Pregenerated sensors for OLFR287 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090129Ensembl transcript IDs: ENSMUST00000170618.8
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCATGACAGGAAGCATGGCAGTGTGCAGGCACATCTGGAGGACCTaGGAGTTCTACATCTTGATCCGAAGGCAGTCAGGAGGAGTAGAC | + |
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Preference number: 1 (lower is better) Translates to: TMTGSMAVCRHIWRT*EFYILIRRQSGGVD Trigger: GTCTACTCCTCCTGACTGCCTTCGGATCAAGATGTAGAACTCTCAGGTCCTCCAGATGTGCCTGCACACTGCCATGCTTCCTGTCATGGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGCAGTCAGGAGGAGTAGACAACCAGGAGGGGACTCTCTTCCACACTGGGCAAGCCTGCCCACACAGTaGCACACACTTCCTTCAACA | + |
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Preference number: 2 (lower is better) Translates to: KAVRRSRQPGGDSLPHWASLPTQ*HTLPST Trigger: TGTTGAAGGAAGTGTGTGTCACTGTGTGGGCAGGCT...TGCCCAGTGTGGAAGAGAGTCCCCTCCTGGTTGTCTACTCCTCCTGACTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTCAGGAGGAGTAGACAACCAGGAGGGGACTCTCTTCCACACTGGGCAGAGCATGAATACTCATTCCTaGACTCTGGTGGAAATGGTG | + |
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Preference number: 2 (lower is better) Translates to: QSGGVDNQEGTLFHTGQSMNTHS*TLVEMV Trigger: CACCATTTCCACCAGAGTCCAGGAATGAGTATTCAT...GCTCTGCCCAGTGTGGAAGAGAGTCCCCTCCTGGTTGTCTACTCCTCCTGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| 3UTR-3UTR TCA 90 bp | AATGAATACTCATTCCTGGACTCTGGTGGAAATGGTGAAGCCAGGAAGGAGTTACTCTTCACTGTGCAGTaGAGGGAACTTTTTCCTTAT | + |
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Preference number: 2 (lower is better) Translates to: NEYSFLDSGGNGEARKELLFTVQ*RELFPY Trigger: ATAAGGAAAAAGTTCCCTTCACTGCACAGTGAAGAG...TAACTCCTTCCTGGCTTCACCATTTCCACCAGAGTCCAGGAATGAGTATTCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| 3UTR TCA 72 bp | GGAAGCATGGCAGTGTGCAGGCACATCTGGAGGACCTaGGAGTTCTACATCTTGATCCGAAGGCAGTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: GSMAVCRHIWRT*EFYILIRRQSG Trigger: TCCTGACTGCCTTCGGATCAAGATGTAGAACTCTCAGGTCCTCCAGATGTGCCTGCACACTGCCATGCTTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS-3UTR CCA 90 bp | ACTTCCTTCAACAAGGCCACACCTCCCAATAGTGCCACTTCCCAAGGGCCAAGCGGCCATTCATGGCCATaGCGAGGCTGTAGAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: TSFNKATPPNSATSQGPSGHSWP*RGCREP Trigger: TGGCTCTCTACAGCCTCGCCATGGCCATGAATGGCC...GCTTGGCCCTTGGGAAGTGGCACTATTGGGAGGTGTGGCCTTGTTGAAGGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS-3UTR CCA 90 bp | ACTATAAAGCCTGCCCACACAGTGACACACACTTCCTTCAACAAGGCCACACCTAGGCCCTGCGGAGGATaGAGGCCAGGATGCGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: TIKPAHTVTHTSFNKATPRPCGG*RPGCGH Trigger: ATGCCCGCATCCTGGCCTCCATCCTCCGCAGGGCCT...AGGTGTGGCCTTGTTGAAGGAAGTGTGTGTCACTGTGTGGGCAGGCTTTATAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS-3UTR TCA 90 bp | GCAATGAATACTCATTCCTGGACTCTGGTGGAAATGGTGAAGCCAGGAAGGAGTTGTCTTCCCCCTACCTaGGGAGGAGGCCCTGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: AMNTHSWTLVEMVKPGRSCLPPT*GGGPAE Trigger: CTCCGCAGGGCCTCCTCCTCAGGTAGGGGGAAGACA...ACTCCTTCCTGGCTTCACCATTTCCACCAGAGTCCAGGAATGAGTATTCATTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS-3UTR GCA 90 bp | ACTTCCTTCAACAAGGCCACACCTCCCAATAGTGCCACTTCCCAAGGGCCAAGCAGATGGACCAACATCTaGGGGATGGTGGTGGTGATG | + |
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Preference number: 4 (lower is better) Translates to: TSFNKATPPNSATSQGPSRWTNI*GMVVVM Trigger: CATCACCACCACCATCCCGCAGATGTTGGTCCATCT...GCTTGGCCCTTGGGAAGTGGCACTATTGGGAGGTGTGGCCTTGTTGAAGGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS-3UTR CCA 90 bp | CAGTCAGGAGGAGTAGACAACCAGGAGGGGACTCTCTTCCACACTGGGCAGAGCAGAGAGCGATCACTATaGGAGCCTCACAGAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: QSGGVDNQEGTLFHTGQSRERSL*EPHRRS Trigger: ACTTCTTCTGTGAGGCTCCCATAGTGATCGCTCTCT...GCTCTGCCCAGTGTGGAAGAGAGTCCCCTCCTGGTTGTCTACTCCTCCTGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS-3UTR CCA 90 bp | ACTTCCTTCAACAAGGCCACACCTCCCAATAGTGCCACTTCCCAAGGGCCAAGCTTCTTGGTCACCAGATaGACCAACATCTGCGGGATG | + |
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Preference number: 4 (lower is better) Translates to: TSFNKATPPNSATSQGPSFLVTR*TNICGM Trigger: CATCCCGCAGATGTTGGTCCATCTGGTGACCAAGAA...GCTTGGCCCTTGGGAAGTGGCACTATTGGGAGGTGTGGCCTTGTTGAAGGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS-3UTR GCA 90 bp | GCAATGAATACTCATTCCTGGACTCTGGTGGAAATGGTGAAGCCAGGAAGGAGTGTGGAAGGGGAGCTCTaGTCAAAGCCCACGAGGATG | + |
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Preference number: 4 (lower is better) Translates to: AMNTHSWTLVEMVKPGRSVEGEL*SKPTRM Trigger: CATCCTCGTGGGCTTTGAGCAGAGCTCCCCTTCCAC...ACTCCTTCCTGGCTTCACCATTTCCACCAGAGTCCAGGAATGAGTATTCATTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS-3UTR GCA 90 bp | ACTATAAAGCCTGCCCACACAGTGACACACACTTCCTTCAACAAGGCCACACCTACTCAGTCACAGTGCTaGTGTTCTTCGGGTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: TIKPAHTVTHTSFNKATPTQSQC*CSSGLL Trigger: CAGCAGACCCGAAGAACAGCAGCACTGTGACTGAGT...AGGTGTGGCCTTGTTGAAGGAAGTGTGTGTCACTGTGTGGGCAGGCTTTATAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS-3UTR CCA 90 bp | CTCGAGTCCAATGCTAAGGCAGCAATGAATACTCATTCCTGGACTCTGGTGGAAAGAGCAATGCCCGTGTaGAAGGGGAGCTCTGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: LESNAKAAMNTHSWTLVERAMPV*KGSSAQ Trigger: TTGAGCAGAGCTCCCCTTCCACACGGGCATTGCTCT...TTCCACCAGAGTCCAGGAATGAGTATTCATTGCTGCCTTAGCATTGGACTCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS-3UTR CCA 90 bp | ACTATAAAGCCTGCCCACACAGTGACACACACTTCCTTCAACAAGGCCACACCTAGACAGTGTGGTTCTTaGTCACCAGATGGACCAACA | + |
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Preference number: 4 (lower is better) Translates to: TIKPAHTVTHTSFNKATPRQCGS*SPDGPT Trigger: TGTTGGTCCATCTGGTGACCAAGAACCACACTGTCT...AGGTGTGGCCTTGTTGAAGGAAGTGTGTGTCACTGTGTGGGCAGGCTTTATAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS-3UTR CCA 90 bp | ACTTCCTTCAACAAGGCCACACCTCCCAATAGTGCCACTTCCCAAGGGCCAAGCAAGAAGTTCTCTATGTaGTTGTCTTTGCAGAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: TSFNKATPPNSATSQGPSKKFSM*LSLQKG Trigger: TCCCTTCTGCAAAGACAACCACATAGAGAACTTCTT...GCTTGGCCCTTGGGAAGTGGCACTATTGGGAGGTGTGGCCTTGTTGAAGGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS-3UTR CCA 90 bp | CTCGAGTCCAATGCTAAGGCAGCAATGAATACTCATTCCTGGACTCTGGTGGAAACAAAGGAGACAGTGTaGTTCTTGGTCACCAGATGG | + |
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Preference number: 4 (lower is better) Translates to: LESNAKAAMNTHSWTLVETKETV*FLVTRW Trigger: CCATCTGGTGACCAAGAACCACACTGTCTCCTTTGT...TTCCACCAGAGTCCAGGAATGAGTATTCATTGCTGCCTTAGCATTGGACTCGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS-3UTR TCA 90 bp | GCAGCAATGAATACTCATTCCTGGACTCTGGTGGAAATGGTGAAGCCAGGAAGGGTAAGAAAACATGGCTaGGGTGTAGAAAAAGACAAC | + |
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Preference number: 4 (lower is better) Translates to: AAMNTHSWTLVEMVKPGRVRKHG*GVEKDN Trigger: GTTGTCTTTTTCTACACCTCAGCCATGTTTTCTTAC...CCTTCCTGGCTTCACCATTTCCACCAGAGTCCAGGAATGAGTATTCATTGCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS-3UTR GCA 90 bp | GGAGTTAACTCTTCACTGTGCAGTGAAGGGAACTTTTTCCTTATAGATCTTCCTCAGGCCCATGTGTACTaGGGGGATTCATGTAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: GVNSSLCSEGNFFLIDLPQAHVY*GDSCKK Trigger: TTTCTTACATGAATCCCCGCAGTACACATGGGCCTG...AGGAAGATCTATAAGGAAAAAGTTCCCTTCACTGCACAGTGAAGAGTTAACTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS-3UTR CCA 90 bp | ACTATAAAGCCTGCCCACACAGTGACACACACTTCCTTCAACAAGGCCACACCTTCATGTAAGAAAACATaGCTGAGGTGTAGAAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: TIKPAHTVTHTSFNKATPSCKKT*LRCRKR Trigger: TCTTTTTCTACACCTCAGCCATGTTTTCTTACATGA...AGGTGTGGCCTTGTTGAAGGAAGTGTGTGTCACTGTGTGGGCAGGCTTTATAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS-3UTR GCA 90 bp | GGAGTTAACTCTTCACTGTGCAGTGAAGGGAACTTTTTCCTTATAGATCTTCCTAGTACATCTGGGTCATaGAAGAGACAAAGGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: GVNSSLCSEGNFFLIDLPSTSGS*KRQRRQ Trigger: CTGTCTCCTTTGTCTCTTGCATGACCCAGATGTACT...AGGAAGATCTATAAGGAAAAAGTTCCCTTCACTGCACAGTGAAGAGTTAACTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS TCA 90 bp | GGCCATTCATGGCCATGGCGAGGCTGTAGAGAGCCAGGAAGAGGGTaGAGAGCAATGCCCGTGTGGAAGGGGAGCTCTGCTCAAAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: GHSWPWRGCREPGRG*RAMPVWKGSSAQSP Trigger: TGGGCTTTGAGCAGAGCTCCCCTTCCACACGGGCATTGCTCTTCACCCTCTTCCTGGCTCTCTACAGCCTCGCCATGGCCATGAATGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS GCA 90 bp | GGCCATGGCGAGGCTGTAGAGAGCCAGGAAGAGGGTGAAGAGCAATaGCCGTGTGGAAGGGGAGCTCTGCTCAAAGCCCACGAGGATGAA | + |
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Preference number: 5 (lower is better) Translates to: GHGEAVESQEEGEEQ*PCGRGALLKAHEDE Trigger: TTCATCCTCGTGGGCTTTGAGCAGAGCTCCCCTTCCACACGGGCATTGCTCTTCACCCTCTTCCTGGCTCTCTACAGCCTCGCCATGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS TCA 90 bp | GCAATGCCCGTGTGGAAGGGGAGCTCTGCTCAAAGCCCACGAGGATaGACTCAGTCACAGTGCTGCTGTTCTTCGGGTCTGCTGTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: AMPVWKGSSAQSPRG*TQSQCCCSSGLLSG Trigger: CCCAGACAGCAGACCCGAAGAACAGCAGCACTGTGACTGAGTTCATCCTCGTGGGCTTTGAGCAGAGCTCCCCTTCCACACGGGCATTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS-3UTR CAA 90 bp | GCAGCAATGAATACTCATTCCTGGACTCTGGTGGAAATGGTGAAGCCAGGAAGGAGGAGAGAGAAAGGCTaGTCTTTGTCAGGCCCATGT | + |
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Preference number: 5 (lower is better) Translates to: AAMNTHSWTLVEMVKPGRRREKG*SLSGPC Trigger: ACATGGGCCTGACAAAGACAAGCCTTTCTCTCTCCT...CCTTCCTGGCTTCACCATTTCCACCAGAGTCCAGGAATGAGTATTCATTGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS-3UTR CAA 90 bp | AATGAATACTCATTCCTGGACTCTGGTGGAAATGGTGAAGCCAGGAAGGAGTTAGAGAAAGGCTTGTCTTaGTCAGGCCCATGTGTACTG | + |
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Preference number: 5 (lower is better) Translates to: NEYSFLDSGGNGEARKELEKGLS*SGPCVL Trigger: CAGTACACATGGGCCTGACAAAGACAAGCCTTTCTC...TAACTCCTTCCTGGCTTCACCATTTCCACCAGAGTCCAGGAATGAGTATTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS TCA 72 bp | TGGCCATGGCGAGGCTGTAGAGAGCCAGGAAGAGGGTaGAGAGCAATGCCCGTGTGGAAGGGGAGCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: WPWRGCREPGRG*RAMPVWKGSSA Trigger: AGCAGAGCTCCCCTTCCACACGGGCATTGCTCTTCACCCTCTTCCTGGCTCTCTACAGCCTCGCCATGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS TCA 72 bp | GTGTGGAAGGGGAGCTCTGCTCAAAGCCCACGAGGATaGACTCAGTCACAGTGCTGCTGTTCTTCGGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: VWKGSSAQSPRG*TQSQCCCSSGL Trigger: CAGACCCGAAGAACAGCAGCACTGTGACTGAGTTCATCCTCGTGGGCTTTGAGCAGAGCTCCCCTTCCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS CCA 72 bp | GGGTCATGCAAGAGACAAAGGAGACAGTGTGGTTCTTaGTCACCAGATGGACCAACATCTGCGGGATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GSCKRQRRQCGS*SPDGPTSAGWW Trigger: CCACCATCCCGCAGATGTTGGTCCATCTGGTGACCAAGAACCACACTGTCTCCTTTGTCTCTTGCATGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS CAA 72 bp | TGGGTCATGCAAGAGACAAAGGAGACAGTGTGGTTCTaGGTCACCAGATGGACCAACATCTGCGGGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: WVMQETKETVWF*VTRWTNICGMV Trigger: CACCATCCCGCAGATGTTGGTCCATCTGGTGACCAAGAACCACACTGTCTCCTTTGTCTCTTGCATGACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS CAA 90 bp | AGCAACACCACAATGGCATCCACAAAGATCAACTTCATGGTGAACTaGAGGTCCCCGCAGGAGAGAGCGATCACTATGGGAGCCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: SNTTMASTKINFMVN*RSPQERAITMGASQ Trigger: CTGTGAGGCTCCCATAGTGATCGCTCTCTCCTGCGGGGACCTCAAGTTCACCATGAAGTTGATCTTTGTGGATGCCATTGTGGTGTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS CAA 90 bp | AAGTACATCTGGGTCATGCAAGAGACAAAGGAGACAGTGTGGTTCTaGGTCACCAGATGGACCAACATCTGCGGGATGGTGGTGGTGATG | + |
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Preference number: 6 (lower is better) Translates to: KYIWVMQETKETVWF*VTRWTNICGMVVVM Trigger: CATCACCACCACCATCCCGCAGATGTTGGTCCATCTGGTGACCAAGAACCACACTGTCTCCTTTGTCTCTTGCATGACCCAGATGTACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS CCA 72 bp | TACATCTGGGTCATGCAAGAGACAAAGGAGACAGTGTaGTTCTTGGTCACCAGATGGACCAACATCTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: YIWVMQETKETV*FLVTRWTNICG Trigger: CCCGCAGATGTTGGTCCATCTGGTGACCAAGAACCACACTGTCTCCTTTGTCTCTTGCATGACCCAGATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS CCA 72 bp | CACTCGGCCACACCCACTAGAAAGACCAAGTACATCTaGGTCATGCAAGAGACAAAGGAGACAGTGTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: HSATPTRKTKYI*VMQETKETVWF Trigger: GAACCACACTGTCTCCTTTGTCTCTTGCATGACCCAGATGTACTTGGTCTTTCTAGTGGGTGTGGCCGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS CAA 72 bp | ACAATGGCATCCACAAAGATCAACTTCATGGTGAACTaGAGGTCCCCGCAGGAGAGAGCGATCACTATGGGA | + |
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Preference number: 6 (lower is better) Translates to: TMASTKINFMVN*RSPQERAITMG Trigger: TCCCATAGTGATCGCTCTCTCCTGCGGGGACCTCAAGTTCACCATGAAGTTGATCTTTGTGGATGCCATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS CAA 90 bp | TTGCAGAAGGGATTCCTGAATGATATATACTCAAGAAAGATACCATaGACCATCCCAAAGATCCAGGAAGAACACACCAGCCTGACACAC | + |
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Preference number: 6 (lower is better) Translates to: LQKGFLNDIYSRKIP*TIPKIQEEHTSLTH Trigger: GTGTGTCAGGCTGGTGTGTTCTTCCTGGATCTTTGGGATGGTCAATGGTATCTTTCTTGAGTATATATCATTCAGGAATCCCTTCTGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS CAA 90 bp | AGAGCGATCACTATGGGAGCCTCACAGAAGAAGTTCTCTATGTGGTaGTCTTTGCAGAAGGGATTCCTGAATGATATATACTCAAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: RAITMGASQKKFSMW*SLQKGFLNDIYSRK Trigger: CTTTCTTGAGTATATATCATTCAGGAATCCCTTCTGCAAAGACAACCACATAGAGAACTTCTTCTGTGAGGCTCCCATAGTGATCGCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS CAA 72 bp | GGAGCCTCACAGAAGAAGTTCTCTATGTGGTTGTCTTaGCAGAAGGGATTCCTGAATGATATATACTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: GASQKKFSMWLS*QKGFLNDIYSR Trigger: TCTTGAGTATATATCATTCAGGAATCCCTTCTGCAAAGACAACCACATAGAGAACTTCTTCTGTGAGGCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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| CDS CAA 90 bp | ATCACTATGGGAGCCTCACAGAAGAAGTTCTCTATGTGGTTGTCTTaGCAGAAGGGATTCCTGAATGATATATACTCAAGAAAGATACCA | + |
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Preference number: 6 (lower is better) Translates to: ITMGASQKKFSMWLS*QKGFLNDIYSRKIP Trigger: TGGTATCTTTCTTGAGTATATATCATTCAGGAATCCCTTCTGCAAAGACAACCACATAGAGAACTTCTTCTGTGAGGCTCCCATAGTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170618.8 |
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