Pregenerated sensors for OLFR266 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043529Ensembl transcript IDs: ENSMUST00000059486.3, ENSMUST00000213616.3, ENSMUST00000216610.2
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTTACTGTCTCCATCACTTTCTCTTTTCAAGAATATTGTATTCTTaGAAACACAGAGATTGTGGCTTTTTCAGCAGCATTAGTGGTATT | + |
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Preference number: 1 (lower is better) Translates to: CYCLHHFLFSRILYS*KHRDCGFFSSISGI Trigger: AATACCACTAATGCTGCTGAAAAAGCCACAATCTCTGTGTTTCCAAGAATACAATATTCTTGAAAAGAGAAAGTGATGGAGACAGTAACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213616.3 |
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| 3UTR CAA 90 bp | AAACACAGAGATTGTGGCTTTTTCAGCAGCATTAGTGGTATTCCTTaGATAGCTCTCTGTATCTTTCCATCCTTTGGTGACTTAGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: KHRDCGFFSSISGIP*IALCIFPSFGDLAL Trigger: AAGAGCTAAGTCACCAAAGGATGGAAAGATACAGAGAGCTATCAAAGGAATACCACTAATGCTGCTGAAAAAGCCACAATCTCTGTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213616.3 |
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| 3UTR-3UTR TCA 90 bp | TCTTGGAAACACAGAGATTGTGGCTTTTTCAGCAGCATTAGTGGTATTCCTTTGCTTTCCATCCTTTGGTaGCTTAGCTCTTTTTATAGC | + |
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Preference number: 2 (lower is better) Translates to: SWKHRDCGFFSSISGIPLLSILW*LSSFYS Trigger: GCTATAAAAAGAGCTAAGTCACCAAAGGATGGAAAG...CAAAGGAATACCACTAATGCTGCTGAAAAAGCCACAATCTCTGTGTTTCCAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213616.3 |
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| 3UTR GCA 72 bp | CACTCTCCTGTAATTGTTTTATACTCTACTAATTCATaGTTCTTCCCCCTAATGTTTGGCAACTACTTCACC | + |
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Preference number: 3 (lower is better) Translates to: HSPVIVLYSTNS*FFPLMFGNYFT Trigger: GGTGAAGTAGTTGCCAAACATTAGGGGGAAGAAGCATGAATTAGTAGAGTATAAAACAATTACAGGAGAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213616.3 |
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| CDS-3UTR TCA 90 bp | CCCCAAACTGTCAGAACTCAGAAGCATCGACAGCCATCAGAGGCAGCTGCCATAAGAGAGAACCAGTCATaGGGATGGGGTATCGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: PQTVRTQKHRQPSEAAAIRENQS*GWGIGE Trigger: CTCTCCGATACCCCATCCTCATGACTGGTTCTCTCT...TATGGCAGCTGCCTCTGATGGCTGTCGATGCTTCTGAGTTCTGACAGTTTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR GCA 90 bp | CCCCCAAACTGTCAGAACTCAGAAGCATCGACAGCCATCAGAGGCAGCTGCCATCAAGAGGCACTCTGTTaGAGCAAGGGATCCAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: PPNCQNSEASTAIRGSCHQEALC*SKGSKE Trigger: TTCTTTGGATCCCTTGCTGCAACAGAGTGCCTCTTG...ATGGCAGCTGCCTCTGATGGCTGTCGATGCTTCTGAGTTCTGACAGTTTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR GCA 90 bp | CCCCCAAACTGTCAGAACTCAGAAGCATCGACAGCCATCAGAGGCAGCTGCCATAGAAAGCCTTTTTCCTaGCTGTGCCAGATGGGATTC | + |
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Preference number: 4 (lower is better) Translates to: PPNCQNSEASTAIRGSCHRKPFS*LCQMGF Trigger: GAATCCCATCTGGCACAGGCAGGAAAAAGGCTTTCT...ATGGCAGCTGCCTCTGATGGCTGTCGATGCTTCTGAGTTCTGACAGTTTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR CCA 90 bp | CCCCCAAACTGTCAGAACTCAGAAGCATCGACAGCCATCAGAGGCAGCTGCCATCCTTTGCGTAAATATTaGGAAGAGTTGGCTGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PPNCQNSEASTAIRGSCHPLRKY*EELAEG Trigger: GCCCTCAGCCAACTCTTCCCAATATTTACGCAAAGG...ATGGCAGCTGCCTCTGATGGCTGTCGATGCTTCTGAGTTCTGACAGTTTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR CCA 90 bp | CCCCCAAACTGTCAGAACTCAGAAGCATCGACAGCCATCAGAGGCAGCTGCCATAATATTGGGAAGAGTTaGCTGAGGGCACAAGATAGG | + |
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Preference number: 4 (lower is better) Translates to: PPNCQNSEASTAIRGSCHNIGKS*LRAQDR Trigger: CCTATCTTGTGCCCTCAGCCAACTCTTCCCAATATT...ATGGCAGCTGCCTCTGATGGCTGTCGATGCTTCTGAGTTCTGACAGTTTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR TCA 90 bp | CCCCAAACTGTCAGAACTCAGAAGCATCGACAGCCATCAGAGGCAGCTGCCATATCCACTATCACCGTTTaGTTTTCCCAGGATAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: PQTVRTQKHRQPSEAAAISTITV*FSQDKV Trigger: GACCTTATCCTGGGAAAATCAAACGGTGATAGTGGA...TATGGCAGCTGCCTCTGATGGCTGTCGATGCTTCTGAGTTCTGACAGTTTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR CCA 90 bp | CCCCCAAACTGTCAGAACTCAGAAGCATCGACAGCCATCAGAGGCAGCTGCCATAGGGCACAAGATAGGTaGCAATCAGTGTTCCATAAA | + |
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Preference number: 4 (lower is better) Translates to: PPNCQNSEASTAIRGSCHRAQDR*QSVFHK Trigger: TTTATGGAACACTGATTGCCACCTATCTTGTGCCCT...ATGGCAGCTGCCTCTGATGGCTGTCGATGCTTCTGAGTTCTGACAGTTTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR CCA 90 bp | CTGTCAGAACTCAGAAGCATCGACAGCCATCAGAGGCAGCTGCCATATAGTACTTCCATGCAGGAGAGATaGATCAAAGGGGCAAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: LSELRSIDSHQRQLPYSTSMQER*IKGAKS Trigger: TGACTTTGCCCCTTTGATCCATCTCTCCTGCATGGA...AGTACTATATGGCAGCTGCCTCTGATGGCTGTCGATGCTTCTGAGTTCTGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR CCA 90 bp | CCCCCAAACTGTCAGAACTCAGAAGCATCGACAGCCATCAGAGGCAGCTGCCATTATTCAGCTGTAAGATaGAAGAGAATCCTCGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: PPNCQNSEASTAIRGSCHYSAVR*KRILEE Trigger: TTCTTCGAGGATTCTCTTCCATCTTACAGCTGAATA...ATGGCAGCTGCCTCTGATGGCTGTCGATGCTTCTGAGTTCTGACAGTTTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR GCA 90 bp | TGTTCCTACACACCCAGTCTTCTCAATAACCAAATTCCATACCCAGGGGGTCAAAGAAAGCCTTTTTCCTaGCTGTGCCAGATGGGATTC | + |
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Preference number: 4 (lower is better) Translates to: CSYTPSLLNNQIPYPGGQRKPFS*LCQMGF Trigger: GAATCCCATCTGGCACAGGCAGGAAAAAGGCTTTCT...TTGACCCCCTGGGTATGGAATTTGGTTATTGAGAAGACTGGGTGTGTAGGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213616.3 |
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| CDS-3UTR TCA 90 bp | TGCTGTCTATGTTCTAGATTTTTGGCCCTTCTACTAGATGTGAATTGGCCATCTAGAGAGAACCAGTCATaGGGATGGGGTATCGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: CCLCSRFLALLLDVNWPSRENQS*GWGIGE Trigger: CTCTCCGATACCCCATCCTCATGACTGGTTCTCTCT...AGATGGCCAATTCACATCTAGTAGAAGGGCCAAAAATCTAGAACATAGACAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR TCA 90 bp | TACCCAGGGGGTCAAATTGTTAAACCAATGAGACATCACAATCACCCAATAACCAAAATGGGACCAGAGTaGCTGCAGAAGAGGTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: YPGGQIVKPMRHHNHPITKMGPE*LQKRWQ Trigger: TTGCCACCTCTTCTGCAGTCACTCTGGTCCCATTTT...GGTTATTGGGTGATTGTGATGTCTCATTGGTTTAACAATTTGACCCCCTGGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213616.3 |
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| CDS-3UTR GCA 90 bp | CTGTCAGAACTCAGAAGCATCGACAGCCATCAGAGGCAGCTGCCATATAGTACTTGTGAAGAGCATGGTTaGACAGCACTAGAAAAACAA | + |
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Preference number: 4 (lower is better) Translates to: LSELRSIDSHQRQLPYSTCEEHG*TALEKQ Trigger: TTGTTTTTCTAGTGCTGTGCAACCATGCTCTTCACA...AGTACTATATGGCAGCTGCCTCTGATGGCTGTCGATGCTTCTGAGTTCTGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR CCA 90 bp | CTGTCAGAACTCAGAAGCATCGACAGCCATCAGAGGCAGCTGCCATATAGTACTGGATGTTTCCAGAAATaGTTAGGATGTAGAAGATGC | + |
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Preference number: 4 (lower is better) Translates to: LSELRSIDSHQRQLPYSTGCFQK*LGCRRC Trigger: GCATCTTCTACATCCTAACCATTTCTGGAAACATCC...AGTACTATATGGCAGCTGCCTCTGATGGCTGTCGATGCTTCTGAGTTCTGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR TCA 90 bp | TGCTGTCTATGTTCTAGATTTTTGGCCCTTCTACTAGATGTGAATTGGCCATCTAAAATGGGACCAGAGTaGCTGCAGAAGAGGTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: CCLCSRFLALLLDVNWPSKMGPE*LQKRWQ Trigger: TTGCCACCTCTTCTGCAGTCACTCTGGTCCCATTTT...AGATGGCCAATTCACATCTAGTAGAAGGGCCAAAAATCTAGAACATAGACAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR GCA 90 bp | AGAAGCATCGACAGCCATCAGAGGCAGCTGCCATATAGTACTTTTCTTTTTCATCAAGAGGCACTCTGTTaGAGCAAGGGATCCAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: RSIDSHQRQLPYSTFLFHQEALC*SKGSKE Trigger: TTCTTTGGATCCCTTGCTGCAACAGAGTGCCTCTTG...ATGAAAAAGAAAAGTACTATATGGCAGCTGCCTCTGATGGCTGTCGATGCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR CCA 90 bp | CTGTCAGAACTCAGAAGCATCGACAGCCATCAGAGGCAGCTGCCATATAGTACTACTGAGATAGTCTTCTaGTCAGCTATAATAATCAGC | + |
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Preference number: 4 (lower is better) Translates to: LSELRSIDSHQRQLPYSTTEIVF*SAIIIS Trigger: GCTGATTATTATAGCTGACCAGAAGACTATCTCAGT...AGTACTATATGGCAGCTGCCTCTGATGGCTGTCGATGCTTCTGAGTTCTGACAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR TCA 90 bp | TGCTGTCTATGTTCTAGATTTTTGGCCCTTCTACTAGATGTGAATTGGCCATCTAACGGTCTCAATCAGTaGAGTATCCATGCAGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: CCLCSRFLALLLDVNWPSNGLNQ*SIHAGE Trigger: CTCTCCTGCATGGATACTTCACTGATTGAGACCGTT...AGATGGCCAATTCACATCTAGTAGAAGGGCCAAAAATCTAGAACATAGACAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR GCA 90 bp | TCTTGGAAACACAGAGATTGTGGCTTTTTCAGCAGCATTAGTGGTATTCCTTTGCCTTTTTCCTGCCTGTaGCAGATGGGATTCTTAGGA | + |
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Preference number: 4 (lower is better) Translates to: SWKHRDCGFFSSISGIPLPFSCL*QMGFLG Trigger: TCCTAAGAATCCCATCTGGCACAGGCAGGAAAAAGG...CAAAGGAATACCACTAATGCTGCTGAAAAAGCCACAATCTCTGTGTTTCCAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213616.3 |
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| CDS-3UTR CCA 90 bp | TGCTGTCTATGTTCTAGATTTTTGGCCCTTCTACTAGATGTGAATTGGCCATCTTCCATGCAGGAGAGATaGATCAAAGGGGCAAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: CCLCSRFLALLLDVNWPSSMQER*IKGAKS Trigger: TGACTTTGCCCCTTTGATCCATCTCTCCTGCATGGA...AGATGGCCAATTCACATCTAGTAGAAGGGCCAAAAATCTAGAACATAGACAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR TCA 90 bp | TCTTGGAAACACAGAGATTGTGGCTTTTTCAGCAGCATTAGTGGTATTCCTTTGTCCACTATCACCGTTTaGTTTTCCCAGGATAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SWKHRDCGFFSSISGIPLSTITV*FSQDKV Trigger: GACCTTATCCTGGGAAAATCAAACGGTGATAGTGGA...CAAAGGAATACCACTAATGCTGCTGAAAAAGCCACAATCTCTGTGTTTCCAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213616.3 |
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| CDS-3UTR CCA 90 bp | TACCCAGGGGGTCAAATTGTTAAACCAATGAGACATCACAATCACCCAATAACCAGGGCACAAGATAGGTaGCAATCAGTGTTCCATAAA | + |
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Preference number: 4 (lower is better) Translates to: YPGGQIVKPMRHHNHPITRAQDR*QSVFHK Trigger: TTTATGGAACACTGATTGCCACCTATCTTGTGCCCT...GGTTATTGGGTGATTGTGATGTCTCATTGGTTTAACAATTTGACCCCCTGGGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213616.3 |
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| CDS-3UTR CCA 90 bp | TGCTGTCTATGTTCTAGATTTTTGGCCCTTCTACTAGATGTGAATTGGCCATCTAATATTGGGAAGAGTTaGCTGAGGGCACAAGATAGG | + |
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Preference number: 4 (lower is better) Translates to: CCLCSRFLALLLDVNWPSNIGKS*LRAQDR Trigger: CCTATCTTGTGCCCTCAGCCAACTCTTCCCAATATT...AGATGGCCAATTCACATCTAGTAGAAGGGCCAAAAATCTAGAACATAGACAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR GCA 90 bp | TACCCAGGGGGTCAAATTGTTAAACCAATGAGACATCACAATCACCCAATAACCTGTGAAGAGCATGGTTaGACAGCACTAGAAAAACAA | + |
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Preference number: 4 (lower is better) Translates to: YPGGQIVKPMRHHNHPITCEEHG*TALEKQ Trigger: TTGTTTTTCTAGTGCTGTGCAACCATGCTCTTCACA...GGTTATTGGGTGATTGTGATGTCTCATTGGTTTAACAATTTGACCCCCTGGGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213616.3 |
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| CDS-3UTR GCA 90 bp | AGAAGCATCGACAGCCATCAGAGGCAGCTGCCATATAGTACTTTTCTTTTTCATGCAGAGAGAAACCTTTaGGTAAATATTGGGAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: RSIDSHQRQLPYSTFLFHAERNL*VNIGKS Trigger: ACTCTTCCCAATATTTACGCAAAGGTTTCTCTCTGC...ATGAAAAAGAAAAGTACTATATGGCAGCTGCCTCTGATGGCTGTCGATGCTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR CCA 90 bp | AGAAGCATCGACAGCCATCAGAGGCAGCTGCCATATAGTACTTTTCTTTTTCATGGATGTTTCCAGAAATaGTTAGGATGTAGAAGATGC | + |
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Preference number: 4 (lower is better) Translates to: RSIDSHQRQLPYSTFLFHGCFQK*LGCRRC Trigger: GCATCTTCTACATCCTAACCATTTCTGGAAACATCC...ATGAAAAAGAAAAGTACTATATGGCAGCTGCCTCTGATGGCTGTCGATGCTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR CCA 90 bp | TTTCGCCACATTCTTACCAGTATTTGGTGCTGTCTATGTTCTAGATTTTTGGCCTGTGATAAGGAAAAATaGGACCAGAGTGACTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: FRHILTSIWCCLCSRFLACDKEK*DQSDCR Trigger: TCTGCAGTCACTCTGGTCCCATTTTTCCTTATCACA...GGCCAAAAATCTAGAACATAGACAGCACCAAATACTGGTAAGAATGTGGCGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR CCA 90 bp | GGTCAAATTGTTAAACCAATGAGACATCACAATCACCCAATAACCAATTGTGGTCCTTTGCGTAAATATTaGGAAGAGTTGGCTGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GQIVKPMRHHNHPITNCGPLRKY*EELAEG Trigger: GCCCTCAGCCAACTCTTCCCAATATTTACGCAAAGG...ACCACAATTGGTTATTGGGTGATTGTGATGTCTCATTGGTTTAACAATTTGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213616.3 |
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| CDS-3UTR GCA 90 bp | TGCTGTCTATGTTCTAGATTTTTGGCCCTTCTACTAGATGTGAATTGGCCATCTGCAGAGAGAAACCTTTaGGTAAATATTGGGAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: CCLCSRFLALLLDVNWPSAERNL*VNIGKS Trigger: ACTCTTCCCAATATTTACGCAAAGGTTTCTCTCTGC...AGATGGCCAATTCACATCTAGTAGAAGGGCCAAAAATCTAGAACATAGACAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR CCA 90 bp | TACCCAGGGGGTCAAATTGTTAAACCAATGAGACATCACAATCACCCAATAACCTATTCAGCTGTAAGATaGAAGAGAATCCTCGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: YPGGQIVKPMRHHNHPITYSAVR*KRILEE Trigger: TTCTTCGAGGATTCTCTTCCATCTTACAGCTGAATA...GGTTATTGGGTGATTGTGATGTCTCATTGGTTTAACAATTTGACCCCCTGGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213616.3 |
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| CDS-3UTR CCA 90 bp | TGGAAACACAGAGATTGTGGCTTTTTCAGCAGCATTAGTGGTATTCCTTTGATATGTGATAAGGAAAAATaGGACCAGAGTGACTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: WKHRDCGFFSSISGIPLICDKEK*DQSDCR Trigger: TCTGCAGTCACTCTGGTCCCATTTTTCCTTATCACA...TATCAAAGGAATACCACTAATGCTGCTGAAAAAGCCACAATCTCTGTGTTTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213616.3 |
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| CDS-3UTR CAA 90 bp | CCCCAAACTGTCAGAACTCAGAAGCATCGACAGCCATCAGAGGCAGCTGCCATAAGGGCCACAGAAGTTTaGTCTACACAGCAGGACCAT | + |
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Preference number: 5 (lower is better) Translates to: PQTVRTQKHRQPSEAAAIRATEV*STQQDH Trigger: ATGGTCCTGCTGTGTAGACAAAACTTCTGTGGCCCT...TATGGCAGCTGCCTCTGATGGCTGTCGATGCTTCTGAGTTCTGACAGTTTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS TCA 90 bp | CAGAGTGACTGCAGAAGAGGTGGCAAAGGCAACGGTCTCAATCAGTaGAGTATCCATGCAGGAGAGATGGATCAAAGGGGCAAAGTCACA | + |
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Preference number: 5 (lower is better) Translates to: QSDCRRGGKGNGLNQ*SIHAGEMDQRGKVT Trigger: TGTGACTTTGCCCCTTTGATCCATCTCTCCTGCATGGATACTTCACTGATTGAGACCGTTGCCTTTGCCACCTCTTCTGCAGTCACTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059486.3 ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR CAA 90 bp | AGAAGCATCGACAGCCATCAGAGGCAGCTGCCATATAGTACTTTTCTTTTTCATGCAAGAGGCACTCTGTaGCAGCAAGGGATCCAAAGA | + |
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Preference number: 5 (lower is better) Translates to: RSIDSHQRQLPYSTFLFHARGTL*QQGIQR Trigger: TCTTTGGATCCCTTGCTGCAACAGAGTGCCTCTTGC...ATGAAAAAGAAAAGTACTATATGGCAGCTGCCTCTGATGGCTGTCGATGCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS-3UTR CAA 90 bp | TGGAAACACAGAGATTGTGGCTTTTTCAGCAGCATTAGTGGTATTCCTTTGATAGCAAGAGGCACTCTGTaGCAGCAAGGGATCCAAAGA | + |
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Preference number: 5 (lower is better) Translates to: WKHRDCGFFSSISGIPLIARGTL*QQGIQR Trigger: TCTTTGGATCCCTTGCTGCAACAGAGTGCCTCTTGC...TATCAAAGGAATACCACTAATGCTGCTGAAAAAGCCACAATCTCTGTGTTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213616.3 |
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| CDS-3UTR CAA 90 bp | TGCTGTCTATGTTCTAGATTTTTGGCCCTTCTACTAGATGTGAATTGGCCATCTAGGGCCACAGAAGTTTaGTCTACACAGCAGGACCAT | + |
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Preference number: 5 (lower is better) Translates to: CCLCSRFLALLLDVNWPSRATEV*STQQDH Trigger: ATGGTCCTGCTGTGTAGACAAAACTTCTGTGGCCCT...AGATGGCCAATTCACATCTAGTAGAAGGGCCAAAAATCTAGAACATAGACAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS TCA 90 bp | AGCAAGGGATCCAAAGAAGTAGAATTGTGCCAAGCAACCAACCACTaGGATAGTCTTCTGGTCAGCTATAATAATCAGCAACATCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: SKGSKEVELCQATNH*DSLLVSYNNQQHLG Trigger: CCCAAGATGTTGCTGATTATTATAGCTGACCAGAAGACTATCTCAGTGGTTGGTTGCTTGGCACAATTCTACTTCTTTGGATCCCTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059486.3 ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS TCA 72 bp | TGCAGAAGAGGTGGCAAAGGCAACGGTCTCAATCAGTaGAGTATCCATGCAGGAGAGATGGATCAAAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: CRRGGKGNGLNQ*SIHAGEMDQRG Trigger: GCCCCTTTGATCCATCTCTCCTGCATGGATACTTCACTGATTGAGACCGTTGCCTTTGCCACCTCTTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059486.3 ENSMUST00000213616.3 ENSMUST00000216610.2 |
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| CDS TCA 72 bp | TCCAAAGAAGTAGAATTGTGCCAAGCAACCAACCACTaGGATAGTCTTCTGGTCAGCTATAATAATCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: SKEVELCQATNH*DSLLVSYNNQQ Trigger: TTGCTGATTATTATAGCTGACCAGAAGACTATCTCAGTGGTTGGTTGCTTGGCACAATTCTACTTCTTTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059486.3 ENSMUST00000213616.3 ENSMUST00000216610.2 |
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