Pregenerated sensors for OLFR285 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062037Ensembl transcript IDs: ENSMUST00000079736.3, ENSMUST00000216901.2
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCGTGTGTGCCTGGTGCCTGAGCAGCGAGAAGAGGGCAGTGGTATaGCTGCTGGGAATAGAGCCCGGAGGGCTAGTGCTATTACCTAAT | + |
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Preference number: 1 (lower is better) Translates to: CVCAWCLSSEKRAVV*LLGIEPGGLVLLPN Trigger: ATTAGGTAATAGCACTAGCCCTCCGGGCTCTATTCCCAGCAGCCATACCACTGCCCTCTTCTCGCTGCTCAGGCACCAGGCACACACGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR GCA 90 bp | CACAGTGCATCATCCTTACAGCCCTCTTCACCGGTTTTGGTGCAATaGTCTTTTGCACAGTATGACCATTACAGCCATGTTCCCTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: HSASSLQPSSPVLVQ*SFAQYDHYSHVPCS Trigger: GGAGCAGGGAACATGGCTGTAATGGTCATACTGTGCAAAAGAGCATTGCACCAAAACCGGTGAAGAGGGCTGTAAGGATGATGCACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR TCA 90 bp | GCAGTCTTCCTGGTCTCTTTAACTCCGGTGCAGTATTTCCCTCGGTaGTGCACTCAGTGGGTGCATTTAGTTTTACCTTTTACACAAAGG | + |
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Preference number: 1 (lower is better) Translates to: AVFLVSLTPVQYFPR*CTQWVHLVLPFTQR Trigger: CCTTTGTGTAAAAGGTAAAACTAAATGCACCCACTGAGTGCATCACCGAGGGAAATACTGCACCGGAGTTAAAGAGACCAGGAAGACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR CCA 90 bp | AGCACTCTTAAGTCATCTCTCCTGCCTCTAAATCCCCTTTTACTTTaGAAACTCTGGACTTGCAAGTTACTTCTTTGCCTCTTAGTACTG | + |
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Preference number: 1 (lower is better) Translates to: STLKSSLLPLNPLLL*KLWTCKLLLCLLVL Trigger: CAGTACTAAGAGGCAAAGAAGTAACTTGCAAGTCCAGAGTTTCCAAAGTAAAAGGGGATTTAGAGGCAGGAGAGATGACTTAAGAGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR CCA 90 bp | AAGTCATCTCTCCTGCCTCTAAATCCCCTTTTACTTTGGAAACTCTaGACTTGCAAGTTACTTCTTTGCCTCTTAGTACTGTATATGACC | + |
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Preference number: 1 (lower is better) Translates to: KSSLLPLNPLLLWKL*TCKLLLCLLVLYMT Trigger: GGTCATATACAGTACTAAGAGGCAAAGAAGTAACTTGCAAGTCCAGAGTTTCCAAAGTAAAAGGGGATTTAGAGGCAGGAGAGATGACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGATCCACTCCTTTTCCATTTCCTTTCAGAAAAGGGCAGGTCTCCCAGAGAAAGAGGGCAGTGGTATaGCTGCTGGGAATAGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: PRSTPFPFPFRKGQVSQRKRAVV*LLGIEP Trigger: GGGCTCTATTCCCAGCAGCCATACCACTGCCCTCTT...TCTCTGGGAGACCTGCCCTTTTCTGAAAGGAAATGGAAAAGGAGTGGATCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGATCCACTCCTTTTCCATTTCCTTTCAGAAAAGGGCAGGTCTCCCAGAGATGGGGTCAGTGGTGCTaGGTCTGTCAATTTTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: PRSTPFPFPFRKGQVSQRWGQWC*VCQFCH Trigger: GTGACAAAATTGACAGACTCAGCACCACTGACCCCA...TCTCTGGGAGACCTGCCCTTTTCTGAAAGGAAATGGAAAAGGAGTGGATCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGCAGTATTTCCCTCGGTGATGCACTCAGTGGGTGCATTTAGTTTTACCTTTGCCGGGTGGTGGTGGTaGACAGTTTTAATCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: GAVFPSVMHSVGAFSFTFAGWWW*TVLIPA Trigger: TGCTGGGATTAAAACTGTGCACCACCACCACCCGGC...AAAGGTAAAACTAAATGCACCCACTGAGTGCATCACCGAGGGAAATACTGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGTCAGTGGTGCTGAGTCTGTCAATTTTGTCACAATAGTTTCGGCAGTCTTCTGCTCTGCCGGGTGGTaGTGGTGCACAGTTTTAATC | + |
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Preference number: 2 (lower is better) Translates to: GVSGAESVNFVTIVSAVFCSAGW*WCTVLI Trigger: GATTAAAACTGTGCACCACCACCACCCGGCAGAGCA...GAAGACTGCCGAAACTATTGTGACAAAATTGACAGACTCAGCACCACTGACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR TCA 90 bp | AACATTATAGCCATTGAAGGTAGATCTGTGATTGCCAAGGGCCCGGAGATGAAGGGAGTTGAAACAGAATaGCCAGACACGACATCCCAG | + |
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Preference number: 2 (lower is better) Translates to: NIIAIEGRSVIAKGPEMKGVETE*PDTTSQ Trigger: CTGGGATGTCGTGTCTGGTCATTCTGTTTCAACTCC...CTTCATCTCCGGGCCCTTGGCAATCACAGATCTACCTTCAATGGCTATAATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGATCCACTCCTTTTCCATTTCCTTTCAGAAAAGGGCAGGTCTCCCAGAGACTCTTTTGCACAGTATaGCCATTACAGCCATGTTCC | + |
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Preference number: 2 (lower is better) Translates to: PRSTPFPFPFRKGQVSQRLFCTV*PLQPCS Trigger: GGAACATGGCTGTAATGGTCATACTGTGCAAAAGAG...TCTCTGGGAGACCTGCCCTTTTCTGAAAGGAAATGGAAAAGGAGTGGATCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGCAGTATTTCCCTCGGTGATGCACTCAGTGGGTGCATTTAGTTTTACCTTTATAATAATTGTGCTCTaGCGGGTGGTGGTGGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: GAVFPSVMHSVGAFSFTFIIIVL*RVVVVH Trigger: GTGCACCACCACCACCCGGCAGAGCACAATTATTAT...AAAGGTAAAACTAAATGCACCCACTGAGTGCATCACCGAGGGAAATACTGCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGTCAGTGGTGCTGAGTCTGTCAATTTTGTCACAATAGTTTCGGCAGTCTTCTGTCTTTGTTCACAGTaGATCATCCTTACAGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: GVSGAESVNFVTIVSAVFCLCSQ*IILTAL Trigger: GAGGGCTGTAAGGATGATGCACTGTGAACAAAGACA...GAAGACTGCCGAAACTATTGTGACAAAATTGACAGACTCAGCACCACTGACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR CAA 90 bp | TGCAAGTTACTTCTTTGCCTCTTAGTACTGTATATGACCACCACCTaGACCTCTGGCCAGCTTTACAACCCAGGAATGTCTGTCTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: CKLLLCLLVLYMTTT*TSGQLYNPGMSVSK Trigger: CTTTGAGACAGACATTCCTGGGTTGTAAAGCTGGCCAGAGGTCAAGGTGGTGGTCATATACAGTACTAAGAGGCAAAGAAGTAACTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR TCA 90 bp | GAGATGAAGGGAAATGTATTCCTAATTAGCCCATGGGCACTTTGTGTTAGCATAAGCGTCCAACTTCAGTaGGATGTCCCTTGCCTCACT | + |
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Preference number: 2 (lower is better) Translates to: EMKGNVFLISPWALCVSISVQLQ*DVPCLT Trigger: AGTGAGGCAAGGGACATCTCACTGAAGTTGGACGCT...TATGCTAACACAAAGTGCCCATGGGCTAATTAGGAATACATTTCCCTTCATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGCAGTATTTCCCTCGGTGATGCACTCAGTGGGTGCATTTAGTTTTACCTTTGCTAGACATTGGAGTTaGAACAGAATGACCAGACAC | + |
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Preference number: 2 (lower is better) Translates to: GAVFPSVMHSVGAFSFTFARHWS*NRMTRH Trigger: GTGTCTGGTCATTCTGTTTCAACTCCAATGTCTAGC...AAAGGTAAAACTAAATGCACCCACTGAGTGCATCACCGAGGGAAATACTGCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGCAGTATTTCCCTCGGTGATGCACTCAGTGGGTGCATTTAGTTTTACCTTTTCAGTATCACTGTGGTaGGAGAAAGGATGCATACAC | + |
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Preference number: 2 (lower is better) Translates to: GAVFPSVMHSVGAFSFTFSVSLW*EKGCIH Trigger: GTGTATGCATCCTTTCTCTCACCACAGTGATACTGA...AAAGGTAAAACTAAATGCACCCACTGAGTGCATCACCGAGGGAAATACTGCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGTCAGTGGTGCTGAGTCTGTCAATTTTGTCACAATAGTTTCGGCAGTCTTCATGAGTCAGATGATTTaGGGCTTTGACTCTGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: GVSGAESVNFVTIVSAVFMSQMI*GFDSEE Trigger: TTCTTCAGAGTCAAAGCCTCAAATCATCTGACTCAT...GAAGACTGCCGAAACTATTGTGACAAAATTGACAGACTCAGCACCACTGACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCATTTCCTTTCAGAAAAGGGCAGGTCTCCCAGAGATGCCTAGATTTATTTCCTCTTCACCGGTTTTaGTGCAATGCTCTTTTGCAC | + |
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Preference number: 2 (lower is better) Translates to: FPFPFRKGQVSQRCLDLFPLHRF*CNALLH Trigger: GTGCAAAAGAGCATTGCACCAAAACCGGTGAAGAGG...AAATAAATCTAGGCATCTCTGGGAGACCTGCCCTTTTCTGAAAGGAAATGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCCATTTCCTTTCAGAAAAGGGCAGGTCTCCCAGAGATGCCTAGATTTATTTCCGGTTTTGGTGCAATaGTCTTTTGCACAGTATGAC | + |
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Preference number: 2 (lower is better) Translates to: FPFPFRKGQVSQRCLDLFPVLVQ*SFAQYD Trigger: GTCATACTGTGCAAAAGAGCATTGCACCAAAACCGG...AAATAAATCTAGGCATCTCTGGGAGACCTGCCCTTTTCTGAAAGGAAATGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCCTGCTCCTCCTCACAACAGGGAACTTTCTCTTCCACATAGACATCTCTTCGTTATTTTCTTTGTCTaGTTTTGGTATCAGGATCTC | + |
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Preference number: 2 (lower is better) Translates to: FPAPPHNRELSLPHRHLFVIFFV*FWYQDL Trigger: GAGATCCTGATACCAAAACCAGACAAAGAAAATAAC...GAAGAGATGTCTATGTGGAAGAGAAAGTTCCCTGTTGTGAGGAGGAGCAGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCATTTCCTTTCAGAAAAGGGCAGGTCTCCCAGAGATGCCTAGATTTATTTAGGTATTTACCTGGGTaGATGACTGCATACATCATC | + |
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Preference number: 2 (lower is better) Translates to: FPFPFRKGQVSQRCLDLFRYLPG*MTAYII Trigger: GATGATGTATGCAGTCATCCACCCAGGTAAATACCT...AAATAAATCTAGGCATCTCTGGGAGACCTGCCCTTTTCTGAAAGGAAATGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGTCTCTGACAATAAGGACTCAGAGAATCTCAGAGAAAATCACTTAAAAACTATGTACTTCACACCATaGCTGCATCAATGTGAACTC | + |
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Preference number: 2 (lower is better) Translates to: WVSDNKDSENLRENHLKTMYFTP*LHQCEL Trigger: GAGTTCACATTGATGCAGTCATGGTGTGAAGTACAT...AGTTTTTAAGTGATTTTCTCTGAGATTCTCTGAGTCCTTATTGTCAGAGACCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR CCA 72 bp | GCCTGGTGCCTGAGCAGCGAGAAGAGGGCAGTGGTATaGCTGCTGGGAATAGAGCCCGGAGGGCTAGTGCTA | + |
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Preference number: 3 (lower is better) Translates to: AWCLSSEKRAVV*LLGIEPGGLVL Trigger: TAGCACTAGCCCTCCGGGCTCTATTCCCAGCAGCCATACCACTGCCCTCTTCTCGCTGCTCAGGCACCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR CCA 72 bp | AAACTCAGGATGACCCAATGCGCTGGCTCTGCTCCGTaGACTAACATCCCTGACAATGTCATCCAGAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: KLRMTQCAGSAP*TNIPDNVIQSL Trigger: AAGGCTCTGGATGACATTGTCAGGGATGTTAGTCCACGGAGCAGAGCCAGCGCATTGGGTCATCCTGAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR TCA 72 bp | AGGGGCATTCCTCTGGAAAAATCCCAGTGTTTGCACTaGGCGTCCAACTTCAGTGAGATGTCCCTTGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: RGIPLEKSQCLH*ASNFSEMSLAS Trigger: TGAGGCAAGGGACATCTCACTGAAGTTGGACGCTCAGTGCAAACACTGGGATTTTTCCAGAGGAATGCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR TCA 72 bp | AAAATCCCAGTGTTTGCACTGAGCGTCCAACTTCAGTaGGATGTCCCTTGCCTCACTCCGTGTGCTGATATC | + |
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Preference number: 3 (lower is better) Translates to: KIPVFALSVQLQ*DVPCLTPCADI Trigger: GATATCAGCACACGGAGTGAGGCAAGGGACATCTCACTGAAGTTGGACGCTCAGTGCAAACACTGGGATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR GCA 72 bp | AAGGAAGGGGCATTCCTCTGGAAAAATCCCAGTGTTTaGACTGAGCGTCCAACTTCAGTGAGATGTCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: KEGAFLWKNPSV*TERPTSVRCPL Trigger: CAAGGGACATCTCACTGAAGTTGGACGCTCAGTGCAAACACTGGGATTTTTCCAGAGGAATGCCCCTTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR TCA 72 bp | TTCACCGGTTTTGGTGCAATGCTCTTTTGCACAGTATaGCCATTACAGCCATGTTCCCTGCTCCTCCTCACA | + |
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Preference number: 3 (lower is better) Translates to: FTGFGAMLFCTV*PLQPCSLLLLT Trigger: TGTGAGGAGGAGCAGGGAACATGGCTGTAATGGTCATACTGTGCAAAAGAGCATTGCACCAAAACCGGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR TCA 72 bp | ATCACTCCTGGGCTAGACATTGGAGTTGAAACAGAATaGCCAGACACGACATCCCAGGAATTCCCTAGCATA | + |
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Preference number: 3 (lower is better) Translates to: ITPGLDIGVETE*PDTTSQEFPSI Trigger: TATGCTAGGGAATTCCTGGGATGTCGTGTCTGGTCATTCTGTTTCAACTCCAATGTCTAGCCCAGGAGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR GCA 72 bp | TCTTTTGCACAGTATGACCATTACAGCCATGTTCCCTaGTCCTCCTCACAACAGGGAACTTTCTCTTCCACA | + |
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Preference number: 3 (lower is better) Translates to: SFAQYDHYSHVP*SSSQQGTFSST Trigger: TGTGGAAGAGAAAGTTCCCTGTTGTGAGGAGGAGCAGGGAACATGGCTGTAATGGTCATACTGTGCAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR CCA 72 bp | CCTCTTAGTACTGTATATGACCACCACCTTGACCTCTaGCCAGCTTTACAACCCAGGAATGTCTGTCTCAAA | + |
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Preference number: 3 (lower is better) Translates to: PLSTVYDHHLDL*PALQPRNVCLK Trigger: TTTGAGACAGACATTCCTGGGTTGTAAAGCTGGCCAGAGGTCAAGGTGGTGGTCATATACAGTACTAAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR TCA 72 bp | CTGGTCTCTTTAACTCCGGTGCAGTATTTCCCTCGGTaGTGCACTCAGTGGGTGCATTTAGTTTTACCTTTT | + |
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Preference number: 3 (lower is better) Translates to: LVSLTPVQYFPR*CTQWVHLVLPF Trigger: AAAAGGTAAAACTAAATGCACCCACTGAGTGCATCACCGAGGGAAATACTGCACCGGAGTTAAAGAGACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR GCA 72 bp | TCATCCTTACAGCCCTCTTCACCGGTTTTGGTGCAATaGTCTTTTGCACAGTATGACCATTACAGCCATGTT | + |
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Preference number: 3 (lower is better) Translates to: SSLQPSSPVLVQ*SFAQYDHYSHV Trigger: AACATGGCTGTAATGGTCATACTGTGCAAAAGAGCATTGCACCAAAACCGGTGAAGAGGGCTGTAAGGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR CCA 72 bp | ACAGTGCATCATCCTTACAGCCCTCTTCACCGGTTTTaGTGCAATGCTCTTTTGCACAGTATGACCATTACA | + |
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Preference number: 3 (lower is better) Translates to: TVHHPYSPLHRF*CNALLHSMTIT Trigger: TGTAATGGTCATACTGTGCAAAAGAGCATTGCACCAAAACCGGTGAAGAGGGCTGTAAGGATGATGCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGTCAGTGGTGCTGAGTCTGTCAATTTTGTCACAATAGTTTCGGCAGTCTTCTTTACTAGGATGTCTTaGTTCACAGTGCATCATCCT | + |
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Preference number: 3 (lower is better) Translates to: GVSGAESVNFVTIVSAVFFTRMS*FTVHHP Trigger: AGGATGATGCACTGTGAACAAAGACATCCTAGTAAA...GAAGACTGCCGAAACTATTGTGACAAAATTGACAGACTCAGCACCACTGACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGTCAGTGGTGCTGAGTCTGTCAATTTTGTCACAATAGTTTCGGCAGTCTTCAGCAGATATGTTTGTTaGCCCAGATTATCCATAAGA | + |
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Preference number: 3 (lower is better) Translates to: GVSGAESVNFVTIVSAVFSRYVC*PRLSIR Trigger: TCTTATGGATAATCTGGGCAAACAAACATATCTGCT...GAAGACTGCCGAAACTATTGTGACAAAATTGACAGACTCAGCACCACTGACCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR TCA 72 bp | CTAACATCCCTGACAATGTCATCCAGAGCCTTCTATTaGCTCACTCCAGGGTTTAAAAATTCTCCTTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: LTSLTMSSRAFY*LTPGFKNSPSC Trigger: ACAGGAAGGAGAATTTTTAAACCCTGGAGTGAGTCAATAGAAGGCTCTGGATGACATTGTCAGGGATGTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR CCA 72 bp | CTCCTGCCTCTAAATCCCCTTTTACTTTGGAAACTCTaGACTTGCAAGTTACTTCTTTGCCTCTTAGTACTG | + |
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Preference number: 3 (lower is better) Translates to: LLPLNPLLLWKL*TCKLLLCLLVL Trigger: CAGTACTAAGAGGCAAAGAAGTAACTTGCAAGTCCAGAGTTTCCAAAGTAAAAGGGGATTTAGAGGCAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR TCA 72 bp | TCCATAATTCCTCTCCTAGGTATTTACCTGGGTGGATaGCTGCATACATCATCACAAACATTTCTACCCACA | + |
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Preference number: 3 (lower is better) Translates to: SIIPLLGIYLGG*LHTSSQTFLPT Trigger: TGTGGGTAGAAATGTTTGTGATGATGTATGCAGTCATCCACCCAGGTAAATACCTAGGAGAGGAATTATGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR TCA 72 bp | TGTCTGGTTTTGGTATCAGGATCTCATAAAGTTCCTTaGGAATCTTTGTGCTCCTCTGTGTTTTGGAAGCTC | + |
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Preference number: 3 (lower is better) Translates to: CLVLVSGSHKVP*ESLCSSVFWKL Trigger: GAGCTTCCAAAACACAGAGGAGCACAAAGATTCTCAAGGAACTTTATGAGATCCTGATACCAAAACCAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR CCA 72 bp | CAACTCCATAATTCCTCTCCTAGGTATTTACCTGGGTaGATGACTGCATACATCATCACAAACATTTCTACC | + |
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Preference number: 3 (lower is better) Translates to: QLHNSSPRYLPG*MTAYIITNIST Trigger: GGTAGAAATGTTTGTGATGATGTATGCAGTCATCCACCCAGGTAAATACCTAGGAGAGGAATTATGGAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR CCA 72 bp | CCGGAGATGAAGGGAAATGTATTCCTAATTAGCCCATaGGCACTTTGTGTTAGCATAGAAATATTTTATACA | + |
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Preference number: 3 (lower is better) Translates to: PEMKGNVFLISP*ALCVSIEIFYT Trigger: TGTATAAAATATTTCTATGCTAACACAAAGTGCCCATGGGCTAATTAGGAATACATTTCCCTTCATCTCCGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR TCA 72 bp | AACATTTCTACCCACATATGTGATTTAGAGAGTAAATaGACATATCAGTATCACTGTGGTGAGAGAAAGGAT | + |
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Preference number: 3 (lower is better) Translates to: NISTHICDLESK*TYQYHCGERKD Trigger: ATCCTTTCTCTCACCACAGTGATACTGATATGTTCATTTACTCTCTAAATCACATATGTGGGTAGAAATGTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| CDS-3UTR CCA 90 bp | CCCAGATCCACTCCTTTTCCATTTCCTTTCAGAAAAGGGCAGGTCTCCCAGAGAGATTCTCCAGCATCTTaGGTGTGGAGACTGACGAAT | + |
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Preference number: 4 (lower is better) Translates to: PRSTPFPFPFRKGQVSQRDSPAS*VWRLTN Trigger: ATTCGTCAGTCTCCACACCCAAGATGCTGGAGAATC...TCTCTGGGAGACCTGCCCTTTTCTGAAAGGAAATGGAAAAGGAGTGGATCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| CDS-3UTR GCA 90 bp | TTCCCTGCTCCTCCTCACAACAGGGAACTTTCTCTTCCACATAGACATCTCTTCGTGATGACGCTGTACTaGAGAGAGAAGAATGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: FPAPPHNRELSLPHRHLFVMTLY*REKNVS Trigger: GGAAACATTCTTCTCTCTGCAGTACAGCGTCATCAC...GAAGAGATGTCTATGTGGAAGAGAAAGTTCCCTGTTGTGAGGAGGAGCAGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| CDS-3UTR CCA 90 bp | GGGGTCAGTGGTGCTGAGTCTGTCAATTTTGTCACAATAGTTTCGGCAGTCTTCAACCCTTCACAGGGATaGTTTTTGTCTCAGACACCA | + |
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Preference number: 4 (lower is better) Translates to: GVSGAESVNFVTIVSAVFNPSQG*FLSQTP Trigger: TGGTGTCTGAGACAAAAACCATCCCTGTGAAGGGTT...GAAGACTGCCGAAACTATTGTGACAAAATTGACAGACTCAGCACCACTGACCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR CAA 72 bp | CTTCTTTGCCTCTTAGTACTGTATATGACCACCACCTaGACCTCTGGCCAGCTTTACAACCCAGGAATGTCT | + |
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Preference number: 4 (lower is better) Translates to: LLCLLVLYMTTT*TSGQLYNPGMS Trigger: AGACATTCCTGGGTTGTAAAGCTGGCCAGAGGTCAAGGTGGTGGTCATATACAGTACTAAGAGGCAAAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| CDS-3UTR CCA 90 bp | CAGGATCTCATAAAGTTCCTTGAGAATCTTTGTGCTCCTCTGTGTTTTGGAAGCCCAGCAGCTTTCTCATaGCCATCTTCACCTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: QDLIKFLENLCAPLCFGSPAAFS*PSSPPC Trigger: ACAAGGAGGTGAAGATGGCCATGAGAAAGCTGCTGG...GCTTCCAAAACACAGAGGAGCACAAAGATTCTCAAGGAACTTTATGAGATCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| CDS-3UTR GCA 90 bp | TGGGTCTCTGACAATAAGGACTCAGAGAATCTCAGAGAAAATCACTTAAAAACTGGAGCAGGTGGAAAATaGCTTGCTCCTACCCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: WVSDNKDSENLRENHLKTGAGGK*LAPTPG Trigger: ACCAGGGGTAGGAGCAAGGCATTTTCCACCTGCTCC...AGTTTTTAAGTGATTTTCTCTGAGATTCTCTGAGTCCTTATTGTCAGAGACCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| CDS-3UTR CCA 90 bp | CAGGATCTCATAAAGTTCCTTGAGAATCTTTGTGCTCCTCTGTGTTTTGGAAGCAGAAGAATGTTTCCATaGGAGAACCTGAGGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: QDLIKFLENLCAPLCFGSRRMFP*ENLRWA Trigger: TGCCCACCTCAGGTTCTCCCATGGAAACATTCTTCT...GCTTCCAAAACACAGAGGAGCACAAAGATTCTCAAGGAACTTTATGAGATCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| CDS-3UTR CCA 90 bp | GAGATGAAGGGAAATGTATTCCTAATTAGCCCATGGGCACTTTGTGTTAGCATACCTCAGTACCCCCAATaGCAAACACAAAGAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: EMKGNVFLISPWALCVSIPQYPQ*QTQRRL Trigger: AAGCCTTCTTTGTGTTTGCCATTGGGGGTACTGAGG...TATGCTAACACAAAGTGCCCATGGGCTAATTAGGAATACATTTCCCTTCATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| CDS-3UTR CCA 90 bp | GGATTATTTAAAAGATATTGGGCATCACATAGCCATTCAAATCCAAACAAGAGGCCTTGCTCCTACCCCTaGTGGAGCTCATGTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GLFKRYWASHSHSNPNKRPCSYP*WSSCSG Trigger: TCCTGAACATGAGCTCCACCAGGGGTAGGAGCAAGG...CCTCTTGTTTGGATTTGAATGGCTATGTGATGCCCAATATCTTTTAAATAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| CDS-3UTR GCA 90 bp | GGATTATTTAAAAGATATTGGGCATCACATAGCCATTCAAATCCAAACAAGAGGATGCTGGCAGCATCTTaGCAGCAGCTTTCTCATGGC | + |
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Preference number: 4 (lower is better) Translates to: GLFKRYWASHSHSNPNKRMLAAS*QQLSHG Trigger: GCCATGAGAAAGCTGCTGGCAAGATGCTGCCAGCAT...CCTCTTGTTTGGATTTGAATGGCTATGTGATGCCCAATATCTTTTAAATAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| CDS-3UTR CCA 90 bp | TGGGTCTCTGACAATAAGGACTCAGAGAATCTCAGAGAAAATCACTTAAAAACTTCACCAACAGAATCATaGTGTTCCCTGTCAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: WVSDNKDSENLRENHLKTSPTES*CSLSGS Trigger: TGACCCTGACAGGGAACACCATGATTCTGTTGGTGA...AGTTTTTAAGTGATTTTCTCTGAGATTCTCTGAGTCCTTATTGTCAGAGACCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| CDS-3UTR CCA 90 bp | GGATTATTTAAAAGATATTGGGCATCACATAGCCATTCAAATCCAAACAAGAGGAACACAAAGAAGGCTTaGGCCAGGCAACCCTTCACA | + |
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Preference number: 4 (lower is better) Translates to: GLFKRYWASHSHSNPNKRNTKKA*ARQPFT Trigger: TGTGAAGGGTTGCCTGGCCCAAGCCTTCTTTGTGTT...CCTCTTGTTTGGATTTGAATGGCTATGTGATGCCCAATATCTTTTAAATAATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| CDS-3UTR TCA 90 bp | GGATTATTTAAAAGATATTGGGCATCACATAGCCATTCAAATCCAAACAAGAGGTTCCAGAGGCGTGTATaGCAAAAGTACAGACTATGG | + |
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Preference number: 4 (lower is better) Translates to: GLFKRYWASHSHSNPNKRFQRRV*QKYRLW Trigger: CCATAGTCTGTACTTTTGTCATACACGCCTCTGGAA...CCTCTTGTTTGGATTTGAATGGCTATGTGATGCCCAATATCTTTTAAATAATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| 3UTR CAA 72 bp | GCCTCTAAATCCCCTTTTACTTTGGAAACTCTGGACTaGCAAGTTACTTCTTTGCCTCTTAGTACTGTATAT | + |
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Preference number: 4 (lower is better) Translates to: ASKSPFTLETLD*QVTSLPLSTVY Trigger: ATATACAGTACTAAGAGGCAAAGAAGTAACTTGCAAGTCCAGAGTTTCCAAAGTAAAAGGGGATTTAGAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| CDS-3UTR CAA 90 bp | GGTGCAGTATTTCCCTCGGTGATGCACTCAGTGGGTGCATTTAGTTTTACCTTTAAACACAAAGAAGGCTaGGGCCAGGCAACCCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: GAVFPSVMHSVGAFSFTFKHKEG*GQATLH Trigger: GTGAAGGGTTGCCTGGCCCAAGCCTTCTTTGTGTTT...AAAGGTAAAACTAAATGCACCCACTGAGTGCATCACCGAGGGAAATACTGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| CDS-3UTR CAA 90 bp | TTTCCATTTCCTTTCAGAAAAGGGCAGGTCTCCCAGAGATGCCTAGATTTATTTCAGGTGGAAAATGCCTaGCTCCTACCCCTGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: FPFPFRKGQVSQRCLDLFQVENA*LLPLVE Trigger: CTCCACCAGGGGTAGGAGCAAGGCATTTTCCACCTG...AAATAAATCTAGGCATCTCTGGGAGACCTGCCCTTTTCTGAAAGGAAATGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| CDS-3UTR CAA 90 bp | AACATTATAGCCATTGAAGGTAGATCTGTGATTGCCAAGGGCCCGGAGATGAAGTCACAGGGATGGTTTTaGTCTCAGACACCAGATTCT | + |
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Preference number: 5 (lower is better) Translates to: NIIAIEGRSVIAKGPEMKSQGWF*SQTPDS Trigger: AGAATCTGGTGTCTGAGACAAAAACCATCCCTGTGA...CTTCATCTCCGGGCCCTTGGCAATCACAGATCTACCTTCAATGGCTATAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| CDS-3UTR CAA 90 bp | TGGGTCTCTGACAATAAGGACTCAGAGAATCTCAGAGAAAATCACTTAAAAACTAATGCTGGCAGCATCTaGCCAGCAGCTTTCTCATGG | + |
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Preference number: 5 (lower is better) Translates to: WVSDNKDSENLRENHLKTNAGSI*PAAFSW Trigger: CCATGAGAAAGCTGCTGGCAAGATGCTGCCAGCATT...AGTTTTTAAGTGATTTTCTCTGAGATTCTCTGAGTCCTTATTGTCAGAGACCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216901.2 |
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| CDS TCA 72 bp | AGACACCAGATTCTCCAGCATCTTGGGTGTGGAGACTaGCGAATACAAAAGATCCAGGAAGGAGAGGTGACC | + |
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Preference number: 6 (lower is better) Translates to: RHQILQHLGCGD*RIQKIQEGEVT Trigger: GGTCACCTCTCCTTCCTGGATCTTTTGTATTCGTCAGTCTCCACACCCAAGATGCTGGAGAATCTGGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079736.3 ENSMUST00000216901.2 |
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| CDS CAA 90 bp | TTCACAGGGATGGTTTTTGTCTCAGACACCAGATTCTCCAGCATCTaGGGTGTGGAGACTGACGAATACAAAAGATCCAGGAAGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: FTGMVFVSDTRFSSI*GVETDEYKRSRKER Trigger: CCTCTCCTTCCTGGATCTTTTGTATTCGTCAGTCTCCACACCCAAGATGCTGGAGAATCTGGTGTCTGAGACAAAAACCATCCCTGTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079736.3 ENSMUST00000216901.2 |
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| CDS CAA 72 bp | ATGGTTTTTGTCTCAGACACCAGATTCTCCAGCATCTaGGGTGTGGAGACTGACGAATACAAAAGATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: MVFVSDTRFSSI*GVETDEYKRSR Trigger: CCTGGATCTTTTGTATTCGTCAGTCTCCACACCCAAGATGCTGGAGAATCTGGTGTCTGAGACAAAAACCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079736.3 ENSMUST00000216901.2 |
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| CDS CCA 72 bp | GGAAGAGGGAAGGAAACTCACAGTTGTAGTTGTGTATaGTTCCATAGTGACAAAAGTCCAAACTCACAGCTA | + |
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Preference number: 6 (lower is better) Translates to: GRGKETHSCSCV*FHSDKSPNSQL Trigger: TAGCTGTGAGTTTGGACTTTTGTCACTATGGAACCATACACAACTACAACTGTGAGTTTCCTTCCCTCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079736.3 ENSMUST00000216901.2 |
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