Pregenerated sensors for OLFR251 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096757Ensembl transcript IDs: ENSMUST00000072731.4, ENSMUST00000214865.2
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGGCCGTTGTTCTTGTGAAGATCATATGCCCCAGTACAGGGAAATaGTGGAGCCAGGAAGAAGGAGTGGGTGAGTTGGGGAGCAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: VAVVLVKIICPSTGK*WSQEEGVGELGSRE Trigger: CTCCCTGCTCCCCAACTCACCCACTCCTTCTTCCTGGCTCCAGCATTTCCCTGTACTGGGGCATATGATCTTCACAAGAACAACGGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR GCA 90 bp | CATTCATTAATTGGAAGAGTGGCCGTTGTTCTTGTGAAGATCATATaGCCCAGTACAGGGAAATGCTGGAGCCAGGAAGAAGGAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: HSLIGRVAVVLVKII*PSTGKCWSQEEGVG Trigger: ACCCACTCCTTCTTCCTGGCTCCAGCATTTCCCTGTACTGGGGCATATGATCTTCACAAGAACAACGGCCACTCTTCCAATTAATGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR TCA 90 bp | CAACCACCAAACTCAGACACTATTGCATGTGCCAGCATGATTAACTaGAAGGACCTTGATATAGCTATATATGAGAGGCTATGTCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: QPPNSDTIACASMIN*KDLDIAIYERLCQC Trigger: GCACTGACATAGCCTCTCATATATAGCTATATCAAGGTCCTTTCAGTTAATCATGCTGGCACATGCAATAGTGTCTGAGTTTGGTGGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR TCA 90 bp | CATAATATTCGCTGCCCTAAGAATATTTTACTAGTAAGTGGTCCCTaGAGGAAGAAGGTATTATGTAGATCTAATTGCTTACCAGTTACA | + |
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Preference number: 1 (lower is better) Translates to: HNIRCPKNILLVSGP*RKKVLCRSNCLPVT Trigger: TGTAACTGGTAAGCAATTAGATCTACATAATACCTTCTTCCTTCAGGGACCACTTACTAGTAAAATATTCTTAGGGCAGCGAATATTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGCCGTTGTTCTTGTGAAGATCATATGCCCCAGTACAGGGAAATGCTGGAGCGTTACAGTGATTCAGTaGACCATTTTCCACCATGGG | + |
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Preference number: 2 (lower is better) Translates to: VAVVLVKIICPSTGKCWSVTVIQ*TIFHHG Trigger: CCCATGGTGGAAAATGGTTCACTGAATCACTGTAAC...GCTCCAGCATTTCCCTGTACTGGGGCATATGATCTTCACAAGAACAACGGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGCCGTTGTTCTTGTGAAGATCATATGCCCCAGTACAGGGAAATGCTGGAGCCATTCTGGAGCAATATaGAGAGGAAAACAACTGATG | + |
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Preference number: 2 (lower is better) Translates to: VAVVLVKIICPSTGKCWSHSGAI*RGKQLM Trigger: CATCAGTTGTTTTCCTCTTCATATTGCTCCAGAATG...GCTCCAGCATTTCCCTGTACTGGGGCATATGATCTTCACAAGAACAACGGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGCCGTTGTTCTTGTGAAGATCATATGCCCCAGTACAGGGAAATGCTGGAGCAAGGATAACATGTTCTaGACAGATTCCAGTCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: VAVVLVKIICPSTGKCWSKDNMF*TDSSLV Trigger: CACAAGACTGGAATCTGTTCAGAACATGTTATCCTT...GCTCCAGCATTTCCCTGTACTGGGGCATATGATCTTCACAAGAACAACGGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR TCA 90 bp | GTACATTTTAGGTTTGGGGTTTGCACACCTGACCCTGTGTCCTTAAGAAATGTTCTATTGCCTCAGAGCTaGAACAGTCTCTCCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: VHFRFGVCTPDPVSLRNVLLPQS*NSLSWW Trigger: CCACCAGGAGAGACTGTTTCAGCTCTGAGGCAATAG...AACATTTCTTAAGGACACAGGGTCAGGTGTGCAAACCCCAAACCTAAAATGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGCCGTTGTTCTTGTGAAGATCATATGCCCCAGTACAGGGAAATGCTGGAGCAATAAAGCAATGCAGTaGGGCAGGACTATAAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: VAVVLVKIICPSTGKCWSNKAMQ*GRTIKA Trigger: TGCTTTTATAGTCCTGCCCCACTGCATTGCTTTATT...GCTCCAGCATTTCCCTGTACTGGGGCATATGATCTTCACAAGAACAACGGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR TCA 90 bp | GTACATTTTAGGTTTGGGGTTTGCACACCTGACCCTGTGTCCTTAAGAAATGTTGCTTACCAGTTACAGTaGTTCAGTGAACCATTTTCC | + |
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Preference number: 2 (lower is better) Translates to: VHFRFGVCTPDPVSLRNVAYQLQ*FSEPFS Trigger: GGAAAATGGTTCACTGAATCACTGTAACTGGTAAGC...AACATTTCTTAAGGACACAGGGTCAGGTGTGCAAACCCCAAACCTAAAATGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR TCA 90 bp | ACACAGAAACTTAGACTACCCAAGATACAATTTGTGAAACACATGAAACTCAAGTGGGGTTTGCACACCTaGCCCTGTGTCCTTAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: TQKLRLPKIQFVKHMKLKWGLHT*PCVLKK Trigger: TTTCTTAAGGACACAGGGTCAGGTGTGCAAACCCCA...CTTGAGTTTCATGTGTTTCACAAATTGTATCTTGGGTAGTCTAAGTTTCTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR CCA 90 bp | GTACATTTTAGGTTTGGGGTTTGCACACCTGACCCTGTGTCCTTAAGAAATGTTCAGATTCCAGTCTTGTaGACACACACAAAAGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: VHFRFGVCTPDPVSLRNVQIPVL*THTKEN Trigger: ATTTTCTTTTGTGTGTGTCCACAAGACTGGAATCTG...AACATTTCTTAAGGACACAGGGTCAGGTGTGCAAACCCCAAACCTAAAATGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR GCA 90 bp | ACACAGAAACTTAGACTACCCAAGATACAATTTGTGAAACACATGAAACTCAAGCTTGTGAAGATCATATaGCCCAGTACAGGGAAATGC | + |
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Preference number: 2 (lower is better) Translates to: TQKLRLPKIQFVKHMKLKLVKII*PSTGKC Trigger: GCATTTCCCTGTACTGGGGCATATGATCTTCACAAG...CTTGAGTTTCATGTGTTTCACAAATTGTATCTTGGGTAGTCTAAGTTTCTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR TCA 90 bp | ACACAGAAACTTAGACTACCCAAGATACAATTTGTGAAACACATGAAACTCAAGCTAGTAAGTGGTCCCTaGAGGAAGAAGGTATTATGT | + |
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Preference number: 2 (lower is better) Translates to: TQKLRLPKIQFVKHMKLKLVSGP*RKKVLC Trigger: ACATAATACCTTCTTCCTTCAGGGACCACTTACTAG...CTTGAGTTTCATGTGTTTCACAAATTGTATCTTGGGTAGTCTAAGTTTCTGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR CCA 90 bp | ACACAGAAACTTAGACTACCCAAGATACAATTTGTGAAACACATGAAACTCAAGTCGTCATTCATTAATTaGAAGAGTGGCCGTTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: TQKLRLPKIQFVKHMKLKSSFIN*KSGRCS Trigger: AGAACAACGGCCACTCTTCCAATTAATGAATGACGA...CTTGAGTTTCATGTGTTTCACAAATTGTATCTTGGGTAGTCTAAGTTTCTGTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR CCA 90 bp | ACACAGAAACTTAGACTACCCAAGATACAATTTGTGAAACACATGAAACTCAAGCATTCCTTCTTAGAATaGGGAACAAAATACCCATGG | + |
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Preference number: 2 (lower is better) Translates to: TQKLRLPKIQFVKHMKLKHSFLE*GTKYPW Trigger: CCATGGGTATTTTGTTCCCCATTCTAAGAAGGAATG...CTTGAGTTTCATGTGTTTCACAAATTGTATCTTGGGTAGTCTAAGTTTCTGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR GCA 90 bp | ACACAGAAACTTAGACTACCCAAGATACAATTTGTGAAACACATGAAACTCAAGTTATTCAGTCTGCCATaGCTGTGCCACTTTAATATT | + |
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Preference number: 2 (lower is better) Translates to: TQKLRLPKIQFVKHMKLKLFSLP*LCHFNI Trigger: AATATTAAAGTGGCACAGGCATGGCAGACTGAATAA...CTTGAGTTTCATGTGTTTCACAAATTGTATCTTGGGTAGTCTAAGTTTCTGTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR CCA 90 bp | ACACAGAAACTTAGACTACCCAAGATACAATTTGTGAAACACATGAAACTCAAGTATTTTACTAGTAAGTaGTCCCTGAAGGAAGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: TQKLRLPKIQFVKHMKLKYFTSK*SLKEEG Trigger: ACCTTCTTCCTTCAGGGACCACTTACTAGTAAAATA...CTTGAGTTTCATGTGTTTCACAAATTGTATCTTGGGTAGTCTAAGTTTCTGTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR GCA 90 bp | ACACAGAAACTTAGACTACCCAAGATACAATTTGTGAAACACATGAAACTCAAGGTCCTTAAGAAATGTTaGAAGTCAACTAGAACATGT | + |
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Preference number: 2 (lower is better) Translates to: TQKLRLPKIQFVKHMKLKVLKKC*KSTRTC Trigger: ACATGTTCTAGTTGACTTGCAACATTTCTTAAGGAC...CTTGAGTTTCATGTGTTTCACAAATTGTATCTTGGGTAGTCTAAGTTTCTGTGT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR CCA 90 bp | ACACAGAAACTTAGACTACCCAAGATACAATTTGTGAAACACATGAAACTCAAGATAAAGAGTTTACAGTaGAAATCTTTTCCAGACCCT | + |
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Preference number: 2 (lower is better) Translates to: TQKLRLPKIQFVKHMKLKIKSLQ*KSFPDP Trigger: AGGGTCTGGAAAAGATTTCCACTGTAAACTCTTTAT...CTTGAGTTTCATGTGTTTCACAAATTGTATCTTGGGTAGTCTAAGTTTCTGTGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR GCA 72 bp | GTTCTTGTGAAGATCATATGCCCCAGTACAGGGAAATaGTGGAGCCAGGAAGAAGGAGTGGGTGAGTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: VLVKIICPSTGK*WSQEEGVGELG Trigger: CCCCAACTCACCCACTCCTTCTTCCTGGCTCCAGCATTTCCCTGTACTGGGGCATATGATCTTCACAAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGCCGTTGTTCTTGTGAAGATCATATGCCCCAGTACAGGGAAATGCTGGAGCAGGTACATATTACCCTaGGCCCTGAGATTCAAACTC | + |
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Preference number: 3 (lower is better) Translates to: VAVVLVKIICPSTGKCWSRYILP*ALRFKL Trigger: GAGTTTGAATCTCAGGGCCAAGGGTAATATGTACCT...GCTCCAGCATTTCCCTGTACTGGGGCATATGATCTTCACAAGAACAACGGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGCCGTTGTTCTTGTGAAGATCATATGCCCCAGTACAGGGAAATGCTGGAGCAGTCTTGATCTGTTATaGGCAGTGATCAACATTCTG | + |
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Preference number: 3 (lower is better) Translates to: VAVVLVKIICPSTGKCWSSLDLL*AVINIL Trigger: CAGAATGTTGATCACTGCCAATAACAGATCAAGACT...GCTCCAGCATTTCCCTGTACTGGGGCATATGATCTTCACAAGAACAACGGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGCCGTTGTTCTTGTGAAGATCATATGCCCCAGTACAGGGAAATGCTGGAGCTCCCCAGAAAAAGTCTaGTACCATATACACAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: VAVVLVKIICPSTGKCWSSPEKV*YHIHKG Trigger: TCCTTTGTGTATATGGTACAAGACTTTTTCTGGGGA...GCTCCAGCATTTCCCTGTACTGGGGCATATGATCTTCACAAGAACAACGGCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR CCA 72 bp | ACCAGTTACAGTGATTCAGTGAACCATTTTCCACCATaGGCTAGGCTTATGGGCGATGCAGGAGTACTTAGA | + |
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Preference number: 3 (lower is better) Translates to: TSYSDSVNHFPP*ARLMGDAGVLR Trigger: TCTAAGTACTCCTGCATCGCCCATAAGCCTAGCCCATGGTGGAAAATGGTTCACTGAATCACTGTAACTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGCTGAAACAGTCTCTCCTGGTGGGAAAGGCAAGGTTCCTGATATTCAGGCACTGACTTGTGTTCAGTaGTTTCTTTGGTCTGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: RAETVSPGGKGKVPDIQALTCVQ*FLWSVF Trigger: AAAAACAGACCAAAGAAACAACTGAACACAAGTCAG...TGCCTGAATATCAGGAACCTTGCCTTTCCCACCAGGAGAGACTGTTTCAGCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR CCA 72 bp | ATGAGAGGCTATGTCAGTGCCTGGCAAATACAGAAGTaGATGCTCACAGTCATCTATTGGATGGAACACAAA | + |
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Preference number: 3 (lower is better) Translates to: MRGYVSAWQIQK*MLTVIYWMEHK Trigger: TTTGTGTTCCATCCAATAGATGACTGTGAGCATCCACTTCTGTATTTGCCAGGCACTGACATAGCCTCTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR GCA 72 bp | GACCTTGATATAGCTATATATGAGAGGCTATGTCAGTaGCTGGCAAATACAGAAGTGGATGCTCACAGTCAT | + |
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Preference number: 3 (lower is better) Translates to: DLDIAIYERLCQ*LANTEVDAHSH Trigger: ATGACTGTGAGCATCCACTTCTGTATTTGCCAGGCACTGACATAGCCTCTCATATATAGCTATATCAAGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR CAA 90 bp | GTACATTTTAGGTTTGGGGTTTGCACACCTGACCCTGTGTCCTTAAGAAATGTTGAACAGATTCCAGTCTaGTGGACACACACAAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: VHFRFGVCTPDPVSLRNVEQIPV*WTHTKE Trigger: TTCTTTTGTGTGTGTCCACAAGACTGGAATCTGTTC...AACATTTCTTAAGGACACAGGGTCAGGTGTGCAAACCCCAAACCTAAAATGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR TCA 72 bp | CCTATTCAGATGTCAGGTACATATTACCCTTGGCCCTaGGATTCAAACTCAAACAGAAGCATGTATGCACTT | + |
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Preference number: 3 (lower is better) Translates to: PIQMSGTYYPWP*DSNSNRSMYAL Trigger: AAGTGCATACATGCTTCTGTTTGAGTTTGAATCTCAGGGCCAAGGGTAATATGTACCTGACATCTGAATAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR GCA 72 bp | ATAATTTCCAGGTGGGTACCTCGATCTGCCTATAGTTaGAGTACTCATAAGGCAGAGACAGGATATTTTAAG | + |
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Preference number: 3 (lower is better) Translates to: IISRWVPRSAYS*STHKAETGYFK Trigger: CTTAAAATATCCTGTCTCTGCCTTATGAGTACTGCAACTATAGGCAGATCGAGGTACCCACCTGGAAATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR CAA 90 bp | GTACATTTTAGGTTTGGGGTTTGCACACCTGACCCTGTGTCCTTAAGAAATGTTATTATCAAAATTGTGTaGGTAGACAAGGCTGGTAGC | + |
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Preference number: 3 (lower is better) Translates to: VHFRFGVCTPDPVSLRNVIIKIV*VDKAGS Trigger: GCTACCAGCCTTGTCTACCAACACAATTTTGATAAT...AACATTTCTTAAGGACACAGGGTCAGGTGTGCAAACCCCAAACCTAAAATGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR CAA 90 bp | ACACAGAAACTTAGACTACCCAAGATACAATTTGTGAAACACATGAAACTCAAGGGGTATAGGGGACTTTaGGGATGGCATTTGAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: TQKLRLPKIQFVKHMKLKGYRGL*GWHLKC Trigger: ACACTTCAAATGCCATCCCAAAAGTCCCCTATACCC...CTTGAGTTTCATGTGTTTCACAAATTGTATCTTGGGTAGTCTAAGTTTCTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR TCA 72 bp | AACTCAGACACTATTGCATGTGCCAGCATGATTAACTaGAAGGACCTTGATATAGCTATATATGAGAGGCTA | + |
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Preference number: 3 (lower is better) Translates to: NSDTIACASMIN*KDLDIAIYERL Trigger: TAGCCTCTCATATATAGCTATATCAAGGTCCTTTCAGTTAATCATGCTGGCACATGCAATAGTGTCTGAGTT 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR TCA 72 bp | AGGCAAATGGATGGATCTAGAGGATATCATCCTGTGTaGGGTTACCCAATCACAAAAGAACACACATTATTT | + |
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Preference number: 3 (lower is better) Translates to: RQMDGSRGYHPV*GYPITKEHTLF Trigger: AAATAATGTGTGTTCTTTTGTGATTGGGTAACCTCACACAGGATGATATCCTCTAGATCCATCCATTTGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR-3UTR CAA 90 bp | ACACAGAAACTTAGACTACCCAAGATACAATTTGTGAAACACATGAAACTCAAGTCCAAACTAGCTATATaGCTGAGCTCAGACATCAAC | + |
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Preference number: 3 (lower is better) Translates to: TQKLRLPKIQFVKHMKLKSKLAI*LSSDIN Trigger: GTTGATGTCTGAGCTCAGCAATATAGCTAGTTTGGA...CTTGAGTTTCATGTGTTTCACAAATTGTATCTTGGGTAGTCTAAGTTTCTGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR TCA 72 bp | AAGTCTTGTACCATATACACAAAGGATAACATGTTCTaGACAGATTCCAGTCTTGTGGACACACACAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: KSCTIYTKDNMF*TDSSLVDTHKR Trigger: TCTTTTGTGTGTGTCCACAAGACTGGAATCTGTTCAGAACATGTTATCCTTTGTGTATATGGTACAAGACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR TCA 72 bp | CGCTGCCCTAAGAATATTTTACTAGTAAGTGGTCCCTaGAGGAAGAAGGTATTATGTAGATCTAATTGCTTA | + |
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Preference number: 3 (lower is better) Translates to: RCPKNILLVSGP*RKKVLCRSNCL Trigger: TAAGCAATTAGATCTACATAATACCTTCTTCCTTCAGGGACCACTTACTAGTAAAATATTCTTAGGGCAGCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| CDS-3UTR TCA 90 bp | GTACATTTTAGGTTTGGGGTTTGCACACCTGACCCTGTGTCCTTAAGAAATGTTAAGTACATGGGAGTGTaGAGATGTGAATTTAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: VHFRFGVCTPDPVSLRNVKYMGV*RCEFRQ Trigger: TTGCCTAAATTCACATCTTCACACTCCCATGTACTT...AACATTTCTTAAGGACACAGGGTCAGGTGTGCAAACCCCAAACCTAAAATGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| CDS-3UTR TCA 90 bp | CTGTCACTATCACATCAACTAGACTTCTGTGAGCAACAACACAAAATTCATTGTCTAGTACAAGAGAGCTaGAGGAGGGGAAAGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: LSLSHQLDFCEQQHKIHCLVQES*RRGKMS Trigger: TGACATCTTTCCCCTCCTTCAGCTCTCTTGTACTAG...ACAATGAATTTTGTGTTGTTGCTCACAGAAGTCTAGTTGATGTGATAGTGACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| CDS-3UTR TCA 90 bp | CTGTCACTATCACATCAACTAGACTTCTGTGAGCAACAACACAAAATTCATTGTATCATAAACCCTGTATaGGTCAGGGCACCAGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: LSLSHQLDFCEQQHKIHCIINPV*VRAPAK Trigger: TTTTGCTGGTGCCCTGACTCATACAGGGTTTATGAT...ACAATGAATTTTGTGTTGTTGCTCACAGAAGTCTAGTTGATGTGATAGTGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| CDS-3UTR CCA 90 bp | ACACAGAAACTTAGACTACCCAAGATACAATTTGTGAAACACATGAAACTCAAGGGTTTCCTACCACAGTaGCTGTGTAGTTTAACAAGA | + |
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Preference number: 4 (lower is better) Translates to: TQKLRLPKIQFVKHMKLKGFLPQ*LCSLTR Trigger: TCTTGTTAAACTACACAGCCACTGTGGTAGGAAACC...CTTGAGTTTCATGTGTTTCACAAATTGTATCTTGGGTAGTCTAAGTTTCTGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| CDS-3UTR CCA 90 bp | ACACAGAAACTTAGACTACCCAAGATACAATTTGTGAAACACATGAAACTCAAGAGTCTCAGCAGATGTTaGCTTGATATAGGCAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: TQKLRLPKIQFVKHMKLKSLSRC*LDIGKQ Trigger: TTGCTTGCCTATATCAAGCCAACATCTGCTGAGACT...CTTGAGTTTCATGTGTTTCACAAATTGTATCTTGGGTAGTCTAAGTTTCTGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| CDS-3UTR CCA 90 bp | ACACAGAAACTTAGACTACCCAAGATACAATTTGTGAAACACATGAAACTCAAGGATAAAAATTTCCCCTaGTCCACAGTCTCAGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: TQKLRLPKIQFVKHMKLKDKNFP*STVSAD Trigger: ATCTGCTGAGACTGTGGACCAGGGGAAATTTTTATC...CTTGAGTTTCATGTGTTTCACAAATTGTATCTTGGGTAGTCTAAGTTTCTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR CAA 72 bp | ATAAAGAAAAACCACAGACTCAGTCTTGATCTGTTATaGGCAGTGATCAACATTCTGGAGCAATATGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: IKKNHRLSLDLL*AVINILEQYEE Trigger: CTCTTCATATTGCTCCAGAATGTTGATCACTGCCAATAACAGATCAAGACTGAGTCTGTGGTTTTTCTTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR CAA 72 bp | TTTGGTACCCTGTGTAGAATAACTGAATGTTTATCCTaGTGTCCCCAGAAAAAGTCTTGTACCATATACACA | + |
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Preference number: 4 (lower is better) Translates to: FGTLCRITECLS*CPQKKSCTIYT Trigger: TGTGTATATGGTACAAGACTTTTTCTGGGGACACAAGGATAAACATTCAGTTATTCTACACAGGGTACCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| CDS-3UTR TCA 90 bp | ACACAGAAACTTAGACTACCCAAGATACAATTTGTGAAACACATGAAACTCAAGGTGAATTTAGGCAAATaGGATTCATTAAGCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: TQKLRLPKIQFVKHMKLKVNLGK*DSLSSG Trigger: ACCTGAGCTTAATGAATCTCATTTGCCTAAATTCAC...CTTGAGTTTCATGTGTTTCACAAATTGTATCTTGGGTAGTCTAAGTTTCTGTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR CAA 72 bp | AATAAGGCAATCAGATTGTGTATTATCAAAATTGTGTaGGTAGACAAGGCTGGTAGCATTCTTAGAGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: NKAIRLCIIKIV*VDKAGSILRVL Trigger: CAAAACTCTAAGAATGCTACCAGCCTTGTCTACCAACACAATTTTGATAATACACAATCTGATTGCCTTATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| 3UTR CAA 72 bp | GTGACAATTACAGCTCAATTCAATAAGGCAATCAGATaGTGTATTATCAAAATTGTGTTGGTAGACAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: VTITAQFNKAIR*CIIKIVLVDKA Trigger: AGCCTTGTCTACCAACACAATTTTGATAATACACAATCTGATTGCCTTATTGAATTGAGCTGTAATTGTCAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| CDS-3UTR GCA 90 bp | ACACAGAAACTTAGACTACCCAAGATACAATTTGTGAAACACATGAAACTCAAGAAAATAGTTGACTCATaGATCCTTCATAGGATATGG | + |
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Preference number: 4 (lower is better) Translates to: TQKLRLPKIQFVKHMKLKKIVDS*ILHRIW Trigger: CCATATCCTATGAAGGATGCATGAGTCAACTATTTT...CTTGAGTTTCATGTGTTTCACAAATTGTATCTTGGGTAGTCTAAGTTTCTGTGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| CDS-3UTR CAA 90 bp | GTGGCCGTTGTTCTTGTGAAGATCATATGCCCCAGTACAGGGAAATGCTGGAGCTCAATGCAGGACAGATaGAAGATGAAAAAGTACATG | + |
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Preference number: 5 (lower is better) Translates to: VAVVLVKIICPSTGKCWSSMQDR*KMKKYM Trigger: CATGTACTTTTTCATCTTCAATCTGTCCTGCATTGA...GCTCCAGCATTTCCCTGTACTGGGGCATATGATCTTCACAAGAACAACGGCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214865.2 |
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| CDS TCA 90 bp | CCACAAGTGCCCAGGGCTTTTGACCAACCCTTACTTGATGACATATaGAGGATATTGGAAAGGATCATAGCATATGAGACTAAAATAATG | + |
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Preference number: 5 (lower is better) Translates to: PQVPRAFDQPLLDDI*RILERIIAYETKIM Trigger: CATTATTTTAGTCTCATATGCTATGATCCTTTCCAATATCCTTCATATGTCATCAAGTAAGGGTTGGTCAAAAGCCCTGGGCACTTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072731.4 ENSMUST00000214865.2 |
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| CDS TCA 72 bp | CTACCACAGTGGCTGTGTAGTTTAACAAGAATAGGATaGACAGAGGCAACTGGAGCTCTTTTTGAACTGTTA | + |
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Preference number: 6 (lower is better) Translates to: LPQWLCSLTRIG*TEATGALFELL Trigger: TAACAGTTCAAAAAGAGCTCCAGTTGCCTCTGTTCATCCTATTCTTGTTAAACTACACAGCCACTGTGGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072731.4 ENSMUST00000214865.2 |
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