Pregenerated sensors for OLFR298 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062878Ensembl transcript IDs: ENSMUST00000077800.3, ENSMUST00000213223.2, ENSMUST00000216968.2, ENSMUST00000217110.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCCTTAGACTTGTAAGCCTGTTGTCTCTCATGTATAAGCAATGTTaGTATTCAATAGAAAGGGCAGAGAAGGAACGCACAAATTCCCAA | + |
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Preference number: 1 (lower is better) Translates to: FLRLVSLLSLMYKQC*YSIERAEKERTNSQ Trigger: TTGGGAATTTGTGCGTTCCTTCTCTGCCCTTTCTATTGAATAGCAACATTGCTTATACATGAGAGACAACAGGCTTACAAGTCTAAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR-3UTR CCA 90 bp | GAACGCACAAATTCCCAAACCTCCAGTGTCTCTCTGATAATAGTCTCAACCAGGCGGGTGGGTTGCTTCTaGCCTATTTGCTCTAATGAT | + |
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Preference number: 2 (lower is better) Translates to: ERTNSQTSSVSLIIVSTRRVGCF*PICSND Trigger: ATCATTAGAGCAAATAGGCCAGAAGCAACCCACCCG...CCTGGTTGAGACTATTATCAGAGAGACACTGGAGGTTTGGGAATTTGTGCGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR-3UTR TCA 90 bp | TCTAACACAACGTTTTTAAGTCATATGGCTCCTCCATTGGTGTCTCCAGTGAGGTACTTATTCAAGAACTaGGCCTACTGCAATCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: SNTTFLSHMAPPLVSPVRYLFKN*AYCNQG Trigger: GCCTTGATTGCAGTAGGCTCAGTTCTTGAATAAGTA...CCTCACTGGAGACACCAATGGAGGAGCCATATGACTTAAAAACGTTGTGTTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCATGAACCTTTCTGGCTTTTGATATCATCCTCACTCATATGTATTCACCATCGGGTGGGTTGCTTCTaGCCTATTTGCTCTAATGAT | + |
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Preference number: 2 (lower is better) Translates to: PHEPFWLLISSSLICIHHRVGCF*PICSND Trigger: ATCATTAGAGCAAATAGGCCAGAAGCAACCCACCCG...ATGGTGAATACATATGAGTGAGGATGATATCAAAAGCCAGAAAGGTTCATGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR-3UTR CCA 90 bp | TCTAACACAACGTTTTTAAGTCATATGGCTCCTCCATTGGTGTCTCCAGTGAGGCCCCATGAACCTTTCTaGCTTTTGATATCATCCTCA | + |
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Preference number: 2 (lower is better) Translates to: SNTTFLSHMAPPLVSPVRPHEPF*LLISSS Trigger: TGAGGATGATATCAAAAGCCAGAAAGGTTCATGGGG...CCTCACTGGAGACACCAATGGAGGAGCCATATGACTTAAAAACGTTGTGTTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR-3UTR CCA 90 bp | TCTAACACAACGTTTTTAAGTCATATGGCTCCTCCATTGGTGTCTCCAGTGAGGGATCTTGCTGAGAATTaGACGTTTTGTTTCCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: SNTTFLSHMAPPLVSPVRDLAEN*TFCFQH Trigger: GTGCTGGAAACAAAACGTCCAATTCTCAGCAAGATC...CCTCACTGGAGACACCAATGGAGGAGCCATATGACTTAAAAACGTTGTGTTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTCCTAGGATAGTCATAGAGTCTCCTTTCCCCAGTATTTGTTTTTGTTACTACTTATTCAAGAACTaGGCCTACTGCAATCAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: QAPRIVIESPFPSICFCYYLFKN*AYCNQG Trigger: GCCTTGATTGCAGTAGGCTCAGTTCTTGAATAAGTA...GTAACAAAAACAAATACTGGGGAAAGGAGACTCTATGACTATCCTAGGAGCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR-3UTR TCA 90 bp | TCTAACACAACGTTTTTAAGTCATATGGCTCCTCCATTGGTGTCTCCAGTGAGGAGAACTTGGCTTATATaGTCATTTTCTGGGTTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: SNTTFLSHMAPPLVSPVRRTWLI*SFSGFV Trigger: GACAAACCCAGAAAATGATCATATAAGCCAAGTTCT...CCTCACTGGAGACACCAATGGAGGAGCCATATGACTTAAAAACGTTGTGTTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR-3UTR GCA 90 bp | GAACGCACAAATTCCCAAACCTCCAGTGTCTCTCTGATAATAGTCTCAACCAGGTTCTGGGTTTGTCTTTaGCTCAAGAATTTGATACTT | + |
|
Preference number: 2 (lower is better) Translates to: ERTNSQTSSVSLIIVSTRFWVCL*LKNLIL Trigger: AAGTATCAAATTCTTGAGGCAAAGACAAACCCAGAA...CCTGGTTGAGACTATTATCAGAGAGACACTGGAGGTTTGGGAATTTGTGCGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR-3UTR CCA 90 bp | GAACGCACAAATTCCCAAACCTCCAGTGTCTCTCTGATAATAGTCTCAACCAGGTATATGATCATTTTCTaGGTTTGTCTTTGCCTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: ERTNSQTSSVSLIIVSTRYMIIF*VCLCLK Trigger: CTTGAGGCAAAGACAAACCCAGAAAATGATCATATA...CCTGGTTGAGACTATTATCAGAGAGACACTGGAGGTTTGGGAATTTGTGCGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCATGAACCTTTCTGGCTTTTGATATCATCCTCACTCATATGTATTCACCATACTTCATATGTTCAGTaGCACACAGCAAATCATTCC | + |
|
Preference number: 2 (lower is better) Translates to: PHEPFWLLISSSLICIHHTSYVQ*HTANHS Trigger: GGAATGATTTGCTGTGTGCCACTGAACATATGAAGT...ATGGTGAATACATATGAGTGAGGATGATATCAAAAGCCAGAAAGGTTCATGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCATGAACCTTTCTGGCTTTTGATATCATCCTCACTCATATGTATTCACCATAGAACTTGGCTTATATaGTCATTTTCTGGGTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: PHEPFWLLISSSLICIHHRTWLI*SFSGFV Trigger: GACAAACCCAGAAAATGATCATATAAGCCAAGTTCT...ATGGTGAATACATATGAGTGAGGATGATATCAAAAGCCAGAAAGGTTCATGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTCCTAGGATAGTCATAGAGTCTCCTTTCCCCAGTATTTGTTTTTGTTACTATATGATCATTTTCTaGGTTTGTCTTTGCCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: QAPRIVIESPFPSICFCYYMIIF*VCLCLK Trigger: CTTGAGGCAAAGACAAACCCAGAAAATGATCATATA...GTAACAAAAACAAATACTGGGGAAAGGAGACTCTATGACTATCCTAGGAGCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR-3UTR TCA 90 bp | AATATGTACTTCATATGTTCAGTGGCACACAGCAAATCATTCCATTCTAAAACCTACTTATTCAAGAACTaGGCCTACTGCAATCAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: NMYFICSVAHSKSFHSKTYLFKN*AYCNQG Trigger: GCCTTGATTGCAGTAGGCTCAGTTCTTGAATAAGTA...GGTTTTAGAATGGAATGATTTGCTGTGTGCCACTGAACATATGAAGTACATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCATGAACCTTTCTGGCTTTTGATATCATCCTCACTCATATGTATTCACCATTTCTGGGTTTGTCTTTaGCTCAAGAATTTGATACTT | + |
|
Preference number: 2 (lower is better) Translates to: PHEPFWLLISSSLICIHHFWVCL*LKNLIL Trigger: AAGTATCAAATTCTTGAGGCAAAGACAAACCCAGAA...ATGGTGAATACATATGAGTGAGGATGATATCAAAAGCCAGAAAGGTTCATGGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR-3UTR GCA 90 bp | GTAAGCCTGTTGTCTCTCATGTATAAGCAATGTTGCTATTCAATAGAAAGGGCATTCTGGGTTTGTCTTTaGCTCAAGAATTTGATACTT | + |
|
Preference number: 2 (lower is better) Translates to: VSLLSLMYKQCCYSIERAFWVCL*LKNLIL Trigger: AAGTATCAAATTCTTGAGGCAAAGACAAACCCAGAA...TGCCCTTTCTATTGAATAGCAACATTGCTTATACATGAGAGACAACAGGCTTAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGCACACAGCAAATCATTCCATTCTAAAACCTCAAGAATGAATAAACAAAACTATATGATCATTTTCTaGGTTTGTCTTTGCCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: VAHSKSFHSKTSRMNKQNYMIIF*VCLCLK Trigger: CTTGAGGCAAAGACAAACCCAGAAAATGATCATATA...GTTTTGTTTATTCATTCTTGAGGTTTTAGAATGGAATGATTTGCTGTGTGCCAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR-3UTR CAA 90 bp | GTAAGCCTGTTGTCTCTCATGTATAAGCAATGTTGCTATTCAATAGAAAGGGCAGATCATTTTCTGGGTTaGTCTTTGCCTCAAGAATTT | + |
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Preference number: 3 (lower is better) Translates to: VSLLSLMYKQCCYSIERADHFLG*SLPQEF Trigger: AAATTCTTGAGGCAAAGACAAACCCAGAAAATGATC...TGCCCTTTCTATTGAATAGCAACATTGCTTATACATGAGAGACAACAGGCTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR-3UTR CAA 90 bp | AATATGTACTTCATATGTTCAGTGGCACACAGCAAATCATTCCATTCTAAAACCGATCATTTTCTGGGTTaGTCTTTGCCTCAAGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: NMYFICSVAHSKSFHSKTDHFLG*SLPQEF Trigger: AAATTCTTGAGGCAAAGACAAACCCAGAAAATGATC...GGTTTTAGAATGGAATGATTTGCTGTGTGCCACTGAACATATGAAGTACATATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR GCA 72 bp | AACTTGGCTTATATGATCATTTTCTGGGTTTGTCTTTaGCTCAAGAATTTGATACTTATTCAAGAACTGAGC | + |
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Preference number: 3 (lower is better) Translates to: NLAYMIIFWVCL*LKNLILIQELS Trigger: GCTCAGTTCTTGAATAAGTATCAAATTCTTGAGGCAAAGACAAACCCAGAAAATGATCATATAAGCCAAGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CCA 90 bp | GAACGCACAAATTCCCAAACCTCCAGTGTCTCTCTGATAATAGTCTCAACCAGGGATGGGGGAGGCAGGTaGCAAATGCTTTGGACTGAC | + |
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Preference number: 4 (lower is better) Translates to: ERTNSQTSSVSLIIVSTRDGGGR*QMLWTD Trigger: GTCAGTCCAAAGCATTTGCCACCTGCCTCCCCCATC...CCTGGTTGAGACTATTATCAGAGAGACACTGGAGGTTTGGGAATTTGTGCGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CCA 90 bp | TCTAACACAACGTTTTTAAGTCATATGGCTCCTCCATTGGTGTCTCCAGTGAGGGATGGGGGAGGCAGGTaGCAAATGCTTTGGACTGAC | + |
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Preference number: 4 (lower is better) Translates to: SNTTFLSHMAPPLVSPVRDGGGR*QMLWTD Trigger: GTCAGTCCAAAGCATTTGCCACCTGCCTCCCCCATC...CCTCACTGGAGACACCAATGGAGGAGCCATATGACTTAAAAACGTTGTGTTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CCA 90 bp | GGGTGGGTTGCTTCTGGCCTATTTGCTCTAATGATTAGAGTAGTTAGCACAGAAGATGGGGGAGGCAGGTaGCAAATGCTTTGGACTGAC | + |
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Preference number: 4 (lower is better) Translates to: GWVASGLFALMIRVVSTEDGGGR*QMLWTD Trigger: GTCAGTCCAAAGCATTTGCCACCTGCCTCCCCCATC...TTCTGTGCTAACTACTCTAATCATTAGAGCAAATAGGCCAGAAGCAACCCACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR GCA 90 bp | TTTGATACTTATTCAAGAACTGAGCCTACTGCAATCAAGGCCGGGTGGGTTGCTGAGGCAGGTGGCAAATaGTTTGGACTGACCTTTAGT | + |
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Preference number: 4 (lower is better) Translates to: FDTYSRTEPTAIKAGWVAEAGGK*FGLTFS Trigger: ACTAAAGGTCAGTCCAAAGCATTTGCCACCTGCCTC...AGCAACCCACCCGGCCTTGATTGCAGTAGGCTCAGTTCTTGAATAAGTATCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CCA 90 bp | TCTAACACAACGTTTTTAAGTCATATGGCTCCTCCATTGGTGTCTCCAGTGAGGCTGAAAACAGTGAGATaGGGGAGGCAGGTGGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: SNTTFLSHMAPPLVSPVRLKTVR*GRQVAN Trigger: ATTTGCCACCTGCCTCCCCCATCTCACTGTTTTCAG...CCTCACTGGAGACACCAATGGAGGAGCCATATGACTTAAAAACGTTGTGTTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR TCA 90 bp | TTTGATACTTATTCAAGAACTGAGCCTACTGCAATCAAGGCCGGGTGGGTTGCTGCAAATGCTTTGGACTaGCCTTTAGTGGTAGGAATC | + |
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Preference number: 4 (lower is better) Translates to: FDTYSRTEPTAIKAGWVAANALD*PLVVGI Trigger: GATTCCTACCACTAAAGGTCAGTCCAAAGCATTTGC...AGCAACCCACCCGGCCTTGATTGCAGTAGGCTCAGTTCTTGAATAAGTATCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR GCA 90 bp | TCTAACACAACGTTTTTAAGTCATATGGCTCCTCCATTGGTGTCTCCAGTGAGGAATCACAGGATTAAGTaGTGGAGGCAACACAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: SNTTFLSHMAPPLVSPVRNHRIK*WRQHSV Trigger: CACACTGTGTTGCCTCCAGCACTTAATCCTGTGATT...CCTCACTGGAGACACCAATGGAGGAGCCATATGACTTAAAAACGTTGTGTTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CCA 90 bp | TTGCCTCAAGAATTTGATACTTATTCAAGAACTGAGCCTACTGCAATCAAGGCCCTGAAAACAGTGAGATaGGGGAGGCAGGTGGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: LPQEFDTYSRTEPTAIKALKTVR*GRQVAN Trigger: ATTTGCCACCTGCCTCCCCCATCTCACTGTTTTCAG...GGCCTTGATTGCAGTAGGCTCAGTTCTTGAATAAGTATCAAATTCTTGAGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CCA 90 bp | CCCCATGAACCTTTCTGGCTTTTGATATCATCCTCACTCATATGTATTCACCATCTGAAAACAGTGAGATaGGGGAGGCAGGTGGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: PHEPFWLLISSSLICIHHLKTVR*GRQVAN Trigger: ATTTGCCACCTGCCTCCCCCATCTCACTGTTTTCAG...ATGGTGAATACATATGAGTGAGGATGATATCAAAAGCCAGAAAGGTTCATGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR GCA 90 bp | CCCCATGAACCTTTCTGGCTTTTGATATCATCCTCACTCATATGTATTCACCATGAGGCAGGTGGCAAATaGTTTGGACTGACCTTTAGT | + |
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Preference number: 4 (lower is better) Translates to: PHEPFWLLISSSLICIHHEAGGK*FGLTFS Trigger: ACTAAAGGTCAGTCCAAAGCATTTGCCACCTGCCTC...ATGGTGAATACATATGAGTGAGGATGATATCAAAAGCCAGAAAGGTTCATGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CCA 90 bp | GGGTGGGTTGCTTCTGGCCTATTTGCTCTAATGATTAGAGTAGTTAGCACAGAAAAGTACATAGGTGTTTaGAGTTTCAGATCCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: GWVASGLFALMIRVVSTEKYIGV*SFRSRV Trigger: CACCCTGGATCTGAAACTCCAAACACCTATGTACTT...TTCTGTGCTAACTACTCTAATCATTAGAGCAAATAGGCCAGAAGCAACCCACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CCA 90 bp | GGGTGGGTTGCTTCTGGCCTATTTGCTCTAATGATTAGAGTAGTTAGCACAGAAATCACAGAAAAACTGTaGGATCACAATGGAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: GWVASGLFALMIRVVSTEITEKL*DHNGAT Trigger: TGTGGCTCCATTGTGATCCCACAGTTTTTCTGTGAT...TTCTGTGCTAACTACTCTAATCATTAGAGCAAATAGGCCAGAAGCAACCCACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR GCA 90 bp | GTAAGCCTGTTGTCTCTCATGTATAAGCAATGTTGCTATTCAATAGAAAGGGCAGAGGCAGGTGGCAAATaGTTTGGACTGACCTTTAGT | + |
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Preference number: 4 (lower is better) Translates to: VSLLSLMYKQCCYSIERAEAGGK*FGLTFS Trigger: ACTAAAGGTCAGTCCAAAGCATTTGCCACCTGCCTC...TGCCCTTTCTATTGAATAGCAACATTGCTTATACATGAGAGACAACAGGCTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR TCA 90 bp | CCCCATGAACCTTTCTGGCTTTTGATATCATCCTCACTCATATGTATTCACCATGGAGGTTACTCATTATaGCTGCAACGTACATTACCA | + |
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Preference number: 4 (lower is better) Translates to: PHEPFWLLISSSLICIHHGGYSL*LQRTLP Trigger: TGGTAATGTACGTTGCAGTCATAATGAGTAACCTCC...ATGGTGAATACATATGAGTGAGGATGATATCAAAAGCCAGAAAGGTTCATGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR TCA 90 bp | GTAAGCCTGTTGTCTCTCATGTATAAGCAATGTTGCTATTCAATAGAAAGGGCAGCAAATGCTTTGGACTaGCCTTTAGTGGTAGGAATC | + |
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Preference number: 4 (lower is better) Translates to: VSLLSLMYKQCCYSIERAANALD*PLVVGI Trigger: GATTCCTACCACTAAAGGTCAGTCCAAAGCATTTGC...TGCCCTTTCTATTGAATAGCAACATTGCTTATACATGAGAGACAACAGGCTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CCA 90 bp | TTGCCTCAAGAATTTGATACTTATTCAAGAACTGAGCCTACTGCAATCAAGGCCAAGTACATAGGTGTTTaGAGTTTCAGATCCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LPQEFDTYSRTEPTAIKAKYIGV*SFRSRV Trigger: CACCCTGGATCTGAAACTCCAAACACCTATGTACTT...GGCCTTGATTGCAGTAGGCTCAGTTCTTGAATAAGTATCAAATTCTTGAGGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR TCA 90 bp | GTGGCACACAGCAAATCATTCCATTCTAAAACCTCAAGAATGAATAAACAAAACGCAAATGCTTTGGACTaGCCTTTAGTGGTAGGAATC | + |
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Preference number: 4 (lower is better) Translates to: VAHSKSFHSKTSRMNKQNANALD*PLVVGI Trigger: GATTCCTACCACTAAAGGTCAGTCCAAAGCATTTGC...GTTTTGTTTATTCATTCTTGAGGTTTTAGAATGGAATGATTTGCTGTGTGCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR GCA 90 bp | GTGGCACACAGCAAATCATTCCATTCTAAAACCTCAAGAATGAATAAACAAAACAATCACAGGATTAAGTaGTGGAGGCAACACAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: VAHSKSFHSKTSRMNKQNNHRIK*WRQHSV Trigger: CACACTGTGTTGCCTCCAGCACTTAATCCTGTGATT...GTTTTGTTTATTCATTCTTGAGGTTTTAGAATGGAATGATTTGCTGTGTGCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR TCA 90 bp | AATATGTACTTCATATGTTCAGTGGCACACAGCAAATCATTCCATTCTAAAACCGGAGGTTACTCATTATaGCTGCAACGTACATTACCA | + |
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Preference number: 4 (lower is better) Translates to: NMYFICSVAHSKSFHSKTGGYSL*LQRTLP Trigger: TGGTAATGTACGTTGCAGTCATAATGAGTAACCTCC...GGTTTTAGAATGGAATGATTTGCTGTGTGCCACTGAACATATGAAGTACATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CCA 90 bp | AATATGTACTTCATATGTTCAGTGGCACACAGCAAATCATTCCATTCTAAAACCAAGTACATAGGTGTTTaGAGTTTCAGATCCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: NMYFICSVAHSKSFHSKTKYIGV*SFRSRV Trigger: CACCCTGGATCTGAAACTCCAAACACCTATGTACTT...GGTTTTAGAATGGAATGATTTGCTGTGTGCCACTGAACATATGAAGTACATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CCA 90 bp | AATATGTACTTCATATGTTCAGTGGCACACAGCAAATCATTCCATTCTAAAACCATCACAGAAAAACTGTaGGATCACAATGGAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: NMYFICSVAHSKSFHSKTITEKL*DHNGAT Trigger: TGTGGCTCCATTGTGATCCCACAGTTTTTCTGTGAT...GGTTTTAGAATGGAATGATTTGCTGTGTGCCACTGAACATATGAAGTACATATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CCA 90 bp | TTGCCTCAAGAATTTGATACTTATTCAAGAACTGAGCCTACTGCAATCAAGGCCGAATCTTCAGCACAGTaGAGAAAATGTAAAAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPQEFDTYSRTEPTAIKAESSAQ*RKCKSK Trigger: CTTACTTTTACATTTTCTCCACTGTGCTGAAGATTC...GGCCTTGATTGCAGTAGGCTCAGTTCTTGAATAAGTATCAAATTCTTGAGGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR CAA 72 bp | ATGGTATTCTACTCAGCTTCTTTTATTCTACACAGGTaGCCAAACCAGAAAATAAAGTTACCCACAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: MVFYSASFILHR*PNQKIKLPTAI Trigger: AATGGCTGTGGGTAACTTTATTTTCTGGTTTGGCAACCTGTGTAGAATAAAAGAAGCTGAGTAGAATACCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR CAA 72 bp | ATGATCATTTTCTGGGTTTGTCTTTGCCTCAAGAATTaGATACTTATTCAAGAACTGAGCCTACTGCAATCA | + |
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Preference number: 4 (lower is better) Translates to: MIIFWVCLCLKN*ILIQELSLLQS Trigger: TGATTGCAGTAGGCTCAGTTCTTGAATAAGTATCAAATTCTTGAGGCAAAGACAAACCCAGAAAATGATCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR CAA 72 bp | GAACTTGGCTTATATGATCATTTTCTGGGTTTGTCTTaGCCTCAAGAATTTGATACTTATTCAAGAACTGAG | + |
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Preference number: 4 (lower is better) Translates to: ELGLYDHFLGLS*PQEFDTYSRTE Trigger: CTCAGTTCTTGAATAAGTATCAAATTCTTGAGGCAAAGACAAACCCAGAAAATGATCATATAAGCCAAGTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| 3UTR CAA 72 bp | GATTATTTAGGCTCATTCCTTAGACTTGTAAGCCTGTaGTCTCTCATGTATAAGCAATGTTGCTATTCAATA | + |
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Preference number: 4 (lower is better) Translates to: DYLGSFLRLVSL*SLMYKQCCYSI Trigger: TATTGAATAGCAACATTGCTTATACATGAGAGACAACAGGCTTACAAGTCTAAGGAATGAGCCTAAATAATC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CCA 90 bp | GTGGCACACAGCAAATCATTCCATTCTAAAACCTCAAGAATGAATAAACAAAACGAATCTTCAGCACAGTaGAGAAAATGTAAAAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VAHSKSFHSKTSRMNKQNESSAQ*RKCKSK Trigger: CTTACTTTTACATTTTCTCCACTGTGCTGAAGATTC...GTTTTGTTTATTCATTCTTGAGGTTTTAGAATGGAATGATTTGCTGTGTGCCAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CAA 90 bp | GAACGCACAAATTCCCAAACCTCCAGTGTCTCTCTGATAATAGTCTCAACCAGGACAGCCTGTCTGAAATaGATGGTACAACTGAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ERTNSQTSSVSLIIVSTRTACLK*MVQLRV Trigger: CACCCTCAGTTGTACCATCAATTTCAGACAGGCTGT...CCTGGTTGAGACTATTATCAGAGAGACACTGGAGGTTTGGGAATTTGTGCGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CAA 90 bp | GAACGCACAAATTCCCAAACCTCCAGTGTCTCTCTGATAATAGTCTCAACCAGGAAAGTACATAGGTGTTaGGAGTTTCAGATCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ERTNSQTSSVSLIIVSTRKVHRC*EFQIQG Trigger: ACCCTGGATCTGAAACTCCAAACACCTATGTACTTT...CCTGGTTGAGACTATTATCAGAGAGACACTGGAGGTTTGGGAATTTGTGCGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CAA 90 bp | GGGTGGGTTGCTTCTGGCCTATTTGCTCTAATGATTAGAGTAGTTAGCACAGAATGGACAGAGATTTTGTaGCAACCTCTTCAAAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: GWVASGLFALMIRVVSTEWTEIL*QPLQST Trigger: CGTGCTTTGAAGAGGTTGCAACAAAATCTCTGTCCA...TTCTGTGCTAACTACTCTAATCATTAGAGCAAATAGGCCAGAAGCAACCCACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CAA 90 bp | TCTAACACAACGTTTTTAAGTCATATGGCTCCTCCATTGGTGTCTCCAGTGAGGTGGACAGAGATTTTGTaGCAACCTCTTCAAAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: SNTTFLSHMAPPLVSPVRWTEIL*QPLQST Trigger: CGTGCTTTGAAGAGGTTGCAACAAAATCTCTGTCCA...CCTCACTGGAGACACCAATGGAGGAGCCATATGACTTAAAAACGTTGTGTTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CAA 90 bp | TTTGATACTTATTCAAGAACTGAGCCTACTGCAATCAAGGCCGGGTGGGTTGCTACTTGGACAGAGATTTaGTTGCAACCTCTTCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FDTYSRTEPTAIKAGWVATWTEI*LQPLQS Trigger: GCTTTGAAGAGGTTGCAACAAAATCTCTGTCCAAGT...AGCAACCCACCCGGCCTTGATTGCAGTAGGCTCAGTTCTTGAATAAGTATCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CAA 90 bp | GAACGCACAAATTCCCAAACCTCCAGTGTCTCTCTGATAATAGTCTCAACCAGGACTTGGACAGAGATTTaGTTGCAACCTCTTCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ERTNSQTSSVSLIIVSTRTWTEI*LQPLQS Trigger: GCTTTGAAGAGGTTGCAACAAAATCTCTGTCCAAGT...CCTGGTTGAGACTATTATCAGAGAGACACTGGAGGTTTGGGAATTTGTGCGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CAA 90 bp | CCCCATGAACCTTTCTGGCTTTTGATATCATCCTCACTCATATGTATTCACCATACAGCCTGTCTGAAATaGATGGTACAACTGAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PHEPFWLLISSSLICIHHTACLK*MVQLRV Trigger: CACCCTCAGTTGTACCATCAATTTCAGACAGGCTGT...ATGGTGAATACATATGAGTGAGGATGATATCAAAAGCCAGAAAGGTTCATGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CAA 90 bp | GGGTGGGTTGCTTCTGGCCTATTTGCTCTAATGATTAGAGTAGTTAGCACAGAACATGAAGTGAACCACTaGGACAGAGATTTTGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GWVASGLFALMIRVVSTEHEVNH*DRDFVA Trigger: TGCAACAAAATCTCTGTCCAAGTGGTTCACTTCATG...TTCTGTGCTAACTACTCTAATCATTAGAGCAAATAGGCCAGAAGCAACCCACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CAA 90 bp | TCTAACACAACGTTTTTAAGTCATATGGCTCCTCCATTGGTGTCTCCAGTGAGGCATGAAGTGAACCACTaGGACAGAGATTTTGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SNTTFLSHMAPPLVSPVRHEVNH*DRDFVA Trigger: TGCAACAAAATCTCTGTCCAAGTGGTTCACTTCATG...CCTCACTGGAGACACCAATGGAGGAGCCATATGACTTAAAAACGTTGTGTTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CAA 90 bp | GAACGCACAAATTCCCAAACCTCCAGTGTCTCTCTGATAATAGTCTCAACCAGGGGCAGTTACTTTGAATaGTTACATGAAGTGAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: ERTNSQTSSVSLIIVSTRGSYFE*LHEVNH Trigger: GTGGTTCACTTCATGTAACAATTCAAAGTAACTGCC...CCTGGTTGAGACTATTATCAGAGAGACACTGGAGGTTTGGGAATTTGTGCGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CAA 90 bp | TTGCCTCAAGAATTTGATACTTATTCAAGAACTGAGCCTACTGCAATCAAGGCCTGGACAGAGATTTTGTaGCAACCTCTTCAAAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: LPQEFDTYSRTEPTAIKAWTEIL*QPLQST Trigger: CGTGCTTTGAAGAGGTTGCAACAAAATCTCTGTCCA...GGCCTTGATTGCAGTAGGCTCAGTTCTTGAATAAGTATCAAATTCTTGAGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CAA 90 bp | CAGGCTCCTAGGATAGTCATAGAGTCTCCTTTCCCCAGTATTTGTTTTTGTTACACTTGGACAGAGATTTaGTTGCAACCTCTTCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QAPRIVIESPFPSICFCYTWTEI*LQPLQS Trigger: GCTTTGAAGAGGTTGCAACAAAATCTCTGTCCAAGT...GTAACAAAAACAAATACTGGGGAAAGGAGACTCTATGACTATCCTAGGAGCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CAA 90 bp | GTAAGCCTGTTGTCTCTCATGTATAAGCAATGTTGCTATTCAATAGAAAGGGCACTCTTCAAAGCACGCTaGACATCACTATTTCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSLLSLMYKQCCYSIERALFKAR*TSLFLR Trigger: CCTGAGAAATAGTGATGTCAAGCGTGCTTTGAAGAG...TGCCCTTTCTATTGAATAGCAACATTGCTTATACATGAGAGACAACAGGCTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CAA 90 bp | TTGCCTCAAGAATTTGATACTTATTCAAGAACTGAGCCTACTGCAATCAAGGCCCATGAAGTGAACCACTaGGACAGAGATTTTGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPQEFDTYSRTEPTAIKAHEVNH*DRDFVA Trigger: TGCAACAAAATCTCTGTCCAAGTGGTTCACTTCATG...GGCCTTGATTGCAGTAGGCTCAGTTCTTGAATAAGTATCAAATTCTTGAGGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CAA 90 bp | CCCCATGAACCTTTCTGGCTTTTGATATCATCCTCACTCATATGTATTCACCATGGCAGTTACTTTGAATaGTTACATGAAGTGAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: PHEPFWLLISSSLICIHHGSYFE*LHEVNH Trigger: GTGGTTCACTTCATGTAACAATTCAAAGTAACTGCC...ATGGTGAATACATATGAGTGAGGATGATATCAAAAGCCAGAAAGGTTCATGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS-3UTR CAA 90 bp | GTGGCACACAGCAAATCATTCCATTCTAAAACCTCAAGAATGAATAAACAAAACAAAGTACATAGGTGTTaGGAGTTTCAGATCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VAHSKSFHSKTSRMNKQNKVHRC*EFQIQG Trigger: ACCCTGGATCTGAAACTCCAAACACCTATGTACTTT...GTTTTGTTTATTCATTCTTGAGGTTTTAGAATGGAATGATTTGCTGTGTGCCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS GCA 72 bp | ACTGAAAACAGTGAGATGGGGGAGGCAGGTGGCAAATaGTTTGGACTGACCTTTAGTGGTAGGAATCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: TENSEMGEAGGK*FGLTFSGRNLQ Trigger: CTGAAGATTCCTACCACTAAAGGTCAGTCCAAAGCATTTGCCACCTGCCTCCCCCATCTCACTGTTTTCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077800.3 ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS GCA 72 bp | GATGAGTGTGATGAGGAGGAGGTTACTCATTATGACTaGAACGTACATTACCAGAAAGAACAGCCCACATAC | + |
|
Preference number: 6 (lower is better) Translates to: DECDEEEVTHYD*NVHYQKEQPTY Trigger: GTATGTGGGCTGTTCTTTCTGGTAATGTACGTTGCAGTCATAATGAGTAACCTCCTCCTCATCACACTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077800.3 ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS CAA 72 bp | ACACAGTGTGTAGCACAGAAAACAGCCTGTCTGAAATaGATGGTACAACTGAGGGTGGCTTCAGATAGACAA | + |
|
Preference number: 6 (lower is better) Translates to: TQCVAQKTACLK*MVQLRVASDRQ Trigger: TTGTCTATCTGAAGCCACCCTCAGTTGTACCATCAATTTCAGACAGGCTGTTTTCTGTGCTACACACTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077800.3 ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS TCA 72 bp | AAACCATGGGCAGTTACTTTGAATTGTTACATGAAGTaGACCACTTGGACAGAGATTTTGTTGCAACCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: KPWAVTLNCYMK*TTWTEILLQPL Trigger: AAGAGGTTGCAACAAAATCTCTGTCCAAGTGGTTCACTTCATGTAACAATTCAAAGTAACTGCCCATGGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077800.3 ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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| CDS CAA 72 bp | TATGTGAGCCACAAAACCATGGGCAGTTACTTTGAATaGTTACATGAAGTGAACCACTTGGACAGAGATTTT | + |
|
Preference number: 6 (lower is better) Translates to: YVSHKTMGSYFE*LHEVNHLDRDF Trigger: AAAATCTCTGTCCAAGTGGTTCACTTCATGTAACAATTCAAAGTAACTGCCCATGGTTTTGTGGCTCACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077800.3 ENSMUST00000213223.2 ENSMUST00000216968.2 ENSMUST00000217110.2 |
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