Pregenerated sensors for OLFR281 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032987Ensembl transcript IDs: ENSMUST00000109163.4, ENSMUST00000217517.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGGCCATGGAGAGGTGCTGCTTACTGACTTGCTCCTCATGGCTTaGTCAGCCTGCTTTTCTGTACAGAACCCAGGACACCCCCACCCC | + |
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Preference number: 1 (lower is better) Translates to: RGHGEVLLTDLLLMA*SACFSVQNPGHPHP Trigger: GGGGTGGGGGTGTCCTGGGTTCTGTACAGAAAAGCAGGCTGAGCAAGCCATGAGGAGCAAGTCAGTAAGCAGCACCTCTCCATGGCCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CCA 90 bp | GTCGGGGCAGGAACTCAAACAGGGCAGCAGCTGATGCAGAGGCCATaGAGGGATGCTGCTTACTGGCTTGTTCCTCATAGCTTGCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: VGAGTQTGQQLMQRP*RDAAYWLVPHSLLS Trigger: GCTGAGCAAGCTATGAGGAACAAGCCAGTAAGCAGCATCCCTCCATGGCCTCTGCATCAGCTGCTGCCCTGTTTGAGTTCCTGCCCCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR GCA 90 bp | GGCAGGATCTTGGAGGCTGGAGCTGATGCAGAGGCCATGGAGAGGTaGTGCTTACTGACTTGCTCCTCATGGCTTGCTCAGCCTGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: GRILEAGADAEAMER*CLLTCSSWLAQPAF Trigger: AAAAGCAGGCTGAGCAAGCCATGAGGAGCAAGTCAGTAAGCAGCACCTCTCCATGGCCTCTGCATCAGCTCCAGCCTCCAAGATCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CCA 90 bp | GATGCAGAGGCCATGGAGAGGTGCTGCTTACTGACTTGCTCCTCATaGCTTGCTCAGCCTGCTTTTCTGTACAGAACCCAGGACACCCCC | + |
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Preference number: 1 (lower is better) Translates to: DAEAMERCCLLTCSS*LAQPAFLYRTQDTP Trigger: GGGGGTGTCCTGGGTTCTGTACAGAAAAGCAGGCTGAGCAAGCCATGAGGAGCAAGTCAGTAAGCAGCACCTCTCCATGGCCTCTGCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR TCA 90 bp | GGCTTCTCCTGGCCTCTCACAGTGCCAAGCCTCGGCTGCTCTCCATaGCCCCTTCATGCCTTCAAAACCAGTACTACCTGGGTGACTTTT | + |
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Preference number: 1 (lower is better) Translates to: GFSWPLTVPSLGCSP*PLHAFKTSTTWVTF Trigger: AAAAGTCACCCAGGTAGTACTGGTTTTGAAGGCATGAAGGGGTCATGGAGAGCAGCCGAGGCTTGGCACTGTGAGAGGCCAGGAGAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR GCA 90 bp | GCTGGAGCTGATGCAGAGGCCATGGAGAGGTGCTGCTTACTGACTTaGTCCTCATGGCTTGCTCAGCCTGCTTTTCTGTACAGAACCCAG | + |
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Preference number: 1 (lower is better) Translates to: AGADAEAMERCCLLT*SSWLAQPAFLYRTQ Trigger: CTGGGTTCTGTACAGAAAAGCAGGCTGAGCAAGCCATGAGGAGCAAGTCAGTAAGCAGCACCTCTCCATGGCCTCTGCATCAGCTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR GCA 90 bp | AGGATCTTGGAGGCTGGAGCTGATGCAGAGGCCATGGAGAGGTGCTaGTTACTGACTTGCTCCTCATGGCTTGCTCAGCCTGCTTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: RILEAGADAEAMERC*LLTCSSWLAQPAFL Trigger: CAGAAAAGCAGGCTGAGCAAGCCATGAGGAGCAAGTCAGTAAGCAGCACCTCTCCATGGCCTCTGCATCAGCTCCAGCCTCCAAGATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CCA 90 bp | ATTACTGAAGGAAGTCAGGGCAGGATCTCAGACAGGGCAGGATCTTaGAGGCTGGAGCTGATGCAGAGGCCATGGAGAGGTGCTGCTTAC | + |
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Preference number: 1 (lower is better) Translates to: ITEGSQGRISDRAGS*RLELMQRPWRGAAY Trigger: GTAAGCAGCACCTCTCCATGGCCTCTGCATCAGCTCCAGCCTCCAAGATCCTGCCCTGTCTGAGATCCTGCCCTGACTTCCTTCAGTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR TCA 90 bp | TGGAGGCTGGAGCTGATGCAGAGGCCATGGAGAGGTGCTGCTTACTaGCTTGCTCCTCATGGCTTGCTCAGCCTGCTTTTCTGTACAGAA | + |
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Preference number: 1 (lower is better) Translates to: WRLELMQRPWRGAAY*LAPHGLLSLLFCTE Trigger: TTCTGTACAGAAAAGCAGGCTGAGCAAGCCATGAGGAGCAAGTCAGTAAGCAGCACCTCTCCATGGCCTCTGCATCAGCTCCAGCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CCA 90 bp | GTTCTGTCTTCCGTAGCACACACAGTTTGTCTTCCAGGCACCAGCTaGCTCCACTCCATTGTTGCTGCTGTTCTTGGTGGTCATCACATG | + |
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Preference number: 1 (lower is better) Translates to: VLSSVAHTVCLPGTS*LHSIVAAVLGGHHM Trigger: CATGTGATGACCACCAAGAACAGCAGCAACAATGGAGTGGAGCCAGCTGGTGCCTGGAAGACAAACTGTGTGTGCTACGGAAGACAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR TCA 90 bp | TTAGTCATTGCAGTGGATGTGGGGTTCAAGGGACTCCCAAGACAGTaGAGGCTACTGCCACTGACCTTGTTTGCTTCTGAGAACTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: LVIAVDVGFKGLPRQ*RLLPLTLFASENLE Trigger: CTCCAAGTTCTCAGAAGCAAACAAGGTCAGTGGCAGTAGCCTTCACTGTCTTGGGAGTCCCTTGAACCCCACATCCACTGCAATGACTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR GCA 90 bp | CACAGTTTGTCTTCCAGGCACCAGCTGGCTCCACTCCATTGTTGCTaGTGTTCTTGGTGGTCATCACATGGTACTGGCATCTACAATACA | + |
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Preference number: 1 (lower is better) Translates to: HSLSSRHQLAPLHCC*CSWWSSHGTGIYNT Trigger: TGTATTGTAGATGCCAGTACCATGTGATGACCACCAAGAACAGCAGCAACAATGGAGTGGAGCCAGCTGGTGCCTGGAAGACAAACTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR GCA 90 bp | ACACACAGTTTGTCTTCCAGGCACCAGCTGGCTCCACTCCATTGTTaGTGCTGTTCTTGGTGGTCATCACATGGTACTGGCATCTACAAT | + |
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Preference number: 1 (lower is better) Translates to: THSLSSRHQLAPLHC*CCSWWSSHGTGIYN Trigger: ATTGTAGATGCCAGTACCATGTGATGACCACCAAGAACAGCAGCAACAATGGAGTGGAGCCAGCTGGTGCCTGGAAGACAAACTGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR TCA 90 bp | GAAAGGGCCTATTTCAGCTTATACTTCCAGGTAACAGTCTATTACTaGAGGAAGTCAGGGCAGGATCTCAGACAGGGCAGGATCTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: ERAYFSLYFQVTVYY*RKSGQDLRQGRILE Trigger: CTCCAAGATCCTGCCCTGTCTGAGATCCTGCCCTGACTTCCTTCAGTAATAGACTGTTACCTGGAAGTATAAGCTGAAATAGGCCCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR TCA 90 bp | AAGGCAAAGCCATCCTCTGGTCCAAGTACAGACATTAGGAATTATTaGCCTTTAGCTAAAACTGGTGTGTACAGAAACTATGAGCCACTG | + |
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Preference number: 1 (lower is better) Translates to: KAKPSSGPSTDIRNY*PLAKTGVYRNYEPL Trigger: CAGTGGCTCATAGTTTCTGTACACACCAGTTTTAGCTAAAGGTCAATAATTCCTAATGTCTGTACTTGGACCAGAGGATGGCTTTGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CAA 90 bp | CACAGGGCTCGCTTGTATGGTTCTGTCTTCCGTAGCACACACAGTTaGTCTTCCAGGCACCAGCTGGCTCCACTCCATTGTTGCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: HRARLYGSVFRSTHS*SSRHQLAPLHCCCC Trigger: ACAGCAGCAACAATGGAGTGGAGCCAGCTGGTGCCTGGAAGACAAACTGTGTGTGCTACGGAAGACAGAACCATACAAGCGAGCCCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCTATCAATGAGGGAAGTCGGGGCAGGAACTCAAACAGGGCAGCAGCTGATGCTCGGCTGCTCTCCATaGCCCCTTCATGCCTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: SLSMREVGAGTQTGQQLMLGCSP*PLHAFK Trigger: TTTGAAGGCATGAAGGGGTCATGGAGAGCAGCCGAG...CATCAGCTGCTGCCCTGTTTGAGTTCCTGCCCCGACTTCCCTCATTGATAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCATTGCAGTGGATGTGGGGTTCAAGGGACTCCCAAGACAGTGAAGGCTACTTGGCTGGGGAGATCATaGATCCTGGGGGAAGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: SHCSGCGVQGTPKTVKATWLGRS*ILGEGS Trigger: GGAACCTTCCCCCAGGATTCATGATCTCCCCAGCCA...AGTAGCCTTCACTGTCTTGGGAGTCCCTTGAACCCCACATCCACTGCAATGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCTCCACAGGGCTCGCTTGTATGGTTCTGTCTTCCGTAGCACACACAGTTTGGAGGCCATGGAGAGGTaGTGCTTACTGACTTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: LLHRARLYGSVFRSTHSLEAMER*CLLTCS Trigger: GGAGCAAGTCAGTAAGCAGCACCTCTCCATGGCCTC...CAAACTGTGTGTGCTACGGAAGACAGAACCATACAAGCGAGCCCTGTGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCAATGCCCACTCAGGATCTTCTGGACTCCTCCACAGGGCTCGCTTGTATGGACTGGAGTCTTCTGCTaGAGCTGGGCTGCACTTTCA | + |
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Preference number: 2 (lower is better) Translates to: TQCPLRIFWTPPQGSLVWTGVFC*SWAALS Trigger: TGAAAGTGCAGCCCAGCTGCAGCAGAAGACTCCAGT...CCATACAAGCGAGCCCTGTGGAGGAGTCCAGAAGATCCTGAGTGGGCATTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CAA 90 bp | CTCAATGCCCACTCAGGATCTTCTGGACTCCTCCACAGGGCTCGCTaGTATGGTTCTGTCTTCCGTAGCACACACAGTTTGTCTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LNAHSGSSGLLHRAR*YGSVFRSTHSLSSR Trigger: CCTGGAAGACAAACTGTGTGTGCTACGGAAGACAGAACCATACAAGCGAGCCCTGTGGAGGAGTCCAGAAGATCCTGAGTGGGCATTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGGATCTTCTGGACTCCTCCACAGGGCTCGCTTGTATGGTTCTGTCTTCCGTAACGCTTGGCCACATTaGATCATCCTGCCATTCCGG | + |
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Preference number: 2 (lower is better) Translates to: SGSSGLLHRARLYGSVFRNAWPH*IILPFR Trigger: CCGGAATGGCAGGATGATTCAATGTGGCCAAGCGTT...ACGGAAGACAGAACCATACAAGCGAGCCCTGTGGAGGAGTCCAGAAGATCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGCTAAAACTGGTGTGTACAGAAACTATGAGCCACTGATCCTTCCTCCTGGCCCACCCACAGTGGGCTaGGCCTTCCCCATCAACTGC | + |
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Preference number: 2 (lower is better) Translates to: LAKTGVYRNYEPLILPPGPPTVG*AFPINC Trigger: GCAGTTGATGGGGAAGGCCCAGCCCACTGTGGGTGG...GCCAGGAGGAAGGATCAGTGGCTCATAGTTTCTGTACACACCAGTTTTAGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CAA 90 bp | GTCTTCCAGGCACCAGCTGGCTCCACTCCATTGTTGCTGCTGTTCTaGGTGGTCATCACATGGTACTGGCATCTACAATACACTGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: VFQAPAGSTPLLLLF*VVITWYWHLQYTGV Trigger: GACTCCAGTGTATTGTAGATGCCAGTACCATGTGATGACCACCAAGAACAGCAGCAACAATGGAGTGGAGCCAGCTGGTGCCTGGAAGAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR TCA 90 bp | ACATGGTACTGGCATCTACAATACACTGGAGTCTTCTGCTGCAGCTGGGCTGCATGTGTGTACCAACCCTaGGGCATGTTCCTAGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: TWYWHLQYTGVFCCSWAACVYQP*GMFLEG Trigger: GCCTTCTAGGAACATGCCTCAGGGTTGGTACACACA...TGCAGCCCAGCTGCAGCAGAAGACTCCAGTGTATTGTAGATGCCAGTACCATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCTCCACAGGGCTCGCTTGTATGGTTCTGTCTTCCGTAGCACACACAGTTTGTGCTGCTTACTGACTTaGTCCTCATGGCTTGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LLHRARLYGSVFRSTHSLCCLLT*SSWLAQ Trigger: CTGAGCAAGCCATGAGGAGCAAGTCAGTAAGCAGCA...CAAACTGTGTGTGCTACGGAAGACAGAACCATACAAGCGAGCCCTGTGGAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CAA 90 bp | CACACACAGTTTGTCTTCCAGGCACCAGCTGGCTCCACTCCATTGTaGCTGCTGTTCTTGGTGGTCATCACATGGTACTGGCATCTACAA | + |
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Preference number: 2 (lower is better) Translates to: HTQFVFQAPAGSTPL*LLFLVVITWYWHLQ Trigger: TTGTAGATGCCAGTACCATGTGATGACCACCAAGAACAGCAGCAACAATGGAGTGGAGCCAGCTGGTGCCTGGAAGACAAACTGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGTGGCCCACAGGGGAAACCTCTCTTCTTTAAGTTGTTAGTCATTGCAGTGAGAGGTGCTGCTTACTaGCTTGCTCCTCATGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: PSGPQGKPLFFKLLVIAVRGAAY*LAPHGL Trigger: CAAGCCATGAGGAGCAAGTCAGTAAGCAGCACCTCT...CACTGCAATGACTAACAACTTAAAGAAGAGAGGTTTCCCCTGTGGGCCACTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCATTGCAGTGGATGTGGGGTTCAAGGGACTCCCAAGACAGTGAAGGCTACTAGTGCATGGCCCTCTTaGTCCCAGCTTTTCTGTATG | + |
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Preference number: 2 (lower is better) Translates to: SHCSGCGVQGTPKTVKATSAWPS*SQLFCM Trigger: CATACAGAAAAGCTGGGATCAAGAGGGCCATGCACT...AGTAGCCTTCACTGTCTTGGGAGTCCCTTGAACCCCACATCCACTGCAATGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTATGGTTCTGTCTTCCGTAGCACACACAGTTTGTCTTCCAGGCACCAGCTGTACACTGGAGTCTTCTaGTGCAGCTGGGCTGCACTT | + |
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Preference number: 2 (lower is better) Translates to: LYGSVFRSTHSLSSRHQLYTGVF*CSWAAL Trigger: AAGTGCAGCCCAGCTGCAGCAGAAGACTCCAGTGTA...CAGCTGGTGCCTGGAAGACAAACTGTGTGTGCTACGGAAGACAGAACCATACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR CCA 90 bp | ACATGGTACTGGCATCTACAATACACTGGAGTCTTCTGCTGCAGCTGGGCTGCATTTAGATTGGGGACATaGGAGGAGTTGGAGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: TWYWHLQYTGVFCCSWAAFRLGT*EELEGE Trigger: CTCTCCCTCCAACTCCTCCCATGTCCCCAATCTAAA...TGCAGCCCAGCTGCAGCAGAAGACTCCAGTGTATTGTAGATGCCAGTACCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGTTCTGTCTTCCGTAGCACACACAGTTTGTCTTCCAGGCACCAGCTGGCTCCCAGTACTACCTGGGTaGCTTTTATATTCCCAACCT | + |
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Preference number: 2 (lower is better) Translates to: MVLSSVAHTVCLPGTSWLPVLPG*LLYSQP Trigger: AGGTTGGGAATATAAAAGTCACCCAGGTAGTACTGG...GAGCCAGCTGGTGCCTGGAAGACAAACTGTGTGTGCTACGGAAGACAGAACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGTGGCCCACAGGGGAAACCTCTCTTCTTTAAGTTGTTAGTCATTGCAGTGAACTGTATGTGTGTGTaGTACGCATGGCTGGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: PSGPQGKPLFFKLLVIAVNCMCV*YAWLGR Trigger: TCTCCCCAGCCATGCGTAGCACACACACATACAGTT...CACTGCAATGACTAACAACTTAAAGAAGAGAGGTTTCCCCTGTGGGCCACTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGATCTTCTGGACTCCTCCACAGGGCTCGCTTGTATGGTTCTGTCTTCCGTTGTTGCTGCTGTTCTTaGTGGTCATCACATGGTACT | + |
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Preference number: 2 (lower is better) Translates to: SGSSGLLHRARLYGSVFRCCCCS*WSSHGT Trigger: AGTACCATGTGATGACCACCAAGAACAGCAGCAACA...ACGGAAGACAGAACCATACAAGCGAGCCCTGTGGAGGAGTCCAGAAGATCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCACAGCATTTCCTTTCTTGTCCATCCCCAAGGTCACACATTACATCAACATCTTCCAGGCACCAGCTaGCTCCACTCCATTGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: SHSISFLVHPQGHTLHQHLPGTS*LHSIVA Trigger: AGCAACAATGGAGTGGAGCCAGCTGGTGCCTGGAAG...ATGTTGATGTAATGTGTGACCTTGGGGATGGACAAGAAAGGAAATGCTGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGGATCTTCTGGACTCCTCCACAGGGCTCGCTTGTATGGTTCTGTCTTCCGTCAGAACATAAGGTCATaGAATTTAGATTGGGGACAT | + |
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Preference number: 2 (lower is better) Translates to: SGSSGLLHRARLYGSVFRQNIRS*NLDWGH Trigger: ATGTCCCCAATCTAAATTTCATGACCTTATGTTCTG...ACGGAAGACAGAACCATACAAGCGAGCCCTGTGGAGGAGTCCAGAAGATCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCACAGCATTTCCTTTCTTGTCCATCCCCAAGGTCACACATTACATCAACATCTGACTTGCTCCTCATaGCTTGCTCAGCCTGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: SHSISFLVHPQGHTLHQHLTCSS*LAQPAF Trigger: AAAAGCAGGCTGAGCAAGCCATGAGGAGCAAGTCAG...ATGTTGATGTAATGTGTGACCTTGGGGATGGACAAGAAAGGAAATGCTGTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGCTAAAACTGGTGTGTACAGAAACTATGAGCCACTGATCCTTCCTCCTGGCGTAACAGTCTATTACTaGAGGAAGTCAGGGCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: LAKTGVYRNYEPLILPPGVTVYY*RKSGQD Trigger: ATCCTGCCCTGACTTCCTTCAGTAATAGACTGTTAC...GCCAGGAGGAAGGATCAGTGGCTCATAGTTTCTGTACACACCAGTTTTAGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR TCA 90 bp | ACATGGTACTGGCATCTACAATACACTGGAGTCTTCTGCTGCAGCTGGGCTGCATTCAATTTCTCTTTATaGTCTCTTCAGTCCTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: TWYWHLQYTGVFCCSWAAFNFSL*SLQSWS Trigger: ACTCCAGGACTGAAGAGATCATAAAGAGAAATTGAA...TGCAGCCCAGCTGCAGCAGAAGACTCCAGTGTATTGTAGATGCCAGTACCATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCACAGCATTTCCTTTCTTGTCCATCCCCAAGGTCACACATTACATCAACATATGGCTTGCTCAGCCTaGTTTTCTGTACAGAACCCA | + |
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Preference number: 2 (lower is better) Translates to: SHSISFLVHPQGHTLHQHMACSA*FSVQNP Trigger: TGGGTTCTGTACAGAAAAGCAGGCTGAGCAAGCCAT...ATGTTGATGTAATGTGTGACCTTGGGGATGGACAAGAAAGGAAATGCTGTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCACAGCATTTCCTTTCTTGTCCATCCCCAAGGTCACACATTACATCAACATTTACACAAATGTCCCTaGAGAGTCCTTGCTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: SHSISFLVHPQGHTLHQHLHKCP*RVLASL Trigger: GAGGGAAGCAAGGACTCTGCAGGGACATTTGTGTAA...ATGTTGATGTAATGTGTGACCTTGGGGATGGACAAGAAAGGAAATGCTGTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGCCCTCTTGATCCCAGCTTTTCTGTATGTGTGTGTTCTAGTTAGGGTTACTACCAATAGCCTCTCCTaGACTCTCTTCATGGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: MALLIPAFLYVCVLVRVTTNSLS*TLFMVL Trigger: AAGCACCATGAAGAGAGTCCAGGAGAGGCTATTGGT...AGTAACCCTAACTAGAACACACACATACAGAAAAGCTGGGATCAAGAGGGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTATGGTTCTGTCTTCCGTAGCACACACAGTTTGTCTTCCAGGCACCAGCTGAAAACCAGTACTACCTaGGTGACTTTTATATTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LYGSVFRSTHSLSSRHQLKTSTT*VTFIFP Trigger: TGGGAATATAAAAGTCACCCAGGTAGTACTGGTTTT...CAGCTGGTGCCTGGAAGACAAACTGTGTGTGCTACGGAAGACAGAACCATACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCATTGCAGTGGATGTGGGGTTCAAGGGACTCCCAAGACAGTGAAGGCTACTATGACCAAAGAAACTTaGGGAGAAAGAGTTTATTTC | + |
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Preference number: 2 (lower is better) Translates to: SHCSGCGVQGTPKTVKATMTKET*GERVYF Trigger: GAAATAAACTCTTTCTCCCCAAGTTTCTTTGGTCAT...AGTAGCCTTCACTGTCTTGGGAGTCCCTTGAACCCCACATCCACTGCAATGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CAA 90 bp | TTCTTAATCATAGCCAGTTCTTCAACTCCAGGTAACCAGCATCCATaGTCCCAGCAAAGCAAAGGTCTTACTTTAGTGGTTCTGGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: FLIIASSSTPGNQHP*SQQSKGLTLVVLVS Trigger: AGAGACCAGAACCACTAAAGTAAGACCTTTGCTTTGCTGGGACAATGGATGCTGGTTACCTGGAGTTGAAGAACTGGCTATGATTAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCACAGCATTTCCTTTCTTGTCCATCCCCAAGGTCACACATTACATCAACATTGGATGTTGAAGAAGTaGGAAGAAAGAGTAAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: SHSISFLVHPQGHTLHQHWMLKK*EERVRV Trigger: CACCCTTACTCTTTCTTCTCACTTCTTCAACATCCA...ATGTTGATGTAATGTGTGACCTTGGGGATGGACAAGAAAGGAAATGCTGTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR CAA 90 bp | ATTGTCCCAGCAAAGCAAAGGTCTTACTTTAGTGGTTCTGGTCTCTaGTTAATCACAGCTGATTCTTCAGCTCCAGATGATCAGACCATA | + |
|
Preference number: 2 (lower is better) Translates to: IVPAKQRSYFSGSGL*LITADSSAPDDQTI Trigger: TATGGTCTGATCATCTGGAGCTGAAGAATCAGCTGTGATTAACAAGAGACCAGAACCACTAAAGTAAGACCTTTGCTTTGCTGGGACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGGCCCTCTTGATCCCAGCTTTTCTGTATGTGTGTGTTCTAGTTAGGGTTACTCCTGGACTCTCTTCATaGTGCTTCAATTTCTCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: MALLIPAFLYVCVLVRVTPGLSS*CFNFSL Trigger: TAAAGAGAAATTGAAGCACCATGAAGAGAGTCCAGG...AGTAACCCTAACTAGAACACACACATACAGAAAAGCTGGGATCAAGAGGGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGCAAAGGTCTTACTTTAGTGGTTCTGGTCTCTTGTTAATCACAGCTGATTCTTGGTGGTATGGATGTTaGAGAAGTGAGAAGAAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: KQRSYFSGSGLLLITADSWWYGC*RSEKKE Trigger: CTCTTTCTTCTCACTTCTTCAACATCCATACCACCA...AGAATCAGCTGTGATTAACAAGAGACCAGAACCACTAAAGTAAGACCTTTGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR CAA 90 bp | ACAGAACATAAGGTCATGAAATTTAGATTGGGGACATGGGAGGAGTaGGAGGGAGAGAGGAGAGATAGAAATGATATAAATTCAATATCA | + |
|
Preference number: 2 (lower is better) Translates to: TEHKVMKFRLGTWEE*EGERRDRNDINSIS Trigger: TGATATTGAATTTATATCATTTCTATCTCTCCTCTCTCCCTCCAACTCCTCCCATGTCCCCAATCTAAATTTCATGACCTTATGTTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR GCA 72 bp | GAGGCTGGAGCTGATGCAGAGGCCATGGAGAGGTGCTaGTTACTGACTTGCTCCTCATGGCTTGCTCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: EAGADAEAMERC*LLTCSSWLAQP Trigger: AGGCTGAGCAAGCCATGAGGAGCAAGTCAGTAAGCAGCACCTCTCCATGGCCTCTGCATCAGCTCCAGCCTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR TCA 72 bp | TGGCCTCTCACAGTGCCAAGCCTCGGCTGCTCTCCATaGCCCCTTCATGCCTTCAAAACCAGTACTACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WPLTVPSLGCSP*PLHAFKTSTTW Trigger: CCAGGTAGTACTGGTTTTGAAGGCATGAAGGGGTCATGGAGAGCAGCCGAGGCTTGGCACTGTGAGAGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR GCA 72 bp | CTGCTTACTGACTTGCTCCTCATGGCTTGCTCAGCCTaGTTTTCTGTACAGAACCCAGGACACCCCCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: LLTDLLLMACSA*FSVQNPGHPHP Trigger: GGGGTGGGGGTGTCCTGGGTTCTGTACAGAAAAGCAGGCTGAGCAAGCCATGAGGAGCAAGTCAGTAAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR CCA 72 bp | GGAACTCAAACAGGGCAGCAGCTGATGCAGAGGCCATaGAGGGATGCTGCTTACTGGCTTGTTCCTCATAGC | + |
|
Preference number: 3 (lower is better) Translates to: GTQTGQQLMQRP*RDAAYWLVPHS Trigger: GCTATGAGGAACAAGCCAGTAAGCAGCATCCCTCCATGGCCTCTGCATCAGCTGCTGCCCTGTTTGAGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGTCTTCTGCTGCAGCTGGGCTGCACTTTCACCAATAGCCTCTCCTGGACTCAAACGCTTGGCCACATaGAATCATCCTGCCATTCCG | + |
|
Preference number: 3 (lower is better) Translates to: GVFCCSWAALSPIASPGLKRLAT*NHPAIP Trigger: CGGAATGGCAGGATGATTCAATGTGGCCAAGCGTTT...GAGTCCAGGAGAGGCTATTGGTGAAAGTGCAGCCCAGCTGCAGCAGAAGACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCACAGTGCCAAGCCTCGGCTGCTCTCCATGACCCCTTCATGCCTTCAAAACTTGCTCCTCATGGCTaGCTCAGCCTGCTTTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSQCQASAALHDPFMPSKLAPHG*LSLLFC Trigger: ACAGAAAAGCAGGCTGAGCAAGCCATGAGGAGCAAG...TTTTGAAGGCATGAAGGGGTCATGGAGAGCAGCCGAGGCTTGGCACTGTGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTCCACAGGGCTCGCTTGTATGGTTCTGTCTTCCGTAGCACACACAGTTTGGGCTCCACTCCATTGTaGCTGCTGTTCTTGGTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LLHRARLYGSVFRSTHSLGSTPL*LLFLVV Trigger: GACCACCAAGAACAGCAGCAACAATGGAGTGGAGCC...CAAACTGTGTGTGCTACGGAAGACAGAACCATACAAGCGAGCCCTGTGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR TCA 72 bp | GCAGTGGATGTGGGGTTCAAGGGACTCCCAAGACAGTaGAGGCTACTGCCACTGACCTTGTTTGCTTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: AVDVGFKGLPRQ*RLLPLTLFASE Trigger: CTCAGAAGCAAACAAGGTCAGTGGCAGTAGCCTTCACTGTCTTGGGAGTCCCTTGAACCCCACATCCACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR GCA 72 bp | GGAGAGGTGCTGCTTACTGACTTGCTCCTCATGGCTTaGTCAGCCTGCTTTTCTGTACAGAACCCAGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: GEVLLTDLLLMA*SACFSVQNPGH Trigger: GTGTCCTGGGTTCTGTACAGAAAAGCAGGCTGAGCAAGCCATGAGGAGCAAGTCAGTAAGCAGCACCTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR GCA 72 bp | GATGCAGAGGCCATGGAGAGGTGCTGCTTACTGACTTaGTCCTCATGGCTTGCTCAGCCTGCTTTTCTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: DAEAMERCCLLT*SSWLAQPAFLY Trigger: GTACAGAAAAGCAGGCTGAGCAAGCCATGAGGAGCAAGTCAGTAAGCAGCACCTCTCCATGGCCTCTGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR GCA 72 bp | TCTTCCAGGCACCAGCTGGCTCCACTCCATTGTTGCTaGTGTTCTTGGTGGTCATCACATGGTACTGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: SSRHQLAPLHCC*CSWWSSHGTGI Trigger: GATGCCAGTACCATGTGATGACCACCAAGAACAGCAGCAACAATGGAGTGGAGCCAGCTGGTGCCTGGAAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR GCA 72 bp | TTGTCTTCCAGGCACCAGCTGGCTCCACTCCATTGTTaGTGCTGTTCTTGGTGGTCATCACATGGTACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LSSRHQLAPLHC*CCSWWSSHGTG Trigger: GCCAGTACCATGTGATGACCACCAAGAACAGCAGCAACAATGGAGTGGAGCCAGCTGGTGCCTGGAAGACAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR CCA 72 bp | GCCATGGAGAGGTGCTGCTTACTGACTTGCTCCTCATaGCTTGCTCAGCCTGCTTTTCTGTACAGAACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: AMERCCLLTCSS*LAQPAFLYRTQ Trigger: CTGGGTTCTGTACAGAAAAGCAGGCTGAGCAAGCCATGAGGAGCAAGTCAGTAAGCAGCACCTCTCCATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR CCA 72 bp | TCCGTAGCACACACAGTTTGTCTTCCAGGCACCAGCTaGCTCCACTCCATTGTTGCTGCTGTTCTTGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SVAHTVCLPGTS*LHSIVAAVLGG Trigger: ACCACCAAGAACAGCAGCAACAATGGAGTGGAGCCAGCTGGTGCCTGGAAGACAAACTGTGTGTGCTACGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATGGTACTGGCATCTACAATACACTGGAGTCTTCTGCTGCAGCTGGGCTGCACCTCTGGAACACAGCTaGTGTGTACCAACCCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TWYWHLQYTGVFCCSWAAPLEHS*CVPTLR Trigger: CCTCAGGGTTGGTACACACAAGCTGTGTTCCAGAGG...TGCAGCCCAGCTGCAGCAGAAGACTCCAGTGTATTGTAGATGCCAGTACCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR CCA 72 bp | GGAGGTAAGACCTTACCACTGAGGACACCACATACTTaGGACAGAAGACTCAGAGGAGCTGACCTGGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: GGKTLPLRTPHT*DRRLRGADLEL Trigger: CAGTTCCAGGTCAGCTCCTCTGAGTCTTCTGTCCCAAGTATGTGGTGTCCTCAGTGGTAAGGTCTTACCTCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGCTCCTCATGGCTTGCTCAGCCTGCTTTTCTGTACAGAACCCAGGACACCCGTCATGAAATTTAGATaGGGGACATGGGAGGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LAPHGLLSLLFCTEPRTPVMKFR*GTWEEL Trigger: CAACTCCTCCCATGTCCCCAATCTAAATTTCATGAC...GGGTGTCCTGGGTTCTGTACAGAAAAGCAGGCTGAGCAAGCCATGAGGAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGTTCTGTCTTCCGTAGCACACACAGTTTGTCTTCCAGGCACCAGCTGGCTCTTTATATTCCCAACCTaGGCTGCCTCTGGAACACAG | + |
|
Preference number: 3 (lower is better) Translates to: MVLSSVAHTVCLPGTSWLFIFPT*AASGTQ Trigger: CTGTGTTCCAGAGGCAGCCAAGGTTGGGAATATAAA...GAGCCAGCTGGTGCCTGGAAGACAAACTGTGTGTGCTACGGAAGACAGAACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTATCAATGAGGGAAGTCGGGGCAGGAACTCAAACAGGGCAGCAGCTGATGACAGCATTTCCTTTCTaGTCCATCCCCAAGGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: SLSMREVGAGTQTGQQLMTAFPF*SIPKVT Trigger: TGTGACCTTGGGGATGGACAAGAAAGGAAATGCTGT...CATCAGCTGCTGCCCTGTTTGAGTTCCTGCCCCGACTTCCCTCATTGATAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR GCA 72 bp | TCTACAATACACTGGAGTCTTCTGCTGCAGCTGGGCTaGACTTTCACCAATAGCCTCTCCTGGACTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: STIHWSLLLQLG*TFTNSLSWTLF Trigger: GAAGAGAGTCCAGGAGAGGCTATTGGTGAAAGTGCAGCCCAGCTGCAGCAGAAGACTCCAGTGTATTGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGTCCTGGAGTTTCAACTGATACTGAGGCTGCACCTTCACCAATGGCTTCTGTGCTGCTTACTGACTaGCTCCTCATGGCTTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: FSPGVSTDTEAAPSPMASVLLTD*LLMACS Trigger: TGAGCAAGCCATGAGGAGCAAGTCAGTAAGCAGCAC...AGAAGCCATTGGTGAAGGTGCAGCCTCAGTATCAGTTGAAACTCCAGGACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR TCA 72 bp | TTACACAAATGTCCCTGCAGAGTCCTTGCTTCCCTCTaGAACTCCAGAAGCTGGGTGTCTGTCTTCTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: LHKCPCRVLASL*NSRSWVSVFCT Trigger: AGTGCAGAAGACAGACACCCAGCTTCTGGAGTTTCAGAGGGAAGCAAGGACTCTGCAGGGACATTTGTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR GCA 72 bp | ACATGGTACTGGCATCTACAATACACTGGAGTCTTCTaGTGCAGCTGGGCTGCACTTTCACCAATAGCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TWYWHLQYTGVF*CSWAALSPIAS Trigger: AGAGGCTATTGGTGAAAGTGCAGCCCAGCTGCAGCAGAAGACTCCAGTGTATTGTAGATGCCAGTACCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR CCA 72 bp | CAGCTGGCTCCACTCCATTGTTGCTGCTGTTCTTGGTaGTCATCACATGGTACTGGCATCTACAATACACTG | + |
|
Preference number: 3 (lower is better) Translates to: QLAPLHCCCCSW*SSHGTGIYNTL Trigger: CAGTGTATTGTAGATGCCAGTACCATGTGATGACCACCAAGAACAGCAGCAACAATGGAGTGGAGCCAGCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR CCA 72 bp | CACCAGCTGGCTCCACTCCATTGTTGCTGCTGTTCTTaGTGGTCATCACATGGTACTGGCATCTACAATACA | + |
|
Preference number: 3 (lower is better) Translates to: HQLAPLHCCCCS*WSSHGTGIYNT Trigger: TGTATTGTAGATGCCAGTACCATGTGATGACCACCAAGAACAGCAGCAACAATGGAGTGGAGCCAGCTGGTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTATCAATGAGGGAAGTCGGGGCAGGAACTCAAACAGGGCAGCAGCTGATGAGTGGTTCTGGTCTCTaGTTAATCACAGCTGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: SLSMREVGAGTQTGQQLMSGSGL*LITADS Trigger: AGAATCAGCTGTGATTAACAAGAGACCAGAACCACT...CATCAGCTGCTGCCCTGTTTGAGTTCCTGCCCCGACTTCCCTCATTGATAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCACAGCATTTCCTTTCTTGTCCATCCCCAAGGTCACACATTACATCAACATCGTAGCACACACAGTTaGTCTTCCAGGCACCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SHSISFLVHPQGHTLHQHRSTHS*SSRHQL Trigger: CAGCTGGTGCCTGGAAGACAAACTGTGTGTGCTACG...ATGTTGATGTAATGTGTGACCTTGGGGATGGACAAGAAAGGAAATGCTGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR GCA 72 bp | CATACACTCTTTACACAAATGTCCCTGCAGAGTCCTTaGTTCCCTCTGAAACTCCAGAAGCTGGGTGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HTLFTQMSLQSP*FPLKLQKLGVC Trigger: ACAGACACCCAGCTTCTGGAGTTTCAGAGGGAAGCAAGGACTCTGCAGGGACATTTGTGTAAAGAGTGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR CCA 72 bp | CTGCAGCTGGGCTGCACTTTCACCAATAGCCTCTCCTaGACTCTCTTCATGGTGCTTCAATTTCTCTTTATG | + |
|
Preference number: 3 (lower is better) Translates to: LQLGCTFTNSLS*TLFMVLQFLFM Trigger: CATAAAGAGAAATTGAAGCACCATGAAGAGAGTCCAGGAGAGGCTATTGGTGAAAGTGCAGCCCAGCTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR TCA 72 bp | CAGAGAAAAGTGCAGAAATCCACTATGAGGAACAGATaGAGGGACATGATCATGTCCGTGTCCCAGACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: QRKVQKSTMRNR*RDMIMSVSQTH Trigger: ATGGGTCTGGGACACGGACATGATCATGTCCCTTCATCTGTTCCTCATAGTGGATTTCTGCACTTTTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR TCA 72 bp | TTTGCTTCTGAGAACTTGGAGGTAAGACCTTACCACTaGGGACACCACATACTTGGGACAGAAGACTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FASENLEVRPYH*GHHILGTEDSE Trigger: CTCTGAGTCTTCTGTCCCAAGTATGTGGTGTCCTCAGTGGTAAGGTCTTACCTCCAAGTTCTCAGAAGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR CCA 72 bp | ACTCCATTGTTGCTGCTGTTCTTGGTGGTCATCACATaGTACTGGCATCTACAATACACTGGAGTCTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TPLLLLFLVVIT*YWHLQYTGVFC Trigger: GCAGAAGACTCCAGTGTATTGTAGATGCCAGTACCATGTGATGACCACCAAGAACAGCAGCAACAATGGAGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCAAAGGTCTTACTTTAGTGGTTCTGGTCTCTTGTTAATCACAGCTGATTCTGTCCCTGCAGAGTCCTaGCTTCCCTCTGAAACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: KQRSYFSGSGLLLITADSVPAES*LPSETP Trigger: TGGAGTTTCAGAGGGAAGCAAGGACTCTGCAGGGAC...AGAATCAGCTGTGATTAACAAGAGACCAGAACCACTAAAGTAAGACCTTTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR TCA 72 bp | TATTTCACCTTATACTTCCAGATAACAGTCTATCAATaGGGGAAGTCGGGGCAGGAACTCAAACAGGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: YFTLYFQITVYQ*GKSGQELKQGS Trigger: GCTGCCCTGTTTGAGTTCCTGCCCCGACTTCCCTCATTGATAGACTGTTATCTGGAAGTATAAGGTGAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTCCACAGGGCTCGCTTGTATGGTTCTGTCTTCCGTAGCACACACAGTTTGATGGGCGTGTGGAGGTaGGAGTCAGCCGTGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: LLHRARLYGSVFRSTHSLMGVWR*ESAVIT Trigger: GGTGATCACGGCTGACTCCCACCTCCACACGCCCAT...CAAACTGTGTGTGCTACGGAAGACAGAACCATACAAGCGAGCCCTGTGGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTCCACAGGGCTCGCTTGTATGGTTCTGTCTTCCGTAGCACACACAGTTTGACAGGACCACGGCTATaGGGTGAGAAGAGCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLHRARLYGSVFRSTHSLTGPRL*GEKSRC Trigger: ACACCTGCTCTTCTCACCTCATAGCCGTGGTCCTGT...CAAACTGTGTGTGCTACGGAAGACAGAACCATACAAGCGAGCCCTGTGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGATCTTCTGGACTCCTCCACAGGGCTCGCTTGTATGGTTCTGTCTTCCGTGTGACTGCGCTGTACTaGAAGGAAGAGAGCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGSSGLLHRARLYGSVFRVTALY*KEESKS Trigger: GGACTTGCTCTCTTCCTTGCAGTACAGCGCAGTCAC...ACGGAAGACAGAACCATACAAGCGAGCCCTGTGGAGGAGTCCAGAAGATCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR CAA 72 bp | TTTGTCTTCCAGGCACCAGCTGGCTCCACTCCATTGTaGCTGCTGTTCTTGGTGGTCATCACATGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: FVFQAPAGSTPL*LLFLVVITWYW Trigger: CCAGTACCATGTGATGACCACCAAGAACAGCAGCAACAATGGAGTGGAGCCAGCTGGTGCCTGGAAGACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR CAA 72 bp | CAGTTTGTCTTCCAGGCACCAGCTGGCTCCACTCCATaGTTGCTGCTGTTCTTGGTGGTCATCACATGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QFVFQAPAGSTP*LLLFLVVITWY Trigger: GTACCATGTGATGACCACCAAGAACAGCAGCAACAATGGAGTGGAGCCAGCTGGTGCCTGGAAGACAAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR CAA 72 bp | CGCTTGTATGGTTCTGTCTTCCGTAGCACACACAGTTaGTCTTCCAGGCACCAGCTGGCTCCACTCCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLYGSVFRSTHS*SSRHQLAPLHC Trigger: ACAATGGAGTGGAGCCAGCTGGTGCCTGGAAGACAAACTGTGTGTGCTACGGAAGACAGAACCATACAAGCG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| 3UTR CAA 72 bp | CACTCAGGATCTTCTGGACTCCTCCACAGGGCTCGCTaGTATGGTTCTGTCTTCCGTAGCACACACAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSGSSGLLHRAR*YGSVFRSTHSL Trigger: CAAACTGTGTGTGCTACGGAAGACAGAACCATACAAGCGAGCCCTGTGGAGGAGTCCAGAAGATCCTGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| CDS-3UTR TCA 90 bp | TTGTATGGTTCTGTCTTCCGTAGCACACACAGTTTGTCTTCCAGGCACCAGCTGGAGCACAATGACTACTaGACTGAGAGAGGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LYGSVFRSTHSLSSRHQLEHNDY*TERGQA Trigger: GGCCTGGCCTCTCTCAGTTCAGTAGTCATTGTGCTC...CAGCTGGTGCCTGGAAGACAAACTGTGTGTGCTACGGAAGACAGAACCATACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTCTTCTGCTGCAGCTGGGCTGCACTTTCACCAATAGCCTCTCCTGGACTCATAAGAAAAGAAGATTaGGAGAAAGGTCCCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GVFCCSWAALSPIASPGLIRKED*EKGPQP Trigger: GGGCTGGGGACCTTTCTCCCAATCTTCTTTTCTTAT...GAGTCCAGGAGAGGCTATTGGTGAAAGTGCAGCCCAGCTGCAGCAGAAGACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| CDS-3UTR TCA 90 bp | TGTACAGAACCCAGGACACCCCCACCCCCACTAATAGTAACTACAGAACATAAGAGAGGCCAGGCCCCATaGGAGCAAAACCAACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CTEPRTPPPPLIVTTEHKRGQAP*EQNQLQ Trigger: CTGAAGTTGGTTTTGCTCTCATGGGGCCTGGCCTCT...CTTATGTTCTGTAGTTACTATTAGTGGGGGTGGGGGTGTCCTGGGTTCTGTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
||
| CDS-3UTR TCA 90 bp | ACATGGTACTGGCATCTACAATACACTGGAGTCTTCTGCTGCAGCTGGGCTGCAACCACGGCTATGAGGTaGGAAGAGCAGGTGTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TWYWHLQYTGVFCCSWAATTAMR*EEQVLN Trigger: GTTTAACACCTGCTCTTCTCACCTCATAGCCGTGGT...TGCAGCCCAGCTGCAGCAGAAGACTCCAGTGTATTGTAGATGCCAGTACCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CAA 72 bp | GCACCAGCTGGCTCCACTCCATTGTTGCTGCTGTTCTaGGTGGTCATCACATGGTACTGGCATCTACAATAC | + |
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Preference number: 4 (lower is better) Translates to: APAGSTPLLLLF*VVITWYWHLQY Trigger: GTATTGTAGATGCCAGTACCATGTGATGACCACCAAGAACAGCAGCAACAATGGAGTGGAGCCAGCTGGTGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CAA 72 bp | CCATACACTCTTTACACAAATGTCCCTGCAGAGTCCTaGCTTCCCTCTGAAACTCCAGAAGCTGGGTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: PYTLYTNVPAES*LPSETPEAGCL Trigger: CAGACACCCAGCTTCTGGAGTTTCAGAGGGAAGCAAGGACTCTGCAGGGACATTTGTGTAAAGAGTGTATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CAA 72 bp | TTATATTCCCAACCTTGGCTGCCTCTGGAACACAGCTaGTGTGTACCAACCCTGAGGCATGTTCCTAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LYSQPWLPLEHS*CVPTLRHVPRR Trigger: CCTTCTAGGAACATGCCTCAGGGTTGGTACACACAAGCTGTGTTCCAGAGGCAGCCAAGGTTGGGAATATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| CDS-3UTR TCA 90 bp | ATGGTTCTGTCTTCCGTAGCACACACAGTTTGTCTTCCAGGCACCAGCTGGCTCGTTGATGGAGATATCTaGGCAAGACAAAGGAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: MVLSSVAHTVCLPGTSWLVDGDI*ARQRKE Trigger: CTCTTTCCTTTGTCTTGCTCAGATATCTCCATCAAC...GAGCCAGCTGGTGCCTGGAAGACAAACTGTGTGTGCTACGGAAGACAGAACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CAA 72 bp | ACCAGTACTACCTGGGTGACTTTTATATTCCCAACCTaGGCTGCCTCTGGAACACAGCTTGTGTGTACCAAC | + |
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Preference number: 4 (lower is better) Translates to: TSTTWVTFIFPT*AASGTQLVCTN Trigger: GTTGGTACACACAAGCTGTGTTCCAGAGGCAGCCAAGGTTGGGAATATAAAAGTCACCCAGGTAGTACTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CAA 72 bp | GCTGCTGGCATATCTCCATCAAAGTGCATGGCCCTCTaGATCCCAGCTTTTCTGTATGTGTGTGTTCTAGTT | + |
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Preference number: 4 (lower is better) Translates to: AAGISPSKCMAL*IPAFLYVCVLV Trigger: AACTAGAACACACACATACAGAAAAGCTGGGATCAAGAGGGCCATGCACTTTGATGGAGATATGCCAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CAA 72 bp | CAAGCACATCACTGTTCAGCCACAGCATTTCCTTTCTaGTCCATCCCCAAGGTCACACATTACATCAACATT | + |
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Preference number: 4 (lower is better) Translates to: QAHHCSATAFPF*SIPKVTHYINI Trigger: AATGTTGATGTAATGTGTGACCTTGGGGATGGACAAGAAAGGAAATGCTGTGGCTGAACAGTGATGTGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CAA 72 bp | GGTTACTATTGCTCTGATGAAACACCACGACTAAACTaGGGGAGAAAGGGCCTATTTCAGCTTATACTTCCA | + |
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Preference number: 4 (lower is better) Translates to: GYYCSDETPRLN*GRKGLFQLILP Trigger: TGGAAGTATAAGCTGAAATAGGCCCTTTCTCCCCAAGTTTAGTCGTGGTGTTTCATCAGAGCAATAGTAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CAA 72 bp | GCAAAGCAAAGGTCTTACTTTAGTGGTTCTGGTCTCTaGTTAATCACAGCTGATTCTTCAGCTCCAGATGAT | + |
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Preference number: 4 (lower is better) Translates to: AKQRSYFSGSGL*LITADSSAPDD Trigger: ATCATCTGGAGCTGAAGAATCAGCTGTGATTAACAAGAGACCAGAACCACTAAAGTAAGACCTTTGCTTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| CDS-3UTR GCA 90 bp | AAGCAAAGGTCTTACTTTAGTGGTTCTGGTCTCTTGTTAATCACAGCTGATTCTGCACGGTGGATACAATaGGGGCATAAGAAAAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: KQRSYFSGSGLLLITADSARWIQ*GHKKRR Trigger: TCTTCTTTTCTTATGCCCGCATTGTATCCACCGTGC...AGAATCAGCTGTGATTAACAAGAGACCAGAACCACTAAAGTAAGACCTTTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CAA 72 bp | AAGGTCATGAAATTTAGATTGGGGACATGGGAGGAGTaGGAGGGAGAGAGGAGAGATAGAAATGATATAAAT | + |
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Preference number: 4 (lower is better) Translates to: KVMKFRLGTWEE*EGERRDRNDIN Trigger: ATTTATATCATTTCTATCTCTCCTCTCTCCCTCCAACTCCTCCCATGTCCCCAATCTAAATTTCATGACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| 3UTR CAA 72 bp | TCTTGTCCATCCCCAAGGTCACACATTACATCAACATaGACGGGAATATTACACAATTTTAAAGCCTTTAAA | + |
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Preference number: 4 (lower is better) Translates to: SCPSPRSHITST*TGILHNFKAFK Trigger: TTTAAAGGCTTTAAAATTGTGTAATATTCCCGTCAATGTTGATGTAATGTGTGACCTTGGGGATGGACAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| CDS-3UTR CAA 90 bp | CTCTCACAGTGCCAAGCCTCGGCTGCTCTCCATGACCCCTTCATGCCTTCAAAACAGGTGTTAAACGCCTaGCTTCTCCCCGTGGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: LSQCQASAALHDPFMPSKQVLNA*LLPVVD Trigger: ATCCACCACGGGGAGAAGCAAGGCGTTTAACACCTG...TTTTGAAGGCATGAAGGGGTCATGGAGAGCAGCCGAGGCTTGGCACTGTGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| CDS CCA 90 bp | CATGCTCAGCACGGTGGATACAATGCGGGCATAAGAAAAGAAGATTaGGAGAAAGGTCCCCAGCCCGTGCAGCAGGGTAGAGCAGATCAA | + |
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Preference number: 5 (lower is better) Translates to: HAQHGGYNAGIRKED*EKGPQPVQQGRADQ Trigger: TTGATCTGCTCTACCCTGCTGCACGGGCTGGGGACCTTTCTCCCAATCTTCTTTTCTTATGCCCGCATTGTATCCACCGTGCTGAGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109163.4 ENSMUST00000217517.2 |
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| CDS CCA 90 bp | AAGACAAAGGAAAGAGAGAGGGTAACTCACACGTGTAGTGGTGTATaGTGTAGGCCTCGCAGAAGTCCAGGTTCACCGCCAAGAGCACAA | + |
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Preference number: 5 (lower is better) Translates to: KTKERERVTHTCSGV*CRPRRSPGSPPRAQ Trigger: TTGTGCTCTTGGCGGTGAACCTGGACTTCTGCGAGGCCTACACCATACACCACTACACGTGTGAGTTACCCTCTCTCTTTCCTTTGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109163.4 ENSMUST00000217517.2 |
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| CDS-3UTR CAA 90 bp | CCCAGTGGCCCACAGGGGAAACCTCTCTTCTTTAAGTTGTTAGTCATTGCAGTGCATAAGAAAAGAAGATaGGGAGAAAGGTCCCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: PSGPQGKPLFFKLLVIAVHKKRR*GERSPA Trigger: GGCTGGGGACCTTTCTCCCAATCTTCTTTTCTTATG...CACTGCAATGACTAACAACTTAAAGAAGAGAGGTTTCCCCTGTGGGCCACTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| CDS-3UTR CAA 90 bp | AGCCACAGCATTTCCTTTCTTGTCCATCCCCAAGGTCACACATTACATCAACATGGTCGTACGCCATCATaGACAGAAGAAAGGCTTCGG | + |
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Preference number: 5 (lower is better) Translates to: SHSISFLVHPQGHTLHQHGRTPS*TEERLR Trigger: CCGAAGCCTTTCTTCTGTCAATGATGGCGTACGACC...ATGTTGATGTAATGTGTGACCTTGGGGATGGACAAGAAAGGAAATGCTGTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217517.2 |
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| CDS CCA 72 bp | CACGGTGGATACAATGCGGGCATAAGAAAAGAAGATTaGGAGAAAGGTCCCCAGCCCGTGCAGCAGGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: HGGYNAGIRKED*EKGPQPVQQGR Trigger: TCTACCCTGCTGCACGGGCTGGGGACCTTTCTCCCAATCTTCTTTTCTTATGCCCGCATTGTATCCACCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109163.4 ENSMUST00000217517.2 |
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| CDS CAA 90 bp | GTCCCCAGCCCGTGCAGCAGGGTAGAGCAGATCAAGATGTCCACGTaGATGGAGATATCTGAGCAAGACAAAGGAAAGAGAGAGGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: VPSPCSRVEQIKMST*MEISEQDKGKREGN Trigger: GTTACCCTCTCTCTTTCCTTTGTCTTGCTCAGATATCTCCATCAACGTGGACATCTTGATCTGCTCTACCCTGCTGCACGGGCTGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109163.4 ENSMUST00000217517.2 |
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| CDS GCA 72 bp | CCCATGAGAGCAAAACCAACTTCAGACAGAGTTCGTTaGTCATCATCTGCCCATAGAGTAGCGGGTGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: PMRAKPTSDRVR*SSSAHRVAGGR Trigger: TCTGCCACCCGCTACTCTATGGGCAGATGATGAGCAACGAACTCTGTCTGAAGTTGGTTTTGCTCTCATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109163.4 ENSMUST00000217517.2 |
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| CDS GCA 72 bp | CCGTGGTGGATTCCATGCTCAGCACGGTGGATACAATaGGGGCATAAGAAAAGAAGATTGGGAGAAAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: PWWIPCSARWIQ*GHKKRRLGERS Trigger: GGACCTTTCTCCCAATCTTCTTTTCTTATGCCCGCATTGTATCCACCGTGCTGAGCATGGAATCCACCACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109163.4 ENSMUST00000217517.2 |
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