Pregenerated sensors for OLFR272 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051593Ensembl transcript IDs: ENSMUST00000051600.3, ENSMUST00000107667.3, ENSMUST00000213989.2
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GTACAATTAATATTCACCTCACCTACTCATCAACAGTGCACCTACTACAGATTACTTCCCAGCATGTTCTaGACAGCAGCCTTCACATCC | + |
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Preference number: 4 (lower is better) Translates to: VQLIFTSPTHQQCTYYRLLPSMF*TAAFTS Trigger: GGATGTGAAGGCTGCTGTTCAGAACATGCTGGGAAG...TAATCTGTAGTAGGTGCACTGTTGATGAGTAGGTGAGGTGAATATTAATTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS-3UTR GCA 90 bp | TCACCTCACCTACTCATCAACAGTGCACCTACTACAGATTATAAAGTGCTTTTGAAGCCAGTTCCAGAATaGCCAGAATTTCGCAGACGA | + |
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Preference number: 4 (lower is better) Translates to: SPHLLINSAPTTDYKVLLKPVPE*PEFRRR Trigger: TCGTCTGCGAAATTCTGGGCATTCTGGAACTGGCTT...CAAAAGCACTTTATAATCTGTAGTAGGTGCACTGTTGATGAGTAGGTGAGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS-3UTR TCA 90 bp | TCACCTCACCTACTCATCAACAGTGCACCTACTACAGATTATAAAGTGCTTTTGTCGCAGACGAAGTGGTaGATGACATTATTAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SPHLLINSAPTTDYKVLLSQTKW*MTLLVQ Trigger: CTGCACTAATAATGTCATTCACCACTTCGTCTGCGA...CAAAAGCACTTTATAATCTGTAGTAGGTGCACTGTTGATGAGTAGGTGAGGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS-3UTR GCA 90 bp | TGTGGCATTTCGATCTTTAAGAGCTTTGCATCTATAACAACTTCAAGTAGACAGAAGCCAGTTCCAGAATaGCCAGAATTTCGCAGACGA | + |
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Preference number: 4 (lower is better) Translates to: CGISIFKSFASITTSSRQKPVPE*PEFRRR Trigger: TCGTCTGCGAAATTCTGGGCATTCTGGAACTGGCTT...CTGTCTACTTGAAGTTGTTATAGATGCAAAGCTCTTAAAGATCGAAATGCCACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS-3UTR TCA 90 bp | TGTGGCATTTCGATCTTTAAGAGCTTTGCATCTATAACAACTTCAAGTAGACAGTCGCAGACGAAGTGGTaGATGACATTATTAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: CGISIFKSFASITTSSRQSQTKW*MTLLVQ Trigger: CTGCACTAATAATGTCATTCACCACTTCGTCTGCGA...CTGTCTACTTGAAGTTGTTATAGATGCAAAGCTCTTAAAGATCGAAATGCCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS-3UTR CCA 90 bp | TGTGGCATTTCGATCTTTAAGAGCTTTGCATCTATAACAACTTCAAGTAGACAGTGGGCTTTGCGTACATaGAGAAGATGGTTCCATAGA | + |
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Preference number: 4 (lower is better) Translates to: CGISIFKSFASITTSSRQWALRT*RRWFHR Trigger: TCTATGGAACCATCTTCTCCATGTACGCAAAGCCCA...CTGTCTACTTGAAGTTGTTATAGATGCAAAGCTCTTAAAGATCGAAATGCCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS-3UTR TCA 90 bp | TCACCTCACCTACTCATCAACAGTGCACCTACTACAGATTATAAAGTGCTTTTGAAGGAGAAGAACATTTaGATCATACACTCAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SPHLLINSAPTTDYKVLLKEKNI*IIHSEK Trigger: CTTCTCTGAGTGTATGATTCAAATGTTCTTCTCCTT...CAAAAGCACTTTATAATCTGTAGTAGGTGCACTGTTGATGAGTAGGTGAGGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS-3UTR CCA 90 bp | TGTGGCATTTCGATCTTTAAGAGCTTTGCATCTATAACAACTTCAAGTAGACAGATTCTGTGGCACCCATaGCAAAGGAGAAGAACATTT | + |
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Preference number: 4 (lower is better) Translates to: CGISIFKSFASITTSSRQILWHP*QRRRTF Trigger: AAATGTTCTTCTCCTTTGCCATGGGTGCCACAGAAT...CTGTCTACTTGAAGTTGTTATAGATGCAAAGCTCTTAAAGATCGAAATGCCACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS-3UTR CCA 90 bp | GTACAATTAATATTCACCTCACCTACTCATCAACAGTGCACCTACTACAGATTAATTCTGTGGCACCCATaGCAAAGGAGAAGAACATTT | + |
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Preference number: 4 (lower is better) Translates to: VQLIFTSPTHQQCTYYRLILWHP*QRRRTF Trigger: AAATGTTCTTCTCCTTTGCCATGGGTGCCACAGAAT...TAATCTGTAGTAGGTGCACTGTTGATGAGTAGGTGAGGTGAATATTAATTGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS-3UTR TCA 90 bp | TGTGGCATTTCGATCTTTAAGAGCTTTGCATCTATAACAACTTCAAGTAGACAGAAGGAGAAGAACATTTaGATCATACACTCAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CGISIFKSFASITTSSRQKEKNI*IIHSEK Trigger: CTTCTCTGAGTGTATGATTCAAATGTTCTTCTCCTT...CTGTCTACTTGAAGTTGTTATAGATGCAAAGCTCTTAAAGATCGAAATGCCACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS-3UTR GCA 90 bp | GTACAATTAATATTCACCTCACCTACTCATCAACAGTGCACCTACTACAGATTAGGATCATCAGATACATaGACAAAACTAGCACAAATA | + |
|
Preference number: 4 (lower is better) Translates to: VQLIFTSPTHQQCTYYRLGSSDT*TKLAQI Trigger: TATTTGTGCTAGTTTTGTGCATGTATCTGATGATCC...TAATCTGTAGTAGGTGCACTGTTGATGAGTAGGTGAGGTGAATATTAATTGTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS-3UTR GCA 90 bp | TGTGGCATTTCGATCTTTAAGAGCTTTGCATCTATAACAACTTCAAGTAGACAGGGATCATCAGATACATaGACAAAACTAGCACAAATA | + |
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Preference number: 4 (lower is better) Translates to: CGISIFKSFASITTSSRQGSSDT*TKLAQI Trigger: TATTTGTGCTAGTTTTGTGCATGTATCTGATGATCC...CTGTCTACTTGAAGTTGTTATAGATGCAAAGCTCTTAAAGATCGAAATGCCACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS-3UTR CAA 90 bp | TGTGGCATTTCGATCTTTAAGAGCTTTGCATCTATAACAACTTCAAGTAGACAGGGCCTCCATCACGCTTaGATGGCCTGCCCCAGCGGT | + |
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Preference number: 5 (lower is better) Translates to: CGISIFKSFASITTSSRQGLHHA*MACPSG Trigger: ACCGCTGGGGCAGGCCATCAAAGCGTGATGGAGGCC...CTGTCTACTTGAAGTTGTTATAGATGCAAAGCTCTTAAAGATCGAAATGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS-3UTR CAA 90 bp | TCACCTCACCTACTCATCAACAGTGCACCTACTACAGATTATAAAGTGCTTTTGGCGGTGTCTTTAGACTaGGGCTTTGCGTACATGGAG | + |
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Preference number: 5 (lower is better) Translates to: SPHLLINSAPTTDYKVLLAVSLD*GFAYME Trigger: CTCCATGTACGCAAAGCCCAAGTCTAAAGACACCGC...CAAAAGCACTTTATAATCTGTAGTAGGTGCACTGTTGATGAGTAGGTGAGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS-3UTR CAA 90 bp | TCACCTCACCTACTCATCAACAGTGCACCTACTACAGATTATAAAGTGCTTTTGGTTAGGCTGATCACGTaGATTGAAATATCTGCACAA | + |
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Preference number: 5 (lower is better) Translates to: SPHLLINSAPTTDYKVLLVRLIT*IEISAQ Trigger: TTGTGCAGATATTTCAATCAACGTGATCAGCCTAAC...CAAAAGCACTTTATAATCTGTAGTAGGTGCACTGTTGATGAGTAGGTGAGGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS-3UTR CAA 90 bp | GTACAATTAATATTCACCTCACCTACTCATCAACAGTGCACCTACTACAGATTAGTTAGGCTGATCACGTaGATTGAAATATCTGCACAA | + |
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Preference number: 5 (lower is better) Translates to: VQLIFTSPTHQQCTYYRLVRLIT*IEISAQ Trigger: TTGTGCAGATATTTCAATCAACGTGATCAGCCTAAC...TAATCTGTAGTAGGTGCACTGTTGATGAGTAGGTGAGGTGAATATTAATTGTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS CAA 72 bp | CCCATAGAAGAGGGAGATGAGGGCCTCCATCACGCTTaGATGGCCTGCCCCAGCGGTGTCTTTAGACTTGGG | + |
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Preference number: 6 (lower is better) Translates to: PIEEGDEGLHHA*MACPSGVFRLG Trigger: CCCAAGTCTAAAGACACCGCTGGGGCAGGCCATCAAAGCGTGATGGAGGCCCTCATCTCCCTCTTCTATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051600.3 ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS CAA 90 bp | GGAACAGCTAGAAAAAGCAGATTTGACCCTGTTAGGCTGATCACGTaGATTGAAATATCTGCACAAGCCAGTTCCAGAATGCCCAGAATT | + |
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Preference number: 6 (lower is better) Translates to: GTARKSRFDPVRLIT*IEISAQASSRMPRI Trigger: AATTCTGGGCATTCTGGAACTGGCTTGTGCAGATATTTCAATCAACGTGATCAGCCTAACAGGGTCAAATCTGCTTTTTCTAGCTGTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051600.3 ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS TCA 72 bp | AGTTCCAGAATGCCCAGAATTTCGCAGACGAAGTGGTaGATGACATTATTAGTGCAGAATGGTAATTGCACT | + |
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Preference number: 6 (lower is better) Translates to: SSRMPRISQTKW*MTLLVQNGNCT Trigger: AGTGCAATTACCATTCTGCACTAATAATGTCATTCACCACTTCGTCTGCGAAATTCTGGGCATTCTGGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051600.3 ENSMUST00000107667.3 ENSMUST00000213989.2 |
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| CDS CAA 72 bp | AGAAAAAGCAGATTTGACCCTGTTAGGCTGATCACGTaGATTGAAATATCTGCACAAGCCAGTTCCAGAATG | + |
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Preference number: 6 (lower is better) Translates to: RKSRFDPVRLIT*IEISAQASSRM Trigger: CATTCTGGAACTGGCTTGTGCAGATATTTCAATCAACGTGATCAGCCTAACAGGGTCAAATCTGCTTTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051600.3 ENSMUST00000107667.3 ENSMUST00000213989.2 |
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