Pregenerated sensors for OLFR239 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000093884Ensembl transcript IDs: ENSMUST00000112165.4, ENSMUST00000213731.2, ENSMUST00000214406.2
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCATGGCCACTGCCTGGCTCATCTTTAGTTGCCAAGGACCAGCCTaGGCTTGGAGAGAGGTTTTGAGGAAGGGGTATCTGGGAGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: CMATAWLIFSCQGPA*AWREVLRKGYLGAA Trigger: TGCTGCTCCCAGATACCCCTTCCTCAAAACCTCTCTCCAAGCTCAGGCTGGTCCTTGGCAACTAAAGATGAGCCAGGCAGTGGCCATGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGTCCTCATGCTGGTGCAGCATGAGGTACTTACCAACTGAGCCCTATGTTTGCATGGCCACTGCCTaGCTCATCTTTAGTTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: LRSSCWCSMRYLPTEPYVCMATA*LIFSCQ Trigger: TTGGCAACTAAAGATGAGCCAGGCAGTGGCCATGCA...AACATAGGGCTCAGTTGGTAAGTACCTCATGCTGCACCAGCATGAGGACCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGAGATTTGCTTGGGTTTCCAGGTTTTAGGTGACACTCTTCCACTTGCTTCCTGCATGGCCACTGCCTaGCTCATCTTTAGTTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: KEICLGFQVLGDTLPLASCMATA*LIFSCQ Trigger: TTGGCAACTAAAGATGAGCCAGGCAGTGGCCATGCA...GGAAGCAAGTGGAAGAGTGTCACCTAAAACCTGGAAACCCAAGCAAATCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| 3UTR-3UTR CCA 90 bp | TATGTAGATGCTAGTGATGTAACTCAGGTCCTCATGCTGGTGCAGCATGAGGTAGACAATTCTAAAACTTaGGGTATTTTGTCCTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: YVDASDVTQVLMLVQHEVDNSKT*GILSSF Trigger: AAAGGAGGACAAAATACCCCAAGTTTTAGAATTGTC...TACCTCATGCTGCACCAGCATGAGGACCTGAGTTACATCACTAGCATCTACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGAGATTTGCTTGGGTTTCCAGGTTTTAGGTGACACTCTTCCACTTGCTTCCGACAATTCTAAAACTTaGGGTATTTTGTCCTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: KEICLGFQVLGDTLPLASDNSKT*GILSSF Trigger: AAAGGAGGACAAAATACCCCAAGTTTTAGAATTGTC...GGAAGCAAGTGGAAGAGTGTCACCTAAAACCTGGAAACCCAAGCAAATCTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| 3UTR TCA 72 bp | TTGGGGCTGCACATATCCATATGTGCTGTTAAACACTaGGACATAGGACTACAGACTGTGGATAATAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: LGLHISICAVKH*DIGLQTVDNKK Trigger: CTTCTTATTATCCACAGTCTGTAGTCCTATGTCTCAGTGTTTAACAGCACATATGGATATGTGCAGCCCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| CDS-3UTR CCA 90 bp | CTCAGGTCCTCATGCTGGTGCAGCATGAGGTACTTACCAACTGAGCCCTATGTTCGATGGAGTGAAGTGTaGAGAGCAGGTCAGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LRSSCWCSMRYLPTEPYVRWSEV*RAGQPT Trigger: TGTTGGCTGACCTGCTCTCCACACTTCACTCCATCG...AACATAGGGCTCAGTTGGTAAGTACCTCATGCTGCACCAGCATGAGGACCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| CDS-3UTR TCA 90 bp | GTAGATGCTAGTGATGTAACTCAGGTCCTCATGCTGGTGCAGCATGAGGTACTTAACCACGGGGGCTCATaGGCACATTGTATCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VDASDVTQVLMLVQHEVLNHGGS*AHCISV Trigger: CACTGAGATACAATGTGCTCATGAGCCCCCGTGGTT...AAGTACCTCATGCTGCACCAGCATGAGGACCTGAGTTACATCACTAGCATCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| CDS-3UTR CCA 90 bp | GGAGCAGCAAAACAAACAACTCAAAGTCAAATCGTGGGTACAAACTGGCAGCCTCGATGGAGTGAAGTGTaGAGAGCAGGTCAGCCAACA | + |
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Preference number: 4 (lower is better) Translates to: GAAKQTTQSQIVGTNWQPRWSEV*RAGQPT Trigger: TGTTGGCTGACCTGCTCTCCACACTTCACTCCATCG...AGGCTGCCAGTTTGTACCCACGATTTGACTTTGAGTTGTTTGTTTTGCTGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| CDS-3UTR TCA 90 bp | AAAGAGATTTGCTTGGGTTTCCAGGTTTTAGGTGACACTCTTCCACTTGCTTCCAACCACGGGGGCTCATaGGCACATTGTATCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: KEICLGFQVLGDTLPLASNHGGS*AHCISV Trigger: CACTGAGATACAATGTGCTCATGAGCCCCCGTGGTT...GGAAGCAAGTGGAAGAGTGTCACCTAAAACCTGGAAACCCAAGCAAATCTCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| CDS-3UTR CCA 90 bp | CTCAGGTCCTCATGCTGGTGCAGCATGAGGTACTTACCAACTGAGCCCTATGTTGTTAGTAGAAAGGAATaGGTGAAGCCAAATGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LRSSCWCSMRYLPTEPYVVSRKE*VKPNVK Trigger: CTTCACATTTGGCTTCACCCATTCCTTTCTACTAAC...AACATAGGGCTCAGTTGGTAAGTACCTCATGCTGCACCAGCATGAGGACCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| CDS-3UTR TCA 90 bp | GGAGCAGCAAAACAAACAACTCAAAGTCAAATCGTGGGTACAAACTGGCAGCCTAGCGGTCATAACCCATaGCGGTTAGTAGAAAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: GAAKQTTQSQIVGTNWQPSGHNP*RLVERN Trigger: ATTCCTTTCTACTAACCGTCATGGGTTATGACCGCT...AGGCTGCCAGTTTGTACCCACGATTTGACTTTGAGTTGTTTGTTTTGCTGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| CDS-3UTR GCA 90 bp | TATGTAGATGCTAGTGATGTAACTCAGGTCCTCATGCTGGTGCAGCATGAGGTATATTCCTACACCCTTTaGCACCTCCAGTACATTCTC | + |
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Preference number: 4 (lower is better) Translates to: YVDASDVTQVLMLVQHEVYSYTL*HLQYIL Trigger: GAGAATGTACTGGAGGTGGCAAAGGGTGTAGGAATA...TACCTCATGCTGCACCAGCATGAGGACCTGAGTTACATCACTAGCATCTACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| CDS-3UTR GCA 90 bp | AAGAAGGATGGACAGCACATATTCTGCAAAGAGATTTGCTTGGGTTTCCAGGTTTATTCCTACACCCTTTaGCACCTCCAGTACATTCTC | + |
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Preference number: 4 (lower is better) Translates to: KKDGQHIFCKEICLGFQVYSYTL*HLQYIL Trigger: GAGAATGTACTGGAGGTGGCAAAGGGTGTAGGAATA...AACCTGGAAACCCAAGCAAATCTCTTTGCAGAATATGTGCTGTCCATCCTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| CDS-3UTR CCA 90 bp | GATGGACAGCACATATTCTGCAAAGAGATTTGCTTGGGTTTCCAGGTTTTAGGTGTTAGTAGAAAGGAATaGGTGAAGCCAAATGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: DGQHIFCKEICLGFQVLGVSRKE*VKPNVK Trigger: CTTCACATTTGGCTTCACCCATTCCTTTCTACTAAC...ACCTAAAACCTGGAAACCCAAGCAAATCTCTTTGCAGAATATGTGCTGTCCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| CDS-3UTR CAA 90 bp | AAAGAGATTTGCTTGGGTTTCCAGGTTTTAGGTGACACTCTTCCACTTGCTTCCCCACAGAAGGTGAGGTaGAAAATGGCTGTCGTCACC | + |
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Preference number: 5 (lower is better) Translates to: KEICLGFQVLGDTLPLASPQKVR*KMAVVT Trigger: GGTGACGACAGCCATTTTCAACCTCACCTTCTGTGG...GGAAGCAAGTGGAAGAGTGTCACCTAAAACCTGGAAACCCAAGCAAATCTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| CDS-3UTR CAA 90 bp | GTAGATGCTAGTGATGTAACTCAGGTCCTCATGCTGGTGCAGCATGAGGTACTTCTATTCCTACACCCTTaGCCACCTCCAGTACATTCT | + |
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Preference number: 5 (lower is better) Translates to: VDASDVTQVLMLVQHEVLLFLHP*PPPVHS Trigger: AGAATGTACTGGAGGTGGCAAAGGGTGTAGGAATAG...AAGTACCTCATGCTGCACCAGCATGAGGACCTGAGTTACATCACTAGCATCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| CDS-3UTR CAA 90 bp | TTCTGCAAAGAGATTTGCTTGGGTTTCCAGGTTTTAGGTGACACTCTTCCACTTCCACAGAAGGTGAGGTaGAAAATGGCTGTCGTCACC | + |
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Preference number: 5 (lower is better) Translates to: FCKEICLGFQVLGDTLPLPQKVR*KMAVVT Trigger: GGTGACGACAGCCATTTTCAACCTCACCTTCTGTGG...AAGTGGAAGAGTGTCACCTAAAACCTGGAAACCCAAGCAAATCTCTTTGCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| CDS-3UTR CAA 90 bp | AAGAAGGATGGACAGCACATATTCTGCAAAGAGATTTGCTTGGGTTTCCAGGTTCTATTCCTACACCCTTaGCCACCTCCAGTACATTCT | + |
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Preference number: 5 (lower is better) Translates to: KKDGQHIFCKEICLGFQVLFLHP*PPPVHS Trigger: AGAATGTACTGGAGGTGGCAAAGGGTGTAGGAATAG...AACCTGGAAACCCAAGCAAATCTCTTTGCAGAATATGTGCTGTCCATCCTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213731.2 ENSMUST00000214406.2 |
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| CDS GCA 72 bp | CAGGAGGGCTGTGATGCACACTATTCCTACACCCTTTaGCACCTCCAGTACATTCTCTCCGCATGCCAACTT | + |
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Preference number: 6 (lower is better) Translates to: QEGCDAHYSYTL*HLQYILSACQL Trigger: AAGTTGGCATGCGGAGAGAATGTACTGGAGGTGGCAAAGGGTGTAGGAATAGTGTGCATCACAGCCCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112165.4 ENSMUST00000213731.2 ENSMUST00000214406.2 |
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