Pregenerated sensors for OLFR247 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095608Ensembl transcript IDs: ENSMUST00000170920.2, ENSMUST00000215871.3
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTTTGTAATTCCAGACTTTTAAGACTAAGAAGTGAAAACCATGGATCCACGTCCGTGATAAAGGAATCATaGGGAGTTGGAGAAACTCTG | + |
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Preference number: 2 (lower is better) Translates to: LCNSRLLRLRSENHGSTSVIKES*GVGETL Trigger: CAGAGTTTCTCCAACTCCTCATGATTCCTTTATCAC...GGACGTGGATCCATGGTTTTCACTTCTTAGTCTTAAAAGTCTGGAATTACAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215871.3 |
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| 3UTR-3UTR CCA 90 bp | TCGAGGGATGGAAAGAGATTTCTCAACCTTCTAGGATCAAACGTTAAACAAATTGGAATCATGAGGAGTTaGAGAAACTCTGTACTGTGG | + |
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Preference number: 2 (lower is better) Translates to: SRDGKRFLNLLGSNVKQIGIMRS*RNSVLW Trigger: CCACAGTACAGAGTTTCTCCAACTCCTCATGATTCC...AATTTGTTTAACGTTTGATCCTAGAAGGTTGAGAAATCTCTTTCCATCCCTCGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215871.3 |
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| 3UTR-3UTR CAA 90 bp | CTTTGTAATTCCAGACTTTTAAGACTAAGAAGTGAAAACCATGGATCCACGTCCAGGAATCATGAGGAGTaGGAGAAACTCTGTACTGTG | + |
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Preference number: 3 (lower is better) Translates to: LCNSRLLRLRSENHGSTSRNHEE*EKLCTV Trigger: CACAGTACAGAGTTTCTCCAACTCCTCATGATTCCT...GGACGTGGATCCATGGTTTTCACTTCTTAGTCTTAAAAGTCTGGAATTACAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215871.3 |
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| 3UTR TCA 72 bp | AAAACCATGGATCCACGTCCTAACAGGGATATAGAGTaGGTTCAAGATTTATCTGAAAGTTCAAGTAAAAAG | + |
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Preference number: 3 (lower is better) Translates to: KTMDPRPNRDIE*VQDLSESSSKK Trigger: CTTTTTACTTGAACTTTCAGATAAATCTTGAACTCACTCTATATCCCTGTTAGGACGTGGATCCATGGTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215871.3 |
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| CDS-3UTR GCA 90 bp | TCGAGGGATGGAAAGAGATTTCTCAACCTTCTAGGATCAAACGTTAAACAAATTCTGAGCTGCACAGCCTaGCACACTTATGGTCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: SRDGKRFLNLLGSNVKQILSCTA*HTYGLE Trigger: CTCAAGACCATAAGTGTGGCAGGCTGTGCAGCTCAG...AATTTGTTTAACGTTTGATCCTAGAAGGTTGAGAAATCTCTTTCCATCCCTCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215871.3 |
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| CDS-3UTR TCA 90 bp | CAAACAGGAATTCCTGACTATTTACACAAATCTATTCTAGTCAAGAGCAATCGAGTGTCTGCCTGCTGCTaGGGGCATTTTCAAGATGGT | + |
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Preference number: 4 (lower is better) Translates to: QTGIPDYLHKSILVKSNRVSACC*GHFQDG Trigger: ACCATCTTGAAAATGCCCTCAGCAGCAGGCAGACAC...TCGATTGCTCTTGACTAGAATAGATTTGTGTAAATAGTCAGGAATTCCTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215871.3 |
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| CDS-3UTR GCA 90 bp | CAAACAGGAATTCCTGACTATTTACACAAATCTATTCTAGTCAAGAGCAATCGACCCAGTCATCCAAGATaGACCAGCCAACTTCAGACA | + |
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Preference number: 4 (lower is better) Translates to: QTGIPDYLHKSILVKSNRPSHPR*TSQLQT Trigger: TGTCTGAAGTTGGCTGGTGCATCTTGGATGACTGGG...TCGATTGCTCTTGACTAGAATAGATTTGTGTAAATAGTCAGGAATTCCTGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215871.3 |
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| CDS-3UTR TCA 90 bp | CTTTGTAATTCCAGACTTTTAAGACTAAGAAGTGAAAACCATGGATCCACGTCCCTCTGTGTTACCTTTTaGAAGGCTTCTTTCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: LCNSRLLRLRSENHGSTSLCVTF*KASFTS Trigger: AGAAGTGAAAGAAGCCTTTCAAAAGGTAACACAGAG...GGACGTGGATCCATGGTTTTCACTTCTTAGTCTTAAAAGTCTGGAATTACAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215871.3 |
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| CDS-3UTR GCA 90 bp | CAAACAGGAATTCCTGACTATTTACACAAATCTATTCTAGTCAAGAGCAATCGAACAAAGAGGACAAGCTaGAGCTCTGCTAGAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: QTGIPDYLHKSILVKSNRTKRTS*SSAREE Trigger: TTCTTCTCTAGCAGAGCTGCAGCTTGTCCTCTTTGT...TCGATTGCTCTTGACTAGAATAGATTTGTGTAAATAGTCAGGAATTCCTGTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215871.3 |
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| CDS TCA 90 bp | TCCTGCTCCACAAAAGGGCAGAGTGAAGATCCAGGTGGTCTGGGCTaGTTCTACCAGGATCCCAGTCATCCAAGATGCACCAGCCAACTT | + |
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Preference number: 5 (lower is better) Translates to: SCSTKGQSEDPGGLG*FYQDPSHPRCTSQL Trigger: AAGTTGGCTGGTGCATCTTGGATGACTGGGATCCTGGTAGAATCAGCCCAGACCACCTGGATCTTCACTCTGCCCTTTTGTGGAGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170920.2 ENSMUST00000215871.3 |
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| CDS CCA 90 bp | ATTGTTCCTGCTCCACAAAAGGGCAGAGTGAAGATCCAGGTGGTCTaGGCTGATTCTACCAGGATCCCAGTCATCCAAGATGCACCAGCC | + |
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Preference number: 5 (lower is better) Translates to: IVPAPQKGRVKIQVV*ADSTRIPVIQDAPA Trigger: GGCTGGTGCATCTTGGATGACTGGGATCCTGGTAGAATCAGCCCAGACCACCTGGATCTTCACTCTGCCCTTTTGTGGAGCAGGAACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170920.2 ENSMUST00000215871.3 |
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| CDS-3UTR CAA 90 bp | CTTTGTAATTCCAGACTTTTAAGACTAAGAAGTGAAAACCATGGATCCACGTCCCCTCTGTGTTACCTTTaGAAAGGCTTCTTTCACTTC | + |
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Preference number: 5 (lower is better) Translates to: LCNSRLLRLRSENHGSTSPLCYL*KGFFHF Trigger: GAAGTGAAAGAAGCCTTTCAAAAGGTAACACAGAGG...GGACGTGGATCCATGGTTTTCACTTCTTAGTCTTAAAAGTCTGGAATTACAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215871.3 |
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| CDS CCA 72 bp | GCTCCACAAAAGGGCAGAGTGAAGATCCAGGTGGTCTaGGCTGATTCTACCAGGATCCCAGTCATCCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: APQKGRVKIQVV*ADSTRIPVIQD Trigger: ATCTTGGATGACTGGGATCCTGGTAGAATCAGCCCAGACCACCTGGATCTTCACTCTGCCCTTTTGTGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170920.2 ENSMUST00000215871.3 |
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| CDS GCA 72 bp | TGTCAGCCCCAAGATGGTGAATACATACATCTGAGCTaGACAGCCTGCCACACTTATGGTCTTGAGCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: CQPQDGEYIHLS*TACHTYGLELY Trigger: GTACAGCTCAAGACCATAAGTGTGGCAGGCTGTGCAGCTCAGATGTATGTATTCACCATCTTGGGGCTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170920.2 ENSMUST00000215871.3 |
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