Pregenerated sensors for OLFR243 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094822Ensembl transcript IDs: ENSMUST00000098194.2, ENSMUST00000215723.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGAGCTGGTGAAGTTTATGGTAGCACGCTGGGAAGAGAAGTGCTaGGAAGAGCCAAGATGCTTTGATAGGTACTTGCAATGCTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: QELVKFMVARWEEKC*EEPRCFDRYLQCWQ Trigger: CTGCCAGCATTGCAAGTACCTATCAAAGCATCTTGGCTCTTCTCAGCACTTCTCTTCCCAGCGTGCTACCATAAACTTCACCAGCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR GCA 90 bp | TTACCTGGCAACAGCCAGGTATGCCTAACTCAGTGTAAAAGGGACTaGTTGCCTACTCTTGCTCTCTTGTTCCTCTCTTGCTCTTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: LPGNSQVCLTQCKRD*LPTLALLFLSCSFS Trigger: AGAGAAAGAGCAAGAGAGGAACAAGAGAGCAAGAGTAGGCAAGCAGTCCCTTTTACACTGAGTTAGGCATACCTGGCTGTTGCCAGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR GCA 90 bp | GGGAAGAGAAGTGCTGAGAAGAGCCAAGATGCTTTGATAGGTACTTaGAATGCTGGCAGATGCTGGGAGAAACTAGCATCTCCTTTGATA | + |
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Preference number: 1 (lower is better) Translates to: GKRSAEKSQDALIGT*NAGRCWEKLASPLI Trigger: TATCAAAGGAGATGCTAGTTTCTCCCAGCATCTGCCAGCATTGCAAGTACCTATCAAAGCATCTTGGCTCTTCTCAGCACTTCTCTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR TCA 90 bp | GGTCAGTTAGACTTTTATCCTAGATTTCCTCAGGAACTAAGAGCCTaGGACAGTGAAGAATTGCTACCTGATTTCCCTTACTCATTTTAC | + |
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Preference number: 1 (lower is better) Translates to: GQLDFYPRFPQELRA*DSEELLPDFPYSFY Trigger: GTAAAATGAGTAAGGGAAATCAGGTAGCAATTCTTCACTGTCTCAGGCTCTTAGTTCCTGAGGAAATCTAGGATAAAAGTCTAACTGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR GCA 90 bp | GGAGCAAAGGTTTGGGTTGTCAAGACAGCTCAGTTGTTAAGCTCTTaGTGTTCAAACTTGAATTCAATTCCTTGGAATCTATGTAAAAAG | + |
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Preference number: 1 (lower is better) Translates to: GAKVWVVKTAQLLSS*CSNLNSIPWNLCKK Trigger: CTTTTTACATAGATTCCAAGGAATTGAATTCAAGTTTGAACAGCAAGAGCTTAACAACTGAGCTGTCTTGACAACCCAAACCTTTGCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR CCA 90 bp | GCTCAGTTGTTAAGCTCTTGCTGTTCAAACTTGAATTCAATTCCTTaGAATCTATGTAAAAAGCTGAGTCTGATGGCACATGTTTTAGCT | + |
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Preference number: 1 (lower is better) Translates to: AQLLSSCCSNLNSIP*NLCKKLSLMAHVLA Trigger: AGCTAAAACATGTGCCATCAGACTCAGCTTTTTACATAGATTCCAAGGAATTGAATTCAAGTTTGAACAGCAAGAGCTTAACAACTGAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGATACTATCTCTTTTCTCTCACAGAGGACTTGTGTTCATAGCCCAGCACCTCTCTATGGGTTCATaGCCAGCTTCTACTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: PEILSLFSHRGLVFIAQHLSMGS*PASTPS Trigger: AGAGGGAGTAGAAGCTGGCCATGAACCCATAGAGAG...GTGCTGGGCTATGAACACAAGTCCTCTGTGAGAGAAAAGAGATAGTATCTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGATACTATCTCTTTTCTCTCACAGAGGACTTGTGTTCATAGCCCAGCACCTGCTTGCCTACTCTTaGTCTCTTGTTCCTCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: PEILSLFSHRGLVFIAQHLLAYS*SLVPLL Trigger: CAAGAGAGGAACAAGAGAGCAAGAGTAGGCAAGCAG...GTGCTGGGCTATGAACACAAGTCCTCTGTGAGAGAAAAGAGATAGTATCTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGATACTATCTCTTTTCTCTCACAGAGGACTTGTGTTCATAGCCCAGCACGGCAACAGCCAGGTATaGCTAACTCAGTGTAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: PEILSLFSHRGLVFIAQHGNSQV*LTQCKR Trigger: CCTTTTACACTGAGTTAGGCATACCTGGCTGTTGCC...GTGCTGGGCTATGAACACAAGTCCTCTGTGAGAGAAAAGAGATAGTATCTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGATACTATCTCTTTTCTCTCACAGAGGACTTGTGTTCATAGCCCAGCACTATCTGGCTTTCATATaGACCTGCAAACACTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: PEILSLFSHRGLVFIAQHYLAFI*TCKHSL Trigger: GAGAGAGTGTTTGCAGGTGCATATGAAAGCCAGATA...GTGCTGGGCTATGAACACAAGTCCTCTGTGAGAGAAAAGAGATAGTATCTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGATACTATCTCTTTTCTCTCACAGAGGACTTGTGTTCATAGCCCAGCACGAGGTCAGAGTAACATaGTTGCATGTAAGAACAATA | + |
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Preference number: 2 (lower is better) Translates to: PEILSLFSHRGLVFIAQHEVRVT*LHVRTI Trigger: TATTGTTCTTACATGCAATCATGTTACTCTGACCTC...GTGCTGGGCTATGAACACAAGTCCTCTGTGAGAGAAAAGAGATAGTATCTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGATACTATCTCTTTTCTCTCACAGAGGACTTGTGTTCATAGCCCAGCACATTAAATACCCCATGTaGCTGAACTTGCTACTAGTT | + |
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Preference number: 2 (lower is better) Translates to: PEILSLFSHRGLVFIAQHIKYPM*LNLLLV Trigger: AACTAGTAGCAAGTTCAGGCACATGGGGTATTTAAT...GTGCTGGGCTATGAACACAAGTCCTCTGTGAGAGAAAAGAGATAGTATCTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCCTTCCACCATACCTCACCACACCTCCATAAAACATACACCCCCTTTATCTTGTTCTACTCATTTATaGAAGTGTGGTAATTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: SPSTIPHHTSIKHTPPLSCSTHL*KCGNCS Trigger: GGAACAATTACCACACTTGCATAAATGAGTAGAACA...AGATAAAGGGGGTGTATGTTTTATGGAGGTGTGGTGAGGTATGGTGGAAGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTTCCACCATACCTCACCACACCTCCATAAAACATACACCCCCTTTATCTAAAATGGAATATATCTaGCTTTCATATGCACCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SPSTIPHHTSIKHTPPLSKMEYI*LSYAPA Trigger: TGCAGGTGCATATGAAAGCCAGATATATTCCATTTT...AGATAAAGGGGGTGTATGTTTTATGGAGGTGTGGTGAGGTATGGTGGAAGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGATACTATCTCTTTTCTCTCACAGAGGACTTGTGTTCATAGCCCAGCACGCCAAGGTAACAAAATaGAATATATCTGGCTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: PEILSLFSHRGLVFIAQHAKVTK*NISGFH Trigger: ATGAAAGCCAGATATATTCCATTTTGTTACCTTGGC...GTGCTGGGCTATGAACACAAGTCCTCTGTGAGAGAAAAGAGATAGTATCTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR CAA 90 bp | TGGGTTGTCAAGACAGCTCAGTTGTTAAGCTCTTGCTGTTCAAACTaGAATTCAATTCCTTGGAATCTATGTAAAAAGCTGAGTCTGATG | + |
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Preference number: 2 (lower is better) Translates to: WVVKTAQLLSSCCSN*NSIPWNLCKKLSLM Trigger: CATCAGACTCAGCTTTTTACATAGATTCCAAGGAATTGAATTCAAGTTTGAACAGCAAGAGCTTAACAACTGAGCTGTCTTGACAACCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR GCA 72 bp | AACTCCACTCCACAGTTACCTGGCAACAGCCAGGTATaGCTAACTCAGTGTAAAAGGGACTGCTTGCCTACT | + |
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Preference number: 3 (lower is better) Translates to: NSTPQLPGNSQV*LTQCKRDCLPT Trigger: AGTAGGCAAGCAGTCCCTTTTACACTGAGTTAGGCATACCTGGCTGTTGCCAGGTAACTGTGGAGTGGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR GCA 72 bp | AACAGCCAGGTATGCCTAACTCAGTGTAAAAGGGACTaGTTGCCTACTCTTGCTCTCTTGTTCCTCTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: NSQVCLTQCKRD*LPTLALLFLSC Trigger: GCAAGAGAGGAACAAGAGAGCAAGAGTAGGCAAGCAGTCCCTTTTACACTGAGTTAGGCATACCTGGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCCTTCCACCATACCTCACCACACCTCCATAAAACATACACCCCCTTTATCTATCAGGAGCAAAGGTTaGGGTTGTCAAGACAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: SPSTIPHHTSIKHTPPLSIRSKG*GCQDSS Trigger: TGAGCTGTCTTGACAACCCAAACCTTTGCTCCTGAT...AGATAAAGGGGGTGTATGTTTTATGGAGGTGTGGTGAGGTATGGTGGAAGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR GCA 72 bp | AGTGCTGAGAAGAGCCAAGATGCTTTGATAGGTACTTaGAATGCTGGCAGATGCTGGGAGAAACTAGCATCT | + |
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Preference number: 3 (lower is better) Translates to: SAEKSQDALIGT*NAGRCWEKLAS Trigger: AGATGCTAGTTTCTCCCAGCATCTGCCAGCATTGCAAGTACCTATCAAAGCATCTTGGCTCTTCTCAGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR TCA 72 bp | GTGAAGTTTATGGTAGCACGCTGGGAAGAGAAGTGCTaGGAAGAGCCAAGATGCTTTGATAGGTACTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: VKFMVARWEEKC*EEPRCFDRYLQ Trigger: TTGCAAGTACCTATCAAAGCATCTTGGCTCTTCTCAGCACTTCTCTTCCCAGCGTGCTACCATAAACTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR-3UTR CAA 90 bp | CTTTTCTCTCACAGAGGACTTGTGTTCATAGCCCAGCACAGGTATTGTAGTTATCCTACTCTTGCTCTCTaGTTCCTCTCTTGCTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: LFSHRGLVFIAQHRYCSYPTLAL*FLSCSF Trigger: GAAAGAGCAAGAGAGGAACAAGAGAGCAAGAGTAGG...ATAACTACAATACCTGTGCTGGGCTATGAACACAAGTCCTCTGTGAGAGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR TCA 72 bp | GACTTTTATCCTAGATTTCCTCAGGAACTAAGAGCCTaGGACAGTGAAGAATTGCTACCTGATTTCCCTTAC | + |
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Preference number: 3 (lower is better) Translates to: DFYPRFPQELRA*DSEELLPDFPY Trigger: GTAAGGGAAATCAGGTAGCAATTCTTCACTGTCTCAGGCTCTTAGTTCCTGAGGAAATCTAGGATAAAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR GCA 72 bp | GTTTGGGTTGTCAAGACAGCTCAGTTGTTAAGCTCTTaGTGTTCAAACTTGAATTCAATTCCTTGGAATCTA | + |
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Preference number: 3 (lower is better) Translates to: VWVVKTAQLLSS*CSNLNSIPWNL Trigger: TAGATTCCAAGGAATTGAATTCAAGTTTGAACAGCAAGAGCTTAACAACTGAGCTGTCTTGACAACCCAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR CCA 72 bp | TTAAGCTCTTGCTGTTCAAACTTGAATTCAATTCCTTaGAATCTATGTAAAAAGCTGAGTCTGATGGCACAT | + |
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Preference number: 3 (lower is better) Translates to: LSSCCSNLNSIP*NLCKKLSLMAH Trigger: ATGTGCCATCAGACTCAGCTTTTTACATAGATTCCAAGGAATTGAATTCAAGTTTGAACAGCAAGAGCTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR CAA 72 bp | GCTGGGAAGAGAAGTGCTGAGAAGAGCCAAGATGCTTaGATAGGTACTTGCAATGCTGGCAGATGCTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: AGKRSAEKSQDA*IGTCNAGRCWE Trigger: CTCCCAGCATCTGCCAGCATTGCAAGTACCTATCAAAGCATCTTGGCTCTTCTCAGCACTTCTCTTCCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| CDS-3UTR TCA 90 bp | CCAGAGATACTATCTCTTTTCTCTCACAGAGGACTTGTGTTCATAGCCCAGCACAGTCAGAGTCAGCACTaGAGGCCTGAAGATGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: PEILSLFSHRGLVFIAQHSQSQH*RPEDGA Trigger: AGCACCATCTTCAGGCCTTCAGTGCTGACTCTGACT...GTGCTGGGCTATGAACACAAGTCCTCTGTGAGAGAAAAGAGATAGTATCTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR CAA 72 bp | AGCCAGGTATGCCTAACTCAGTGTAAAAGGGACTGCTaGCCTACTCTTGCTCTCTTGTTCCTCTCTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SQVCLTQCKRDC*PTLALLFLSCS Trigger: AGAGCAAGAGAGGAACAAGAGAGCAAGAGTAGGCAAGCAGTCCCTTTTACACTGAGTTAGGCATACCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| CDS-3UTR TCA 90 bp | CCAGAGATACTATCTCTTTTCTCTCACAGAGGACTTGTGTTCATAGCCCAGCACCTAGTCCAAGAATACTaGAGGCCACAAACAGACCAT | + |
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Preference number: 4 (lower is better) Translates to: PEILSLFSHRGLVFIAQHLVQEY*RPQTDH Trigger: ATGGTCTGTTTGTGGCCTTCAGTATTCTTGGACTAG...GTGCTGGGCTATGAACACAAGTCCTCTGTGAGAGAAAAGAGATAGTATCTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| CDS-3UTR TCA 90 bp | CCAGAGATACTATCTCTTTTCTCTCACAGAGGACTTGTGTTCATAGCCCAGCACATACATTGGAATGTGTaGATCAGCCACATCTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: PEILSLFSHRGLVFIAQHIHWNV*ISHICK Trigger: CTTACAGATGTGGCTGATTCACACATTCCAATGTAT...GTGCTGGGCTATGAACACAAGTCCTCTGTGAGAGAAAAGAGATAGTATCTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| CDS-3UTR CCA 90 bp | CTTTTCTCTCACAGAGGACTTGTGTTCATAGCCCAGCACAGGTATTGTAGTTATTGCTCACAGTATGAATaGGAAACAACAGTGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LFSHRGLVFIAQHRYCSYCSQYE*ETTVVQ Trigger: CTGGACCACTGTTGTTTCCCATTCATACTGTGAGCA...ATAACTACAATACCTGTGCTGGGCTATGAACACAAGTCCTCTGTGAGAGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| CDS-3UTR CCA 90 bp | CCAGAGATACTATCTCTTTTCTCTCACAGAGGACTTGTGTTCATAGCCCAGCACAGACATCAAAGTATATaGTTGGAAGGTGAAACCAGA | + |
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Preference number: 4 (lower is better) Translates to: PEILSLFSHRGLVFIAQHRHQSI*LEGETR Trigger: TCTGGTTTCACCTTCCAACCATATACTTTGATGTCT...GTGCTGGGCTATGAACACAAGTCCTCTGTGAGAGAAAAGAGATAGTATCTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| CDS-3UTR CCA 90 bp | CTTTTCTCTCACAGAGGACTTGTGTTCATAGCCCAGCACAGGTATTGTAGTTATAATGGGAAACAACAGTaGTCCAGTAGAATTTCAACC | + |
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Preference number: 4 (lower is better) Translates to: LFSHRGLVFIAQHRYCSYNGKQQ*SSRIST Trigger: GGTTGAAATTCTACTGGACCACTGTTGTTTCCCATT...ATAACTACAATACCTGTGCTGGGCTATGAACACAAGTCCTCTGTGAGAGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| CDS-3UTR CCA 90 bp | CTTTTCTCTCACAGAGGACTTGTGTTCATAGCCCAGCACAGGTATTGTAGTTATCAAGTAGGTAAAGGTTaGACAGGAGAATGTGAATGT | + |
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Preference number: 4 (lower is better) Translates to: LFSHRGLVFIAQHRYCSYQVGKG*TGECEC Trigger: ACATTCACATTCTCCTGTCCAACCTTTACCTACTTG...ATAACTACAATACCTGTGCTGGGCTATGAACACAAGTCCTCTGTGAGAGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| CDS-3UTR TCA 90 bp | CTTTTCTCTCACAGAGGACTTGTGTTCATAGCCCAGCACAGGTATTGTAGTTATTATATGGTTGGAAGGTaGAACCAGAATATTCCTAAC | + |
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Preference number: 4 (lower is better) Translates to: LFSHRGLVFIAQHRYCSYYMVGR*NQNIPN Trigger: GTTAGGAATATTCTGGTTTCACCTTCCAACCATATA...ATAACTACAATACCTGTGCTGGGCTATGAACACAAGTCCTCTGTGAGAGAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| CDS-3UTR TCA 90 bp | CAAGACAGCTCAGTTGTTAAGCTCTTGCTGTTCAAACTTGAATTCAATTCCTTGGGCAAACAAGATGCCTaGCTCAATACATTGGAATGT | + |
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Preference number: 4 (lower is better) Translates to: QDSSVVKLLLFKLEFNSLGKQDA*LNTLEC Trigger: ACATTCCAATGTATTGAGTCAGGCATCTTGTTTGCC...CAAGGAATTGAATTCAAGTTTGAACAGCAAGAGCTTAACAACTGAGCTGTCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| CDS-3UTR GCA 90 bp | CAAGACAGCTCAGTTGTTAAGCTCTTGCTGTTCAAACTTGAATTCAATTCCTTGCCATGGCAAACAAGATaGCTGACTCAATACATTGGA | + |
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Preference number: 4 (lower is better) Translates to: QDSSVVKLLLFKLEFNSLPWQTR*LTQYIG Trigger: TCCAATGTATTGAGTCAGGCATCTTGTTTGCCATGG...CAAGGAATTGAATTCAAGTTTGAACAGCAAGAGCTTAACAACTGAGCTGTCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| CDS-3UTR GCA 90 bp | CAAGACAGCTCAGTTGTTAAGCTCTTGCTGTTCAAACTTGAATTCAATTCCTTGTTCACAATGGCCATGTaGTCACAGTATGAATGGGAA | + |
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Preference number: 4 (lower is better) Translates to: QDSSVVKLLLFKLEFNSLFTMAM*SQYEWE Trigger: TTCCCATTCATACTGTGAGCACATGGCCATTGTGAA...CAAGGAATTGAATTCAAGTTTGAACAGCAAGAGCTTAACAACTGAGCTGTCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR CAA 72 bp | GGTTTGGGTTGTCAAGACAGCTCAGTTGTTAAGCTCTaGCTGTTCAAACTTGAATTCAATTCCTTGGAATCT | + |
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Preference number: 4 (lower is better) Translates to: GLGCQDSSVVKL*LFKLEFNSLES Trigger: AGATTCCAAGGAATTGAATTCAAGTTTGAACAGCAAGAGCTTAACAACTGAGCTGTCTTGACAACCCAAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR CAA 72 bp | TCAGGAGCAAAGGTTTGGGTTGTCAAGACAGCTCAGTaGTTAAGCTCTTGCTGTTCAAACTTGAATTCAATT | + |
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Preference number: 4 (lower is better) Translates to: SGAKVWVVKTAQ*LSSCCSNLNSI Trigger: AATTGAATTCAAGTTTGAACAGCAAGAGCTTAACAACTGAGCTGTCTTGACAACCCAAACCTTTGCTCCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| CDS-3UTR TCA 90 bp | CAAGACAGCTCAGTTGTTAAGCTCTTGCTGTTCAAACTTGAATTCAATTCCTTGAAAATTTTGGACACTTaGTCTCGAATCTGTTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: QDSSVVKLLLFKLEFNSLKILDT*SRICLV Trigger: GACCAAACAGATTCGAGATCAAGTGTCCAAAATTTT...CAAGGAATTGAATTCAAGTTTGAACAGCAAGAGCTTAACAACTGAGCTGTCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| 3UTR CAA 72 bp | AAGACAGCTCAGTTGTTAAGCTCTTGCTGTTCAAACTaGAATTCAATTCCTTGGAATCTATGTAAAAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: KTAQLLSSCCSN*NSIPWNLCKKL Trigger: CAGCTTTTTACATAGATTCCAAGGAATTGAATTCAAGTTTGAACAGCAAGAGCTTAACAACTGAGCTGTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| CDS TCA 90 bp | GGAGCTACAAACAGGGCTGCTCTGAGTGTGACTCCTACTCCTATTTaGGTGAGGAGTCGCTGGGTAAAGATGGATGCATGTCTTAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: GATNRAALSVTPTPI*VRSRWVKMDACLRG Trigger: TCCTCTAAGACATGCATCCATCTTTACCCAGCGACTCCTCACTCAAATAGGAGTAGGAGTCACACTCAGAGCAGCCCTGTTTGTAGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098194.2 ENSMUST00000215723.2 |
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| CDS-3UTR CAA 90 bp | TCTCCTTCCACCATACCTCACCACACCTCCATAAAACATACACCCCCTTTATCTAGGCTTCGCTCAACTTaGATGACAACTAGGAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: SPSTIPHHTSIKHTPPLSRLRST*MTTRSR Trigger: TCTACTCCTAGTTGTCATCAAAGTTGAGCGAAGCCT...AGATAAAGGGGGTGTATGTTTTATGGAGGTGTGGTGAGGTATGGTGGAAGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| CDS-3UTR CAA 90 bp | CAAGACAGCTCAGTTGTTAAGCTCTTGCTGTTCAAACTTGAATTCAATTCCTTGCTGTTGCTCCAAGCATaGCTAGGAAGAGGTACATGG | + |
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Preference number: 5 (lower is better) Translates to: QDSSVVKLLLFKLEFNSLLLLQA*LGRGTW Trigger: CCATGTACCTCTTCCTAGCAATGCTTGGAGCAACAG...CAAGGAATTGAATTCAAGTTTGAACAGCAAGAGCTTAACAACTGAGCTGTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| CDS-3UTR CAA 90 bp | CAAGACAGCTCAGTTGTTAAGCTCTTGCTGTTCAAACTTGAATTCAATTCCTTGGAGTCTTGCTTCCTTTaGAGGGAGCTTGAAGACCGT | + |
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Preference number: 5 (lower is better) Translates to: QDSSVVKLLLFKLEFNSLESCFL*RELEDR Trigger: ACGGTCTTCAAGCTCCCTCAAAAGGAAGCAAGACTC...CAAGGAATTGAATTCAAGTTTGAACAGCAAGAGCTTAACAACTGAGCTGTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| CDS-3UTR CAA 90 bp | CAAGACAGCTCAGTTGTTAAGCTCTTGCTGTTCAAACTTGAATTCAATTCCTTGCAAAATTTTGGACACTaGATCTCGAATCTGTTTGGT | + |
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Preference number: 5 (lower is better) Translates to: QDSSVVKLLLFKLEFNSLQNFGH*ISNLFG Trigger: ACCAAACAGATTCGAGATCAAGTGTCCAAAATTTTG...CAAGGAATTGAATTCAAGTTTGAACAGCAAGAGCTTAACAACTGAGCTGTCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215723.2 |
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| CDS TCA 72 bp | AGACTCCAAGCCAGGAATCCCAGTCAGAGTCAGCACTaGAGGCCTGAAGATGGTGCTGTTGAGATGGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: RLQARNPSQSQH*RPEDGAVEMGH Trigger: ATGCCCCATCTCAACAGCACCATCTTCAGGCCTTCAGTGCTGACTCTGACTGGGATTCCTGGCTTGGAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098194.2 ENSMUST00000215723.2 |
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| CDS TCA 72 bp | AACAGGGCTGCTCTGAGTGTGACTCCTACTCCTATTTaGGTGAGGAGTCGCTGGGTAAAGATGGATGCATGT | + |
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Preference number: 6 (lower is better) Translates to: NRAALSVTPTPI*VRSRWVKMDAC Trigger: ACATGCATCCATCTTTACCCAGCGACTCCTCACTCAAATAGGAGTAGGAGTCACACTCAGAGCAGCCCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098194.2 ENSMUST00000215723.2 |
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| CDS CAA 72 bp | AAACAGGGCTGCTCTGAGTGTGACTCCTACTCCTATTaGAGTGAGGAGTCGCTGGGTAAAGATGGATGCATG | + |
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Preference number: 6 (lower is better) Translates to: KQGCSECDSYSY*SEESLGKDGCM Trigger: CATGCATCCATCTTTACCCAGCGACTCCTCACTCAAATAGGAGTAGGAGTCACACTCAGAGCAGCCCTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098194.2 ENSMUST00000215723.2 |
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