Pregenerated sensors for OLFR259 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075160Ensembl transcript IDs: ENSMUST00000099862.2, ENSMUST00000213978.2, ENSMUST00000215828.3, ENSMUST00000216088.3
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGAGAAGGAAATATCACATGGGTGTATGTAGTTTGGGAATTAAATaGTCAGAGGGAACATTCTGGATTCTCCAGCTAGAAGAAGGCATA | + |
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Preference number: 1 (lower is better) Translates to: ERRKYHMGVCSLGIK*SEGTFWILQLEEGI Trigger: TATGCCTTCTTCTAGCTGGAGAATCCAGAATGTTCCCTCTGATCATTTAATTCCCAAACTACATACACCCATGTGATATTTCCTTCTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR CCA 90 bp | GTGTTCATGAAAGTAAAGTGTGGAGAGAGAGAAGGAAATATCACATaGGTGTATGTAGTTTGGGAATTAAATGATCAGAGGGAACATTCT | + |
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Preference number: 1 (lower is better) Translates to: VFMKVKCGEREGNIT*VYVVWELNDQREHS Trigger: AGAATGTTCCCTCTGATCATTTAATTCCCAAACTACATACACCCATGTGATATTTCCTTCTCTCTCTCCACACTTTACTTTCATGAACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR CAA 90 bp | TGTCTGAGATCTGGAATGTCTGCTGAGAGTGTAAATATCAGTTTTTaGGCCTCATGTTCAGGAATAGTTGACCACCATGCAATGAACTGC | + |
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Preference number: 2 (lower is better) Translates to: CLRSGMSAESVNISF*ASCSGIVDHHAMNC Trigger: GCAGTTCATTGCATGGTGGTCAACTATTCCTGAACATGAGGCCAAAAAACTGATATTTACACTCTCAGCAGACATTCCAGATCTCAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR-3UTR TCA 90 bp | TTCTATCTGTTGCTGGAGGAAGTTGAGTCTTCTCTGTTCATCAGAGGAGCATTGTTGACCACCATGCAATaGACTGCATTGTTTTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: FYLLLEEVESSLFIRGALLTTMQ*TALFCF Trigger: AAAACAAAACAATGCAGTTCATTGCATGGTGGTCAA...CAATGCTCCTCTGATGAACAGAGAAGACTCAACTTCCTCCAGCAACAGATAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR CAA 90 bp | CACTTTCTAATTGTAGCTGTGGAGATCTATATTTGTTTCTATCTGTaGCTGGAGGAAGTTGAGTCTTCTCTGTTCATCAGAGGAGCATTG | + |
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Preference number: 2 (lower is better) Translates to: HFLIVAVEIYICFYL*LEEVESSLFIRGAL Trigger: CAATGCTCCTCTGATGAACAGAGAAGACTCAACTTCCTCCAGCAACAGATAGAAACAAATATAGATCTCCACAGCTACAATTAGAAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR CAA 90 bp | TACAACTCAGTAACTAATGTGAAGTTGATATCTGTCGTGCGTGCCTaGGAACCACTTAATGGTAGAAATTCAGGTAAATTGGCAGCAATA | + |
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Preference number: 2 (lower is better) Translates to: YNSVTNVKLISVVRA*EPLNGRNSGKLAAI Trigger: TATTGCTGCCAATTTACCTGAATTTCTACCATTAAGTGGTTCCAAGGCACGCACGACAGATATCAACTTCACATTAGTTACTGAGTTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR-3UTR TCA 90 bp | TTGTCAAATACACAGTATCAGAAGAAGAGGCATAAAATTTCGTTAGAGCCAGAGTTGACCACCATGCAATaGACTGCATTGTTTTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: LSNTQYQKKRHKISLEPELTTMQ*TALFCF Trigger: AAAACAAAACAATGCAGTTCATTGCATGGTGGTCAA...CTCTGGCTCTAACGAAATTTTATGCCTCTTCTTCTGATACTGTGTATTTGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR CCA 72 bp | AGGAAGTTGAGTCTTCTCTGTTCATCAGAGGAGCATTaGTCTATGAGAACAGGAACTGCGATTATGGGTCAT | + |
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Preference number: 3 (lower is better) Translates to: RKLSLLCSSEEH*SMRTGTAIMGH Trigger: ATGACCCATAATCGCAGTTCCTGTTCTCATAGACCAATGCTCCTCTGATGAACAGAGAAGACTCAACTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR-3UTR CAA 90 bp | TTCTATCTGTTGCTGGAGGAAGTTGAGTCTTCTCTGTTCATCAGAGGAGCATTGGATTCAAGATCTTGTTaGGTTAGGCATTGTCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: FYLLLEEVESSLFIRGALDSRSC*VRHCQK Trigger: TTTCTGACAATGCCTAACCAAACAAGATCTTGAATC...CAATGCTCCTCTGATGAACAGAGAAGACTCAACTTCCTCCAGCAACAGATAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR-3UTR CAA 90 bp | TTCTATCTGTTGCTGGAGGAAGTTGAGTCTTCTCTGTTCATCAGAGGAGCATTGTTCTTGTATCTCCTCTaGGTTTTGTTTCCTTCTACT | + |
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Preference number: 3 (lower is better) Translates to: FYLLLEEVESSLFIRGALFLYLL*VLFPST Trigger: AGTAGAAGGAAACAAAACCAAGAGGAGATACAAGAA...CAATGCTCCTCTGATGAACAGAGAAGACTCAACTTCCTCCAGCAACAGATAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR TCA 72 bp | GATCTATATTTGTTTCTATCTGTTGCTGGAGGAAGTTaGGTCTTCTCTGTTCATCAGAGGAGCATTGGTCTA | + |
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Preference number: 3 (lower is better) Translates to: DLYLFLSVAGGS*VFSVHQRSIGL Trigger: TAGACCAATGCTCCTCTGATGAACAGAGAAGACTCAACTTCCTCCAGCAACAGATAGAAACAAATATAGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR-3UTR CAA 90 bp | ATTTGTTTCTATCTGTTGCTGGAGGAAGTTGAGTCTTCTCTGTTCATCAGAGGATTCTTGTATCTCCTCTaGGTTTTGTTTCCTTCTACT | + |
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Preference number: 3 (lower is better) Translates to: ICFYLLLEEVESSLFIRGFLYLL*VLFPST Trigger: AGTAGAAGGAAACAAAACCAAGAGGAGATACAAGAA...TCCTCTGATGAACAGAGAAGACTCAACTTCCTCCAGCAACAGATAGAAACAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR CCA 72 bp | GAGAGAGAAGGAAATATCACATGGGTGTATGTAGTTTaGGAATTAAATGATCAGAGGGAACATTCTGGATTC | + |
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Preference number: 3 (lower is better) Translates to: EREGNITWVYVV*ELNDQREHSGF Trigger: GAATCCAGAATGTTCCCTCTGATCATTTAATTCCCAAACTACATACACCCATGTGATATTTCCTTCTCTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR-3UTR CAA 90 bp | TTGTCAAATACACAGTATCAGAAGAAGAGGCATAAAATTTCGTTAGAGCCAGAGGATTCAAGATCTTGTTaGGTTAGGCATTGTCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: LSNTQYQKKRHKISLEPEDSRSC*VRHCQK Trigger: TTTCTGACAATGCCTAACCAAACAAGATCTTGAATC...CTCTGGCTCTAACGAAATTTTATGCCTCTTCTTCTGATACTGTGTATTTGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR-3UTR CAA 90 bp | ATGAGCTACCTAATCTTAAGTTCTTGTCAAATACACAGTATCAGAAGAAGAGGCTTCTTGTATCTCCTCTaGGTTTTGTTTCCTTCTACT | + |
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Preference number: 3 (lower is better) Translates to: MSYLILSSCQIHSIRRRGFLYLL*VLFPST Trigger: AGTAGAAGGAAACAAAACCAAGAGGAGATACAAGAA...GCCTCTTCTTCTGATACTGTGTATTTGACAAGAACTTAAGATTAGGTAGCTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR CAA 72 bp | GAGGAAGTTGAGTCTTCTCTGTTCATCAGAGGAGCATaGGTCTATGAGAACAGGAACTGCGATTATGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: EEVESSLFIRGA*VYENRNCDYGS Trigger: TGACCCATAATCGCAGTTCCTGTTCTCATAGACCAATGCTCCTCTGATGAACAGAGAAGACTCAACTTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR GCA 90 bp | ATTTGTTTCTATCTGTTGCTGGAGGAAGTTGAGTCTTCTCTGTTCATCAGAGGAGCCACCCAAGTAACTTaGAAGTACCATTTGAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: ICFYLLLEEVESSLFIRGATQVT*KYHLSA Trigger: TGCACTCAAATGGTACTTGCAAGTTACTTGGGTGGC...TCCTCTGATGAACAGAGAAGACTCAACTTCCTCCAGCAACAGATAGAAACAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR CAA 72 bp | TCTGGAATGTCTGCTGAGAGTGTAAATATCAGTTTTTaGGCCTCATGTTCAGGAATAGTTGACCACCATGCA | + |
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Preference number: 4 (lower is better) Translates to: SGMSAESVNISF*ASCSGIVDHHA Trigger: TGCATGGTGGTCAACTATTCCTGAACATGAGGCCAAAAAACTGATATTTACACTCTCAGCAGACATTCCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR TCA 90 bp | ATTTGTTTCTATCTGTTGCTGGAGGAAGTTGAGTCTTCTCTGTTCATCAGAGGAAATAGCAAACACACCTaGGAAGACCAAAAGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: ICFYLLLEEVESSLFIRGNSKHT*EDQKQH Trigger: ATGCTGCTTTTGGTCTTCTCAGGTGTGTTTGCTATT...TCCTCTGATGAACAGAGAAGACTCAACTTCCTCCAGCAACAGATAGAAACAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR TCA 90 bp | TTGTCAAATACACAGTATCAGAAGAAGAGGCATAAAATTTCGTTAGAGCCAGAGAAAGCAGCATCTCATTaGTGTGTGCATCAGAGCATG | + |
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Preference number: 4 (lower is better) Translates to: LSNTQYQKKRHKISLEPEKAASH*CVHQSM Trigger: CATGCTCTGATGCACACATCAATGAGATGCTGCTTT...CTCTGGCTCTAACGAAATTTTATGCCTCTTCTTCTGATACTGTGTATTTGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR CCA 90 bp | AAATCTCTACTCACATCCAGATCCACTCCACTTCTCTCTGTCATTAAGAAACTAGCTTTTCCTGTTCCATaGAGTATTGAGAACTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: KSLLTSRSTPLLSVIKKLAFPVP*SIENLA Trigger: AGCCAAGTTCTCAATACTCCATGGAACAGGAAAAGC...TAGTTTCTTAATGACAGAGAGAAGTGGAGTGGATCTGGATGTGAGTAGAGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR CAA 72 bp | AGATCTATATTTGTTTCTATCTGTTGCTGGAGGAAGTaGAGTCTTCTCTGTTCATCAGAGGAGCATTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: RSIFVSICCWRK*SLLCSSEEHWS Trigger: AGACCAATGCTCCTCTGATGAACAGAGAAGACTCAACTTCCTCCAGCAACAGATAGAAACAAATATAGATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR TCA 90 bp | ATTTGTTTCTATCTGTTGCTGGAGGAAGTTGAGTCTTCTCTGTTCATCAGAGGACACAGAAGTCTAGTTTaGGTAAACCTATTGTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: ICFYLLLEEVESSLFIRGHRSLV*VNLLCE Trigger: TTCACACAATAGGTTTACTCAAACTAGACTTCTGTG...TCCTCTGATGAACAGAGAAGACTCAACTTCCTCCAGCAACAGATAGAAACAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR TCA 90 bp | AAGAAAAACTATAGATCCTCTCAGATTCAAGATCTTGTTTGGTTAGGCATTGTCAAAGCAGCATCTCATTaGTGTGTGCATCAGAGCATG | + |
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Preference number: 4 (lower is better) Translates to: KKNYRSSQIQDLVWLGIVKAASH*CVHQSM Trigger: CATGCTCTGATGCACACATCAATGAGATGCTGCTTT...GACAATGCCTAACCAAACAAGATCTTGAATCTGAGAGGATCTATAGTTTTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR GCA 90 bp | ATTTGTTTCTATCTGTTGCTGGAGGAAGTTGAGTCTTCTCTGTTCATCAGAGGAAAAAAGAGAGGAACCTaGCAATTAGGGTTTTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: ICFYLLLEEVESSLFIRGKKRGT*QLGFSV Trigger: AACAGAAAACCCTAATTGGCAGGTTCCTCTCTTTTT...TCCTCTGATGAACAGAGAAGACTCAACTTCCTCCAGCAACAGATAGAAACAAAT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR GCA 90 bp | AAGAAAAACTATAGATCCTCTCAGATTCAAGATCTTGTTTGGTTAGGCATTGTCGCCACCCAAGTAACTTaGAAGTACCATTTGAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: KKNYRSSQIQDLVWLGIVATQVT*KYHLSA Trigger: TGCACTCAAATGGTACTTGCAAGTTACTTGGGTGGC...GACAATGCCTAACCAAACAAGATCTTGAATCTGAGAGGATCTATAGTTTTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR CCA 90 bp | ATGAGCTACCTAATCTTAAGTTCTTGTCAAATACACAGTATCAGAAGAAGAGGCGCTTTTCCTGTTCCATaGAGTATTGAGAACTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: MSYLILSSCQIHSIRRRGAFPVP*SIENLA Trigger: AGCCAAGTTCTCAATACTCCATGGAACAGGAAAAGC...GCCTCTTCTTCTGATACTGTGTATTTGACAAGAACTTAAGATTAGGTAGCTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR CAA 72 bp | ATTGTAGCTGTGGAGATCTATATTTGTTTCTATCTGTaGCTGGAGGAAGTTGAGTCTTCTCTGTTCATCAGA | + |
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Preference number: 4 (lower is better) Translates to: IVAVEIYICFYL*LEEVESSLFIR Trigger: TCTGATGAACAGAGAAGACTCAACTTCCTCCAGCAACAGATAGAAACAAATATAGATCTCCACAGCTACAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| 3UTR CAA 72 bp | GTAACTAATGTGAAGTTGATATCTGTCGTGCGTGCCTaGGAACCACTTAATGGTAGAAATTCAGGTAAATTG | + |
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Preference number: 4 (lower is better) Translates to: VTNVKLISVVRA*EPLNGRNSGKL Trigger: CAATTTACCTGAATTTCTACCATTAAGTGGTTCCAAGGCACGCACGACAGATATCAACTTCACATTAGTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR GCA 90 bp | AAATCTCTACTCACATCCAGATCCACTCCACTTCTCTCTGTCATTAAGAAACTAAAAAAGAGAGGAACCTaGCAATTAGGGTTTTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: KSLLTSRSTPLLSVIKKLKKRGT*QLGFSV Trigger: AACAGAAAACCCTAATTGGCAGGTTCCTCTCTTTTT...TAGTTTCTTAATGACAGAGAGAAGTGGAGTGGATCTGGATGTGAGTAGAGATTT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR CCA 90 bp | AAGAAAAACTATAGATCCTCTCAGATTCAAGATCTTGTTTGGTTAGGCATTGTCGCTTTTCCTGTTCCATaGAGTATTGAGAACTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: KKNYRSSQIQDLVWLGIVAFPVP*SIENLA Trigger: AGCCAAGTTCTCAATACTCCATGGAACAGGAAAAGC...GACAATGCCTAACCAAACAAGATCTTGAATCTGAGAGGATCTATAGTTTTTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR TCA 90 bp | TTGTCAAATACACAGTATCAGAAGAAGAGGCATAAAATTTCGTTAGAGCCAGAGCACAGAAGTCTAGTTTaGGTAAACCTATTGTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: LSNTQYQKKRHKISLEPEHRSLV*VNLLCE Trigger: TTCACACAATAGGTTTACTCAAACTAGACTTCTGTG...CTCTGGCTCTAACGAAATTTTATGCCTCTTCTTCTGATACTGTGTATTTGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR GCA 90 bp | ATGAGCTACCTAATCTTAAGTTCTTGTCAAATACACAGTATCAGAAGAAGAGGCAAAAAGAGAGGAACCTaGCAATTAGGGTTTTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: MSYLILSSCQIHSIRRRGKKRGT*QLGFSV Trigger: AACAGAAAACCCTAATTGGCAGGTTCCTCTCTTTTT...GCCTCTTCTTCTGATACTGTGTATTTGACAAGAACTTAAGATTAGGTAGCTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR CAA 90 bp | TTCTATCTGTTGCTGGAGGAAGTTGAGTCTTCTCTGTTCATCAGAGGAGCATTGGGCCACCCAAGTAACTaGCAAGTACCATTTGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: FYLLLEEVESSLFIRGALGHPSN*QVPFEC Trigger: GCACTCAAATGGTACTTGCAAGTTACTTGGGTGGCC...CAATGCTCCTCTGATGAACAGAGAAGACTCAACTTCCTCCAGCAACAGATAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR CAA 90 bp | AAATCTCTACTCACATCCAGATCCACTCCACTTCTCTCTGTCATTAAGAAACTAGGCCACCCAAGTAACTaGCAAGTACCATTTGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: KSLLTSRSTPLLSVIKKLGHPSN*QVPFEC Trigger: GCACTCAAATGGTACTTGCAAGTTACTTGGGTGGCC...TAGTTTCTTAATGACAGAGAGAAGTGGAGTGGATCTGGATGTGAGTAGAGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS TCA 90 bp | ATAGGACACCATGACAATGATGAAAGTGGAAATAGCAAACACACCTaGGAAGACCAAAAGCAGCATCTCATTGATGTGTGCATCAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: IGHHDNDESGNSKHT*EDQKQHLIDVCIRA Trigger: TGCTCTGATGCACACATCAATGAGATGCTGCTTTTGGTCTTCTCAGGTGTGTTTGCTATTTCCACTTTCATCATTGTCATGGTGTCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099862.2 ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR CAA 90 bp | ATGAGCTACCTAATCTTAAGTTCTTGTCAAATACACAGTATCAGAAGAAGAGGCGGCCACCCAAGTAACTaGCAAGTACCATTTGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: MSYLILSSCQIHSIRRRGGHPSN*QVPFEC Trigger: GCACTCAAATGGTACTTGCAAGTTACTTGGGTGGCC...GCCTCTTCTTCTGATACTGTGTATTTGACAAGAACTTAAGATTAGGTAGCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR CAA 90 bp | ATTTGTTTCTATCTGTTGCTGGAGGAAGTTGAGTCTTCTCTGTTCATCAGAGGACTGTTCCATGGAGTATaGAGAACTTGGCTGGATATA | + |
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Preference number: 5 (lower is better) Translates to: ICFYLLLEEVESSLFIRGLFHGV*RTWLDI Trigger: TATATCCAGCCAAGTTCTCAATACTCCATGGAACAG...TCCTCTGATGAACAGAGAAGACTCAACTTCCTCCAGCAACAGATAGAAACAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR CAA 90 bp | AAATCTCTACTCACATCCAGATCCACTCCACTTCTCTCTGTCATTAAGAAACTACTGTTCCATGGAGTATaGAGAACTTGGCTGGATATA | + |
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Preference number: 5 (lower is better) Translates to: KSLLTSRSTPLLSVIKKLLFHGV*RTWLDI Trigger: TATATCCAGCCAAGTTCTCAATACTCCATGGAACAG...TAGTTTCTTAATGACAGAGAGAAGTGGAGTGGATCTGGATGTGAGTAGAGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS GCA 90 bp | ACCTATTGTGTGAATCATGGAATTTATGAGGCCACCCAAGTAACTTaGAAGTACCATTTGAGTGCAGATGTTGTTTGTCATGATAACAGT | + |
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Preference number: 5 (lower is better) Translates to: TYCVNHGIYEATQVT*KYHLSADVVCHDNS Trigger: ACTGTTATCATGACAAACAACATCTGCACTCAAATGGTACTTGCAAGTTACTTGGGTGGCCTCATAAATTCCATGATTCACACAATAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099862.2 ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR CAA 90 bp | ATTTGTTTCTATCTGTTGCTGGAGGAAGTTGAGTCTTCTCTGTTCATCAGAGGAAATGATTCACAATGTTaGGACCACAGAAGTCTAGTT | + |
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Preference number: 5 (lower is better) Translates to: ICFYLLLEEVESSLFIRGNDSQC*DHRSLV Trigger: AACTAGACTTCTGTGGTCCAAACATTGTGAATCATT...TCCTCTGATGAACAGAGAAGACTCAACTTCCTCCAGCAACAGATAGAAACAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS-3UTR CAA 90 bp | AAGAAAAACTATAGATCCTCTCAGATTCAAGATCTTGTTTGGTTAGGCATTGTCAATGATTCACAATGTTaGGACCACAGAAGTCTAGTT | + |
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Preference number: 5 (lower is better) Translates to: KKNYRSSQIQDLVWLGIVNDSQC*DHRSLV Trigger: AACTAGACTTCTGTGGTCCAAACATTGTGAATCATT...GACAATGCCTAACCAAACAAGATCTTGAATCTGAGAGGATCTATAGTTTTTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS CAA 72 bp | GCAAACACACCTGAGAAGACCAAAAGCAGCATCTCATaGATGTGTGCATCAGAGCATGCAAGCTTCAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: ANTPEKTKSSIS*MCASEHASFKR Trigger: TCTTTTGAAGCTTGCATGCTCTGATGCACACATCAATGAGATGCTGCTTTTGGTCTTCTCAGGTGTGTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099862.2 ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS TCA 72 bp | CATGACAATGATGAAAGTGGAAATAGCAAACACACCTaGGAAGACCAAAAGCAGCATCTCATTGATGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: HDNDESGNSKHT*EDQKQHLIDVC Trigger: GCACACATCAATGAGATGCTGCTTTTGGTCTTCTCAGGTGTGTTTGCTATTTCCACTTTCATCATTGTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099862.2 ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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| CDS CCA 72 bp | AGAGAGCTTTTCCTGTTCCATGGAGTATTGAGAACTTaGCTGGATATAGTTAAATGTCAAAGATCCATAAAA | + |
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Preference number: 6 (lower is better) Translates to: RELFLFHGVLRT*LDIVKCQRSIK Trigger: TTTTATGGATCTTTGACATTTAACTATATCCAGCCAAGTTCTCAATACTCCATGGAACAGGAAAAGCTCTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099862.2 ENSMUST00000213978.2 ENSMUST00000215828.3 ENSMUST00000216088.3 |
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