Pregenerated sensors for OLFR293 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063394Ensembl transcript IDs: ENSMUST00000081474.2, ENSMUST00000214401.3, ENSMUST00000215280.2
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGTTAGTTTCACTGTGTCTCTGTTTAGTTTCTGTTTTCATGCTCTaGCCATTGGTGAGAGTGGGTTGTTTAAGTTCCACACTATTACTG | + |
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Preference number: 1 (lower is better) Translates to: LLVSLCLCLVSVFML*PLVRVGCLSSTLLL Trigger: CAGTAATAGTGTGGAACTTAAACAACCCACTCTCACCAATGGGCAGAGCATGAAAACAGAAACTAAACAGAGACACAGTGAAACTAACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| 3UTR GCA 90 bp | TTCCTCCAAGGCAGTCTGGTTGAGCAAACAAATTACTCTAAAAGATaGATGCTAATCAGTAGATGGCAAGCCAAAAACAAACTTACAGAT | + |
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Preference number: 1 (lower is better) Translates to: FLQGSLVEQTNYSKR*MLISRWQAKNKLTD Trigger: ATCTGTAAGTTTGTTTTTGGCTTGCCATCTACTGATTAGCATGCATCTTTTAGAGTAATTTGTTTGCTCAACCAGACTGCCTTGGAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| 3UTR CAA 90 bp | GTTTCACTGTGTCTCTGTTTAGTTTCTGTTTTCATGCTCTGCCCATaGGTGAGAGTGGGTTGTTTAAGTTCCACACTATTACTGTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: VSLCLCLVSVFMLCP*VRVGCLSSTLLLCA Trigger: TGCACACAGTAATAGTGTGGAACTTAAACAACCCACTCTCACCAATGGGCAGAGCATGAAAACAGAAACTAAACAGAGACACAGTGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| 3UTR-3UTR TCA 90 bp | GCATATCTCCTGTCAAATCCTTTCCTCTGGATTCAGGGAGTCCTACGTAATAGGATGAGCTTCAGTGTTTaGGCAAGTAGGATTTATTCT | + |
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Preference number: 2 (lower is better) Translates to: AYLLSNPFLWIQGVLRNRMSFSV*ASRIYS Trigger: AGAATAAATCCTACTTGCTCAAACACTGAAGCTCAT...CCTATTACGTAGGACTCCCTGAATCCAGAGGAAAGGATTTGACAGGAGATATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| 3UTR-3UTR GCA 90 bp | ATCATCAGAAACTTCTTACTGGAACATATGGGAGCAAATACAGAACCCCACAGCGATTTATTCTATTCCTaGTGTGTGTGTCTGTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: IIRNFLLEHMGANTEPHSDLFYS*CVCLCA Trigger: GGCACACAGACACACACAGCAGGAATAGAATAAATC...GCTGTGGGGTTCTGTATTTGCTCCCATATGTTCCAGTAAGAAGTTTCTGATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| 3UTR-3UTR CCA 90 bp | GCATATCTCCTGTCAAATCCTTTCCTCTGGATTCAGGGAGTCCTACGTAATAGGAGCCAAAATGAGAAGTaGACACAAGCATCTATTTCT | + |
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Preference number: 2 (lower is better) Translates to: AYLLSNPFLWIQGVLRNRSQNEK*TQASIS Trigger: AGAAATAGATGCTTGTGTCCACTTCTCATTTTGGCT...CCTATTACGTAGGACTCCCTGAATCCAGAGGAAAGGATTTGACAGGAGATATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| 3UTR-3UTR CCA 90 bp | GCATATCTCCTGTCAAATCCTTTCCTCTGGATTCAGGGAGTCCTACGTAATAGGATGCTAATCAGTAGATaGCAAGCCAAAAACAAACTT | + |
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Preference number: 2 (lower is better) Translates to: AYLLSNPFLWIQGVLRNRMLISR*QAKNKL Trigger: AAGTTTGTTTTTGGCTTGCCATCTACTGATTAGCAT...CCTATTACGTAGGACTCCCTGAATCCAGAGGAAAGGATTTGACAGGAGATATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| 3UTR-3UTR TCA 90 bp | ATCATCAGAAACTTCTTACTGGAACATATGGGAGCAAATACAGAACCCCACAGCATGATATGCAAAAAGTaGGAGACCATGGAACTATCA | + |
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Preference number: 2 (lower is better) Translates to: IIRNFLLEHMGANTEPHSMICKK*ETMELS Trigger: TGATAGTTCCATGGTCTCTCACTTTTTGCATATCAT...GCTGTGGGGTTCTGTATTTGCTCCCATATGTTCCAGTAAGAAGTTTCTGATGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| 3UTR-3UTR CCA 90 bp | ATCATCAGAAACTTCTTACTGGAACATATGGGAGCAAATACAGAACCCCACAGCGTGAGTTACCATGCATaGTTCTATATATTTCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: IIRNFLLEHMGANTEPHSVSYHA*FYIFLN Trigger: GTTGAGAAATATATAGAACCATGCATGGTAACTCAC...GCTGTGGGGTTCTGTATTTGCTCCCATATGTTCCAGTAAGAAGTTTCTGATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTATCTCATTGAACACAGAAATGTTAAGCTGGTACTTGCAAAGTGTCATAAGTCTTACTGGAACATATaGGAGCAAATACAGAACCCC | + |
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Preference number: 2 (lower is better) Translates to: VYLIEHRNVKLVLAKCHKSYWNI*EQIQNP Trigger: GGGGTTCTGTATTTGCTCCCATATGTTCCAGTAAGA...CTTATGACACTTTGCAAGTACCAGCTTAACATTTCTGTGTTCAATGAGATACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTATCTCATTGAACACAGAAATGTTAAGCTGGTACTTGCAAAGTGTCATAAGTTTTATGAATGTGGGTaGCCTAGCATGTGTGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: VYLIEHRNVKLVLAKCHKFYECG*PSMCVY Trigger: ATACACACACATGCTAGGGCACCCACATTCATAAAA...CTTATGACACTTTGCAAGTACCAGCTTAACATTTCTGTGTTCAATGAGATACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTATCTCATTGAACACAGAAATGTTAAGCTGGTACTTGCAAAGTGTCATAAGATGAGCTTCAGTGTTTaGGCAAGTAGGATTTATTCT | + |
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Preference number: 2 (lower is better) Translates to: VYLIEHRNVKLVLAKCHKMSFSV*ASRIYS Trigger: AGAATAAATCCTACTTGCTCAAACACTGAAGCTCAT...CTTATGACACTTTGCAAGTACCAGCTTAACATTTCTGTGTTCAATGAGATACAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| 3UTR GCA 72 bp | TCACTGTGTCTCTGTTTAGTTTCTGTTTTCATGCTCTaGCCATTGGTGAGAGTGGGTTGTTTAAGTTCCACA | + |
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Preference number: 3 (lower is better) Translates to: SLCLCLVSVFML*PLVRVGCLSST Trigger: TGTGGAACTTAAACAACCCACTCTCACCAATGGGCAGAGCATGAAAACAGAAACTAAACAGAGACACAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| 3UTR-3UTR CAA 90 bp | ATCATCAGAAACTTCTTACTGGAACATATGGGAGCAAATACAGAACCCCACAGCATTGGTGAGAGTGGGTaGTTTAAGTTCCACACTATT | + |
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Preference number: 3 (lower is better) Translates to: IIRNFLLEHMGANTEPHSIGESG*FKFHTI Trigger: AATAGTGTGGAACTTAAACAACCCACTCTCACCAAT...GCTGTGGGGTTCTGTATTTGCTCCCATATGTTCCAGTAAGAAGTTTCTGATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAGTATAAGAGTAATTTCCTCCAAGGCAGTCTGGTTGAGCAAACAAATTACTTTCATGCTCTGCCCATaGGTGAGAGTGGGTTGTTTA | + |
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Preference number: 3 (lower is better) Translates to: SSIRVISSKAVWLSKQITFMLCP*VRVGCL Trigger: TAAACAACCCACTCTCACCAATGGGCAGAGCATGAA...AGTAATTTGTTTGCTCAACCAGACTGCCTTGGAGGAAATTACTCTTATACTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| 3UTR CCA 72 bp | CTTTCAAGTATAAGAGTAATTTCCTCCAAGGCAGTCTaGTTGAGCAAACAAATTACTCTAAAAGATGCATGC | + |
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Preference number: 3 (lower is better) Translates to: LSSIRVISSKAV*LSKQITLKDAC Trigger: GCATGCATCTTTTAGAGTAATTTGTTTGCTCAACCAGACTGCCTTGGAGGAAATTACTCTTATACTTGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR TCA 90 bp | ACTGTGTCTCTGTTTAGTTTCTGTTTTCATGCTCTGCCCATTGGTGAGAGTGGGTTCCTCTCTCTCCTTTaGCAGGAACCTTCAACACAG | + |
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Preference number: 4 (lower is better) Translates to: TVSLFSFCFHALPIGESGFLSLL*QEPSTQ Trigger: CTGTGTTGAAGGTTCCTGTCAAAGGAGAGAGAGGAA...CCCACTCTCACCAATGGGCAGAGCATGAAAACAGAAACTAAACAGAGACACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR CCA 90 bp | ACTGTGTCTCTGTTTAGTTTCTGTTTTCATGCTCTGCCCATTGGTGAGAGTGGGTGTGAGGGACACAAGTaGAAAAGGCTTTTCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TVSLFSFCFHALPIGESGCEGHK*KRLFLS Trigger: AGAGAGGAAAAGCCTTTTCCACTTGTGTCCCTCACA...CCCACTCTCACCAATGGGCAGAGCATGAAAACAGAAACTAAACAGAGACACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR TCA 90 bp | GGGTGCCCTAGCATGTGTGTGTATGTGTGTGTTTCTCAATCTATCTATTTCATGTTCCTCTCTCTCCTTTaGCAGGAACCTTCAACACAG | + |
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Preference number: 4 (lower is better) Translates to: GCPSMCVYVCVSQSIYFMFLSLL*QEPSTQ Trigger: CTGTGTTGAAGGTTCCTGTCAAAGGAGAGAGAGGAA...CATGAAATAGATAGATTGAGAAACACACACATACACACACATGCTAGGGCACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR TCA 90 bp | GGGTGCCCTAGCATGTGTGTGTATGTGTGTGTTTCTCAATCTATCTATTTCATGAAGCATTGGGCACAGTaGCAGAAATGTAGCACATGT | + |
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Preference number: 4 (lower is better) Translates to: GCPSMCVYVCVSQSIYFMKHWAQ*QKCSTC Trigger: ACATGTGCTACATTTCTGTCACTGTGCCCAATGCTT...CATGAAATAGATAGATTGAGAAACACACACATACACACACATGCTAGGGCACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR CCA 90 bp | ACTGTGTCTCTGTTTAGTTTCTGTTTTCATGCTCTGCCCATTGGTGAGAGTGGGACAGAAATGTTCCTGTaGTCAGTGAGAGAGTTGATA | + |
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Preference number: 4 (lower is better) Translates to: TVSLFSFCFHALPIGESGTEMFL*SVRELI Trigger: TATCAACTCTCTCACTGACCACAGGAACATTTCTGT...CCCACTCTCACCAATGGGCAGAGCATGAAAACAGAAACTAAACAGAGACACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR CCA 90 bp | ACTGTGTCTCTGTTTAGTTTCTGTTTTCATGCTCTGCCCATTGGTGAGAGTGGGACAGCTGGAAAGTTTTaGAAGTATGGACACTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: TVSLFSFCFHALPIGESGTAGKF*KYGHLQ Trigger: TTGCAAGTGTCCATACTTCCAAAACTTTCCAGCTGT...CCCACTCTCACCAATGGGCAGAGCATGAAAACAGAAACTAAACAGAGACACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR TCA 90 bp | TATGAATGTGGGTGCCCTAGCATGTGTGTGTATGTGTGTGTTTCTCAATCTATCGAAACCACAATAATGTaGGGGACACAAGTGGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: YECGCPSMCVYVCVSQSIETTIM*GTQVEK Trigger: CTTTTCCACTTGTGTCCCTCACATTATTGTGGTTTC...GATAGATTGAGAAACACACACATACACACACATGCTAGGGCACCCACATTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR TCA 90 bp | ATCATCAGAAACTTCTTACTGGAACATATGGGAGCAAATACAGAACCCCACAGCGAAACCACAATAATGTaGGGGACACAAGTGGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: IIRNFLLEHMGANTEPHSETTIM*GTQVEK Trigger: CTTTTCCACTTGTGTCCCTCACATTATTGTGGTTTC...GCTGTGGGGTTCTGTATTTGCTCCCATATGTTCCAGTAAGAAGTTTCTGATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR TCA 90 bp | ATCATCAGAAACTTCTTACTGGAACATATGGGAGCAAATACAGAACCCCACAGCGGAATTACTTTAGAGTaGCAAAAGGACAGCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: IIRNFLLEHMGANTEPHSGITLE*QKDSWK Trigger: TTTCCAGCTGTCCTTTTGTCACTCTAAAGTAATTCC...GCTGTGGGGTTCTGTATTTGCTCCCATATGTTCCAGTAAGAAGTTTCTGATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR CCA 90 bp | ATCATCAGAAACTTCTTACTGGAACATATGGGAGCAAATACAGAACCCCACAGCACAGCTGGAAAGTTTTaGAAGTATGGACACTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: IIRNFLLEHMGANTEPHSTAGKF*KYGHLQ Trigger: TTGCAAGTGTCCATACTTCCAAAACTTTCCAGCTGT...GCTGTGGGGTTCTGTATTTGCTCCCATATGTTCCAGTAAGAAGTTTCTGATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR TCA 90 bp | GTGTATCTCATTGAACACAGAAATGTTAAGCTGGTACTTGCAAAGTGTCATAAGAAGCATTGGGCACAGTaGCAGAAATGTAGCACATGT | + |
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Preference number: 4 (lower is better) Translates to: VYLIEHRNVKLVLAKCHKKHWAQ*QKCSTC Trigger: ACATGTGCTACATTTCTGTCACTGTGCCCAATGCTT...CTTATGACACTTTGCAAGTACCAGCTTAACATTTCTGTGTTCAATGAGATACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| 3UTR CAA 72 bp | TGTCTCTGTTTAGTTTCTGTTTTCATGCTCTGCCCATaGGTGAGAGTGGGTTGTTTAAGTTCCACACTATTA | + |
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Preference number: 4 (lower is better) Translates to: CLCLVSVFMLCP*VRVGCLSSTLL Trigger: TAATAGTGTGGAACTTAAACAACCCACTCTCACCAATGGGCAGAGCATGAAAACAGAAACTAAACAGAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR GCA 90 bp | TCAAGTATAAGAGTAATTTCCTCCAAGGCAGTCTGGTTGAGCAAACAAATTACTGGAAGTATGGACACTTaGAAGGATAAGAGAGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: SSIRVISSKAVWLSKQITGSMDT*KDKRGK Trigger: CTTACCTCTCTTATCCTTGCAAGTGTCCATACTTCC...AGTAATTTGTTTGCTCAACCAGACTGCCTTGGAGGAAATTACTCTTATACTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR CCA 90 bp | GTGTATCTCATTGAACACAGAAATGTTAAGCTGGTACTTGCAAAGTGTCATAAGACAGAAATGTTCCTGTaGTCAGTGAGAGAGTTGATA | + |
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Preference number: 4 (lower is better) Translates to: VYLIEHRNVKLVLAKCHKTEMFL*SVRELI Trigger: TATCAACTCTCTCACTGACCACAGGAACATTTCTGT...CTTATGACACTTTGCAAGTACCAGCTTAACATTTCTGTGTTCAATGAGATACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS CCA 90 bp | ACCAAAAAGACCTGTGCTACACATCCAGCCACAGAAATGTTCCTGTaGTCAGTGAGAGAGTTGATACAAGCATTGGGCACAGTGACAGAA | + |
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Preference number: 5 (lower is better) Translates to: TKKTCATHPATEMFL*SVRELIQALGTVTE Trigger: TTCTGTCACTGTGCCCAATGCTTGTATCAACTCTCTCACTGACCACAGGAACATTTCTGTGGCTGGATGTGTAGCACAGGTCTTTTTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000081474.2 ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR CAA 90 bp | GCATATCTCCTGTCAAATCCTTTCCTCTGGATTCAGGGAGTCCTACGTAATAGGTTTCCTCTCTCTCCTTaGACAGGAACCTTCAACACA | + |
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Preference number: 5 (lower is better) Translates to: AYLLSNPFLWIQGVLRNRFPLSP*TGTFNT Trigger: TGTGTTGAAGGTTCCTGTCAAAGGAGAGAGAGGAAA...CCTATTACGTAGGACTCCCTGAATCCAGAGGAAAGGATTTGACAGGAGATATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR CAA 90 bp | ATCATCAGAAACTTCTTACTGGAACATATGGGAGCAAATACAGAACCCCACAGCGAGTTGATACAAGCATaGGGCACAGTGACAGAAATG | + |
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Preference number: 5 (lower is better) Translates to: IIRNFLLEHMGANTEPHSELIQA*GTVTEM Trigger: CATTTCTGTCACTGTGCCCAATGCTTGTATCAACTC...GCTGTGGGGTTCTGTATTTGCTCCCATATGTTCCAGTAAGAAGTTTCTGATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR CAA 90 bp | ACTGTGTCTCTGTTTAGTTTCTGTTTTCATGCTCTGCCCATTGGTGAGAGTGGGCATCTGAATGCAGTATaGATGGTTCATAATCATAGG | + |
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Preference number: 5 (lower is better) Translates to: TVSLFSFCFHALPIGESGHLNAV*MVHNHR Trigger: CCTATGATTATGAACCATCAATACTGCATTCAGATG...CCCACTCTCACCAATGGGCAGAGCATGAAAACAGAAACTAAACAGAGACACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR CAA 90 bp | TATGAATGTGGGTGCCCTAGCATGTGTGTGTATGTGTGTGTTTCTCAATCTATCAGAAGTAAGAGTTTGTaGTTAAAGGTGTCAGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: YECGCPSMCVYVCVSQSIRSKSL*LKVSEQ Trigger: TTGCTCTGACACCTTTAACAACAAACTCTTACTTCT...GATAGATTGAGAAACACACACATACACACACATGCTAGGGCACCCACATTCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR CAA 90 bp | GGGTGCCCTAGCATGTGTGTGTATGTGTGTGTTTCTCAATCTATCTATTTCATGAGAAGTAAGAGTTTGTaGTTAAAGGTGTCAGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: GCPSMCVYVCVSQSIYFMRSKSL*LKVSEQ Trigger: TTGCTCTGACACCTTTAACAACAAACTCTTACTTCT...CATGAAATAGATAGATTGAGAAACACACACATACACACACATGCTAGGGCACCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS-3UTR CAA 90 bp | TCAAGTATAAGAGTAATTTCCTCCAAGGCAGTCTGGTTGAGCAAACAAATTACTCATCTGAATGCAGTATaGATGGTTCATAATCATAGG | + |
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Preference number: 5 (lower is better) Translates to: SSIRVISSKAVWLSKQITHLNAV*MVHNHR Trigger: CCTATGATTATGAACCATCAATACTGCATTCAGATG...AGTAATTTGTTTGCTCAACCAGACTGCCTTGGAGGAAATTACTCTTATACTTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS TCA 72 bp | GGACACAAGTGGAAAAGGCTTTTCCTCTCTCTCCTTTaGCAGGAACCTTCAACACAGCTGATAATATGCGAG | + |
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Preference number: 6 (lower is better) Translates to: GHKWKRLFLSLL*QEPSTQLIICE Trigger: CTCGCATATTATCAGCTGTGTTGAAGGTTCCTGTCAAAGGAGAGAGAGGAAAAGCCTTTTCCACTTGTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081474.2 ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS CAA 72 bp | GGGACACAAGTGGAAAAGGCTTTTCCTCTCTCTCCTTaGACAGGAACCTTCAACACAGCTGATAATATGCGA | + |
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Preference number: 6 (lower is better) Translates to: GTQVEKAFPLSP*TGTFNTADNMR Trigger: TCGCATATTATCAGCTGTGTTGAAGGTTCCTGTCAAAGGAGAGAGAGGAAAAGCCTTTTCCACTTGTGTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081474.2 ENSMUST00000214401.3 ENSMUST00000215280.2 |
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| CDS CAA 72 bp | CTGAGACCAATGGCAGTCAGAAGAAGTAAGAGTTTGTaGTTAAAGGTGTCAGAGCAAGAAAGCCTCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: LRPMAVRRSKSL*LKVSEQESLSK Trigger: TTTGCTGAGGCTTTCTTGCTCTGACACCTTTAACAACAAACTCTTACTTCTTCTGACTGCCATTGGTCTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081474.2 ENSMUST00000214401.3 ENSMUST00000215280.2 |
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