Pregenerated sensors for OLFR295 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059319Ensembl transcript IDs: ENSMUST00000078447.2, ENSMUST00000215365.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGTCTCTTATAAGCTGGGACATTCTAGAGAGCTGGCCCACTTCTaGCAGGTGGCAACACTAGGGAGAAGAGGCCCTGTGCCTTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: PVSYKLGHSRELAHF*QVATLGRRGPVPCP Trigger: TGGGCAAGGCACAGGGCCTCTTCTCCCTAGTGTTGCCACCTGTCAGAAGTGGGCCAGCTCTCTAGAATGTCCCAGCTTATAAGAGACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR CCA 90 bp | CTGGATGTGAAGGTAATGCTTTCCCTGTTCCCCATTTGCCACCAGTaGGAGTTGGGAGAGCAGCCTCACAGGGCATGGAAGCCTGATAGC | + |
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Preference number: 1 (lower is better) Translates to: LDVKVMLSLFPICHQ*ELGEQPHRAWKPDS Trigger: GCTATCAGGCTTCCATGCCCTGTGAGGCTGCTCTCCCAACTCCCACTGGTGGCAAATGGGGAACAGGGAAAGCATTACCTTCACATCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR TCA 90 bp | GAGGGCAATAGCTCAGAGAGAATTGGCCTTCCTACTCTCCTGTGGTaGGGTGGCCTGGATGTGAAGGTAATGCTTTCCCTGTTCCCCATT | + |
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Preference number: 1 (lower is better) Translates to: EGNSSERIGLPTLLW*GGLDVKVMLSLFPI Trigger: AATGGGGAACAGGGAAAGCATTACCTTCACATCCAGGCCACCTCACCACAGGAGAGTAGGAAGGCCAATTCTCTCTGAGCTATTGCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR TCA 90 bp | GGGCATGGAAGCCTGATAGCTAACCCTGCCCCATCACTACCTGTATaGCTTGGGCTTCTAAGTGGAGCTAGCTTTAACAGCAAAGGCACA | + |
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Preference number: 1 (lower is better) Translates to: GHGSLIANPAPSLPV*LGLLSGASFNSKGT Trigger: TGTGCCTTTGCTGTTAAAGCTAGCTCCACTTAGAAGCCCAAGTCATACAGGTAGTGATGGGGCAGGGTTAGCTATCAGGCTTCCATGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR TCA 90 bp | GGGACCAAAATGGGAGAATTAGTGTTGAGGAAGAGAAGAAGTAGATaGGGAAGGGAATGGAGGAAGTCACAGCTCACAACAATGTCTTGT | + |
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Preference number: 1 (lower is better) Translates to: GTKMGELVLRKRRSR*GREWRKSQLTTMSC Trigger: ACAAGACATTGTTGTGAGCTGTGACTTCCTCCATTCCCTTCCTCATCTACTTCTTCTCTTCCTCAACACTAATTCTCCCATTTTGGTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR GCA 90 bp | AGACAAACCTATACTTCTCTACTGAACATGGAAATGCCAAGCTGGTaGCTACAGTGTGCCTTAACTCCTATAAATAGTGTGTTTTCTACA | + |
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Preference number: 1 (lower is better) Translates to: RQTYTSLLNMEMPSW*LQCALTPINSVFST Trigger: TGTAGAAAACACACTATTTATAGGAGTTAAGGCACACTGTAGGCACCAGCTTGGCATTTCCATGTTCAGTAGAGAAGTATAGGTTTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR CCA 90 bp | AGTCTTATTTTTAAGTGCAATTATGTGTATATAGGAGCACATGGATaGGGGATGAGGTTAGAAGGACAAGTGAGTAGGAAAGTACTAGGG | + |
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Preference number: 1 (lower is better) Translates to: SLIFKCNYVYIGAHG*GMRLEGQVSRKVLG Trigger: CCCTAGTACTTTCCTACTCACTTGTCCTTCTAACCTCATCCCCCATCCATGTGCTCCTATATACACATAATTGCACTTAAAAATAAGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR TCA 90 bp | TGGGGGATGAGGTTAGAAGGACAAGTGAGTAGGAAAGTACTAGGGTaGGAAGAGGGAAGGGAAATAATAAGCAGTATATATAATGTAAAA | + |
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Preference number: 1 (lower is better) Translates to: WGMRLEGQVSRKVLG*EEGREIISSIYNVK Trigger: TTTTACATTATATATACTGCTTATTATTTCCCTTCCCTCTTCTCACCCTAGTACTTTCCTACTCACTTGTCCTTCTAACCTCATCCCCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR CCA 90 bp | GTTATGAAAAGATTGAGAAATCTTGGATCAATCATCTCTAAATGGTaGGCTGCCTATATCAAATCTTTCTCATCTGGGATCAGCAAGCAT | + |
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Preference number: 1 (lower is better) Translates to: VMKRLRNLGSIISKW*AAYIKSFSSGISKH Trigger: ATGCTTGCTGATCCCAGATGAGAAAGATTTGATATAGGCAGCCCACCATTTAGAGATGATTGATCCAAGATTTCTCAATCTTTTCATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR CAA 90 bp | GTGAGGTGGCCTGGATGTGAAGGTAATGCTTTCCCTGTTCCCCATTaGCCACCAGTGGGAGTTGGGAGAGCAGCCTCACAGGGCATGGAA | + |
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Preference number: 2 (lower is better) Translates to: VRWPGCEGNAFPVPH*PPVGVGRAASQGME Trigger: TTCCATGCCCTGTGAGGCTGCTCTCCCAACTCCCACTGGTGGCAAATGGGGAACAGGGAAAGCATTACCTTCACATCCAGGCCACCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGGTGGCAACACTAGGGAGAAGAGGCCCTGTGCCTTGCCCACGCATGACAGTCAGCAAAGGCACAGATaGACTAGCTTGGAGGTTATC | + |
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Preference number: 2 (lower is better) Translates to: TGGNTREKRPCALPTHDSQQRHR*TSLEVI Trigger: GATAACCTCCAAGCTAGTTCATCTGTGCCTTTGCTG...ACTGTCATGCGTGGGCAAGGCACAGGGCCTCTTCTCCCTAGTGTTGCCACCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGGTGGCAACACTAGGGAGAAGAGGCCCTGTGCCTTGCCCACGCATGACAGTGTGTGGGACAAACTATaGCATACTAAAAGTTTCGTG | + |
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Preference number: 2 (lower is better) Translates to: TGGNTREKRPCALPTHDSVWDKL*HTKSFV Trigger: CACGAAACTTTTAGTATGTCATAGTTTGTCCCACAC...ACTGTCATGCGTGGGCAAGGCACAGGGCCTCTTCTCCCTAGTGTTGCCACCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTGGGTGAGTTGGGACCAAAATGGGAGAATTAGTGTTGAGGAAGAGAAGAAGATAGGAGCACATGGATaGGGGATGAGGTTAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: EWVSWDQNGRISVEEEKKIGAHG*GMRLEG Trigger: TCCTTCTAACCTCATCCCCCATCCATGTGCTCCTAT...CTTCTTCTCTTCCTCAACACTAATTCTCCCATTTTGGTCCCAACTCACCCACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR CAA 90 bp | CAACAGTGCCACAAAGTTTGTGGGAGTGACCGACCAATATCTGATTaGACTTTAGTTATAAGCCCTGAGACAGAAGCCATACCCAACACT | + |
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Preference number: 2 (lower is better) Translates to: QQCHKVCGSDRPISD*TLVISPETEAIPNT Trigger: AGTGTTGGGTATGGCTTCTGTCTCAGGGCTTATAACTAAAGTCAAATCAGATATTGGTCGGTCACTCCCACAAACTTTGTGGCACTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTGGGTGAGTTGGGACCAAAATGGGAGAATTAGTGTTGAGGAAGAGAAGAAGACCACGTCTATGGATTaGTCTCTAAACACTGACAGT | + |
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Preference number: 2 (lower is better) Translates to: EWVSWDQNGRISVEEEKKTTSMD*SLNTDS Trigger: ACTGTCAGTGTTTAGAGAGCAATCCATAGACGTGGT...CTTCTTCTCTTCCTCAACACTAATTCTCCCATTTTGGTCCCAACTCACCCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGATGTAATATTGATTGGTCTGTCAAATCCAGAGACCTTGAACCAGACCAATAGGAAAGTACTAGGGTaGGAAGAGGGAAGGGAAATA | + |
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Preference number: 2 (lower is better) Translates to: VDVILIGLSNPETLNQTNRKVLG*EEGREI Trigger: TATTTCCCTTCCCTCTTCTCACCCTAGTACTTTCCT...ATTGGTCTGGTTCAAGGTCTCTGGATTTGACAGACCAATCAATATTACATCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTGGGTGAGTTGGGACCAAAATGGGAGAATTAGTGTTGAGGAAGAGAAGAAGCACTATGTAATAAATTaGTGTCTTGCTCAGCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: EWVSWDQNGRISVEEEKKHYVIN*CLAQLS Trigger: TGAGAGCTGAGCAAGACAGCAATTTATTACATAGTG...CTTCTTCTCTTCCTCAACACTAATTCTCCCATTTTGGTCCCAACTCACCCACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGATGTAATATTGATTGGTCTGTCAAATCCAGAGACCTTGAACCAGACCAATGTATATAGGAGCACATaGATGGGGGATGAGGTTAGA | + |
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Preference number: 2 (lower is better) Translates to: VDVILIGLSNPETLNQTNVYRST*MGDEVR Trigger: TCTAACCTCATCCCCCATCCATGTGCTCCTATATAC...ATTGGTCTGGTTCAAGGTCTCTGGATTTGACAGACCAATCAATATTACATCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGATGTAATATTGATTGGTCTGTCAAATCCAGAGACCTTGAACCAGACCAATTGTTTGAGCCTGAGATaGTGGAGGACACTAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: VDVILIGLSNPETLNQTNCLSLR*WRTLRK Trigger: TTTTCTTAGTGTCCTCCATCATCTCAGGCTCAAACA...ATTGGTCTGGTTCAAGGTCTCTGGATTTGACAGACCAATCAATATTACATCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGATGTAATATTGATTGGTCTGTCAAATCCAGAGACCTTGAACCAGACCAATCAACCTACAGGGAATTaGAAAATAATGGAGAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: VDVILIGLSNPETLNQTNQPTGN*KIMESP Trigger: GGGACTCTCCATTATTTTGCAATTCCCTGTAGGTTG...ATTGGTCTGGTTCAAGGTCTCTGGATTTGACAGACCAATCAATATTACATCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGATGTAATATTGATTGGTCTGTCAAATCCAGAGACCTTGAACCAGACCAATAGTAAGGTCTATTGCTaGAGACAAACCTATACTTCT | + |
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Preference number: 2 (lower is better) Translates to: VDVILIGLSNPETLNQTNSKVYC*RQTYTS Trigger: AGAAGTATAGGTTTGTCTTCAGCAATAGACCTTACT...ATTGGTCTGGTTCAAGGTCTCTGGATTTGACAGACCAATCAATATTACATCCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGATGTAATATTGATTGGTCTGTCAAATCCAGAGACCTTGAACCAGACCAATCAGACCTTGTATCTTTaGATCTTGTTATGCCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: VDVILIGLSNPETLNQTNQTLYL*ILLCQV Trigger: AACTTGGCATAACAAGATGCAAAGATACAAGGTCTG...ATTGGTCTGGTTCAAGGTCTCTGGATTTGACAGACCAATCAATATTACATCCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGATGTAATATTGATTGGTCTGTCAAATCCAGAGACCTTGAACCAGACCAATATCATCTCTAAATGGTaGGCTGCCTATATCAAATCT | + |
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Preference number: 2 (lower is better) Translates to: VDVILIGLSNPETLNQTNIISKW*AAYIKS Trigger: AGATTTGATATAGGCAGCCCACCATTTAGAGATGAT...ATTGGTCTGGTTCAAGGTCTCTGGATTTGACAGACCAATCAATATTACATCCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGGTGGCAACACTAGGGAGAAGAGGCCCTGTGCCTTGCCCACGCATGACAGTTGCCACCAGTGGGAGTaGGGAGAGCAGCCTCACAGG | + |
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Preference number: 3 (lower is better) Translates to: TGGNTREKRPCALPTHDSCHQWE*GEQPHR Trigger: CCTGTGAGGCTGCTCTCCCAACTCCCACTGGTGGCA...ACTGTCATGCGTGGGCAAGGCACAGGGCCTCTTCTCCCTAGTGTTGCCACCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR GCA 72 bp | CAGGTGGCAACACTAGGGAGAAGAGGCCCTGTGCCTTaGCCACGCATGACAGTGAATCTGGCTCTGGTCGCT | + |
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Preference number: 3 (lower is better) Translates to: QVATLGRRGPVP*PRMTVNLALVA Trigger: AGCGACCAGAGCCAGATTCACTGTCATGCGTGGGCAAGGCACAGGGCCTCTTCTCCCTAGTGTTGCCACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGGTGGCAACACTAGGGAGAAGAGGCCCTGTGCCTTGCCCACGCATGACAGTTTCCCTGTTCCCCATTaGCCACCAGTGGGAGTTGGG | + |
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Preference number: 3 (lower is better) Translates to: TGGNTREKRPCALPTHDSFPVPH*PPVGVG Trigger: CCCAACTCCCACTGGTGGCAAATGGGGAACAGGGAA...ACTGTCATGCGTGGGCAAGGCACAGGGCCTCTTCTCCCTAGTGTTGCCACCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR GCA 72 bp | CTGGATGTGAAGGTAATGCTTTCCCTGTTCCCCATTTaGCACCAGTGGGAGTTGGGAGAGCAGCCTCACAGG | + |
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Preference number: 3 (lower is better) Translates to: LDVKVMLSLFPI*HQWELGEQPHR Trigger: CCTGTGAGGCTGCTCTCCCAACTCCCACTGGTGGCAAATGGGGAACAGGGAAAGCATTACCTTCACATCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR CCA 72 bp | AAGGTAATGCTTTCCCTGTTCCCCATTTGCCACCAGTaGGAGTTGGGAGAGCAGCCTCACAGGGCATGGAAG | + |
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Preference number: 3 (lower is better) Translates to: KVMLSLFPICHQ*ELGEQPHRAWK Trigger: CTTCCATGCCCTGTGAGGCTGCTCTCCCAACTCCCACTGGTGGCAAATGGGGAACAGGGAAAGCATTACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR TCA 72 bp | TATAAGCTGGGACATTCTAGAGAGCTGGCCCACTTCTaGCAGGTGGCAACACTAGGGAGAAGAGGCCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: YKLGHSRELAHF*QVATLGRRGPV Trigger: CACAGGGCCTCTTCTCCCTAGTGTTGCCACCTGTCAGAAGTGGGCCAGCTCTCTAGAATGTCCCAGCTTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGGTGGCAACACTAGGGAGAAGAGGCCCTGTGCCTTGCCCACGCATGACAGTCCACTATGTAATAAATaGCTGTCTTGCTCAGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: TGGNTREKRPCALPTHDSPLCNK*LSCSAL Trigger: GAGAGCTGAGCAAGACAGCAATTTATTACATAGTGG...ACTGTCATGCGTGGGCAAGGCACAGGGCCTCTTCTCCCTAGTGTTGCCACCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGGTGGCAACACTAGGGAGAAGAGGCCCTGTGCCTTGCCCACGCATGACAGTACAGACCTTGTATCTTaGCATCTTGTTATGCCAAGT | + |
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Preference number: 3 (lower is better) Translates to: TGGNTREKRPCALPTHDSTDLVS*HLVMPS Trigger: ACTTGGCATAACAAGATGCAAAGATACAAGGTCTGT...ACTGTCATGCGTGGGCAAGGCACAGGGCCTCTTCTCCCTAGTGTTGCCACCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGGTGGCAACACTAGGGAGAAGAGGCCCTGTGCCTTGCCCACGCATGACAGTTTCAGGATACAGACCTaGTATCTTTGCATCTTGTTA | + |
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Preference number: 3 (lower is better) Translates to: TGGNTREKRPCALPTHDSFRIQT*YLCILL Trigger: TAACAAGATGCAAAGATACAAGGTCTGTATCCTGAA...ACTGTCATGCGTGGGCAAGGCACAGGGCCTCTTCTCCCTAGTGTTGCCACCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR TCA 72 bp | AGCCTGATAGCTAACCCTGCCCCATCACTACCTGTATaGCTTGGGCTTCTAAGTGGAGCTAGCTTTAACAGC | + |
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Preference number: 3 (lower is better) Translates to: SLIANPAPSLPV*LGLLSGASFNS Trigger: GCTGTTAAAGCTAGCTCCACTTAGAAGCCCAAGTCATACAGGTAGTGATGGGGCAGGGTTAGCTATCAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR TCA 72 bp | ATGACAGTGAATCTGGCTCTGGTCGCTATTCTGTGGTaGGCCACTCATGAGGGCAATAGCTCAGAGAGAATT | + |
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Preference number: 3 (lower is better) Translates to: MTVNLALVAILW*ATHEGNSSERI Trigger: AATTCTCTCTGAGCTATTGCCCTCATGAGTGGCTCACCACAGAATAGCGACCAGAGCCAGATTCACTGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR CCA 72 bp | TATGCACATGTATGCCAGTCACATATGCAGCAGGCATaGGCATACATGGGTCTAACCAGATGGGGTCCTAAA | + |
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Preference number: 3 (lower is better) Translates to: YAHVCQSHMQQA*AYMGLTRWGPK Trigger: TTTAGGACCCCATCTGGTTAGACCCATGTATGCCCATGCCTGCTGCATATGTGACTGGCATACATGTGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR TCA 72 bp | GAGGCTGCAGCACTTGAGAGAATAGACCCTGTGCATTaGCTGAGCAGTACAATGGATATTACTCTGGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: EAAALERIDPVH*LSSTMDITLEF Trigger: GAACTCCAGAGTAATATCCATTGTACTGCTCAGTCAATGCACAGGGTCTATTCTCTCAAGTGCTGCAGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR TCA 72 bp | AGGTCTATTGCTGAAGACAAACCTATACTTCTCTACTaGACATGGAAATGCCAAGCTGGTGCCTACAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: RSIAEDKPILLY*TWKCQAGAYSV Trigger: CACACTGTAGGCACCAGCTTGGCATTTCCATGTTCAGTAGAGAAGTATAGGTTTGTCTTCAGCAATAGACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR GCA 72 bp | GAACCTAAATTGATCCACATAAATGTCCATGGCCTGTaGAGAACTGGACCTGTCTCTTATAAGCTGGGACAT | + |
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Preference number: 3 (lower is better) Translates to: EPKLIHINVHGL*RTGPVSYKLGH Trigger: ATGTCCCAGCTTATAAGAGACAGGTCCAGTTCTGCACAGGCCATGGACATTTATGTGGATCAATTTAGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR TCA 72 bp | TTGCATCTTGTTATGCCAAGTTCAGGTAACTTGATTTaGACACCAGGAAAAGGGGAGGGAGATTACGTGGTA | + |
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Preference number: 3 (lower is better) Translates to: LHLVMPSSGNLI*TPGKGEGDYVV Trigger: TACCACGTAATCTCCCTCCCCTTTTCCTGGTGTTCAAATCAAGTTACCTGAACTTGGCATAACAAGATGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR TCA 72 bp | TATCTTTGCATCTTGTTATGCCAAGTTCAGGTAACTTaGTTTGAACACCAGGAAAAGGGGAGGGAGATTACG | + |
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Preference number: 3 (lower is better) Translates to: YLCILLCQVQVT*FEHQEKGREIT Trigger: CGTAATCTCCCTCCCCTTTTCCTGGTGTTCAAATCAAGTTACCTGAACTTGGCATAACAAGATGCAAAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR TCA 72 bp | TGGTCTGTCAAATCCAGAGACCTTGAACCAGACCAATaGCTCACTGCAATGAACATTTATATAGGCAAACAC | + |
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Preference number: 3 (lower is better) Translates to: WSVKSRDLEPDQ*LTAMNIYIGKH Trigger: GTGTTTGCCTATATAAATGTTCATTGCAGTGAGTCATTGGTCTGGTTCAAGGTCTCTGGATTTGACAGACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR GCA 72 bp | TATACTTCTCTACTGAACATGGAAATGCCAAGCTGGTaGCTACAGTGTGCCTTAACTCCTATAAATAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: YTSLLNMEMPSW*LQCALTPINSV Trigger: CACACTATTTATAGGAGTTAAGGCACACTGTAGGCACCAGCTTGGCATTTCCATGTTCAGTAGAGAAGTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR CCA 72 bp | ACCTATACTTCTCTACTGAACATGGAAATGCCAAGCTaGTGCCTACAGTGTGCCTTAACTCCTATAAATAGT | + |
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Preference number: 3 (lower is better) Translates to: TYTSLLNMEMPS*CLQCALTPINS Trigger: ACTATTTATAGGAGTTAAGGCACACTGTAGGCACCAGCTTGGCATTTCCATGTTCAGTAGAGAAGTATAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGATGTAATATTGATTGGTCTGTCAAATCCAGAGACCTTGAACCAGACCAATATGGGAGAATTAGTGTaGAGGAAGAGAAGAAGTAGA | + |
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Preference number: 3 (lower is better) Translates to: VDVILIGLSNPETLNQTNMGELV*RKRRSR Trigger: TCTACTTCTTCTCTTCCTCAACACTAATTCTCCCAT...ATTGGTCTGGTTCAAGGTCTCTGGATTTGACAGACCAATCAATATTACATCCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR CCA 72 bp | TTTAAGTGCAATTATGTGTATATAGGAGCACATGGATaGGGGATGAGGTTAGAAGGACAAGTGAGTAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: FKCNYVYIGAHG*GMRLEGQVSRK Trigger: TTTCCTACTCACTTGTCCTTCTAACCTCATCCCCCATCCATGTGCTCCTATATACACATAATTGCACTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR CCA 72 bp | CTTAAGTTCCAGCTATACTGTCCTGGGACAATTACCTaGATATCACTTTACAATTCCACAGAGATAAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: LKFQLYCPGTIT*ISLYNSTEIKA Trigger: AGCCTTTATCTCTGTGGAATTGTAAAGTGATATCCAGGTAATTGTCCCAGGACAGTATAGCTGGAACTTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR TCA 72 bp | AGGTTAGAAGGACAAGTGAGTAGGAAAGTACTAGGGTaGGAAGAGGGAAGGGAAATAATAAGCAGTATATAT | + |
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Preference number: 3 (lower is better) Translates to: RLEGQVSRKVLG*EEGREIISSIY Trigger: ATATATACTGCTTATTATTTCCCTTCCCTCTTCTCACCCTAGTACTTTCCTACTCACTTGTCCTTCTAACCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR TCA 72 bp | GATTGCTCTCTAAACACTGACAGTAAGGTCTATTGCTaGAGACAAACCTATACTTCTCTACTGAACATGGAA | + |
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Preference number: 3 (lower is better) Translates to: DCSLNTDSKVYC*RQTYTSLLNME Trigger: TTCCATGTTCAGTAGAGAAGTATAGGTTTGTCTTCAGCAATAGACCTTACTGTCAGTGTTTAGAGAGCAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR TCA 72 bp | CTCACTGCAATGAACATTTATATAGGCAAACACATGTaGACAAAGGGATGTAGTGTGGGACAAACTATGACA | + |
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Preference number: 3 (lower is better) Translates to: LTAMNIYIGKHM*TKGCSVGQTMT Trigger: TGTCATAGTTTGTCCCACACTACATCCCTTTGTTCACATGTGTTTGCCTATATAAATGTTCATTGCAGTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR CAA 72 bp | ACAGGTGGCAACACTAGGGAGAAGAGGCCCTGTGCCTaGCCCACGCATGACAGTGAATCTGGCTCTGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: TGGNTREKRPCA*PTHDSESGSGR Trigger: GCGACCAGAGCCAGATTCACTGTCATGCGTGGGCAAGGCACAGGGCCTCTTCTCCCTAGTGTTGCCACCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR CAA 72 bp | ATGCTTTCCCTGTTCCCCATTTGCCACCAGTGGGAGTaGGGAGAGCAGCCTCACAGGGCATGGAAGCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: MLSLFPICHQWE*GEQPHRAWKPD Trigger: ATCAGGCTTCCATGCCCTGTGAGGCTGCTCTCCCAACTCCCACTGGTGGCAAATGGGGAACAGGGAAAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR CAA 72 bp | CCTGGATGTGAAGGTAATGCTTTCCCTGTTCCCCATTaGCCACCAGTGGGAGTTGGGAGAGCAGCCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: PGCEGNAFPVPH*PPVGVGRAASQ Trigger: CTGTGAGGCTGCTCTCCCAACTCCCACTGGTGGCAAATGGGGAACAGGGAAAGCATTACCTTCACATCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| CDS-3UTR TCA 90 bp | GAGTGGGTGAGTTGGGACCAAAATGGGAGAATTAGTGTTGAGGAAGAGAAGAAGTTCCTCTCTCTCCTTTaGCAGGAACCTTCAAGACAG | + |
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Preference number: 4 (lower is better) Translates to: EWVSWDQNGRISVEEEKKFLSLL*QEPSRQ Trigger: CTGTCTTGAAGGTTCCTGTCAAAGGAGAGAGAGGAA...CTTCTTCTCTTCCTCAACACTAATTCTCCCATTTTGGTCCCAACTCACCCACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| CDS-3UTR CCA 90 bp | ATAGGAGCACATGGATGGGGGATGAGGTTAGAAGGACAAGTGAGTAGGAAAGTAGGTGTATTCAGGGTCTaGTCAACTGTAGTAGCAATG | + |
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Preference number: 4 (lower is better) Translates to: IGAHGWGMRLEGQVSRKVGVFRV*STVVAM Trigger: CATTGCTACTACAGTTGACCAGACCCTGAATACACC...TACTTTCCTACTCACTTGTCCTTCTAACCTCATCCCCCATCCATGTGCTCCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| CDS-3UTR GCA 90 bp | ATAGGAGCACATGGATGGGGGATGAGGTTAGAAGGACAAGTGAGTAGGAAAGTACAAAAAGATCTGTCCTaGACACCCAGCCAAAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: IGAHGWGMRLEGQVSRKVQKDLS*TPSQRN Trigger: ATTTCTTTGGCTGGGTGTGCAGGACAGATCTTTTTG...TACTTTCCTACTCACTTGTCCTTCTAACCTCATCCCCCATCCATGTGCTCCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| CDS-3UTR TCA 90 bp | GAGTGGGTGAGTTGGGACCAAAATGGGAGAATTAGTGTTGAGGAAGAGAAGAAGAAAGAAATGCTCCTGTaGTCAGTGAGAGAGTTGATA | + |
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Preference number: 4 (lower is better) Translates to: EWVSWDQNGRISVEEEKKKEMLL*SVRELI Trigger: TATCAACTCTCTCACTGATCACAGGAGCATTTCTTT...CTTCTTCTCTTCCTCAACACTAATTCTCCCATTTTGGTCCCAACTCACCCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| CDS-3UTR TCA 90 bp | GAGTGGGTGAGTTGGGACCAAAATGGGAGAATTAGTGTTGAGGAAGAGAAGAAGGAGACTACATTAGAGTaGCAAAAGGATAGCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: EWVSWDQNGRISVEEEKKETTLE*QKDSWK Trigger: TTTCCAGCTATCCTTTTGTCACTCTAATGTAGTCTC...CTTCTTCTCTTCCTCAACACTAATTCTCCCATTTTGGTCCCAACTCACCCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR CAA 72 bp | AATGCTTTTCCTGTTTCCGGGTTGCATTTCCTAGCCTaGCTTTCAGGATACAGACCTTGTATCTTTGCATCT | + |
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Preference number: 4 (lower is better) Translates to: NAFPVSGLHFLA*LSGYRPCIFAS Trigger: AGATGCAAAGATACAAGGTCTGTATCCTGAAAGCAAGGCTAGGAAATGCAACCCGGAAACAGGAAAAGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR CAA 72 bp | TTTTGTTACTTGAGGAATGCTTTTCCTGTTTCCGGGTaGCATTTCCTAGCCTTGCTTTCAGGATACAGACCT | + |
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Preference number: 4 (lower is better) Translates to: FCYLRNAFPVSG*HFLALLSGYRP Trigger: AGGTCTGTATCCTGAAAGCAAGGCTAGGAAATGCAACCCGGAAACAGGAAAAGCATTCCTCAAGTAACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR CAA 72 bp | AATCAGAGTGGTGGTGACTCTATGTCCTTTTGTTACTaGAGGAATGCTTTTCCTGTTTCCGGGTTGCATTTC | + |
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Preference number: 4 (lower is better) Translates to: NQSGGDSMSFCY*RNAFPVSGLHF Trigger: GAAATGCAACCCGGAAACAGGAAAAGCATTCCTCAAGTAACAAAAGGACATAGAGTCACCACCACTCTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| 3UTR CAA 72 bp | CACAAAGTTTGTGGGAGTGACCGACCAATATCTGATTaGACTTTAGTTATAAGCCCTGAGACAGAAGCCATA | + |
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Preference number: 4 (lower is better) Translates to: HKVCGSDRPISD*TLVISPETEAI Trigger: TATGGCTTCTGTCTCAGGGCTTATAACTAAAGTCAAATCAGATATTGGTCGGTCACTCCCACAAACTTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| CDS-3UTR CCA 90 bp | GTGGATGTAATATTGATTGGTCTGTCAAATCCAGAGACCTTGAACCAGACCAATATAGCTGGAAAGTTTTaGAAGTGTGCACACTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: VDVILIGLSNPETLNQTNIAGKF*KCAHLQ Trigger: TTGCAAGTGTGCACACTTCCAAAACTTTCCAGCTAT...ATTGGTCTGGTTCAAGGTCTCTGGATTTGACAGACCAATCAATATTACATCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| CDS TCA 90 bp | ACCAAAAAGATCTGTCCTGCACACCCAGCCAAAGAAATGCTCCTGTaGTCAGTGAGAGAGTTGATACAAGCATTGGGCACAGTAACAGAT | + |
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Preference number: 5 (lower is better) Translates to: TKKICPAHPAKEMLL*SVRELIQALGTVTD Trigger: ATCTGTTACTGTGCCCAATGCTTGTATCAACTCTCTCACTGATCACAGGAGCATTTCTTTGGCTGGGTGTGCAGGACAGATCTTTTTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078447.2 ENSMUST00000215365.2 |
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| CDS-3UTR CAA 90 bp | GAGTGGGTGAGTTGGGACCAAAATGGGAGAATTAGTGTTGAGGAAGAGAAGAAGGATAGCTGGAAAGTTTaGGAAGTGTGCACACTTGCA | + |
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Preference number: 5 (lower is better) Translates to: EWVSWDQNGRISVEEEKKDSWKV*EVCTLA Trigger: TGCAAGTGTGCACACTTCCAAAACTTTCCAGCTATC...CTTCTTCTCTTCCTCAACACTAATTCTCCCATTTTGGTCCCAACTCACCCACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| CDS-3UTR CAA 90 bp | ATAGGAGCACATGGATGGGGGATGAGGTTAGAAGGACAAGTGAGTAGGAAAGTACATCTGAACACAGAATaGATGGTTCATAATCATAGC | + |
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Preference number: 5 (lower is better) Translates to: IGAHGWGMRLEGQVSRKVHLNTE*MVHNHS Trigger: GCTATGATTATGAACCATCAATTCTGTGTTCAGATG...TACTTTCCTACTCACTTGTCCTTCTAACCTCATCCCCCATCCATGTGCTCCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215365.2 |
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| CDS CAA 90 bp | CAGCTACCACTAAAAACAATGGCAGTCAGAAGAAGTAATAGTTTGTaGATAAAGGTGTCAGTGCAAGAAAGCCTCAGCAAAGAGGGGATA | + |
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Preference number: 6 (lower is better) Translates to: QLPLKTMAVRRSNSL*IKVSVQESLSKEGI Trigger: TATCCCCTCTTTGCTGAGGCTTTCTTGCACTGACACCTTTATCAACAAACTATTACTTCTTCTGACTGCCATTGTTTTTAGTGGTAGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078447.2 ENSMUST00000215365.2 |
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| CDS CAA 72 bp | CCACTAAAAACAATGGCAGTCAGAAGAAGTAATAGTTaGTTGATAAAGGTGTCAGTGCAAGAAAGCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: PLKTMAVRRSNS*LIKVSVQESLS Trigger: GCTGAGGCTTTCTTGCACTGACACCTTTATCAACAAACTATTACTTCTTCTGACTGCCATTGTTTTTAGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078447.2 ENSMUST00000215365.2 |
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| CDS CAA 72 bp | CTAAAAACAATGGCAGTCAGAAGAAGTAATAGTTTGTaGATAAAGGTGTCAGTGCAAGAAAGCCTCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: LKTMAVRRSNSL*IKVSVQESLSK Trigger: TTTGCTGAGGCTTTCTTGCACTGACACCTTTATCAACAAACTATTACTTCTTCTGACTGCCATTGTTTTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078447.2 ENSMUST00000215365.2 |
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