Pregenerated sensors for OLFR291 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070460Ensembl transcript IDs: ENSMUST00000211582.2, ENSMUST00000217039.3
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTGAGCAGAGACTGAAGGAAAGGACACCCAGAGACTGTCCTACCTaGAGATTCATCCCATATACAGTTACCAAACTCAGACACCATTGT | + |
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Preference number: 1 (lower is better) Translates to: VEQRLKERTPRDCPT*RFIPYTVTKLRHHC Trigger: ACAATGGTGTCTGAGTTTGGTAACTGTATATGGGATGAATCTCCAGGTAGGACAGTCTCTGGGTGTCCTTTCCTTCAGTCTCTGCTCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR CCA 90 bp | CCTTACAAATACAGAGACAGATATTGGCAGCCAACCATTGGAGAGTaGGGTCCCAAAGAGGAGTTAGAGAAAGAACTGAAGGAGTTGAAG | + |
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Preference number: 1 (lower is better) Translates to: PYKYRDRYWQPTIGE*GPKEELEKELKELK Trigger: CTTCAACTCCTTCAGTTCTTTCTCTAACTCCTCTTTGGGACCCCACTCTCCAATGGTTGGCTGCCAATATCTGTCTCTGTATTTGTAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR CCA 90 bp | CACAACATTCAACCTATCCACATAGGTATATATACCTACACACTGTaGGAAATGCATCCTGTTCAGAGGTCAATATGCCCACCTGACTTC | + |
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Preference number: 1 (lower is better) Translates to: HNIQPIHIGIYTYTL*EMHPVQRSICPPDF Trigger: GAAGTCAGGTGGGCATATTGACCTCTGAACAGGATGCATTTCCCACAGTGTGTAGGTATATATACCTATGTGGATAGGTTGAATGTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR TCA 90 bp | TCCCAAAGAGGAGTTAGAGAAAGAACTGAAGGAGTTGAAGAGATTTaGAATCCCACAAGAAGAACAACAATATTAACCAACCAGACCTCC | + |
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Preference number: 1 (lower is better) Translates to: SQRGVRERTEGVEEI*NPTRRTTILTNQTS Trigger: GGAGGTCTGGTTGGTTAATATTGTTGTTCTTCTTGTGGGATTTCAAATCTCTTCAACTCCTTCAGTTCTTTCTCTAACTCCTCTTTGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR-3UTR CCA 90 bp | TACACTGCAGAGGATGACCTTGTCATGCATCAATGGAAGGAGAGGTTCTTGGTCGTGGGAGTGGGTAGGTaGGTGGGTGGAGTAACATCC | + |
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Preference number: 2 (lower is better) Translates to: YTAEDDLVMHQWKERFLVVGVGR*VGGVTS Trigger: GGATGTTACTCCACCCACCCACCTACCCACTCCCAC...GACCAAGAACCTCTCCTTCCATTGATGCATGACAAGGTCATCCTCTGCAGTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR-3UTR GCA 90 bp | TACACTGCAGAGGATGACCTTGTCATGCATCAATGGAAGGAGAGGTTCTTGGTCCCTGGGAATGCTAGATaGCCCAGTGTAGGGGAATCA | + |
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Preference number: 2 (lower is better) Translates to: YTAEDDLVMHQWKERFLVPGNAR*PSVGES Trigger: TGATTCCCCTACACTGGGGCATCTAGCATTCCCAGG...GACCAAGAACCTCTCCTTCCATTGATGCATGACAAGGTCATCCTCTGCAGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGTACCACAAATAATCTCTAGGCTTCTAGTAAGGCATGCTTTACCTTTTCCCGTGTTGAGCAGAGACTaGAGGAAAGGACACCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: PVPQIISRLLVRHALPFPVLSRD*RKGHPE Trigger: CTCTGGGTGTCCTTTCCTTCAGTCTCTGCTCAACAC...GGGAAAAGGTAAAGCATGCCTTACTAGAAGCCTAGAGATTATTTGTGGTACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR-3UTR CCA 90 bp | GAGACCCTGCCAAAGCCTTACAAATACAGAGACAGATATTGGCAGCCAACCATTGTGATAGGTTGTTTCTaGGAGGGAAGGAAACTGGGA | + |
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Preference number: 2 (lower is better) Translates to: ETLPKPYKYRDRYWQPTIVIGCF*EGRKLG Trigger: TCCCAGTTTCCTTCCCTCCCAGAAACAACCTATCAC...AATGGTTGGCTGCCAATATCTGTCTCTGTATTTGTAAGGCTTTGGCAGGGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGTACCACAAATAATCTCTAGGCTTCTAGTAAGGCATGCTTTACCTTTTCCCCCAACCATTGGAGAGTaGGGTCCCAAAGAGGAGTTA | + |
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Preference number: 2 (lower is better) Translates to: PVPQIISRLLVRHALPFPPTIGE*GPKEEL Trigger: TAACTCCTCTTTGGGACCCCACTCTCCAATGGTTGG...GGGAAAAGGTAAAGCATGCCTTACTAGAAGCCTAGAGATTATTTGTGGTACAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR-3UTR TCA 90 bp | AAGGCATGCTTTACCTTTTCCCAACAAAAAGGCCATTTAACACAACATTCAACCATGCTGAAAGGAGTCTaGTTTGGCTGTCTCCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: KACFTFSQQKGHLTQHSTMLKGV*FGCLLR Trigger: TCTCAGGAGACAGCCAAATCAGACTCCTTTCAGCAT...GGTTGAATGTTGTGTTAAATGGCCTTTTTGTTGGGAAAAGGTAAAGCATGCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGTACCACAAATAATCTCTAGGCTTCTAGTAAGGCATGCTTTACCTTTTCCCGCAAATATAAAGTGTTaGGCAGAGACTGAAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: PVPQIISRLLVRHALPFPANIKC*AETEGK Trigger: CTTTCCTTCAGTCTCTGCTCAACACTTTATATTTGC...GGGAAAAGGTAAAGCATGCCTTACTAGAAGCCTAGAGATTATTTGTGGTACAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR-3UTR CCA 90 bp | AAGGCATGCTTTACCTTTTCCCAACAAAAAGGCCATTTAACACAACATTCAACCTATACCTACACACTGTaGGAAATGCATCCTGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: KACFTFSQQKGHLTQHSTYTYTL*EMHPVQ Trigger: CTGAACAGGATGCATTTCCCACAGTGTGTAGGTATA...GGTTGAATGTTGTGTTAAATGGCCTTTTTGTTGGGAAAAGGTAAAGCATGCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR GCA 72 bp | ATGGAAGGAGAGGCCCTTGGTCCTGGGAATGCTAGATaGCCCAGTGTAGGGGAATCAAGGGTGGGGAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: MEGEALGPGNAR*PSVGESRVGRQ Trigger: TTGCCTCCCCACCCTTGATTCCCCTACACTGGGGCATCTAGCATTCCCAGGACCAAGGGCCTCTCCTTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR TCA 72 bp | AGTACACATGACCCCGGGTGCATACACTGCAGAGGATaGCCTTGTCATGCATCAATGGAAGGAGAGGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: STHDPGCIHCRG*PCHASMEGEVL Trigger: AAGAACCTCTCCTTCCATTGATGCATGACAAGGTCATCCTCTGCAGTGTATGCACCCGGGGTCATGTGTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR TCA 72 bp | GTCATGCATCAATGGAAGGAGAGGTTCTTGGTCCAATaGAGGCTCGATAGATGCCCCAGTGTAGGGAAATCA | + |
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Preference number: 3 (lower is better) Translates to: VMHQWKERFLVQ*RLDRCPSVGKS Trigger: TGATTTCCCTACACTGGGGCATCTATCGAGCCTTCATTGGACCAAGAACCTCTCCTTCCATTGATGCATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR CCA 72 bp | TACAGAGACAGATATTGGCAGCCAACCATTGGAGAGTaGGGTCCCAAAGAGGAGTTAGAGAAAGAACTGAAG | + |
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Preference number: 3 (lower is better) Translates to: YRDRYWQPTIGE*GPKEELEKELK Trigger: CTTCAGTTCTTTCTCTAACTCCTCTTTGGGACCCCACTCTCCAATGGTTGGCTGCCAATATCTGTCTCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR-3UTR CAA 90 bp | CCTGTACCACAAATAATCTCTAGGCTTCTAGTAAGGCATGCTTTACCTTTTCCCACATATAGGCCCAGCTaGCCCATGAATCTGCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: PVPQIISRLLVRHALPFPTYRPS*PMNLLF Trigger: GAAGAGCAGATTCATGGGCAAGCTGGGCCTATATGT...GGGAAAAGGTAAAGCATGCCTTACTAGAAGCCTAGAGATTATTTGTGGTACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR CCA 72 bp | AGACTGAAGGAAAGGACACCCAGAGACTGTCCTACCTaGAGATTCATCCCATATACAGTTACCAAACTCAGA | + |
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Preference number: 3 (lower is better) Translates to: RLKERTPRDCPT*RFIPYTVTKLR Trigger: TCTGAGTTTGGTAACTGTATATGGGATGAATCTCCAGGTAGGACAGTCTCTGGGTGTCCTTTCCTTCAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR-3UTR CAA 90 bp | GGAGAGTGGGGTCCCAAAGAGGAGTTAGAGAAAGAACTGAAGGAGTTGAAGAGACAAGATCCATCTGTCTaGGATCTACAAGGAATACAT | + |
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Preference number: 3 (lower is better) Translates to: GEWGPKEELEKELKELKRQDPSV*DLQGIH Trigger: ATGTATTCCTTGTAGATCCAAGACAGATGGATCTTG...TCTCTTCAACTCCTTCAGTTCTTTCTCTAACTCCTCTTTGGGACCCCACTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR-3UTR CAA 90 bp | GGAGAGTGGGGTCCCAAAGAGGAGTTAGAGAAAGAACTGAAGGAGTTGAAGAGAAAGAGAATGACCTTGTaGGACATAAATGGAAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: GEWGPKEELEKELKELKRKRMTL*DINGRR Trigger: TCTCCTTCCATTTATGTCCAACAAGGTCATTCTCTT...TCTCTTCAACTCCTTCAGTTCTTTCTCTAACTCCTCTTTGGGACCCCACTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR-3UTR CAA 90 bp | CAAGTCAGGAACCCAGAGTTAGGAAATGAAGCAGAAACTGTAGATAAATGCTACGGAGGATGTGATAGGTaGTTTCTGGGAGGGAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: QVRNPELGNEAETVDKCYGGCDR*FLGGKE Trigger: TTCCTTCCCTCCCAGAAACAACCTATCACATCCTCC...GTAGCATTTATCTACAGTTTCTGCTTCATTTCCTAACTCTGGGTTCCTGACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR GCA 72 bp | CCATATACAGTTACCAAACTCAGACACCATTGTGGATaGCAAGGAGTGTATGCTGAAAGGAGTCTGATTTGG | + |
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Preference number: 3 (lower is better) Translates to: PYTVTKLRHHCG*QGVYAERSLIW Trigger: CCAAATCAGACTCCTTTCAGCATACACTCCTTGGCATCCACAATGGTGTCTGAGTTTGGTAACTGTATATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR-3UTR CAA 90 bp | GCAGAAACTGTAGATAAATGCTACCTATTGATTTATTCCTCATGGCTTTCTTGTTGGAAGGAGAGGCCCTaGGTCCTGGGAATGCTAGAT | + |
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Preference number: 3 (lower is better) Translates to: AETVDKCYLLIYSSWLSCWKERP*VLGMLD Trigger: ATCTAGCATTCCCAGGACCAAGGGCCTCTCCTTCCA...ACAAGAAAGCCATGAGGAATAAATCAATAGGTAGCATTTATCTACAGTTTCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR-3UTR CAA 90 bp | CAAGTCAGGAACCCAGAGTTAGGAAATGAAGCAGAAACTGTAGATAAATGCTACCAAACTCAGACACCATaGTGGATGCCAAGGAGTGTA | + |
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Preference number: 3 (lower is better) Translates to: QVRNPELGNEAETVDKCYQTQTP*WMPRSV Trigger: TACACTCCTTGGCATCCACAATGGTGTCTGAGTTTG...GTAGCATTTATCTACAGTTTCTGCTTCATTTCCTAACTCTGGGTTCCTGACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR CCA 72 bp | CAACCTATCCACATAGGTATATATACCTACACACTGTaGGAAATGCATCCTGTTCAGAGGTCAATATGCCCA | + |
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Preference number: 3 (lower is better) Translates to: QPIHIGIYTYTL*EMHPVQRSICP Trigger: TGGGCATATTGACCTCTGAACAGGATGCATTTCCCACAGTGTGTAGGTATATATACCTATGTGGATAGGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR TCA 72 bp | CAAACATTAATTAATAAAACATCTGGTGAGTCTTCCTaGAACTCTATCCAAGGCATCTCCCCAACCTATGAG | + |
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Preference number: 3 (lower is better) Translates to: QTLINKTSGESS*NSIQGISPTYE Trigger: CTCATAGGTTGGGGAGATGCCTTGGATAGAGTTTCAGGAAGACTCACCAGATGTTTTATTAATTAATGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| 3UTR CAA 72 bp | GACCCTGCCAAAGCCTTACAAATACAGAGACAGATATaGGCAGCCAACCATTGGAGAGTGGGGTCCCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: DPAKALQIQRQI*AANHWRVGSQR Trigger: TCTTTGGGACCCCACTCTCCAATGGTTGGCTGCCAATATCTGTCTCTGTATTTGTAAGGCTTTGGCAGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| CDS-3UTR TCA 90 bp | TACACTGCAGAGGATGACCTTGTCATGCATCAATGGAAGGAGAGGTTCTTGGTCTGTAGGAGATCAAAGTaGTCAGAAAAGCACCAACCC | + |
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Preference number: 4 (lower is better) Translates to: YTAEDDLVMHQWKERFLVCRRSK*SEKHQP Trigger: GGGTTGGTGCTTTTCTGATCACTTTGATCTCCTACA...GACCAAGAACCTCTCCTTCCATTGATGCATGACAAGGTCATCCTCTGCAGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| CDS-3UTR TCA 90 bp | AAGGCATGCTTTACCTTTTCCCAACAAAAAGGCCATTTAACACAACATTCAACCCTTCCAGGAGAGTGTTaGCTGGAGGTTGGGCGCATA | + |
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Preference number: 4 (lower is better) Translates to: KACFTFSQQKGHLTQHSTLPGEC*LEVGRI Trigger: TATGCGCCCAACCTCCAGTCAACACTCTCCTGGAAG...GGTTGAATGTTGTGTTAAATGGCCTTTTTGTTGGGAAAAGGTAAAGCATGCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| CDS-3UTR CCA 90 bp | ATATATACCTACACACTGTGGGAAATGCATCCTGTTCAGAGGTCAATATGCCCACAGGGCCACCACAGGTaGAATATCACAATAATACTG | + |
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Preference number: 4 (lower is better) Translates to: IYTYTLWEMHPVQRSICPQGHHR*NITIIL Trigger: CAGTATTATTGTGATATTCCACCTGTGGTGGCCCTG...TGGGCATATTGACCTCTGAACAGGATGCATTTCCCACAGTGTGTAGGTATATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| CDS-3UTR CCA 90 bp | GGAGAGTGGGGTCCCAAAGAGGAGTTAGAGAAAGAACTGAAGGAGTTGAAGAGACCAACAAGTAATACATaGGAGTTTGAAGCTTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: GEWGPKEELEKELKELKRPTSNT*EFEAFS Trigger: AGAAAAAGCTTCAAACTCCCATGTATTACTTGTTGG...TCTCTTCAACTCCTTCAGTTCTTTCTCTAACTCCTCTTTGGGACCCCACTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| CDS GCA 90 bp | GCTAAAGGTGGACATTGTGTGGACAAAAGAGTTCAGAAACCCAGCTaGCCAAGTCCCAAACAACAGCTGCACACAGCGAACCTTGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: AKGGHCVDKRVQKPS*PSPKQQLHTANLGH Trigger: ATGACCAAGGTTCGCTGTGTGCAGCTGTTGTTTGGGACTTGGGCAGCTGGGTTTCTGAACTCTTTTGTCCACACAATGTCCACCTTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211582.2 ENSMUST00000217039.3 |
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| CDS-3UTR CAA 90 bp | ATATATACCTACACACTGTGGGAAATGCATCCTGTTCAGAGGTCAATATGCCCACATGTGGAGAAAGCTTaGCGCTTTCCTTCTGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: IYTYTLWEMHPVQRSICPHVEKA*RFPSAD Trigger: GTCAGCAGAAGGAAAGCGCAAAGCTTTCTCCACATG...TGGGCATATTGACCTCTGAACAGGATGCATTTCCCACAGTGTGTAGGTATATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| CDS CCA 90 bp | ACTCTATTAGACTTGCAGAAAGAAAGGCTAAAGGTGGACATTGTGTaGACAAAAGAGTTCAGAAACCCAGCTGCCCAAGTCCCAAACAAC | + |
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Preference number: 5 (lower is better) Translates to: TLLDLQKERLKVDIV*TKEFRNPAAQVPNN Trigger: GTTGTTTGGGACTTGGGCAGCTGGGTTTCTGAACTCTTTTGTCCACACAATGTCCACCTTTAGCCTTTCTTTCTGCAAGTCTAATAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211582.2 ENSMUST00000217039.3 |
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| CDS CCA 90 bp | CATAGAGATGAGTCTGTCTCTTCCAGGAGAGTGTTGACTGGAGGTTaGGCGCATATAGGTAAATATAGTTGTACCATAGAACAAGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: HRDESVSSRRVLTGG*AHIGKYSCTIEQED Trigger: GTCTTCTTGTTCTATGGTACAACTATATTTACCTATATGCGCCCAACCTCCAGTCAACACTCTCCTGGAAGAGACAGACTCATCTCTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211582.2 ENSMUST00000217039.3 |
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| CDS-3UTR CAA 90 bp | GAGACCCTGCCAAAGCCTTACAAATACAGAGACAGATATTGGCAGCCAACCATTCAACCCCAAAGATACTaGCTATCACTAAAAGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: ETLPKPYKYRDRYWQPTIQPQRY*LSLKEA Trigger: TGCTTCTTTTAGTGATAGCAAGTATCTTTGGGGTTG...AATGGTTGGCTGCCAATATCTGTCTCTGTATTTGTAAGGCTTTGGCAGGGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| CDS-3UTR CAA 90 bp | AAGACACAGATCAATTGCATGAATCAAGAAACAAGATCCATCTGTCTTGGATCTAGATTCTTGAGCATCTaGGGGACAGTAGCTGATGGG | + |
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Preference number: 5 (lower is better) Translates to: KTQINCMNQETRSICLGSRFLSI*GTVADG Trigger: CCCATCAGCTACTGTCCCCAAGATGCTCAAGAATCT...AGATCCAAGACAGATGGATCTTGTTTCTTGATTCATGCAATTGATCTGTGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| CDS-3UTR CAA 90 bp | AAGGCATGCTTTACCTTTTCCCAACAAAAAGGCCATTTAACACAACATTCAACCGTAATACATGGGAGTTaGAAGCTTTTTCTCAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: KACFTFSQQKGHLTQHSTVIHGS*KLFLSH Trigger: GTGACTGAGAAAAAGCTTCAAACTCCCATGTATTAC...GGTTGAATGTTGTGTTAAATGGCCTTTTTGTTGGGAAAAGGTAAAGCATGCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000217039.3 |
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| CDS GCA 72 bp | GGACATTGTGTGGACAAAAGAGTTCAGAAACCCAGCTaGCCAAGTCCCAAACAACAGCTGCACACAGCGAAC | + |
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Preference number: 6 (lower is better) Translates to: GHCVDKRVQKPS*PSPKQQLHTAN Trigger: GTTCGCTGTGTGCAGCTGTTGTTTGGGACTTGGGCAGCTGGGTTTCTGAACTCTTTTGTCCACACAATGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211582.2 ENSMUST00000217039.3 |
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| CDS CCA 72 bp | AGTGATCTGATAGATGATGACAAAGGCCACAAAGAGTaGATAGCGCACTTCAGGGAGGTCAGAGAGCCCTAT | + |
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Preference number: 6 (lower is better) Translates to: SDLIDDDKGHKE*IAHFREVREPY Trigger: ATAGGGCTCTCTGACCTCCCTGAAGTGCGCTATCCACTCTTTGTGGCCTTTGTCATCATCTATCAGATCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211582.2 ENSMUST00000217039.3 |
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| CDS CCA 72 bp | GACTTGCAGAAAGAAAGGCTAAAGGTGGACATTGTGTaGACAAAAGAGTTCAGAAACCCAGCTGCCCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: DLQKERLKVDIV*TKEFRNPAAQV Trigger: GACTTGGGCAGCTGGGTTTCTGAACTCTTTTGTCCACACAATGTCCACCTTTAGCCTTTCTTTCTGCAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211582.2 ENSMUST00000217039.3 |
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| CDS CAA 90 bp | GACCCCATACAACATAGAGATGAGTCTGTCTCTTCCAGGAGAGTGTaGACTGGAGGTTGGGCGCATATAGGTAAATATAGTTGTACCATA | + |
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Preference number: 6 (lower is better) Translates to: DPIQHRDESVSSRRV*TGGWAHIGKYSCTI Trigger: TATGGTACAACTATATTTACCTATATGCGCCCAACCTCCAGTCAACACTCTCCTGGAAGAGACAGACTCATCTCTATGTTGTATGGGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211582.2 ENSMUST00000217039.3 |
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| CDS CCA 72 bp | GAGTCTGTCTCTTCCAGGAGAGTGTTGACTGGAGGTTaGGCGCATATAGGTAAATATAGTTGTACCATAGAA | + |
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Preference number: 6 (lower is better) Translates to: ESVSSRRVLTGG*AHIGKYSCTIE Trigger: TTCTATGGTACAACTATATTTACCTATATGCGCCCAACCTCCAGTCAACACTCTCCTGGAAGAGACAGACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211582.2 ENSMUST00000217039.3 |
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| CDS CAA 72 bp | CAACATAGAGATGAGTCTGTCTCTTCCAGGAGAGTGTaGACTGGAGGTTGGGCGCATATAGGTAAATATAGT | + |
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Preference number: 6 (lower is better) Translates to: QHRDESVSSRRV*TGGWAHIGKYS Trigger: ACTATATTTACCTATATGCGCCCAACCTCCAGTCAACACTCTCCTGGAAGAGACAGACTCATCTCTATGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211582.2 ENSMUST00000217039.3 |
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