Pregenerated sensors for OLFR263 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071522Ensembl transcript IDs: ENSMUST00000096006.3, ENSMUST00000215804.2
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATGCAGACAAGGCCAACCAAAGGGCAGTGAAAATTAGACACATATaGAGACAATTCTGGATTGGCAGTGTAATACTCTTCTGGAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: NADKANQRAVKIRHI*RQFWIGSVILFWRS Trigger: AGACCTCCAGAAGAGTATTACACTGCCAATCCAGAATTGTCTGCATATGTGTCTAATTTTCACTGCCCTTTGGTTGGCCTTGTCTGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR TCA 90 bp | CTCACAAACCTTGCAAGTTTGGGGAAAGGTTATAAAATACAACAGTaGGTAAGATTATATTCATCCCACAGAACTTGCCATCTCTGTTGT | + |
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Preference number: 1 (lower is better) Translates to: LTNLASLGKGYKIQQ*VRLYSSHRTCHLCC Trigger: ACAACAGAGATGGCAAGTTCTGTGGGATGAATATAATCTTACTCACTGTTGTATTTTATAACCTTTCCCCAAACTTGCAAGGTTTGTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR CCA 90 bp | GTCTGCATCCACAAGAGGTCTGTATGTGAGAATTACTTCAGCAGTTaGTCTTTAAAATCTAAGGATTACTTTCCTTATTCAAATCTGAAC | + |
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Preference number: 1 (lower is better) Translates to: VCIHKRSVCENYFSS*SLKSKDYFPYSNLN Trigger: GTTCAGATTTGAATAAGGAAAGTAATCCTTAGATTTTAAAGACCAACTGCTGAAGTAATTCTCACATACAGACCTCTTGTGGATGCAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTGTCCTGTGACTCTTTTTGTAGGGCAGGCTGGTTTTGGACTCAGAGATCCATGTAATCCCAGCACTTaGGAGGTTGAAGCAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: SCPVTLFVGQAGFGLRDPCNPST*EVEAGG Trigger: TCCTCCTGCTTCAACCTCCCAAGTGCTGGGATTACA...TGGATCTCTGAGTCCAAAACCAGCCTGCCCTACAAAAAGAGTCACAGGACAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTTTGTGCCCTTGGGGCCAGAGAAGAACATCAGATCCCTTGGAATAGAGTTGACATGTATGAAGCCTTaGGTTCAGTCCCCAACACCA | + |
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Preference number: 2 (lower is better) Translates to: CFVPLGPEKNIRSLGIELTCMKP*VQSPTP Trigger: TGGTGTTGGGGACTGAACTCAAGGCTTCATACATGT...CAACTCTATTCCAAGGGATCTGATGTTCTTCTCTGGCCCCAAGGGCACAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGCTATGCACCACACGTGTGCTTTGTGCCCTTGGGGCCAGAGAAGAACATCAACATATACTGGGTGTaGTGGTATATGCTTGTAATC | + |
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Preference number: 2 (lower is better) Translates to: DGYAPHVCFVPLGPEKNINIYWV*WYMLVI Trigger: GATTACAAGCATATACCACCACACCCAGTATATGTT...GATGTTCTTCTCTGGCCCCAAGGGCACAAAGCACACGTGTGGTGCATAGCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTCTCTGTGTAACCCTAGCTGTCCTGTGACTCTTTTTGTAGGGCAGGCTGGTATCTTCCAAGTTGTCTaGATCCACAAGAGGTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: VSLCNPSCPVTLFVGQAGIFQVV*IHKRSV Trigger: TACAGACCTCTTGTGGATGCAGACAACTTGGAAGAT...ACCAGCCTGCCCTACAAAAAGAGTCACAGGACAGCTAGGGTTACACAGAGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTCTCTGTGTAACCCTAGCTGTCCTGTGACTCTTTTTGTAGGGCAGGCTGGTTGTATGTATTGTGTTTaGCAGAAAAGATGGCTATGC | + |
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Preference number: 2 (lower is better) Translates to: VSLCNPSCPVTLFVGQAGCMYCV*QKRWLC Trigger: GCATAGCCATCTTTTCTGGCAAACACAATACATACA...ACCAGCCTGCCCTACAAAAAGAGTCACAGGACAGCTAGGGTTACACAGAGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTGTCCTGTGACTCTTTTTGTAGGGCAGGCTGGTTTTGGACTCAGAGATCCAAAGCACATTAATTTGTaGCCATTCATTCTCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: SCPVTLFVGQAGFGLRDPKHINL*PFILSS Trigger: AGATGAGAGAATGAATGGGCACAAATTAATGTGCTT...TGGATCTCTGAGTCCAAAACCAGCCTGCCCTACAAAAAGAGTCACAGGACAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR CAA 90 bp | AAGAGATATAGTATAAGTTGTAGAGTGCTTAACATGTATGAAGCCTaGAGTTCAGTCCCCAACACCACACAGACTGGGTGTGGTAGTATA | + |
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Preference number: 2 (lower is better) Translates to: KRYSISCRVLNMYEA*SSVPNTTQTGCGSI Trigger: TATACTACCACACCCAGTCTGTGTGGTGTTGGGGACTGAACTCAAGGCTTCATACATGTTAAGCACTCTACAACTTATACTATATCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGTGGCAAATCTCATGAATGCTGACACGACTCATTGTTCAAAAAGCAATTTAAATGCTCTTTATTACTaGGCTGTCTCCCTTGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: TVANLMNADTTHCSKSNLNALYY*AVSLAL Trigger: CAGGGCAAGGGAGACAGCTCAGTAATAAAGAGCATT...TAAATTGCTTTTTGAACAATGAGTCGTGTCAGCATTCATGAGATTTGCCACAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR-3UTR TCA 90 bp | AAATGCTCTTTATTACTGAGCTGTCTCCCTTGCCCTGTGTTATCACTTTTAAAGTGTGAGCATTACCAATaGAACTATACAAGGAGACAC | + |
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Preference number: 2 (lower is better) Translates to: KCSLLLSCLPCPVLSLLKCEHYQ*NYTRRH Trigger: GTGTCTCCTTGTATAGTTTCATTGGTAATGCTCACA...CTTTAAAAGTGATAACACAGGGCAAGGGAGACAGCTCAGTAATAAAGAGCATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR CAA 90 bp | GTGAGTAAGATTATATTCATCCCACAGAACTTGCCATCTCTGTTGTaGGGTGGTGAACTATCTTTTGAAAATAACTTTGATAGAGATATG | + |
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Preference number: 2 (lower is better) Translates to: VSKIIFIPQNLPSLL*GGELSFENNFDRDM Trigger: CATATCTCTATCAAAGTTATTTTCAAAAGATAGTTCACCACCCAACAACAGAGATGGCAAGTTCTGTGGGATGAATATAATCTTACTCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR CAA 90 bp | ACAGTGAGTAAGATTATATTCATCCCACAGAACTTGCCATCTCTGTaGTTGGGTGGTGAACTATCTTTTGAAAATAACTTTGATAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: TVSKIIFIPQNLPSL*LGGELSFENNFDRD Trigger: ATCTCTATCAAAGTTATTTTCAAAAGATAGTTCACCACCCAACAACAGAGATGGCAAGTTCTGTGGGATGAATATAATCTTACTCACTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGGCAAATCTCATGAATGCTGACACGACTCATTGTTCAAAAAGCAATTTAAGACAACTTCCTTTTTaGTTTGTTCTCTCCAATACT | + |
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Preference number: 2 (lower is better) Translates to: TVANLMNADTTHCSKSNLRQLPF*FVLSNT Trigger: AGTATTGGAGAGAACAAAGCAAAAAGGAAGTTGTCT...TAAATTGCTTTTTGAACAATGAGTCGTGTCAGCATTCATGAGATTTGCCACAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGGCAAATCTCATGAATGCTGACACGACTCATTGTTCAAAAAGCAATTTATTCATTGAACAAAGATaGAAGAAGTCACTCATCATG | + |
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Preference number: 2 (lower is better) Translates to: TVANLMNADTTHCSKSNLFIEQR*KKSLIM Trigger: CATGATGAGTGACTTCTTCCATCTTTGTTCAATGAA...TAAATTGCTTTTTGAACAATGAGTCGTGTCAGCATTCATGAGATTTGCCACAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR CCA 72 bp | AGAGTTGCAGACAGCTGTGAGCTGACATGTGGGTGCTaGGGATCAGACTCAGGTCCTCTGGAAGAGCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: RVADSCELTCGC*GSDSGPLEEQQ Trigger: TTGCTGCTCTTCCAGAGGACCTGAGTCTGATCCCCAGCACCCACATGTCAGCTCACAGCTGTCTGCAACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTTGAGTTCAGTCCCCAACACCACACAGACTGGGTGTGGTAGTATATGCCTGCCAGCACTTGGGAGGTaGAAGCAGGAGGATCATCCT | + |
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Preference number: 3 (lower is better) Translates to: ALSSVPNTTQTGCGSICLPALGR*KQEDHP Trigger: AGGATGATCCTCCTGCTTCAACCTCCCAAGTGCTGG...CAGGCATATACTACCACACCCAGTCTGTGTGGTGTTGGGGACTGAACTCAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR TCA 72 bp | AGATCCCTTGGAATAGAGTTGCAGACAGCTGTGAGCTaGCATGTGGGTGCTGGGGATCAGACTCAGGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: RSLGIELQTAVS*HVGAGDQTQVL Trigger: GAGGACCTGAGTCTGATCCCCAGCACCCACATGTCAGCTCACAGCTGTCTGCAACTCTATTCCAAGGGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR GCA 72 bp | GGGGATCAGACTCAGGTCCTCTGGAAGAGCAGCAAATaGTCTTTATTACTGAGCTGTCTCCCTTGCCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: GDQTQVLWKSSK*SLLLSCLPCPV Trigger: CACAGGGCAAGGGAGACAGCTCAGTAATAAAGAGCATTTGCTGCTCTTCCAGAGGACCTGAGTCTGATCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR-3UTR CAA 90 bp | AGCTGTCCTGTGACTCTTTTTGTAGGGCAGGCTGGTTTTGGACTCAGAGATCCAAACATGTATGAAGCCTaGAGTTCAGTCCCCAACACC | + |
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Preference number: 3 (lower is better) Translates to: SCPVTLFVGQAGFGLRDPNMYEA*SSVPNT Trigger: GGTGTTGGGGACTGAACTCAAGGCTTCATACATGTT...TGGATCTCTGAGTCCAAAACCAGCCTGCCCTACAAAAAGAGTCACAGGACAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTCTCTGTGTAACCCTAGCTGTCCTGTGACTCTTTTTGTAGGGCAGGCTGGTCAGACAACTTCCTTTTaGCTTTGTTCTCTCCAATAC | + |
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Preference number: 3 (lower is better) Translates to: VSLCNPSCPVTLFVGQAGQTTSF*LCSLQY Trigger: GTATTGGAGAGAACAAAGCAAAAAGGAAGTTGTCTG...ACCAGCCTGCCCTACAAAAAGAGTCACAGGACAGCTAGGGTTACACAGAGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR TCA 72 bp | TATGGTGTGGAGCTTTTGCCACTGTGGCAAATCTCATaGATGCTGACACGACTCATTGTTCAAAAAGCAATT | + |
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Preference number: 3 (lower is better) Translates to: YGVELLPLWQIS*MLTRLIVQKAI Trigger: AATTGCTTTTTGAACAATGAGTCGTGTCAGCATTCATGAGATTTGCCACAGTGGCAAAAGCTCCACACCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR GCA 72 bp | AAGGCCAACCAAAGGGCAGTGAAAATTAGACACATATaGAGACAATTCTGGATTGGCAGTGTAATACTCTTC | + |
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Preference number: 3 (lower is better) Translates to: KANQRAVKIRHI*RQFWIGSVILF Trigger: GAAGAGTATTACACTGCCAATCCAGAATTGTCTGCATATGTGTCTAATTTTCACTGCCCTTTGGTTGGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR CCA 72 bp | AGGGCAGTGAAAATTAGACACATATGCAGACAATTCTaGATTGGCAGTGTAATACTCTTCTGGAGGTCTATA | + |
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Preference number: 3 (lower is better) Translates to: RAVKIRHICRQF*IGSVILFWRSI Trigger: TATAGACCTCCAGAAGAGTATTACACTGCCAATCCAGAATTGTCTGCATATGTGTCTAATTTTCACTGCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR GCA 72 bp | AGCAGCAAATGCTCTTTATTACTGAGCTGTCTCCCTTaGCCTGTGTTATCACTTTTAAAGCACATTAATTTG | + |
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Preference number: 3 (lower is better) Translates to: SSKCSLLLSCLP*PVLSLLKHINL Trigger: CAAATTAATGTGCTTTAAAAGTGATAACACAGGGCAAGGGAGACAGCTCAGTAATAAAGAGCATTTGCTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR-3UTR CAA 90 bp | AAATGCTCTTTATTACTGAGCTGTCTCCCTTGCCCTGTGTTATCACTTTTAAAGACATTCAGAGCCTCTTaGTGTTACATTTTACCAAAC | + |
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Preference number: 3 (lower is better) Translates to: KCSLLLSCLPCPVLSLLKTFRAS*CYILPN Trigger: GTTTGGTAAAATGTAACACAAAGAGGCTCTGAATGT...CTTTAAAAGTGATAACACAGGGCAAGGGAGACAGCTCAGTAATAAAGAGCATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR TCA 72 bp | TTTGGTCAATATTTTAGAGTATGTGAGCATTACCAATaGAACTATACAAGGAGACACAGCAGATTCCATGGG | + |
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Preference number: 3 (lower is better) Translates to: FGQYFRVCEHYQ*NYTRRHSRFHG Trigger: CCCATGGAATCTGCTGTGTCTCCTTGTATAGTTTCATTGGTAATGCTCACATACTCTAAAATATTGACCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR TCA 72 bp | TGGAGCTTTTGCCACTGTGGCAAATCTCATGAATGCTaGCACGACTCATTGTTCAAAAAGCAATTTATTAAA | + |
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Preference number: 3 (lower is better) Translates to: WSFCHCGKSHEC*HDSLFKKQFIK Trigger: TTTAATAAATTGCTTTTTGAACAATGAGTCGTGTCAGCATTCATGAGATTTGCCACAGTGGCAAAAGCTCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR CCA 72 bp | CACAAGAGGTCTGTATGTGAGAATTACTTCAGCAGTTaGTCTTTAAAATCTAAGGATTACTTTCCTTATTCA | + |
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Preference number: 3 (lower is better) Translates to: HKRSVCENYFSS*SLKSKDYFPYS Trigger: TGAATAAGGAAAGTAATCCTTAGATTTTAAAGACCAACTGCTGAAGTAATTCTCACATACAGACCTCTTGTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR CCA 72 bp | TTATATTCATCCCACAGAACTTGCCATCTCTGTTGTTaGGTGGTGAACTATCTTTTGAAAATAACTTTGATA | + |
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Preference number: 3 (lower is better) Translates to: LYSSHRTCHLCC*VVNYLLKITLI Trigger: TATCAAAGTTATTTTCAAAAGATAGTTCACCACCCAACAACAGAGATGGCAAGTTCTGTGGGATGAATATAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| CDS-3UTR TCA 90 bp | TGCTTTGTGCCCTTGGGGCCAGAGAAGAACATCAGATCCCTTGGAATAGAGTTGCTACACAAGCTATCCTaGCCATGGCTGGCAACTCAC | + |
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Preference number: 4 (lower is better) Translates to: CFVPLGPEKNIRSLGIELLHKLS*PWLATH Trigger: GTGAGTTGCCAGCCATGGTCAGGATAGCTTGTGTAG...CAACTCTATTCCAAGGGATCTGATGTTCTTCTCTGGCCCCAAGGGCACAAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| CDS-3UTR CCA 90 bp | AGCTGTCCTGTGACTCTTTTTGTAGGGCAGGCTGGTTTTGGACTCAGAGATCCAGTGAGGAACTTGCCCTaGTCCTTAGAGGCCCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: SCPVTLFVGQAGFGLRDPVRNLP*SLEALL Trigger: TAACAGGGCCTCTAAGGACCAGGGCAAGTTCCTCAC...TGGATCTCTGAGTCCAAAACCAGCCTGCCCTACAAAAAGAGTCACAGGACAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| CDS-3UTR TCA 90 bp | GAAAAGATGGCTATGCACCACACGTGTGCTTTGTGCCCTTGGGGCCAGAGAAGAAAGTTAACCAGCATCTaGGGGACAATGCTTGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: EKMAMHHTCALCPWGQRRKLTSI*GTMLVV Trigger: CACAACAAGCATTGTCCCTCAGATGCTGGTTAACTT...TCTTCTCTGGCCCCAAGGGCACAAAGCACACGTGTGGTGCATAGCCATCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| CDS-3UTR GCA 90 bp | GATGGCTATGCACCACACGTGTGCTTTGTGCCCTTGGGGCCAGAGAAGAACATCTCCACAGGTATTCATTaGTTTTTGTTGCCCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: DGYAPHVCFVPLGPEKNISTGIH*FLLPCL Trigger: AAGGCAGGGCAACAAAAAGCAATGAATACCTGTGGA...GATGTTCTTCTCTGGCCCCAAGGGCACAAAGCACACGTGTGGTGCATAGCCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| CDS-3UTR CCA 90 bp | GCCTTGAGTTCAGTCCCCAACACCACACAGACTGGGTGTGGTAGTATATGCCTGGAGGGGGTTGAGACTTaGAGTGATGATGGTGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: ALSSVPNTTQTGCGSICLEGVET*SDDGVK Trigger: TTTTACACCATCATCACTCCAAGTCTCAACCCCCTC...CAGGCATATACTACCACACCCAGTCTGTGTGGTGTTGGGGACTGAACTCAAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| CDS-3UTR TCA 90 bp | AGCTGTCCTGTGACTCTTTTTGTAGGGCAGGCTGGTTTTGGACTCAGAGATCCAGAGGCAAATTCACAGTaGGTGTGCATAATATTACAG | + |
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Preference number: 4 (lower is better) Translates to: SCPVTLFVGQAGFGLRDPEANSQ*VCIILQ Trigger: CTGTAATATTATGCACACTCACTGTGAATTTGCCTC...TGGATCTCTGAGTCCAAAACCAGCCTGCCCTACAAAAAGAGTCACAGGACAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR CAA 72 bp | AGTATAAGTTGTAGAGTGCTTAACATGTATGAAGCCTaGAGTTCAGTCCCCAACACCACACAGACTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SISCRVLNMYEA*SSVPNTTQTGC Trigger: ACACCCAGTCTGTGTGGTGTTGGGGACTGAACTCAAGGCTTCATACATGTTAAGCACTCTACAACTTATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| CDS-3UTR TCA 90 bp | AAATGCTCTTTATTACTGAGCTGTCTCCCTTGCCCTGTGTTATCACTTTTAAAGTTGTTGCCCTGCCTTTaGCTTCATGTTGAGCACAGT | + |
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Preference number: 4 (lower is better) Translates to: KCSLLLSCLPCPVLSLLKLLPCL*LHVEHS Trigger: ACTGTGCTCAACATGAAGTCAAAGGCAGGGCAACAA...CTTTAAAAGTGATAACACAGGGCAAGGGAGACAGCTCAGTAATAAAGAGCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| CDS-3UTR CCA 90 bp | AAATGCTCTTTATTACTGAGCTGTCTCCCTTGCCCTGTGTTATCACTTTTAAAGAACTCACACAGGAAGTaGTCCAGGATGTTGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: KCSLLLSCLPCPVLSLLKNSHRK*SRMLCP Trigger: TGGACACAACATCCTGGACCACTTCCTGTGTGAGTT...CTTTAAAAGTGATAACACAGGGCAAGGGAGACAGCTCAGTAATAAAGAGCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| CDS-3UTR TCA 90 bp | AAATGCTCTTTATTACTGAGCTGTCTCCCTTGCCCTGTGTTATCACTTTTAAAGGGACAATGCTTGTTGTaGAACACAAATCCAGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: KCSLLLSCLPCPVLSLLKGQCLL*NTNPGK Trigger: CTTTCCTGGATTTGTGTTTCACAACAAGCATTGTCC...CTTTAAAAGTGATAACACAGGGCAAGGGAGACAGCTCAGTAATAAAGAGCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| CDS-3UTR TCA 90 bp | AAATGCTCTTTATTACTGAGCTGTCTCCCTTGCCCTGTGTTATCACTTTTAAAGCCTTTGACTTCATGTTaGGCACAGTTTTGGCTATGT | + |
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Preference number: 4 (lower is better) Translates to: KCSLLLSCLPCPVLSLLKPLTSC*AQFWLC Trigger: ACATAGCCAAAACTGTGCTCAACATGAAGTCAAAGG...CTTTAAAAGTGATAACACAGGGCAAGGGAGACAGCTCAGTAATAAAGAGCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR CAA 72 bp | ACAACAGTGAGTAAGATTATATTCATCCCACAGAACTaGCCATCTCTGTTGTTGGGTGGTGAACTATCTTTT | + |
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Preference number: 4 (lower is better) Translates to: TTVSKIIFIPQN*PSLLLGGELSF Trigger: AAAAGATAGTTCACCACCCAACAACAGAGATGGCAAGTTCTGTGGGATGAATATAATCTTACTCACTGTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| CDS-3UTR TCA 90 bp | ACTGTGGCAAATCTCATGAATGCTGACACGACTCATTGTTCAAAAAGCAATTTAATAGACGTGGATTCATaGTTACAAAGTAATGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: TVANLMNADTTHCSKSNLIDVDS*LQSNAR Trigger: CCTTGCATTACTTTGTAATCATGAATCCACGTCTAT...TAAATTGCTTTTTGAACAATGAGTCGTGTCAGCATTCATGAGATTTGCCACAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR CAA 72 bp | ATTATATTCATCCCACAGAACTTGCCATCTCTGTTGTaGGGTGGTGAACTATCTTTTGAAAATAACTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: IIFIPQNLPSLL*GGELSFENNFD Trigger: ATCAAAGTTATTTTCAAAAGATAGTTCACCACCCAACAACAGAGATGGCAAGTTCTGTGGGATGAATATAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| 3UTR CAA 72 bp | AAGATTATATTCATCCCACAGAACTTGCCATCTCTGTaGTTGGGTGGTGAACTATCTTTTGAAAATAACTTT | + |
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Preference number: 4 (lower is better) Translates to: KIIFIPQNLPSL*LGGELSFENNF Trigger: AAAGTTATTTTCAAAAGATAGTTCACCACCCAACAACAGAGATGGCAAGTTCTGTGGGATGAATATAATCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| CDS-3UTR CAA 90 bp | GTTTCTCTGTGTAACCCTAGCTGTCCTGTGACTCTTTTTGTAGGGCAGGCTGGTAAGAGGGTGAGGAACTaGCCCTGGTCCTTAGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: VSLCNPSCPVTLFVGQAGKRVRN*PWSLEA Trigger: GGCCTCTAAGGACCAGGGCAAGTTCCTCACCCTCTT...ACCAGCCTGCCCTACAAAAAGAGTCACAGGACAGCTAGGGTTACACAGAGAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| CDS-3UTR CAA 90 bp | GAAAAGATGGCTATGCACCACACGTGTGCTTTGTGCCCTTGGGGCCAGAGAAGAGCCTTTGACTTCATGTaGAGCACAGTTTTGGCTATG | + |
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Preference number: 5 (lower is better) Translates to: EKMAMHHTCALCPWGQRRAFDFM*STVLAM Trigger: CATAGCCAAAACTGTGCTCAACATGAAGTCAAAGGC...TCTTCTCTGGCCCCAAGGGCACAAAGCACACGTGTGGTGCATAGCCATCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| CDS TCA 90 bp | GAGATGGGATCCACAGGTATTCATTGCTTTTTGTTGCCCTGCCTTTaGCTTCATGTTGAGCACAGTTTTGGCTATGTAGCCATAGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: EMGSTGIHCFLLPCL*LHVEHSFGYVAIGN Trigger: ATTTCCTATGGCTACATAGCCAAAACTGTGCTCAACATGAAGTCAAAGGCAGGGCAACAAAAAGCAATGAATACCTGTGGATCCCATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096006.3 ENSMUST00000215804.2 |
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| CDS-3UTR CAA 90 bp | CAGAACTTGCCATCTCTGTTGTTGGGTGGTGAACTATCTTTTGAAAATAACTTTCAGACAATTCAACTGTaGTCGTGTCTACACAAGCTA | + |
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Preference number: 5 (lower is better) Translates to: QNLPSLLLGGELSFENNFQTIQL*SCLHKL Trigger: TAGCTTGTGTAGACACGACAACAGTTGAATTGTCTG...AAAGTTATTTTCAAAAGATAGTTCACCACCCAACAACAGAGATGGCAAGTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| CDS-3UTR CAA 90 bp | ACTGTGGCAAATCTCATGAATGCTGACACGACTCATTGTTCAAAAAGCAATTTACATAATATTACAGAGTaGGCCAAACTAATACCCCAG | + |
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Preference number: 5 (lower is better) Translates to: TVANLMNADTTHCSKSNLHNITE*AKLIPQ Trigger: CTGGGGTATTAGTTTGGCCAACTCTGTAATATTATG...TAAATTGCTTTTTGAACAATGAGTCGTGTCAGCATTCATGAGATTTGCCACAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215804.2 |
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| CDS TCA 72 bp | TCCACAGGTATTCATTGCTTTTTGTTGCCCTGCCTTTaGCTTCATGTTGAGCACAGTTTTGGCTATGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: STGIHCFLLPCL*LHVEHSFGYVA Trigger: GGCTACATAGCCAAAACTGTGCTCAACATGAAGTCAAAGGCAGGGCAACAAAAAGCAATGAATACCTGTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096006.3 ENSMUST00000215804.2 |
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| CDS GCA 72 bp | GTGAGATGGGATCCACAGGTATTCATTGCTTTTTGTTaGCCTGCCTTTGACTTCATGTTGAGCACAGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: VRWDPQVFIAFC*PAFDFMLSTVL Trigger: CAAAACTGTGCTCAACATGAAGTCAAAGGCAGGGCAACAAAAAGCAATGAATACCTGTGGATCCCATCTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096006.3 ENSMUST00000215804.2 |
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| CDS CAA 90 bp | CCACATCGAGGCAAATTCACAGTGAGTGTGCATAATATTACAGAGTaGGCCAAACTAATACCCCAGACCATGACTATCATCTTGACGCAT | + |
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Preference number: 6 (lower is better) Translates to: PHRGKFTVSVHNITE*AKLIPQTMTIILTH Trigger: ATGCGTCAAGATGATAGTCATGGTCTGGGGTATTAGTTTGGCCAACTCTGTAATATTATGCACACTCACTGTGAATTTGCCTCGATGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096006.3 ENSMUST00000215804.2 |
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