Pregenerated sensors for OLFR299 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020168Ensembl transcript IDs: ENSMUST00000057734.4, ENSMUST00000217253.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAAGACTGTTTATGACCATCTTCTATATTCATAGATCTGTGACTTaGTCAGCCATCATCAGGACATTCTTCCTGGAGCATATGGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: KRLFMTIFYIHRSVT*SAIIRTFFLEHMGA Trigger: TGCTCCCATATGCTCCAGGAAGAATGTCCTGATGATGGCTGAGCAAGTCACAGATCTATGAATATAGAAGATGGTCATAAACAGTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR TCA 90 bp | ACAAATAAGATGGCCTCCTCTATAACAACAAGATCTATACACATATaGATTCACAGAGATGAGTTACCATGCATGGGTCTATATAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: TNKMASSITTRSIHI*IHRDELPCMGLYSS Trigger: AGAACTATATAGACCCATGCATGGTAACTCATCTCTGTGAATTCATATGTGTATAGATCTTGTTGTTATAGAGGAGGCCATCTTATTTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR CCA 90 bp | AACAGGAAGGGGTTATGTGGAGACACAGCTAAAAATCAGGGCCTTTaGAAGATTATTACAGAAATCTTGTTCAGTAGAATATTCTTAAAA | + |
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Preference number: 1 (lower is better) Translates to: NRKGLCGDTAKNQGL*KIITEILFSRIFLK Trigger: TTTTAAGAATATTCTACTGAACAAGATTTCTGTAATAATCTTCCAAAGGCCCTGATTTTTAGCTGTGTCTCCACATAACCCCTTCCTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCATCAGTTAAGAGCACTTGCTGCTCTTGCTGGAGAACTGATTTGGATCTCAGGTGGGTTGGGGGCCTaGAGTCAGAGGATTAAATGG | + |
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Preference number: 2 (lower is better) Translates to: LHQLRALAALAGELIWISGGLGA*SQRIKW Trigger: CCATTTAATCCTCTGACTCCAGGCCCCCAACCCACC...TGAGATCCAAATCAGTTCTCCAGCAAGAGCAGCAAGTGCTCTTAACTGATGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR CAA 90 bp | CACCTGGCCACCTATTGTCATCAAAATATGCTCCCAGGGTCAGGATaGGGTTATGACAAAGTGAATCTTTGGCCAAAGGAATCCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HLATYCHQNMLPGSG*GYDKVNLWPKESQE Trigger: TTCCTGGGATTCCTTTGGCCAAAGATTCACTTTGTCATAACCCAATCCTGACCCTGGGAGCATATTTTGATGACAATAGGTGGCCAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR-3UTR TCA 90 bp | TATTTGCTAGGGTTATGGGAACAACAACTTCATGAGAGTAACCAACCAATGTCTGTAAGGCCATCTCCATaGGATGGAGCCCATGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: YLLGLWEQQLHESNQPMSVRPSP*DGAHAP Trigger: GGGAGCATGGGCTCCATCTCATGGAGATGGCCTTAC...AGACATTGGTTGGTTACTCTCATGAAGTTGTTGTTCCCATAACCCTAGCAAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR-3UTR TCA 90 bp | GTGACTTGCTCAGCCATCATCAGGACATTCTTCCTGGAGCATATGGGAGCAAATGATATTATGAAAAAGTaGGAGACCATGGAGCTATCA | + |
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Preference number: 2 (lower is better) Translates to: VTCSAIIRTFFLEHMGANDIMKK*ETMELS Trigger: TGATAGCTCCATGGTCTCTCACTTTTTCATAATATC...ATTTGCTCCCATATGCTCCAGGAAGAATGTCCTGATGATGGCTGAGCAAGTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR-3UTR GCA 90 bp | GTGACTTGCTCAGCCATCATCAGGACATTCTTCCTGGAGCATATGGGAGCAAATAGTAAAAAGGGAAAATaGTTTGTAGGGTTGGTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: VTCSAIIRTFFLEHMGANSKKGK*FVGLVV Trigger: AACCACCAACCCTACAAAGCATTTTCCCTTTTTACT...ATTTGCTCCCATATGCTCCAGGAAGAATGTCCTGATGATGGCTGAGCAAGTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCATCAGTTAAGAGCACTTGCTGCTCTTGCTGGAGAACTGATTTGGATCTCAGTGTGCCTTCTCTTGTaGCTTGTGCTATTTTCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LHQLRALAALAGELIWISVCLLL*LVLFSV Trigger: AACTGAAAATAGCACAAGGCACAAGAGAAGGCACAC...TGAGATCCAAATCAGTTCTCCAGCAAGAGCAGCAAGTGCTCTTAACTGATGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCCTATAAAGTGCTGTAACTCCTACACTCCAGTGTATTTGTTACAGAAAAGTGTGTGTGTGTGTGTGTaGCTTCTCTTGTGCCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: VPIKCCNSYTPVYLLQKSVCVCV*LLLCLV Trigger: CACAAGGCACAAGAGAAGGCACACACACACACACAC...ACTTTTCTGTAACAAATACACTGGAGTGTAGGAGTTACAGCACTTTATAGGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCATCAGTTAAGAGCACTTGCTGCTCTTGCTGGAGAACTGATTTGGATCTCATCTTCCTGGAGCATATaGGAGCAAATACAGAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: LHQLRALAALAGELIWISSSWSI*EQIQKP Trigger: AGGTTTCTGTATTTGCTCCCATATGCTCCAGGAAGA...TGAGATCCAAATCAGTTCTCCAGCAAGAGCAGCAAGTGCTCTTAACTGATGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCATCAGTTAAGAGCACTTGCTGCTCTTGCTGGAGAACTGATTTGGATCTCAATACTAGAGCAGAAATaGGAAGTGGGCACATACATT | + |
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Preference number: 2 (lower is better) Translates to: LHQLRALAALAGELIWISILEQK*EVGTYI Trigger: AATGTATGTGCCCACTTCTCATTTCTGCTCTAGTAT...TGAGATCCAAATCAGTTCTCCAGCAAGAGCAGCAAGTGCTCTTAACTGATGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR-3UTR CCA 90 bp | GTGACTTGCTCAGCCATCATCAGGACATTCTTCCTGGAGCATATGGGAGCAAATAGCTATCAGCTTAAATaGAACATCTTCATCAAAACC | + |
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Preference number: 2 (lower is better) Translates to: VTCSAIIRTFFLEHMGANSYQLK*NIFIKT Trigger: GGTTTTGATGAAGATGTTCCATTTAAGCTGATAGCT...ATTTGCTCCCATATGCTCCAGGAAGAATGTCCTGATGATGGCTGAGCAAGTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR-3UTR CCA 90 bp | TATTTGCTAGGGTTATGGGAACAACAACTTCATGAGAGTAACCAACCAATGTCTTCAAAACCTTTCATCTaGGATCAGGAAGTCCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: YLLGLWEQQLHESNQPMSSKPFI*DQEVLC Trigger: GCACAGGACTTCCTGATCCCAGATGAAAGGTTTTGA...AGACATTGGTTGGTTACTCTCATGAAGTTGTTGTTCCCATAACCCTAGCAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR CAA 90 bp | GTGTGTGCCTTCTCTTGTGCCTTGTGCTATTTTCAGTTTCTTTGTTaGTTTAGTGCTATCATGTTTTATCCTAGAGGAACTAGGAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: VCAFSCALCYFQFLC*FSAIMFYPRGTRKN Trigger: ATTCTTCCTAGTTCCTCTAGGATAAAACATGATAGCACTAAACAAACAAAGAAACTGAAAATAGCACAAGGCACAAGAGAAGGCACACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR-3UTR TCA 90 bp | TATTTGCTAGGGTTATGGGAACAACAACTTCATGAGAGTAACCAACCAATGTCTTACAACCAGATATTATaGAAAAGTGAGAGACCATGG | + |
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Preference number: 2 (lower is better) Translates to: YLLGLWEQQLHESNQPMSYNQIL*KSERPW Trigger: CCATGGTCTCTCACTTTTTCATAATATCTGGTTGTA...AGACATTGGTTGGTTACTCTCATGAAGTTGTTGTTCCCATAACCCTAGCAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCCTATAAAGTGCTGTAACTCCTACACTCCAGTGTATTTGTTACAGAAAAGTTATTTGCTAGGGTTATaGGAACAACAACTTCATGAG | + |
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Preference number: 2 (lower is better) Translates to: VPIKCCNSYTPVYLLQKSYLLGL*EQQLHE Trigger: CTCATGAAGTTGTTGTTCCCATAACCCTAGCAAATA...ACTTTTCTGTAACAAATACACTGGAGTGTAGGAGTTACAGCACTTTATAGGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR CAA 90 bp | TGTTGCCTCATCCAGCCACCATATGAGGTTATATGCATAGTTTTATaGCATCATTTTATAGCAACTTCAATTAATATCACTGAGAGACCT | + |
|
Preference number: 2 (lower is better) Translates to: CCLIQPPYEVICIVL*HHFIATSINITERP Trigger: AGGTCTCTCAGTGATATTAATTGAAGTTGCTATAAAATGATGCAATAAAACTATGCATATAACCTCATATGGTGGCTGGATGAGGCAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR CCA 72 bp | CATCTCCATGAGATGGAGCCCATGCTCCCCATTTCCTaGCTAACCAAGAACCTGACTAGATACCTCCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: HLHEMEPMLPIS*LTKNLTRYLQD Trigger: GTCCTGGAGGTATCTAGTCAGGTTCTTGGTTAGCCAGGAAATGGGGAGCATGGGCTCCATCTCATGGAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR TCA 72 bp | AACAACTTCATGAGAGTAACCAACCAATGTCTGATTTaGGGTAAGGCCATCTCCATGAGATGGAGCCCATGC | + |
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Preference number: 3 (lower is better) Translates to: NNFMRVTNQCLI*GKAISMRWSPC Trigger: GCATGGGCTCCATCTCATGGAGATGGCCTTACCTCAAATCAGACATTGGTTGGTTACTCTCATGAAGTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR CCA 72 bp | GATGCTTCATCAGTTAAGAGCACTTGCTGCTCTTGCTaGAGAACTGATTTGGATCTCAATGTCCAGGTGGAA | + |
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Preference number: 3 (lower is better) Translates to: DASSVKSTCCSC*RTDLDLNVQVE Trigger: TTCCACCTGGACATTGAGATCCAAATCAGTTCTCCAGCAAGAGCAGCAAGTGCTCTTAACTGATGAAGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR TCA 72 bp | TCATCAAAATATGCTCCCAGGGTCAGGATTGGGTTATaGCAAAGTGAATCTTTGGCCAAAGGAATCCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: SSKYAPRVRIGL*QSESLAKGIPG Trigger: TCCTGGGATTCCTTTGGCCAAAGATTCACTTTGTCATAACCCAATCCTGACCCTGGGAGCATATTTTGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCATCAGTTAAGAGCACTTGCTGCTCTTGCTGGAGAACTGATTTGGATCTCAGCCTTCTCTTGTGCCTaGTGCTATTTTCAGTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: LHQLRALAALAGELIWISAFSCA*CYFQFL Trigger: AAGAAACTGAAAATAGCACAAGGCACAAGAGAAGGC...TGAGATCCAAATCAGTTCTCCAGCAAGAGCAGCAAGTGCTCTTAACTGATGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR CCA 72 bp | GCTCAGCCATCATCAGGACATTCTTCCTGGAGCATATaGGAGCAAATACAGAAACCTACAACCAGATATTAT | + |
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Preference number: 3 (lower is better) Translates to: AQPSSGHSSWSI*EQIQKPTTRYY Trigger: ATAATATCTGGTTGTAGGTTTCTGTATTTGCTCCCATATGCTCCAGGAAGAATGTCCTGATGATGGCTGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR CCA 72 bp | AAAATGGTGTCCCAGCTGCAATATTTGCTAGGGTTATaGGAACAACAACTTCATGAGAGTAACCAACCAATG | + |
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Preference number: 3 (lower is better) Translates to: KMVSQLQYLLGL*EQQLHESNQPM Trigger: CATTGGTTGGTTACTCTCATGAAGTTGTTGTTCCCATAACCCTAGCAAATATTGCAGCTGGGACACCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR GCA 72 bp | TTTATGACCATCTTCTATATTCATAGATCTGTGACTTaGTCAGCCATCATCAGGACATTCTTCCTGGAGCAT | + |
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Preference number: 3 (lower is better) Translates to: FMTIFYIHRSVT*SAIIRTFFLEH Trigger: ATGCTCCAGGAAGAATGTCCTGATGATGGCTGAGCAAGTCACAGATCTATGAATATAGAAGATGGTCATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR TCA 72 bp | ATGGCCTCCTCTATAACAACAAGATCTATACACATATaGATTCACAGAGATGAGTTACCATGCATGGGTCTA | + |
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Preference number: 3 (lower is better) Translates to: MASSITTRSIHI*IHRDELPCMGL Trigger: TAGACCCATGCATGGTAACTCATCTCTGTGAATTCATATGTGTATAGATCTTGTTGTTATAGAGGAGGCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR GCA 72 bp | ACTGAACATGGAAATGTTAAACTGGTGCCTATAAAGTaGTGTAACTCCTACACTCCAGTGTATTTGTTACAG | + |
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Preference number: 3 (lower is better) Translates to: TEHGNVKLVPIK*CNSYTPVYLLQ Trigger: CTGTAACAAATACACTGGAGTGTAGGAGTTACAGCACTTTATAGGCACCAGTTTAACATTTCCATGTTCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR TCA 72 bp | ATGGGAGCAAATACAGAAACCTACAACCAGATATTATaGAAAAGTGAGAGACCATGGAGCTATCAGCTTAAA | + |
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Preference number: 3 (lower is better) Translates to: MGANTETYNQIL*KSERPWSYQLK Trigger: TTTAAGCTGATAGCTCCATGGTCTCTCACTTTTTCATAATATCTGGTTGTAGGTTTCTGTATTTGCTCCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR CCA 72 bp | GGGTTATGTGGAGACACAGCTAAAAATCAGGGCCTTTaGAAGATTATTACAGAAATCTTGTTCAGTAGAATA | + |
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Preference number: 3 (lower is better) Translates to: GLCGDTAKNQGL*KIITEILFSRI Trigger: TATTCTACTGAACAAGATTTCTGTAATAATCTTCCAAAGGCCCTGATTTTTAGCTGTGTCTCCACATAACCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR CCA 72 bp | TACACATATGAATTCACAGAGATGAGTTACCATGCATaGGTCTATATAGTTCTCACCTTAAAAGATACTAGA | + |
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Preference number: 3 (lower is better) Translates to: YTYEFTEMSYHA*VYIVLTLKDTR Trigger: TCTAGTATCTTTTAAGGTGAGAACTATATAGACCCATGCATGGTAACTCATCTCTGTGAATTCATATGTGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR CAA 72 bp | AATAATGGGAGAGACAAAGTCCCACCTGGCCACCTATaGTCATCAAAATATGCTCCCAGGGTCAGGATTGGG | + |
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Preference number: 4 (lower is better) Translates to: NNGRDKVPPGHL*SSKYAPRVRIG Trigger: CCCAATCCTGACCCTGGGAGCATATTTTGATGACAATAGGTGGCCAGGTGGGACTTTGTCTCTCCCATTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| CDS-3UTR GCA 90 bp | TATTTGCTAGGGTTATGGGAACAACAACTTCATGAGAGTAACCAACCAATGTCTGGTTCCCGAACAGGCTaGCCAGGTACACCAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: YLLGLWEQQLHESNQPMSGSRTG*PGTPAG Trigger: TCCTGCTGGTGTACCTGGGCAGCCTGTTCGGGAACC...AGACATTGGTTGGTTACTCTCATGAAGTTGTTGTTCCCATAACCCTAGCAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR CAA 72 bp | GTTAAGAGCACTTGCTGCTCTTGCTGGAGAACTGATTaGGATCTCAATGTCCAGGTGGAACTGACCAACAGT | + |
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Preference number: 4 (lower is better) Translates to: VKSTCCSCWRTD*DLNVQVELTNS Trigger: ACTGTTGGTCAGTTCCACCTGGACATTGAGATCCAAATCAGTTCTCCAGCAAGAGCAGCAAGTGCTCTTAAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| CDS-3UTR TCA 90 bp | GTGACTTGCTCAGCCATCATCAGGACATTCTTCCTGGAGCATATGGGAGCAAATACAGTTGGAAAGTTTTaGAAGTGTGCACACTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: VTCSAIIRTFFLEHMGANTVGKF*KCAHLQ Trigger: TTGCAAGTGTGCACACTTTCAAAACTTTCCAACTGT...ATTTGCTCCCATATGCTCCAGGAAGAATGTCCTGATGATGGCTGAGCAAGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| CDS-3UTR GCA 90 bp | GTGACTTGCTCAGCCATCATCAGGACATTCTTCCTGGAGCATATGGGAGCAAATGAAAGTGTGCACACTTaGAATGATAAGAGAGCTATG | + |
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Preference number: 4 (lower is better) Translates to: VTCSAIIRTFFLEHMGANESVHT*NDKRAM Trigger: CATAGCTCTCTTATCATTGCAAGTGTGCACACTTTC...ATTTGCTCCCATATGCTCCAGGAAGAATGTCCTGATGATGGCTGAGCAAGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| CDS-3UTR TCA 90 bp | TATTTGCTAGGGTTATGGGAACAACAACTTCATGAGAGTAACCAACCAATGTCTAGAACTGGTGGTTCATaGTCACAGGGTAGAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: YLLGLWEQQLHESNQPMSRTGGS*SQGRAE Trigger: CTCTGCTCTACCCTGTGATCATGAACCACCAGTTCT...AGACATTGGTTGGTTACTCTCATGAAGTTGTTGTTCCCATAACCCTAGCAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| CDS-3UTR TCA 90 bp | TATTTGCTAGGGTTATGGGAACAACAACTTCATGAGAGTAACCAACCAATGTCTGAAGCCAGTGTCATCTaGACACAGAACTGGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: YLLGLWEQQLHESNQPMSEASVI*TQNWWF Trigger: GAACCACCAGTTCTGTGTTCAGATGACACTGGCTTC...AGACATTGGTTGGTTACTCTCATGAAGTTGTTGTTCCCATAACCCTAGCAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| CDS-3UTR TCA 90 bp | GTGCCTATAAAGTGCTGTAACTCCTACACTCCAGTGTATTTGTTACAGAAAAGTGACACCACAACAATGTaGGGGACACAGGTGGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: VPIKCCNSYTPVYLLQKSDTTTM*GTQVEK Trigger: CTTTTCCACCTGTGTCCCTCACATTGTTGTGGTGTC...ACTTTTCTGTAACAAATACACTGGAGTGTAGGAGTTACAGCACTTTATAGGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| CDS-3UTR CCA 90 bp | CTTCATCAGTTAAGAGCACTTGCTGCTCTTGCTGGAGAACTGATTTGGATCTCAGGTGTGTTCAGTGTCTaGTCAACTGTAGTAACAATG | + |
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Preference number: 4 (lower is better) Translates to: LHQLRALAALAGELIWISGVFSV*STVVTM Trigger: CATTGTTACTACAGTTGACCAGACACTGAACACACC...TGAGATCCAAATCAGTTCTCCAGCAAGAGCAGCAAGTGCTCTTAACTGATGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR CAA 72 bp | TATGTCTCCAGTAAAAAGGGAAAATGCTTTGTAGGGTaGGTGGTTGTAGTGGTGGTCATAGTAGTGGTCGTA | + |
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Preference number: 4 (lower is better) Translates to: YVSSKKGKCFVG*VVVVVVIVVVV Trigger: TACGACCACTACTATGACCACCACTACAACCACCAACCCTACAAAGCATTTTCCCTTTTTACTGGAGACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR CAA 72 bp | CCTATAAAGTGCTGTAACTCCTACACTCCAGTGTATTaGTTACAGAAAAGTACCTTCCACCACAGCAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: PIKCCNSYTPVY*LQKSTFHHSKA Trigger: TGCTTTGCTGTGGTGGAAGGTACTTTTCTGTAACAAATACACTGGAGTGTAGGAGTTACAGCACTTTATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR CAA 72 bp | ACCTATTGTCATCAAAATATGCTCCCAGGGTCAGGATaGGGTTATGACAAAGTGAATCTTTGGCCAAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: TYCHQNMLPGSG*GYDKVNLWPKE Trigger: TTCCTTTGGCCAAAGATTCACTTTGTCATAACCCAATCCTGACCCTGGGAGCATATTTTGATGACAATAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR CAA 72 bp | ATATGTGTGTGTGTGTGTGTGTGTGTGTGCCTTCTCTaGTGCCTTGTGCTATTTTCAGTTTCTTTGTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: ICVCVCVCVCLL*CLVLFSVSLFV Trigger: AACAAACAAAGAAACTGAAAATAGCACAAGGCACAAGAGAAGGCACACACACACACACACACACACACATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| CDS-3UTR TCA 90 bp | GTGCCTATAAAGTGCTGTAACTCCTACACTCCAGTGTATTTGTTACAGAAAAGTAAGCATTTGGGACAGTaGCAGAAACATAACACATGT | + |
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Preference number: 4 (lower is better) Translates to: VPIKCCNSYTPVYLLQKSKHLGQ*QKHNTC Trigger: ACATGTGTTATGTTTCTGTCACTGTCCCAAATGCTT...ACTTTTCTGTAACAAATACACTGGAGTGTAGGAGTTACAGCACTTTATAGGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| 3UTR CAA 72 bp | TTCTCTTGTGCCTTGTGCTATTTTCAGTTTCTTTGTTaGTTTAGTGCTATCATGTTTTATCCTAGAGGAACT | + |
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Preference number: 4 (lower is better) Translates to: FSCALCYFQFLC*FSAIMFYPRGT Trigger: AGTTCCTCTAGGATAAAACATGATAGCACTAAACAAACAAAGAAACTGAAAATAGCACAAGGCACAAGAGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| CDS-3UTR CAA 90 bp | CTTCATCAGTTAAGAGCACTTGCTGCTCTTGCTGGAGAACTGATTTGGATCTCATGGCCAGTGAGAGAGTaGAAACAAGCATTTGGGACA | + |
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Preference number: 5 (lower is better) Translates to: LHQLRALAALAGELIWISWPVRE*KQAFGT Trigger: TGTCCCAAATGCTTGTTTCAACTCTCTCACTGGCCA...TGAGATCCAAATCAGTTCTCCAGCAAGAGCAGCAAGTGCTCTTAACTGATGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| CDS-3UTR CAA 90 bp | TATTTGCTAGGGTTATGGGAACAACAACTTCATGAGAGTAACCAACCAATGTCTGACAGTTGGAAAGTTTaGAAAGTGTGCACACTTGCA | + |
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Preference number: 5 (lower is better) Translates to: YLLGLWEQQLHESNQPMSDSWKV*KVCTLA Trigger: TGCAAGTGTGCACACTTTCAAAACTTTCCAACTGTC...AGACATTGGTTGGTTACTCTCATGAAGTTGTTGTTCCCATAACCCTAGCAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| CDS-3UTR CAA 90 bp | GTGCCTATAAAGTGCTGTAACTCCTACACTCCAGTGTATTTGTTACAGAAAAGTGTGACAGAAGGACAGTaGGAAAGTTTTGAAAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: VPIKCCNSYTPVYLLQKSVTEGQ*ESFESV Trigger: CACACTTTCAAAACTTTCCAACTGTCCTTCTGTCAC...ACTTTTCTGTAACAAATACACTGGAGTGTAGGAGTTACAGCACTTTATAGGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217253.2 |
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| CDS CCA 72 bp | ATTTGTGCTGCACACCCAGTCACAGAAATATTCCTCTaGCCAGTGAGAGAGTTGAAACAAGCATTTGGGACA | + |
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Preference number: 6 (lower is better) Translates to: ICAAHPVTEIFL*PVRELKQAFGT Trigger: TGTCCCAAATGCTTGTTTCAACTCTCTCACTGGCCAGAGGAATATTTCTGTGACTGGGTGTGCAGCACAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057734.4 ENSMUST00000217253.2 |
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| CDS CAA 72 bp | GGGACACAGGTGGAAAAGGCTTTCCCTCTCTCTCCTTaGACAGGAACCTTCAACACAGTTGATAATATCCTA | + |
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Preference number: 6 (lower is better) Translates to: GTQVEKAFPLSP*TGTFNTVDNIL Trigger: TAGGATATTATCAACTGTGTTGAAGGTTCCTGTCAAAGGAGAGAGAGGGAAAGCCTTTTCCACCTGTGTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057734.4 ENSMUST00000217253.2 |
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