Pregenerated sensors for OLFR267 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043385Ensembl transcript IDs: ENSMUST00000216719.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGGACTTCTCATCTGTTTGTCCCTCTTCTGGTCATATCTCAGCCTaGAGACTTAGTCCCATGTCCACACCTTCACTGCCTTGTAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: KDFSSVCPSSGHISA*RLSPMSTPSLPCSK Trigger: CTTGCTACAAGGCAGTGAAGGTGTGGACATGGGACTAAGTCTTCAGGCTGAGATATGACCAGAAGAGGGACAAACAGATGAGAAGTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR TCA 90 bp | AAGAGCCATCTGCCCCATTTCTCTCATGATTCCCTTTCTGACACTTaGAGGACTTCTCATCTGTTTGTCCCTCTTCTGGTCATATCTCAG | + |
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Preference number: 1 (lower is better) Translates to: KSHLPHFSHDSLSDT*RTSHLFVPLLVISQ Trigger: CTGAGATATGACCAGAAGAGGGACAAACAGATGAGAAGTCCTTCAAGTGTCAGAAAGGGAATCATGAGAGAAATGGGGCAGATGGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR TCA 90 bp | CTACATTTATCCAAGTTTTATTTTGGATTTGGAGCAAATTTCCAGTaGCTGAATTGCTGTCCTCCCAACTATGACACACCAAAGACAAGA | + |
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Preference number: 1 (lower is better) Translates to: LHLSKFYFGFGANFQ*LNCCPPNYDTPKTR Trigger: TCTTGTCTTTGGTGTGTCATAGTTGGGAGGACAGCAATTCAGTCACTGGAAATTTGCTCCAAATCCAAAATAAAACTTGGATAAATGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR TCA 90 bp | ATTTATCCAAGTTTTATTTTGGATTTGGAGCAAATTTCCAGTGACTaGATTGCTGTCCTCCCAACTATGACACACCAAAGACAAGAAGTA | + |
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Preference number: 1 (lower is better) Translates to: IYPSFILDLEQISSD*IAVLPTMTHQRQEV Trigger: TACTTCTTGTCTTTGGTGTGTCATAGTTGGGAGGACAGCAATTCAGTCACTGGAAATTTGCTCCAAATCCAAAATAAAACTTGGATAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAGATGTAGGAGGAGTTCTTGGGTTCCCAGGCTTGGGGTCTGAGAAGACCGGAGCAAATTTCCAGTaGCTGAATTGCTGTCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: RRDVGGVLGFPGLGSEKTGANFQ*LNCCPP Trigger: GGGAGGACAGCAATTCAGTCACTGGAAATTTGCTCC...GGTCTTCTCAGACCCCAAGCCTGGGAACCCAAGAACTCCTCCTACATCTCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGGCAGAAGAGATGTAGGAGGAGTTCTTGGGTTCCCAGGCTTGGGGTCTGAGCCTTGCCAGTCATTGTaGAGTCAGTCATCCAATAAA | + |
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Preference number: 2 (lower is better) Translates to: LGRRDVGGVLGFPGLGSEPCQSL*SQSSNK Trigger: TTTATTGGATGACTGACTTCACAATGACTGGCAAGG...CTCAGACCCCAAGCCTGGGAACCCAAGAACTCCTCCTACATCTCTTCTGCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAGATGTAGGAGGAGTTCTTGGGTTCCCAGGCTTGGGGTCTGAGAAGACCACTGCAATGTGCCATTaGAAATACCAGAGAGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: RRDVGGVLGFPGLGSEKTTAMCH*KYQREE Trigger: TTCCTCTCTCTGGTATTTTCAATGGCACATTGCAGT...GGTCTTCTCAGACCCCAAGCCTGGGAACCCAAGAACTCCTCCTACATCTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTCTCATCTGTTTGTCCCTCTTCTGGTCATATCTCAGCCTGAAGACTTAGTCGCTGAGTTCTGCCAATaGCAGGTGCATCCTTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: TSHLFVPLLVISQPEDLVAEFCQ*QVHPWE Trigger: TTCCCAAGGATGCACCTGCCATTGGCAGAACTCAGC...GACTAAGTCTTCAGGCTGAGATATGACCAGAAGAGGGACAAACAGATGAGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTCTCATCTGTTTGTCCCTCTTCTGGTCATATCTCAGCCTGAAGACTTAGTCTCTGCCAATGGCAGGTaGATCCTTGGGAAAGTCATG | + |
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Preference number: 2 (lower is better) Translates to: TSHLFVPLLVISQPEDLVSANGR*ILGKVM Trigger: CATGACTTTCCCAAGGATGCACCTGCCATTGGCAGA...GACTAAGTCTTCAGGCTGAGATATGACCAGAAGAGGGACAAACAGATGAGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR-3UTR GCA 90 bp | CCATGGAGTAGAATAAGCTCTGACCAAGAAGCCAGAAGGACATTGTCATCAAAGTTCTCTGCTGAGTTCTaGCAATGGCAGGTGCATCCT | + |
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Preference number: 2 (lower is better) Translates to: PWSRISSDQEARRTLSSKFSAEF*QWQVHP Trigger: AGGATGCACCTGCCATTGGCAGAACTCAGCAGAGAA...CTTTGATGACAATGTCCTTCTGGCTTCTTGGTCAGAGCTTATTCTACTCCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGAAGGACTTCTCATCTGTTTGTCCCTCTTCTGGTCATATCTCAGCCTGAAGTCCTTGGGAAAGTCATaGGTACCCAATAAAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: LEGLLICLSLFWSYLSLKSLGKS*VPNKRQ Trigger: CTGTCTTTTATTGGGTACCCATGACTTTCCCAAGGA...CTTCAGGCTGAGATATGACCAGAAGAGGGACAAACAGATGAGAAGTCCTTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTCTCATCTGTTTGTCCCTCTTCTGGTCATATCTCAGCCTGAAGACTTAGTCGCCACAATACAGTGTTaGTCAGGTATTTTGCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: TSHLFVPLLVISQPEDLVATIQC*SGILLF Trigger: AAAAAGCAAAATACCTGATCAACACTGTATTGTGGC...GACTAAGTCTTCAGGCTGAGATATGACCAGAAGAGGGACAAACAGATGAGAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGAAGGACTTCTCATCTGTTTGTCCCTCTTCTGGTCATATCTCAGCCTGAAGATTGTCATCAAAGTTTaGCACAATACAGTGTTGATC | + |
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Preference number: 2 (lower is better) Translates to: LEGLLICLSLFWSYLSLKIVIKV*HNTVLI Trigger: GATCAACACTGTATTGTGGCAAACTTTGATGACAAT...CTTCAGGCTGAGATATGACCAGAAGAGGGACAAACAGATGAGAAGTCCTTCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR CAA 90 bp | GAAAAAGACTTAACATATAGAAAGAATAGCTTCACGGGAATAGATTaGCTTAGAAAAAGCAAAGTTGGCAGGCAGATGTCAAGCAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: EKDLTYRKNSFTGID*LRKSKVGRQMSSKP Trigger: AGGCTTGCTTGACATCTGCCTGCCAACTTTGCTTTTTCTAAGCAAATCTATTCCCGTGAAGCTATTCTTTCTATATGTTAAGTCTTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR-3UTR CAA 90 bp | CTTGAAGGACTTCTCATCTGTTTGTCCCTCTTCTGGTCATATCTCAGCCTGAAGATGGCAGGTGCATCCTaGGGAAAGTCATGGGTACCC | + |
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Preference number: 3 (lower is better) Translates to: LEGLLICLSLFWSYLSLKMAGAS*GKSWVP Trigger: GGGTACCCATGACTTTCCCAAGGATGCACCTGCCAT...CTTCAGGCTGAGATATGACCAGAAGAGGGACAAACAGATGAGAAGTCCTTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR TCA 72 bp | TCATCTGTTTGTCCCTCTTCTGGTCATATCTCAGCCTaGAGACTTAGTCCCATGTCCACACCTTCACTGCCT | + |
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Preference number: 3 (lower is better) Translates to: SSVCPSSGHISA*RLSPMSTPSLP Trigger: AGGCAGTGAAGGTGTGGACATGGGACTAAGTCTTCAGGCTGAGATATGACCAGAAGAGGGACAAACAGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR TCA 72 bp | ACCACATGGTGGCTCATAACCATCTATAACGAGATCTaGCGCCCTCTTCTGGAGTGTCTGAAGGAAGCTACA | + |
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Preference number: 3 (lower is better) Translates to: TTWWLITIYNEI*RPLLECLKEAT Trigger: TGTAGCTTCCTTCAGACACTCCAGAAGAGGGCGTCAGATCTCGTTATAGATGGTTATGAGCCACCATGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR-3UTR CAA 90 bp | CTAGGCAGAAGAGATGTAGGAGGAGTTCTTGGGTTCCCAGGCTTGGGGTCTGAGCATTGTCATCAAAGTTaGCCACAATACAGTGTTGAT | + |
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Preference number: 3 (lower is better) Translates to: LGRRDVGGVLGFPGLGSEHCHQS*PQYSVD Trigger: ATCAACACTGTATTGTGGCAAACTTTGATGACAATG...CTCAGACCCCAAGCCTGGGAACCCAAGAACTCCTCCTACATCTCTTCTGCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR TCA 72 bp | CTGCCCCATTTCTCTCATGATTCCCTTTCTGACACTTaGAGGACTTCTCATCTGTTTGTCCCTCTTCTGGTC | + |
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Preference number: 3 (lower is better) Translates to: LPHFSHDSLSDT*RTSHLFVPLLV Trigger: GACCAGAAGAGGGACAAACAGATGAGAAGTCCTTCAAGTGTCAGAAAGGGAATCATGAGAGAAATGGGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR-3UTR CAA 90 bp | CTTGAAGGACTTCTCATCTGTTTGTCCCTCTTCTGGTCATATCTCAGCCTGAAGTTAGAAAAAGCAAAGTaGGCAGGCAGATGTCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: LEGLLICLSLFWSYLSLKLEKAK*AGRCQA Trigger: TGCTTGACATCTGCCTGCCAACTTTGCTTTTTCTAA...CTTCAGGCTGAGATATGACCAGAAGAGGGACAAACAGATGAGAAGTCCTTCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR-3UTR CAA 90 bp | GACTTAGTCCCATGTCCACACCTTCACTGCCTTGTAGCAAGCAGACACATTACATGCCACAATACAGTGTaGATCAGGTATTTTGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: DLVPCPHLHCLVASRHITCHNTV*IRYFAF Trigger: AAAAGCAAAATACCTGATCAACACTGTATTGTGGCA...TGTAATGTGTCTGCTTGCTACAAGGCAGTGAAGGTGTGGACATGGGACTAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR GCA 72 bp | AGAGTTTGCATGTACCCACATGACACTATGTACCCTTaGCCCCCAAGTTATCCCTCATTGATGAATAAAGAT | + |
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Preference number: 3 (lower is better) Translates to: RVCMYPHDTMYP*PPSYPSLMNKD Trigger: ATCTTTATTCATCAATGAGGGATAACTTGGGGGGCAAGGGTACATAGTGTCATGTGGGTACATGCAAACTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR-3UTR CAA 90 bp | AACTGCATCTTTATGAAACATGTGTCTGGAGTCACTACTGTCATGGTTGAGTTCGAAGCCAGAAGGACATaGTCATCAAAGTTTGCCACA | + |
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Preference number: 3 (lower is better) Translates to: NCIFMKHVSGVTTVMVEFEARRT*SSKFAT Trigger: TGTGGCAAACTTTGATGACAATGTCCTTCTGGCTTC...GAACTCAACCATGACAGTAGTGACTCCAGACACATGTTTCATAAAGATGCAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR TCA 72 bp | TCCAAGTTTTATTTTGGATTTGGAGCAAATTTCCAGTaGCTGAATTGCTGTCCTCCCAACTATGACACACCA | + |
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Preference number: 3 (lower is better) Translates to: SKFYFGFGANFQ*LNCCPPNYDTP Trigger: TGGTGTGTCATAGTTGGGAGGACAGCAATTCAGTCACTGGAAATTTGCTCCAAATCCAAAATAAAACTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR TCA 72 bp | CAGGAACTGAATGACCAAAGGCAGGGTAGAAGTCCCTaGTTGAGATTAAATATTTTCAACAACTGCATCTTT | + |
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Preference number: 3 (lower is better) Translates to: QELNDQRQGRSP*LRLNIFNNCIF Trigger: AAAGATGCAGTTGTTGAAAATATTTAATCTCAATCAGGGACTTCTACCCTGCCTTTGGTCATTCAGTTCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| CDS-3UTR CCA 90 bp | CTAGGCAGAAGAGATGTAGGAGGAGTTCTTGGGTTCCCAGGCTTGGGGTCTGAGTCACCCAGGAGATGGTaGCCATCTGCACACAGACTT | + |
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Preference number: 4 (lower is better) Translates to: LGRRDVGGVLGFPGLGSESPRRW*PSAHRL Trigger: AAGTCTGTGTGCAGATGGCCACCATCTCCTGGGTGA...CTCAGACCCCAAGCCTGGGAACCCAAGAACTCCTCCTACATCTCTTCTGCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| CDS-3UTR GCA 90 bp | CTAGGCAGAAGAGATGTAGGAGGAGTTCTTGGGTTCCCAGGCTTGGGGTCTGAGATCTGCACACAGACTTaGCTGTTCATGATGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: LGRRDVGGVLGFPGLGSEICTQT*LFMMMG Trigger: CCCCATCATCATGAACAGGCAAGTCTGTGTGCAGAT...CTCAGACCCCAAGCCTGGGAACCCAAGAACTCCTCCTACATCTCTTCTGCCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| CDS-3UTR GCA 90 bp | CTTGAAGGACTTCTCATCTGTTTGTCCCTCTTCTGGTCATATCTCAGCCTGAAGGAGATGGTGGCCATCTaGACACAGACTTGCCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: LEGLLICLSLFWSYLSLKEMVAI*TQTCLF Trigger: GAACAGGCAAGTCTGTGTGCAGATGGCCACCATCTC...CTTCAGGCTGAGATATGACCAGAAGAGGGACAAACAGATGAGAAGTCCTTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| CDS-3UTR CCA 90 bp | GACTTAGTCCCATGTCCACACCTTCACTGCCTTGTAGCAAGCAGACACATTACAACTCTGTGGACCCCATaGAAAGGGACAGGTACATCT | + |
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Preference number: 4 (lower is better) Translates to: DLVPCPHLHCLVASRHITTLWTP*KGTGTS Trigger: AGATGTACCTGTCCCTTTCCATGGGGTCCACAGAGT...TGTAATGTGTCTGCTTGCTACAAGGCAGTGAAGGTGTGGACATGGGACTAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| CDS-3UTR TCA 90 bp | CTAGGCAGAAGAGATGTAGGAGGAGTTCTTGGGTTCCCAGGCTTGGGGTCTGAGAATGGTTTTCTTAGATaGCAGCAAGTTCACAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: LGRRDVGGVLGFPGLGSENGFLR*QQVHKQ Trigger: TTGCTTGTGAACTTGCTGTCATCTAAGAAAACCATT...CTCAGACCCCAAGCCTGGGAACCCAAGAACTCCTCCTACATCTCTTCTGCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| CDS-3UTR GCA 90 bp | CTTGAAGGACTTCTCATCTGTTTGTCCCTCTTCTGGTCATATCTCAGCCTGAAGAGGGACAGGTACATCTaGACAGCACACCCAGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: LEGLLICLSLFWSYLSLKRDRYI*TAHPEK Trigger: CTTTTCTGGGTGTGCTGTGCAGATGTACCTGTCCCT...CTTCAGGCTGAGATATGACCAGAAGAGGGACAAACAGATGAGAAGTCCTTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| CDS-3UTR GCA 90 bp | GACTTAGTCCCATGTCCACACCTTCACTGCCTTGTAGCAAGCAGACACATTACAGTGCCAAGGGCACTTTaGCCAGCAGTTTTATCATTG | + |
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Preference number: 4 (lower is better) Translates to: DLVPCPHLHCLVASRHITVPRAL*PAVLSL Trigger: CAATGATAAAACTGCTGGGCAAAGTGCCCTTGGCAC...TGTAATGTGTCTGCTTGCTACAAGGCAGTGAAGGTGTGGACATGGGACTAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| CDS-3UTR CCA 90 bp | CTTGAAGGACTTCTCATCTGTTTGTCCCTCTTCTGGTCATATCTCAGCCTGAAGGAAGTATACACTCTGTaGACCCCATGGAAAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: LEGLLICLSLFWSYLSLKEVYTL*TPWKGT Trigger: TGTCCCTTTCCATGGGGTCCACAGAGTGTATACTTC...CTTCAGGCTGAGATATGACCAGAAGAGGGACAAACAGATGAGAAGTCCTTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| CDS-3UTR TCA 90 bp | AACTGCATCTTTATGAAACATGTGTCTGGAGTCACTACTGTCATGGTTGAGTTCGTTTCTTCCCTCTGTTaGACTGATCCTCAGAATTGT | + |
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Preference number: 4 (lower is better) Translates to: NCIFMKHVSGVTTVMVEFVSSLC*TDPQNC Trigger: ACAATTCTGAGGATCAGTTCAACAGAGGGAAGAAAC...GAACTCAACCATGACAGTAGTGACTCCAGACACATGTTTCATAAAGATGCAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| CDS-3UTR CCA 90 bp | AAGAATAGCTTCACGGGAATAGATTTGCTTAGAAAAAGCAAAGTTGGCAGGCAGGCAAATCAAGAGCATTaGAATGGGCAGAAGGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: KNSFTGIDLLRKSKVGRQANQEH*NGQKEN Trigger: ATTCTCCTTCTGCCCATTCCAATGCTCTTGATTTGC...CTGCCTGCCAACTTTGCTTTTTCTAAGCAAATCTATTCCCGTGAAGCTATTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR CAA 72 bp | CTGACCAAGAAGCCAGAAGGACATTGTCATCAAAGTTaGCCACAATACAGTGTTGATCAGGTATTTTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: LTKKPEGHCHQS*PQYSVDQVFCF Trigger: AAAGCAAAATACCTGATCAACACTGTATTGTGGCAAACTTTGATGACAATGTCCTTCTGGCTTCTTGGTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| CDS-3UTR TCA 90 bp | AAGAATAGCTTCACGGGAATAGATTTGCTTAGAAAAAGCAAAGTTGGCAGGCAGCATAAAGCAACGAGATaGTTTTGTCTATCTCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: KNSFTGIDLLRKSKVGRQHKATR*FCLSLV Trigger: CACAAGAGATAGACAAAATCATCTCGTTGCTTTATG...CTGCCTGCCAACTTTGCTTTTTCTAAGCAAATCTATTCCCGTGAAGCTATTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| 3UTR CAA 72 bp | TTAACATATAGAAAGAATAGCTTCACGGGAATAGATTaGCTTAGAAAAAGCAAAGTTGGCAGGCAGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: LTYRKNSFTGID*LRKSKVGRQMS Trigger: TGACATCTGCCTGCCAACTTTGCTTTTTCTAAGCAAATCTATTCCCGTGAAGCTATTCTTTCTATATGTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| CDS-3UTR CAA 90 bp | GACTTAGTCCCATGTCCACACCTTCACTGCCTTGTAGCAAGCAGACACATTACATCACATGTGAAATGGTaGATGATGTTCCCACAGAGG | + |
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Preference number: 5 (lower is better) Translates to: DLVPCPHLHCLVASRHITSHVKW*MMFPQR Trigger: CCTCTGTGGGAACATCATCAACCATTTCACATGTGA...TGTAATGTGTCTGCTTGCTACAAGGCAGTGAAGGTGTGGACATGGGACTAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| CDS-3UTR CAA 90 bp | AAGAATAGCTTCACGGGAATAGATTTGCTTAGAAAAAGCAAAGTTGGCAGGCAGCATCTGCACACAGACTaGCCTGTTCATGATGATGGG | + |
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Preference number: 5 (lower is better) Translates to: KNSFTGIDLLRKSKVGRQHLHTD*PVHDDG Trigger: CCCATCATCATGAACAGGCAAGTCTGTGTGCAGATG...CTGCCTGCCAACTTTGCTTTTTCTAAGCAAATCTATTCCCGTGAAGCTATTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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| CDS-3UTR CAA 90 bp | AACTGCATCTTTATGAAACATGTGTCTGGAGTCACTACTGTCATGGTTGAGTTCCTATCTCTTGTGAGTTaGATGAAGAAGGCTTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: NCIFMKHVSGVTTVMVEFLSLVS*MKKASG Trigger: ACCTGAAGCCTTCTTCATCAAACTCACAAGAGATAG...GAACTCAACCATGACAGTAGTGACTCCAGACACATGTTTCATAAAGATGCAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216719.2 |
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