGCAGTTCCTGCCTTGCAGCAGGAGGCACTCTaGAGCCCCCAAGAACATGAA | + |
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Preference number: 4 (lower is better) Translates to: LSKRRGSCRKMSGAVPALQQEAL*SPQEHE Trigger: TTCATGTTCTTGGGGGCTGCAGAGTGCCTCCTGCTG...CAAGGCAGGAACTGCACCTGACATCTTCCGACAGCTCCCTCTTCTCTTGCTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| CDS-3UTR TCA 90 bp | AGCGTGCTTAAGGACAGGGTGCTGATAGGGAAGTTTGAGGAAATGGCCAGGGATGTGGGAGATCTTCCGTaGTCCACAGTAGGGGAACTG | + |
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Preference number: 4 (lower is better) Translates to: SVLKDRVLIGKFEEMARDVGDLP*STVGEL Trigger: CAGTTCCCCTACTGTGGATCACGGAAGATCTCCCAC...ATCCCTGGCCATTTCCTCAAACTTCCCTATCAGCACCCTGTCCTTAAGCACGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| 3UTR CAA 72 bp | AGACTCTCAGTGATACAGAGGGGATCGGTTACTTTCTaGGTCCACAAGGAAGGCTGGGGTGTTCTGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RLSVIQRGSVTF*VHKEGWGVLRW Trigger: CCACCTCAGAACACCCCAGCCTTCCTTGTGGACCAAGAAAGTAACCGATCCCCTCTGTATCACTGAGAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| CDS-3UTR TCA 90 bp | CTAAGCAAGAGAAGAGGGAGCTGTCGGAAGATGTCAGGTGCAGTTCCTGCCTTGCAGCCCCCAAGAACATaGAGAAAAACATCTGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LSKRRGSCRKMSGAVPALQPPRT*RKTSVP Trigger: GGGCACAGATGTTTTTCTTCATGTTCTTGGGGGCTG...CAAGGCAGGAACTGCACCTGACATCTTCCGACAGCTCCCTCTTCTCTTGCTTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| CDS-3UTR GCA 90 bp | CTAAGCAAGAGAAGAGGGAGCTGTCGGAAGATGTCAGGTGCAGTTCCTGCCTTGAACCTCCGAAAGAGATaGTCGTCCAACCAAAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: LSKRRGSCRKMSGAVPALNLRKR*SSNQRE Trigger: TTCTCTTTGGTTGGACGAGCATCTCTTTCGGAGGTT...CAAGGCAGGAACTGCACCTGACATCTTCCGACAGCTCCCTCTTCTCTTGCTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| CDS-3UTR CCA 90 bp | TCCAGTTCCCTCCTAGAAGCTGACCCCGTGGCATTAAAGGAGCAAATCCTCTGGAGGAACAGGTGTGTCTaGCTGTTGTTAAAAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SSSLLEADPVALKEQILWRNRCV*LLLKRL Trigger: AAGCCTTTTTAACAACAGCCAGACACACCTGTTCCT...CCAGAGGATTTGCTCCTTTAATGCCACGGGGTCAGCTTCTAGGAGGGAACTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| CDS-3UTR GCA 90 bp | AAAGACTTCCCATCATTTTATAGGAATAGGGGAGAGGTAGGGACATGGAGTCATGAAGAAAAACATCTGTaGCCCACAACCTCCGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: KDFPSFYRNRGEVGTWSHEEKHL*PTTSER Trigger: TCTTTCGGAGGTTGTGGGGCACAGATGTTTTTCTTC...ATGACTCCATGTCCCTACCTCTCCCCTATTCCTATAAAATGATGGGAAGTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| CDS-3UTR GCA 90 bp | TTTAATAGGAAAGACTTCCCATCATTTTATAGGAATAGGGGAGAGGTAGGGACAGCCACACCTCCTCATTaGTTTCTTCATGGCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: FNRKDFPSFYRNRGEVGTATPPH*FLHGSC Trigger: ACAGGAGCCATGAAGAAAGCAATGAGGAGGTGTGGC...TGTCCCTACCTCTCCCCTATTCCTATAAAATGATGGGAAGTCTTTCCTATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| CDS-3UTR CAA 90 bp | AGCGTGCTTAAGGACAGGGTGCTGATAGGGAAGTTTGAGGAAATGGCCAGGGATCGCCACACCTCCTCATaGCTTTCTTCATGGCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: SVLKDRVLIGKFEEMARDRHTSS*LSSWLL Trigger: CAGGAGCCATGAAGAAAGCAATGAGGAGGTGTGGCG...ATCCCTGGCCATTTCCTCAAACTTCCCTATCAGCACCCTGTCCTTAAGCACGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| CDS GCA 90 bp | GAGTCGGGTGTCCATCCAAATCAGAAGGACCATGGCCGTGTTGCCTaGCATAGCAAGGATGTAGACCAACATCACCATGCTGAACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: ESGVHPNQKDHGRVA*HSKDVDQHHHAEQE Trigger: TTCCTGTTCAGCATGGTGATGTTGGTCTACATCCTTGCTATGGCAGGCAACACGGCCATGGTCCTTCTGATTTGGATGGACACCCGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055204.6 ENSMUST00000215691.2 |
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| CDS-3UTR CAA 90 bp | AAAGACTTCCCATCATTTTATAGGAATAGGGGAGAGGTAGGGACATGGAGTCATAGGTGTGTCTGGCTGTaGTTAAAAAGGCTTGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: KDFPSFYRNRGEVGTWSHRCVWL*LKRLVS Trigger: GCTGACAAGCCTTTTTAACAACAGCCAGACACACCT...ATGACTCCATGTCCCTACCTCTCCCCTATTCCTATAAAATGATGGGAAGTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215691.2 |
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| CDS GCA 72 bp | CTCTGCAGCCCCCAAGAACATGAAGAAAAACATCTGTaGCCCACAACCTCCGAAAGAGATGCTCGTCCAACC | + |
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Preference number: 6 (lower is better) Translates to: LCSPQEHEEKHL*PTTSERDARPT Trigger: GGTTGGACGAGCATCTCTTTCGGAGGTTGTGGGGCACAGATGTTTTTCTTCATGTTCTTGGGGGCTGCAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055204.6 ENSMUST00000215691.2 |
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| CDS GCA 72 bp | GTCCATCCAAATCAGAAGGACCATGGCCGTGTTGCCTaGCATAGCAAGGATGTAGACCAACATCACCATGCT | + |
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Preference number: 6 (lower is better) Translates to: VHPNQKDHGRVA*HSKDVDQHHHA Trigger: AGCATGGTGATGTTGGTCTACATCCTTGCTATGGCAGGCAACACGGCCATGGTCCTTCTGATTTGGATGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055204.6 ENSMUST00000215691.2 |
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| CDS CAA 72 bp | ATCACCATGCTGAACAGGAACAGGTGTGTCTGGCTGTaGTTAAAAAGGCTTGTCAGCACAAAGCCAGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: ITMLNRNRCVWL*LKRLVSTKPAV Trigger: CACCGCTGGCTTTGTGCTGACAAGCCTTTTTAACAACAGCCAGACACACCTGTTCCTGTTCAGCATGGTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055204.6 ENSMUST00000215691.2 |
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| CDS GCA 72 bp | AGAAAAACATCTGTGCCCCACAACCTCCGAAAGAGATaGTCGTCCAACCAAAGAGAAAGCCTACTATCATCT | + |
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Preference number: 6 (lower is better) Translates to: RKTSVPHNLRKR*SSNQRESLLSS Trigger: AGATGATAGTAGGCTTTCTCTTTGGTTGGACGAGCATCTCTTTCGGAGGTTGTGGGGCACAGATGTTTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055204.6 ENSMUST00000215691.2 |
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